Database and Motifs High-scoring Motif Occurences Debugging Information



FIMO - Motif search tool

FIMO version 4.12.0, (Release date: Tue Jun 27 16:22:50 2017 -0700)

For further information on how to interpret these results or to get a copy of the FIMO software please access http://meme.nbcr.net

If you use FIMO in your research, please cite the following paper:
Charles E. Grant, Timothy L. Bailey, and William Stafford Noble, "FIMO: Scanning for occurrences of a given motif", Bioinformatics, 27(7):1017-1018, 2011. [full text]


DATABASE AND MOTIFS

DATABASE /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/REST.IDR0.05.filt.narrowPeak.top3000.summitPlusMinus250bp.MemeChipResultsDefaultMax/REST.IDR0.05.filt.narrowPeak.top3000.summitPlusMinus250bp.fa
Database contains 3000 sequences, 1500000 residues

MOTIFS /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/MotifData/motif_databases/CIS-BP/Homo_sapiens.meme (DNA)

MOTIF WIDTH BEST POSSIBLE MATCH
M0085_1.02 10 TCGCCTGAGG
M0104_1.02 11 ATATTAATTAA
M0105_1.02 9 TTTTAATTG
M0108_1.02 11 GATAATATTGA
M0177_1.02 10 ACCATATGTT
M0178_1.02 10 AACAGCTGTT
M0189_1.02 8 GCACGTGA
M0195_1.02 10 ACCATATGGT
M0196_1.02 10 GGCACGTGTC
M0198_1.02 10 AGCCCGTGCG
M0199_1.02 13 TAACGACACGTGC
M0211_1.02 8 GCACGTGT
M0212_1.02 10 GGCACGTGCC
M0214_1.02 9 AACATATGG
M0216_1.02 10 CGCAGCTGTG
M0217_1.02 10 ACCATATGGT
M0300_1.02 10 AATGACGTCA
M0305_1.02 9 GCCACGTGT
M0307_1.02 8 ATACGTTG
M0395_1.02 8 GTACTAAT
M0396_1.02 10 AACGGTAGCA
M0398_1.02 11 AGGAAGTGCAA
M0404_1.02 10 AAGGGGGGCA
M0405_1.02 10 TGGGCGTGGC
M0408_1.02 10 ATGTGCACAT
M0413_1.02 10 GTTGCGGGAC
M0415_1.02 8 ATAACGGT
M0422_1.02 10 CCGGGGGGTC
M0424_1.02 10 TTTGACAGCT
M0428_1.02 8 AGGAGCAC
M0431_1.02 9 ACGGTAGCA
M0432_1.02 9 CGCGCGCAC
M0433_1.02 10 ATCTAGAACA
M0436_1.02 10 TTGTTTATTG
M0437_1.02 9 TATATATAT
M0442_1.02 9 AATGCAGTG
M0443_1.02 10 TGGGCGTGGC
M0594_1.02 9 ATTTGAATT
M0603_1.02 7 TTAGCGG
M0607_1.02 9 GCGTAAATA
M0608_1.02 10 GGGGGCGTAA
M0609_1.02 10 CCCCGCGGCC
M0610_1.02 9 ATCGCGTTA
M0629_1.02 11 AATGTATCAAT
M0630_1.02 10 AATGTATCAA
M0632_1.02 10 AATGTATCAA
M0633_1.02 10 TAATGTATTA
M0635_1.02 13 AACATGTATAAAA
M0714_1.02 10 AACCGGAAGT
M0718_1.02 10 ATGTAAACAA
M0719_1.02 8 GTAAACAA
M0728_1.02 12 AATAAACAAACA
M0736_1.02 8 GTAAACAA
M0737_1.02 10 TATGTAAACA
M0747_1.02 10 AATGTAAACA
M0756_1.02 9 GTAAACAAA
M0887_1.02 9 CCTAATGAG
M0890_1.02 8 GTAATCAA
M0891_1.02 10 TTAATTGGTT
M0892_1.02 10 CCTAATTACC
M0893_1.02 10 GTTAATTAAC
M0894_1.02 8 TTAATTAG
M0896_1.02 8 TTAATTAG
M0897_1.02 10 TTTTATGGGC
M0898_1.02 8 TTACGTAA
M0900_1.02 8 TTAATTGG
M0901_1.02 8 CTTGTCAA
M0905_1.02 9 TTAATTACC
M0906_1.02 10 AATTAATTAG
M0931_1.02 9 TAATTAATT
M0937_1.02 7 TGATACC
M0942_1.02 8 TTGTAATT
M0943_1.02 8 GCTAATTA
M0949_1.02 7 TTAATGA
M0952_1.02 8 TGATACCC
M0958_1.02 7 CTAATTA
M0961_1.02 9 CTAATTGGT
M0969_1.02 9 CCAATCAGC
M0975_1.02 9 TAATTAATT
M0994_1.02 9 ATGATACCC
M0996_1.02 7 GAAATCA
M0999_1.02 9 ATTAATTAC
M1007_1.02 9 TTTATGACC
M1012_1.02 9 TTAATGACC
M1016_1.02 7 GTGATAC
M1018_1.02 7 TAATTAA
M1025_1.02 8 GCTAATTA
M1027_1.02 9 TTAATTACC
M1030_1.02 9 ACCACTTAA
M1034_1.02 7 GCAATTA
M1039_1.02 9 GCTAATTGG
M1049_1.02 10 ATGATACCCC
M1070_1.02 9 TTAATGACC
M1071_1.02 8 TTAATGAC
M1073_1.02 9 TTAATGACC
M1110_1.02 10 GGGCAATAGA
M1125_1.02 10 GCTAATTGGC
M1157_1.02 10 TTTTATGACC
M1163_1.02 9 ATTAATTAC
M1266_1.02 10 GACCGAAACC
M1281_1.02 9 CTTACGCAA
M1358_1.02 9 TAACCCTAG
M1359_1.02 10 GTTTGCGCCA
M1418_1.02 8 TGGTACCA
M1432_1.02 10 ATTGACCTCT
M1458_1.02 10 ACTGACCTCG
M1507_1.02 10 AATTTTGGCT
M1528_1.02 10 CCATGGCAAC
M1529_1.02 10 CCATAGCAAC
M1545_1.02 9 CGTACGTCA
M1581_1.02 10 TTTGCTGACT
M1582_1.02 11 ATATATAATAA
M1583_1.02 8 TTCATTGA
M1589_1.02 10 GCAGAACAAT
M1592_1.02 8 AAAACAAT
M1594_1.02 10 CATTGTTCTT
M1601_1.02 9 ATTGTTCTC
M1605_1.02 10 ATTCATCTTT
M1628_1.02 11 AGGTGTGAAGA
M1668_1.02 12 TCCAAACGAGAT
M1838_1.02 15 CATTGCCTCAGGGCA
M1841_1.02 15 GAACATTCTGTTCTT
M1863_1.02 8 GTAAACAT
M1868_1.02 14 ACAGATAAGAATCT
M1871_1.02 10 TGGGTGGGGC
M1882_1.02 21 AAAGTGAAAGTGAAAGTAAAA
M1884_1.02 15 AGCTAAAAATAGCAT
M1889_1.02 10 AAGCACATGG
M1890_1.02 18 AGAGTGCTGATTGGTCCA
M1906_1.02 11 GGGGGCGGGGC
M1915_1.02 20 GCAAGGCATGATGGGAAATC
M1917_1.02 11 GGTCACGTGGC
M1919_1.02 12 CAAGATGGCGGC
M1925_1.02 11 TATTGTGCAAT
M1926_1.02 9 CAGGTGAGG
M1927_1.02 8 GCCACGTG
M1928_1.02 11 GGGAATTTCCC
M1929_1.02 15 CATGTCTGGGCATGT
M1934_1.02 20 AGGTCAGGGTGACCTGGGCC
M1950_1.02 6 GTGGAT
M1955_1.02 11 TTTCCAGGAAA
M1963_1.02 14 GGGGCCGAGGCCTG
M1968_1.02 11 TCCCTGGGGAC
M1970_1.02 6 TGCCAA
M2065_1.02 15 AGGTCAGGGTGACCT
M2264_1.02 8 GCCATCTG
M2267_1.02 11 TTTTATGGCTT
M2268_1.02 11 TATTGCACAAT
M2270_1.02 11 TAATTTAATCA
M2273_1.02 11 GGGCGGGAAGG
M2275_1.02 13 GAACCAGGAAGTG
M2277_1.02 11 ACAGGAAGTGG
M2278_1.02 11 TGTGACTCATT
M2281_1.02 11 TCCAATCCACA
M2283_1.02 15 CAAAAGTAAACAAAG
M2286_1.02 15 TGGACTTTGGACTCT
M2287_1.02 13 GGCCATAAATCAC
M2289_1.02 13 AAGATGATGTCAT
M2292_1.02 11 GGTGACTCATC
M2296_1.02 15 CTGAGTCAGCAATTT
M2299_1.02 13 AGGGACAGCTGCA
M2301_1.02 15 AAATGGACCAATCAG
M2303_1.02 15 TGACCTCTGACCCCT
M2305_1.02 11 TGCGCAGGCGC
M2306_1.02 13 TTCATTTGCATAT
M2307_1.02 15 AGAAAGTGAAAGTGA
M2310_1.02 15 CAAACCACAAACCCC
M2313_1.02 10 CCATTGTTTT
M2314_1.02 15 GGGAGGGGGCGGGGC
M2319_1.02 14 TTCCTTTGATCTTT
M2321_1.02 20 AGACATGCCCAGACATGCCC
M2323_1.02 15 CAGATCTCGCGAGAG
M2385_1.02 11 AAGTAAACAAA
M2387_1.02 10 GTGGGGTGAT
M2388_1.02 10 ATGGGGTGAT
M2390_1.02 8 CAGGAAGG
M2391_1.02 10 GGGGCGGGGC
M2392_1.02 19 GTTGCCATGGCAACCGCGG
M4344_1.02 8 GGTTGCCA
M4427_1.02 21 GTGGCCACCAGGGGGCGCTGT
M4428_1.02 14 GGAACATTCTGTTC
M4438_1.02 15 AGGTCACGGTGACCT
M4444_1.02 14 AGGGGATTTCCCAG
M4451_1.02 11 GGTCACGTGAC
M4452_1.02 15 TCTCGATATGACTCA
M4453_1.02 15 AAGAGGAAGTGAAAC
M4454_1.02 15 AAATCTCGCGAGAAC
M4459_1.02 20 GTGCGGGGGCGGGGGGGGGG
M4461_1.02 21 GCCTTCTGGGAATTGTAGTTC
M4462_1.02 11 CGCCGGAAGTG
M4463_1.02 18 AATGTGGAAATGAGTCAG
M4467_1.02 15 ATGCCAAAAATAGCA
M4469_1.02 14 TCCATGGTGCTGAA
M4471_1.02 15 GCAGCCAAGCGTGAC
M4473_1.02 15 GCCGGCCAATCAGAG
M4476_1.02 15 TCACCTGTTGCTAGG
M4477_1.02 19 CCATGGCCATATAAGGCAA
M4478_1.02 20 CAGGTGATTTCCGGGAAATG
M4479_1.02 11 GCAGCAGCTGT
M4481_1.02 15 GGTCACGTGGCCCGG
M4484_1.02 15 CTGGGAATTGTAGTC
M4509_1.02 17 ATTTGCATAACAAAGGA
M4511_1.02 8 TGACCTCT
M4522_1.02 10 CCGGAAGTGG
M4525_1.02 15 AGCCTCAGGGCATGG
M4526_1.02 15 GGGGGGTGACTCATC
M4527_1.02 21 GGACTACAACTCCCAGCAGGC
M4532_1.02 10 CCACGTGCTC
M4536_1.02 15 GGGGAGGGCGCGCGG
M4537_1.02 15 GGCGGGAAATTTGAA
M4543_1.02 11 GGAACCACGTG
M4545_1.02 15 AGAAAGTGAAAGTGA
M4551_1.02 17 TTCATACTGGAGAGAAA
M4553_1.02 10 GGTCACGTGC
M4565_1.02 14 CAGGATGAGTCACC
M4567_1.02 15 GCAAAGTAAACAGAG
M4569_1.02 18 GTCCCGGGTTCGAATCCC
M4572_1.02 15 TGCTGACTCAGCAAA
M4600_1.02 11 GCAGATAAGGA
M4604_1.02 21 GGGGAGGAGGGAGGGGAGGAG
M4612_1.02 15 CCGCCAGGGGGCGCC
M4619_1.02 11 GGGTGACTCAT
M4623_1.02 15 CGGTGACTCATCCTT
M4629_1.02 17 CATGACTCAGCAATTTT
M4635_1.02 15 GAAAATGAAACTGAA
M4636_1.02 21 CTGCCCTCATCCAAGATGGCG
M4640_1.02 15 GGGCGGGGGTCTCGG
M4665_1.02 15 CAGATAAGAATCTGT
M4680_1.02 8 GTCACGTG
M4681_1.02 10 TGCTGAGTCA
M4692_1.02 10 ACTACAACTC
M4698_1.02 15 CTGGACTTTGGACTC
M4702_1.02 8 TGACCTTT
M4708_1.02 10 TATGCAAATA
M4840_1.02 11 AAATGCGCAAC
M4850_1.02 21 TGTTGTGTCCGTGCCATCTGG
M4930_1.02 11 AAATCGTGACT
M4971_1.02 10 GTAACAGCTG
M5116_1.02 9 ACCACCTGT
M5209_1.02 11 GTGGGCGTGGC
M5234_1.02 10 GGTCACGTAC
M5284_1.02 10 GCTAATTAGC
M5287_1.02 13 CTAATTAAATTAA
M5291_1.02 13 TTAATTTAATTAA
M5292_1.02 13 GGATGATGCAATA
M5293_1.02 14 CGATGACGTCATCG
M5294_1.02 10 GTTAAACGGT
M5300_1.02 17 TAATCGGTATTTAATTG
M5302_1.02 14 TGATGACGTCATCA
M5303_1.02 17 TGCTTTCTAGGAATTCA
M5304_1.02 10 ACCATATGGT
M5307_1.02 12 AAACATATGTTT
M5308_1.02 10 ACCATATGTT
M5310_1.02 8 TTAATTGG
M5320_1.02 15 CCCGCATACAACGAA
M5321_1.02 10 AACACGTGTT
M5322_1.02 8 TTTTTATT
M5323_1.02 14 TGATGACGTCACCG
M5325_1.02 14 TGATGACGTGGCAT
M5335_1.02 18 ATCGATAATTTTATCGAT
M5339_1.02 10 GATAATTAGG
M5342_1.02 8 GTAATTGG
M5343_1.02 8 ATAATTAC
M5344_1.02 8 GTAATTGG
M5345_1.02 10 GTTAATCCGC
M5346_1.02 10 GCTAATCCGT
M5348_1.02 13 CTAATCTAATTAA
M5349_1.02 13 CTAATTTAATCAA
M5363_1.02 12 TTTCCCGCCAAA
M5377_1.02 12 AACCCGGAAGTG
M5388_1.02 10 GCTAATTAGC
M5390_1.02 10 GCTAATTGGG
M5394_1.02 10 GTTAATTGGA
M5398_1.02 10 ACCGGAAGTG
M5414_1.02 10 GTTAATTGGT
M5420_1.02 10 ACCGGAAGTA
M5421_1.02 11 AACCGGAAATA
M5422_1.02 10 ACCGGAAGTG
M5425_1.02 15 CCGGAAGCGGAAGTG
M5427_1.02 10 GCTAATTACC
M5428_1.02 10 GCTAATTACC
M5430_1.02 10 ACCACCTGTT
M5435_1.02 14 TCGCTGTGTCATTC
M5445_1.02 14 AGTAAATATTTTTT
M5446_1.02 7 GTAAACA
M5460_1.02 7 GTAAACA
M5471_1.02 14 GTAAACATGTTTAC
M5480_1.02 10 GCTAATTAGT
M5481_1.02 10 GCTAATTGGT
M5487_1.02 10 TATGCGGGTA
M5490_1.02 16 GCTTCGTGGGGGGTCT
M5491_1.02 14 CTTCGCGGGGGGTC
M5493_1.02 8 GTACGTAA
M5497_1.02 17 AACCGGTTTAACCGGTT
M5500_1.02 10 GCTAATCCCC
M5501_1.02 10 CCTAATCCGC
M5502_1.02 10 TTTAATTAGG
M5503_1.02 10 TTTAATTAGT
M5504_1.02 12 TGGCACGTGCCG
M5506_1.02 12 TGGCACGTGCCA
M5509_1.02 10 GGCACGTGTC
M5512_1.02 9 GGTGGGCAT
M5517_1.02 10 ACTAGTTAAC
M5518_1.02 11 TTTTAATTGCT
M5519_1.02 11 TTTTAATTGGT
M5520_1.02 11 TGTTAATTGCT
M5530_1.02 12 TATAATCGTTTT
M5541_1.02 10 GTTAATTACT
M5542_1.02 10 GCTAATTAGT
M5543_1.02 10 CTTAATTAGT
M5544_1.02 10 TTTTTATGGG
M5547_1.02 11 GGTCGTAAAAT
M5551_1.02 9 TTTTATTAC
M5553_1.02 10 CCAATAAAAA
M5555_1.02 10 GTCGTAAAAA
M5557_1.02 9 GTAATAAAA
M5563_1.02 10 GCTAATTAGC
M5567_1.02 13 GAACGTTCTAGAA
M5568_1.02 15 TTCGAAACGTTCGAA
M5571_1.02 10 GACAGGTGTA
M5581_1.02 12 CATGTCATGTAA
M5582_1.02 12 CATGTCATGTAA
M5583_1.02 8 TTAAGTGC
M5584_1.02 13 TTAATCTAATTAA
M5587_1.02 9 ATGACTCAT
M5591_1.02 18 CAAAAAGGGGCGTGGCAT
M5592_1.02 14 AAGGGGGCGTGGCC
M5593_1.02 11 GGGGGCGTGGC
M5594_1.02 13 CTCGACCTAATTA
M5602_1.02 8 TTAATTGG
M5604_1.02 8 TTAATTAA
M5605_1.02 8 TTAATTAA
M5616_1.02 12 GCTATAAATAGC
M5621_1.02 8 CCTGTCAA
M5623_1.02 10 GCTAATTAAC
M5624_1.02 10 AGTAATTAAC
M5627_1.02 10 CACAGGTGTT
M5628_1.02 8 AGGTGTGA
M5631_1.02 10 GTTAATTAGA
M5632_1.02 10 ATCACGTGAT
M5634_1.02 10 ACCACGTGCC
M5635_1.02 10 TTTAATTACC
M5636_1.02 10 AACAGCTGTT
M5637_1.02 18 TAATTGGTTTTTAATTGC
M5643_1.02 12 ACCGTTAAACGG
M5652_1.02 10 GCCATATGGT
M5653_1.02 10 GACATATGTT
M5660_1.02 15 TTGGCACGGTGCCAA
M5662_1.02 15 TTGGCACAGTGCCAG
M5664_1.02 15 TTGGCACCGTGCCAA
M5672_1.02 10 GCTAATTAGC
M5689_1.02 11 AATTTGCTGAC
M5690_1.02 10 AACATATGTT
M5691_1.02 10 ACCATATGTT
M5693_1.02 10 ACCATATGTT
M5697_1.02 14 ATTATTGATTTTTT
M5702_1.02 17 TGCAGTCATGCGTGACG
M5704_1.02 10 TAATCGATTA
M5705_1.02 8 CTAATTAG
M5709_1.02 10 TAATCGATTA
M5711_1.02 17 TGCAGTCATGCGTGACG
M5714_1.02 11 TAATTTAATTA
M5715_1.02 11 TAATTTAATTA
M5717_1.02 9 CTTAATCCC
M5720_1.02 9 CTTAATCCC
M5722_1.02 12 TGACACCTGTCA
M5729_1.02 9 ATTTGCATA
M5735_1.02 13 AAATTAGCATAAT
M5738_1.02 9 ATTTGCATA
M5740_1.02 14 ATGAATAATTAATG
M5743_1.02 16 ATGCATAATTAATGAG
M5744_1.02 9 ATTTGCATA
M5746_1.02 10 ATAATGAGCT
M5750_1.02 13 GGGGGCCTTGAAA
M5753_1.02 12 CAAGACGCCTTA
M5771_1.02 10 GTTAATTGGC
M5772_1.02 8 TTAATTGG
M5777_1.02 16 CGTTGCCATGGCAACG
M5782_1.02 9 GGATAATCC
M5804_1.02 15 GAGCAACAGGTGGTT
M5805_1.02 13 ATGCAACAGGTGG
M5807_1.02 8 TTAATTGG
M5815_1.02 12 ACAATAACATTG
M5825_1.02 15 AACACTACCATTGTT
M5835_1.02 16 AACAATGTTCATTGTT
M5838_1.02 16 AACAATGTGCAGTGTT
M5856_1.02 12 AGTGGGCGTGGC
M5857_1.02 11 ACCCGGATGTA
M5865_1.02 14 AAAAAGAGGAAGTA
M5873_1.02 10 AGGTGTGAAA
M5875_1.02 20 AGGTGTGAAAAAAGGTGTGA
M5880_1.02 19 AGGTGTGAAATTCACACCT
M5882_1.02 20 TTTCACACCTAGGTGTGAAA
M5883_1.02 16 TCACACCTTCACACCT
M5889_1.02 16 GGTGTGAATTCACACC
M5896_1.02 8 AGGTGTGA
M5903_1.02 12 AAAGATCAAAGG
M5932_1.02 10 GTCACGTGAT
M5934_1.02 12 TGACAGCTGTCA
M5935_1.02 12 TGACAGCTGTCA
M5941_1.02 13 CTAATTTAATTAG
M5944_1.02 8 CTAATTAC
M5945_1.02 8 CTAATTAC
M5949_1.02 8 CTAATTAT
M5955_1.02 11 TAATGGCGGAC
M5958_1.02 13 TATGTCGCGATAG
M5959_1.02 17 TTTCGCCTGGCACGTCA
M5962_1.02 12 TTCGGTGGTCGC
M5965_1.02 15 GCACAGCGGGGGGTC
M5967_1.02 19 ATGTTAAATGTAGATTAAG
M5970_1.02 17 GTCGTGTTGTGGGAAAG
M5971_1.02 14 TCGAGGCTAGACCA
M5972_1.02 17 GAGTATTATGGGATGGA
M5973_1.02 18 AGGTGTTCTGTTAACACT
M5974_1.02 12 GGGTTCGAGGGT
M5976_1.02 17 TTCGTGGCATTTTTCTA
M5977_1.02 10 GTGGGGGGGG
M5979_1.02 12 TGTGGGAAAAGC
M5980_1.02 10 AGGTAGGTAC
M5981_1.02 15 TTTTCAGTGTGTGCA
M5998_1.02 12 GGTGACGTCATT
M6037_1.02 12 TTTGTCATGTAG
M6111_1.02 13 AGAAAGGGTTAAT
M6114_1.02 10 AAAGCAAACA
M6115_1.02 15 CATGTCTGGGCATGT
M6119_1.02 15 AAAAAGAGGAAGTGG
M6123_1.02 15 GGGGTGGGGGAGGGG
M6131_1.02 21 CCGGTTCAAACCGGTTCTGGC
M6139_1.02 9 GCACGCAAC
M6140_1.02 18 ATTGGTTTTATTGGTTAA
M6141_1.02 12 TAATCCAATTAT
M6144_1.02 10 GCCCCCGGGC
M6146_1.02 14 ACGCGCCTCGGGCG
M6147_1.02 22 TTTAATTTGATTTCGATTAATT
M6149_1.02 13 GGTTGGTATTGTG
M6150_1.02 12 GCCTCCCACGCC
M6151_1.02 8 TCACGTGC
M6152_1.02 10 GTGACGTCAC
M6154_1.02 12 TAAGGAAGAAGG
M6155_1.02 12 GTGGTGACGTGG
M6157_1.02 10 TCATTAATTG
M6159_1.02 16 TTCCTAGAAAGCTTTT
M6161_1.02 20 ACCGGGTCACGTGCAGAGGG
M6162_1.02 14 GGGTCACGTGTCCA
M6163_1.02 12 TTTGTTGTGTTC
M6164_1.02 25 ACATAGTGACACCTAGGTGTGAAAT
M6166_1.02 15 ATTATGTTAAATCCC
M6167_1.02 8 ACATAAAT
M6171_1.02 11 AATTGTGCAAT
M6172_1.02 12 AAGATTGCGCAA
M6173_1.02 13 CAGATTGCAAAAT
M6174_1.02 11 AGCCAATCAGC
M6176_1.02 12 TGACCTTTGACC
M6180_1.02 9 GTGACGTCA
M6181_1.02 11 CACTGACGTCA
M6182_1.02 8 CTAATCCC
M6184_1.02 14 AGGGGGATCGATGG
M6185_1.02 7 CGTTGGC
M6186_1.02 11 TGTTACATAAC
M6187_1.02 13 GGGGATTGCATTT
M6188_1.02 8 ATAATTAT
M6189_1.02 10 GATAATTACA
M6191_1.02 10 GGCGCGAAAC
M6192_1.02 10 CGCGCGAAAC
M6194_1.02 10 CGCGCCAAAC
M6196_1.02 13 TAGGGCGCGAAAC
M6197_1.02 9 CGTGACGTC
M6199_1.02 11 GGCGTGGGCGG
M6200_1.02 11 AGAGTGGGTGT
M6201_1.02 11 GGCGGCAGGGC
M6204_1.02 15 TAGCAGGAAGTGAGT
M6205_1.02 14 GGCAAACAGGAAAT
M6206_1.02 11 ATAAGGAAGTA
M6207_1.02 9 ACCGGAAGT
M6208_1.02 12 CCCAGGAAGTGC
M6210_1.02 13 TGCCCACGTGGTG
M6211_1.02 14 CGGGGATACGAAAT
M6212_1.02 13 CCCACGTACGCAC
M6213_1.02 11 ACCGGAAATCC
M6215_1.02 9 TGACCTTGA
M6216_1.02 9 TGACCTTGA
M6221_1.02 11 GCGGGAAGTGG
M6222_1.02 8 CAGGAAGT
M6223_1.02 13 GACAGGAAGTAAC
M6224_1.02 17 GCCACAGGAAGTAACAC
M6225_1.02 16 AAGATAAGATAAGATA
M6226_1.02 10 CAGGAAATAA
M6228_1.02 10 CTGACTCATC
M6234_1.02 13 GCAAAGCAAACAA
M6235_1.02 15 CTTAAGTAAACAACG
M6236_1.02 15 TCTGGCAAAACAAAC
M6237_1.02 9 AAACAAACA
M6238_1.02 11 AAAATAAACAT
M6239_1.02 11 AAAAGTAAACA
M6240_1.02 12 GACCAATCAGAG
M6241_1.02 10 TAAATAAACA
M6242_1.02 13 TAAACAAAAACAA
M6244_1.02 13 AAAAACAAACAAC
M6245_1.02 16 AAAAAGTAAACAAACC
M6246_1.02 13 AGGTAAACAAACA
M6247_1.02 9 AATAAACAA
M6249_1.02 9 AAACAAATT
M6250_1.02 12 AAATAAACAATG
M6251_1.02 12 TTGTGTTTTTTT
M6256_1.02 9 ACAGATAAC
M6257_1.02 17 TAAGAGATAACTTAGAT
M6258_1.02 7 AAGATAA
M6259_1.02 14 CACATGCGGGTATT
M6262_1.02 11 TGCAGTGATTT
M6263_1.02 10 GCTGTGATTT
M6264_1.02 11 CTGGGTGGTCT
M6265_1.02 11 GTGGGTGGTCT
M6266_1.02 11 CTGGGTGGTCC
M6267_1.02 10 GTGGGGGGTA
M6268_1.02 12 AATGCCAGACGC
M6269_1.02 9 ACTCATTGA
M6270_1.02 20 AGGGACGCAGCTGCTCCCCA
M6271_1.02 13 GGGCTCGTGGCGG
M6272_1.02 16 AGGCCACGTGCCGGAT
M6273_1.02 17 GGGGGCACGTGGCATTA
M6274_1.02 9 GGGTTGCCC
M6275_1.02 12 GCGTACGTGCGG
M6276_1.02 16 GCGCTAGCGGACGTTA
M6277_1.02 13 CTGTTACGTAATC
M6278_1.02 12 TAGGGCTGCAAA
M6279_1.02 7 AAAATAC
M6280_1.02 15 AATAATCGCGAATAT
M6281_1.02 15 GGTTAATTATTAACC
M6282_1.02 14 GTTAATCATTAACC
M6285_1.02 14 TTTATTGATTTTTT
M6287_1.02 14 AGAATGTTCTAGAA
M6289_1.02 12 TCATAAATCATC
M6290_1.02 11 CCAATAAAACC
M6291_1.02 10 CATCCATCAA
M6292_1.02 10 CATTAATCAA
M6293_1.02 15 TCCAATCTATTGATT
M6295_1.02 10 CCATCCATCA
M6296_1.02 13 TGCATCAATCATT
M6297_1.02 10 CATTAATCAA
M6298_1.02 11 GCATTAATCAA
M6299_1.02 15 AAAGTAATAAATCAT
M6300_1.02 14 GGGCATCAATCAAA
M6301_1.02 10 AATTAAAGCA
M6302_1.02 11 TCCCTAATAAA
M6303_1.02 8 TTAATTGA
M6304_1.02 10 CCATTAAACT
M6306_1.02 12 TGTCAGGGGGCA
M6308_1.02 14 GGAAAGTGAAAGCA
M6309_1.02 17 GGAAAGCGAAACTGAAA
M6311_1.02 20 TAAAGGAAAGCCAAAAGTGA
M6312_1.02 10 GAAAGTGAAA
M6313_1.02 15 GAGAAAGTGAAACTG
M6314_1.02 12 GAAAGCGAAACT
M6315_1.02 7 GTTAATG
M6316_1.02 9 CCAGGTGCA
M6321_1.02 17 GGCGGGGAGGTGGGGGC
M6322_1.02 11 CAGGGTGTGGC
M6323_1.02 15 TGCCTGGGTGTGGCT
M6324_1.02 10 TGGGCGGGGC
M6325_1.02 8 GGGGGCGG
M6326_1.02 9 CAGGGGGTG
M6327_1.02 7 CTTTGAT
M6328_1.02 13 CACTTTTAATTAG
M6329_1.02 13 AAAATTAATTAAT
M6330_1.02 21 GTGCTGACCCCGCAGCCTTCG
M6331_1.02 9 TGCTGACGG
M6332_1.02 8 TTGCTGAC
M6333_1.02 7 CATGACT
M6336_1.02 17 GGGGGGGGGAGGGAGGG
M6337_1.02 11 GGGGCCGGAGG
M6338_1.02 17 TACAACAACCTGTTCTT
M6339_1.02 7 CTCCGGG
M6342_1.02 12 GCTAAAAATAGC
M6343_1.02 13 CATAAAACTGTCA
M6344_1.02 13 TGACAGCTGTCAA
M6345_1.02 10 ATCACATGAC
M6346_1.02 19 CCACGGCGGTGTCACATGC
M6347_1.02 7 TAATTGT
M6348_1.02 17 AGTGCCGTGTGCAAAAC
M6349_1.02 10 TCAACCTGCA
M6350_1.02 7 CAGTTGG
M6352_1.02 8 CCACGTGG
M6353_1.02 7 GCAGCTG
M6354_1.02 9 GACAGCTGC
M6355_1.02 13 TGACAGCTGCTGC
M6356_1.02 9 GGTGGGGAA
M6357_1.02 8 TTTAATGG
M6358_1.02 12 CGGCAGATGGCC
M6359_1.02 7 AATGACT
M6360_1.02 12 CATGACTCAGCA
M6361_1.02 13 ATGGAAATTTCCA
M6363_1.02 9 AATTTTCCA
M6364_1.02 9 AGTTTTCCA
M6365_1.02 10 AAATTTTCCT
M6366_1.02 15 CATGGAGTTTTCCAC
M6368_1.02 14 ATGCATTACATAAC
M6370_1.02 11 GGAATCTCCCT
M6373_1.02 14 CAGCCAATCAGCGC
M6374_1.02 10 CTCAAGTGCT
M6375_1.02 12 AAACCACTTAAA
M6376_1.02 7 TCAAGTG
M6377_1.02 9 TTCAAGGAC
M6378_1.02 13 AATAAGTATATAA
M6379_1.02 11 AGTTAAGTGGA
M6380_1.02 9 CTAATTGGT
M6381_1.02 10 TCTCCCACGC
M6382_1.02 14 TCTGACCTACTTTT
M6383_1.02 19 CGTTGACCTTTGACCTTTA
M6384_1.02 14 AGGTCATTGACCCT
M6385_1.02 19 CTGAACTTTTTTGACCTCA
M6387_1.02 18 CTGAACTTTCCTGACCCC
M6389_1.02 13 CTGACCTCTGGCC
M6391_1.02 14 TGACTTTTGACTTT
M6392_1.02 18 TCAAGTGAACTTTGTCCT
M6393_1.02 9 GTGACCTTT
M6394_1.02 9 GTGACCTTT
M6395_1.02 10 CTGACCTTTG
M6396_1.02 10 TGGCCTTGAA
M6397_1.02 13 TGACCTTGAACTT
M6399_1.02 21 GTCTTGTTATTGATTTTTTTT
M6400_1.02 8 CTAATCCT
M6401_1.02 15 CTTTAATCCCTTAAC
M6402_1.02 9 TGTAACTGT
M6406_1.02 18 GTTCAGTCATGCGTGACA
M6410_1.02 11 TCAAGCGTGAA
M6411_1.02 14 GTCACTGAAGCGGG
M6412_1.02 15 CCCATCAATCAAATT
M6413_1.02 15 CCATCAATCAATTTA
M6415_1.02 9 CTAATTACC
M6416_1.02 11 TCTGTGGTTTG
M6417_1.02 13 ATATATTCATGAG
M6418_1.02 10 TTTAATCCCA
M6419_1.02 13 CATCAATCAAGCT
M6420_1.02 17 GGGGGCATCAGGAGGGG
M6422_1.02 10 CGGGGGGCCC
M6423_1.02 9 ATTTGCATA
M6425_1.02 14 TTTGCATTACAATG
M6426_1.02 10 CATAAATAAT
M6427_1.02 13 CAGCTCATTAATA
M6429_1.02 13 CATAATTTATGCA
M6430_1.02 7 TGACCTT
M6432_1.02 14 TGACCTTTGTCCTA
M6433_1.02 18 GTGACCTTTGACCTACTT
M6436_1.02 13 TACAGACTGTTCT
M6438_1.02 15 GAGTAATTAATATAA
M6439_1.02 7 TAATCTG
M6440_1.02 7 TTAATTG
M6441_1.02 21 GGACAGCTGTTCTGTTTCCTG
M6442_1.02 17 CCCTGCCCCCCCCTTCC
M6443_1.02 7 TGACCTC
M6445_1.02 11 GCCCTGACCTC
M6446_1.02 20 GTGACCTCTGGGTGACCCCC
M6448_1.02 12 GGGGGATTTCCC
M6449_1.02 12 TGGGGATTTCCC
M6451_1.02 12 GTTGCCAGGGAA
M6453_1.02 14 TTACCATGGCAACC
M6454_1.02 12 TGACCTAGTTTT
M6455_1.02 13 CTGACCTACTTTT
M6456_1.02 22 GGGGGGGGGGGTGGTTTGGGGT
M6457_1.02 10 TAACCACAAA
M6459_1.02 14 AACCACAAACCCCA
M6461_1.02 10 TGTGACCTCA
M6462_1.02 13 GTGACCTTTGACC
M6463_1.02 12 AGCCTGTCTGCC
M6464_1.02 11 GTGTCCGTCTG
M6465_1.02 10 GTGTCTGGCC
M6466_1.02 9 TGTCTGGCC
M6468_1.02 8 CCAGGTGG
M6469_1.02 7 CCAGGTG
M6470_1.02 7 TCTTTGT
M6471_1.02 8 CATTGTTC
M6472_1.02 7 CATTGTT
M6473_1.02 18 CAACAATCTTCATTGTCC
M6474_1.02 19 GGAAAAGAACAATGGGTTC
M6475_1.02 16 ATTTGCATAACAATGG
M6476_1.02 12 GAGAACAAAGCG
M6477_1.02 8 TAACAATA
M6478_1.02 11 AGAACAATGGG
M6482_1.02 20 GGGGGGGGGCGGGGCCGGGG
M6483_1.02 24 GGGGCCAGGGGGGGGGCGGGGCCG
M6485_1.02 12 AAAAAGAGGAAG
M6486_1.02 16 CGGCTGTTACCCTGGG
M6490_1.02 9 AAAACAAAA
M6491_1.02 12 TTTCCAGGAATT
M6492_1.02 13 TTTTCTGGGAATT
M6496_1.02 13 TTTCCCAGAAAAG
M6497_1.02 13 TTCCCAGGAATTT
M6498_1.02 9 TGACCTTGA
M6499_1.02 9 CGTGGGAAA
M6500_1.02 12 GACCATCTGTTC
M6503_1.02 25 GTCGCTTCTCACACCTCTGATGGCA
M6504_1.02 24 AGGTAGAGAATTAGGTGATAAAAA
M6505_1.02 8 AGGTGTGA
M6506_1.02 12 GCGCTTTGTTCT
M6507_1.02 14 CACATTCCTGCGCC
M6508_1.02 15 GATATTTCTGCTCTA
M6509_1.02 12 AAAAATAGCCCT
M6510_1.02 14 TGTTTATGTAAATG
M6513_1.02 11 GCCAGCTGCGG
M6514_1.02 16 GCCTGAACTGGCCAGA
M6515_1.02 14 AAATGGCGGGAAAC
M6516_1.02 11 GACCATCTGGT
M6517_1.02 10 GGTCATGTGG
M6518_1.02 9 GGTCACGTG
M6519_1.02 16 CAGGTGACACCTGACA
M6521_1.02 10 CTGACCTGAG
M6523_1.02 17 TGACCTGACCTGACCTC
M6525_1.02 11 CGCCAAGGAGC
M6527_1.02 10 CCCCAGGTGG
M6529_1.02 7 TCTCTGG
M6532_1.02 7 TGACCTC
M6534_1.02 11 TTAGCTAATTA
M6535_1.02 13 GCGGGGGCGGGGG
M6536_1.02 12 GACGTGTCATTA
M6537_1.02 11 GGGGATTGGCC
M6539_1.02 22 CGGAGAGGGGGAGGGGGGGGGC
M6540_1.02 15 CAATAGCGGTGGTGG
M6542_1.02 13 AGATGATAGAGCC
M6544_1.02 12 GGGGATTTCCCA
M6545_1.02 14 GGTAGGGAAACCCC
M6546_1.02 11 ATTAATAATTA
M6547_1.02 19 GGGGGCCCCAGGCCTCGGC
M6548_1.02 9 GGGGTGGTC
M6549_1.02 9 GGGGTGGTC
M6550_1.02 9 TGGGTGGTC
M6552_1.02 15 GGGGTGGGGGAGGGG
M6553_1.02 12 GAGGGGGGCGGA
M6554_1.02 14 TCCAGATGTTTCGG
M6555_1.02 9 CGATAATGA
M6556_1.02 24 GGGCAACAAATCCCTGCGCCCCGT
M6557_1.02 12 GGAAAAAATCGG
M6558_1.02 15 GCACCCTTGGGTGCC
M6559_1.02 16 CCCACGGTTACTGCCG

Random model letter frequencies (/srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/REST.IDR0.05.filt.narrowPeak.top3000.summitPlusMinus250bp.MemeChipResultsDefaultMax/background):
A 0.245 C 0.255 G 0.255 T 0.245


SECTION I: HIGH-SCORING MOTIF OCCURENCES

Motif ID Alt ID Sequence Name Strand Start End p-value q-value Matched Sequence
M6339_1.02 MECP2 chr11 + 1390841 1390847 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr1 + 2468302 2468308 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr17 + 3668068 3668074 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr3 + 5188392 5188398 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr5 + 5422297 5422303 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr1 + 5847704 5847710 6.7e-05 0.707 ctccggg
M6339_1.02 MECP2 chr4 + 6225567 6225573 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr5 + 6328456 6328462 6.7e-05 0.707 ctccggg
M6339_1.02 MECP2 chr1 + 10794019 10794025 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr6 + 11094032 11094038 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr19 + 12832842 12832848 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr8 + 13132184 13132190 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr3 + 14398662 14398668 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr19 + 17109104 17109110 6.7e-05 0.707 ctccggg
M6339_1.02 MECP2 chr20 + 17227756 17227762 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr19 + 17688459 17688465 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr19 + 18233676 18233682 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr12 + 22046641 22046647 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr16 + 22813392 22813398 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr2 + 25342384 25342390 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr22 + 26170933 26170939 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr2 + 26244421 26244427 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr2 + 26244460 26244466 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr2 + 26244781 26244787 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr3 + 28348754 28348760 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr17 + 29390091 29390097 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr17 + 29390178 29390184 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr22 + 30802713 30802719 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr18 + 34977272 34977278 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr19 + 35495467 35495473 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr14 + 35535277 35535283 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr14 + 35535367 35535373 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr9 + 35658469 35658475 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr19 + 35717371 35717377 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr19 + 36666916 36666922 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr17 + 36704042 36704048 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr9 + 37027727 37027733 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr14 + 37172152 37172158 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr19 + 37654942 37654948 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr1 + 37795568 37795574 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr1 + 38047699 38047705 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr1 + 38047743 38047749 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr19 + 38649511 38649517 6.7e-05 0.707 ctccggg
M6339_1.02 MECP2 chr22 + 38917125 38917131 6.7e-05 0.707 ctccggg
M6339_1.02 MECP2 chr19 + 39446011 39446017 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr19 + 40218330 40218336 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr19 + 40530914 40530920 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr19 + 41997429 41997435 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr20 + 42180002 42180008 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr22 + 42294538 42294544 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr19 + 42313600 42313606 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr10 + 43283093 43283099 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr17 + 44308778 44308784 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr17 + 44947919 44947925 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr19 + 45496613 45496619 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr11 + 45885555 45885561 6.7e-05 0.707 CTccggg
M6339_1.02 MECP2 chr20 + 46029556 46029562 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr11 + 46392675 46392681 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr19 + 47407119 47407125 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr19 + 47472116 47472122 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr2 + 47571405 47571411 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr15 + 48331628 48331634 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr19 + 49149682 49149688 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chrX + 49199913 49199919 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr14 + 50560597 50560603 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr22 + 50600335 50600341 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr19 + 51422277 51422283 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr12 + 52741737 52741743 6.7e-05 0.707 ctccggg
M6339_1.02 MECP2 chr12 + 55020017 55020023 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr19 + 55180229 55180235 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr18 + 57354275 57354281 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr14 + 57865394 57865400 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr14 + 63045710 63045716 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr20 + 63378994 63379000 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr1 + 65309731 65309737 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr11 + 66421639 66421645 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr14 + 69398735 69398741 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr12 + 71440312 71440318 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr11 + 72673748 72673754 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr7 + 73831659 73831665 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr14 + 73949928 73949934 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr14 + 73949992 73949998 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr12 + 75209536 75209542 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr17 + 76870501 76870507 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr15 + 80780831 80780837 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr7 + 82442114 82442120 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr16 + 89924685 89924691 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr8 + 92965824 92965830 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr10 + 93702669 93702675 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr12 + 96399362 96399368 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr9 + 96419033 96419039 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr9 + 96419235 96419241 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr7 + 101164444 101164450 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr7 + 101165533 101165539 6.7e-05 0.707 ctccggg
M6339_1.02 MECP2 chr7 + 101165778 101165784 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr10 + 102394482 102394488 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr10 + 102461681 102461687 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr12 + 102824585 102824591 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr8 + 104223906 104223912 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr14 + 104343042 104343048 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr6 + 105402930 105402936 6.7e-05 0.707 ctccggg
M6339_1.02 MECP2 chrX + 107324972 107324978 6.7e-05 0.707 ctccggg
M6339_1.02 MECP2 chr6 + 108074826 108074832 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr12 + 109309154 109309160 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr1 + 111833733 111833739 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr12 + 119990011 119990017 6.7e-05 0.707 CTCCGGg
M6339_1.02 MECP2 chr10 + 120514278 120514284 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr12 + 120641540 120641546 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr7 + 124032892 124032898 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr9 + 128635360 128635366 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr7 + 129522964 129522970 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr9 + 132581996 132582002 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr9 + 137256514 137256520 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr5 + 140711270 140711276 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr8 + 142943747 142943753 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr2 + 148644426 148644432 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr5 + 150637941 150637947 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr6 + 152750934 152750940 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr7 + 153062238 153062244 6.7e-05 0.707 ctccggg
M6339_1.02 MECP2 chrX + 153875593 153875599 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr1 + 154567766 154567772 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr1 + 156652020 156652026 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr4 + 157220370 157220376 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr5 + 172771114 172771120 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr5 + 173304315 173304321 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr5 + 175871984 175871990 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr3 + 180036729 180036735 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr5 + 181174128 181174134 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr1 + 183471859 183471865 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr2 + 188292467 188292473 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr1 + 206557562 206557568 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr1 + 209937945 209937951 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr2 + 218991909 218991915 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr2 + 223602334 223602340 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr1 + 231162306 231162312 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr2 + 232550318 232550324 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr11 - 280207 280213 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr16 - 892714 892720 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr18 - 903795 903801 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr1 - 1335085 1335091 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr4 - 1410621 1410627 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr11 - 1519632 1519638 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr1 - 1600671 1600677 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr17 - 2054374 2054380 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr17 - 2054485 2054491 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr19 - 2740021 2740027 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr19 - 4172953 4172959 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr17 - 4493331 4493337 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr1 - 4550158 4550164 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr6 - 5026679 5026685 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr10 - 5666702 5666708 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr19 - 5690270 5690276 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr17 - 7308473 7308479 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr19 - 7611842 7611848 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr5 - 10442214 10442220 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr19 - 10702219 10702225 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr3 - 12879515 12879521 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr19 - 12933420 12933426 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr11 - 13289553 13289559 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr4 - 13484078 13484084 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr10 - 14878391 14878397 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr1 - 15727406 15727412 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr3 - 16425867 16425873 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr20 - 17227878 17227884 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr20 - 18626240 18626246 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr11 - 19344893 19344899 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr7 - 19773156 19773162 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr11 - 20158806 20158812 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr20 - 21191923 21191929 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr1 - 21659360 21659366 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr16 - 22007716 22007722 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr10 - 22229447 22229453 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr12 - 22625462 22625468 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr14 - 24052352 24052358 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr14 - 24052405 24052411 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr14 - 24114139 24114145 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr2 - 26244494 26244500 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr2 - 26244800 26244806 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr2 - 27308373 27308379 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr12 - 27780473 27780479 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr18 - 28175705 28175711 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr3 - 28576315 28576321 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr19 - 29666883 29666889 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr12 - 29784381 29784387 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr6 - 30626917 30626923 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr22 - 30802971 30802977 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr14 - 32201489 32201495 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr1 - 32886564 32886570 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr5 - 33936199 33936205 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr19 - 34999422 34999428 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr1 - 35557302 35557308 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr6 - 35727964 35727970 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr9 - 36258498 36258504 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr17 - 36464143 36464149 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr19 - 36666801 36666807 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr22 - 36703720 36703726 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr9 - 37027669 37027675 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr18 - 37564895 37564901 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr20 - 38692725 38692731 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr12 - 38905238 38905244 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr1 - 39691605 39691611 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr19 - 41705585 41705591 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr8 - 41895919 41895925 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr21 - 43728545 43728551 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr13 - 43786338 43786344 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr11 - 46392613 46392619 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr1 - 46555292 46555298 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr1 - 46555407 46555413 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr3 - 47475482 47475488 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr19 - 48110830 48110836 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr19 - 49149463 49149469 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chrX - 49166197 49166203 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr7 - 50553135 50553141 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr13 - 52850759 52850765 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr18 - 57354182 57354188 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr5 - 58582991 58582997 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr5 - 59894063 59894069 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr5 - 59894218 59894224 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr3 - 62319439 62319445 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr14 - 63045769 63045775 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr20 - 63653314 63653320 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr20 - 64161964 64161970 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr11 - 65314757 65314763 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr11 - 66289609 66289615 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr2 - 68320520 68320526 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chrX - 68829248 68829254 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chrX - 68829266 68829272 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr6 - 70956723 70956729 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr17 - 72684214 72684220 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr15 - 74995575 74995581 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr17 - 76870322 76870328 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr17 - 76870705 76870711 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr15 - 79283748 79283754 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr17 - 79993920 79993926 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr10 - 86365036 86365042 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr2 - 96831897 96831903 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr7 - 101165677 101165683 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr13 - 101448182 101448188 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr14 - 105474381 105474387 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr12 - 108198022 108198028 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr12 - 113422309 113422315 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr10 - 117254365 117254371 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr12 - 118982077 118982083 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr2 - 121104966 121104972 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr4 - 121697239 121697245 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr5 - 122078238 122078244 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr6 - 122996371 122996377 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr6 - 127516071 127516077 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr6 - 127516267 127516273 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr7 - 129434630 129434636 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr7 - 129434682 129434688 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr12 - 132447000 132447006 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr2 - 132489509 132489515 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr9 - 132582200 132582206 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr3 - 134373742 134373748 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chrX - 134549653 134549659 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr6 - 136921540 136921546 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr9 - 137146685 137146691 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr7 - 149195513 149195519 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr7 - 149195684 149195690 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr6 - 149474476 149474482 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr6 - 149717710 149717716 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr5 - 150637920 150637926 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr1 - 156414479 156414485 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr4 - 157220437 157220443 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr6 - 157323443 157323449 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr1 - 161726889 161726895 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr3 - 169146495 169146501 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr5 - 171418951 171418957 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr5 - 175872012 175872018 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr2 - 177265082 177265088 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr1 - 179954988 179954994 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr1 - 179955023 179955029 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr3 - 197555245 197555251 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr2 - 219331728 219331734 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr1 - 225655048 225655054 6.7e-05 0.707 CTCCGGG
M6339_1.02 MECP2 chr1 - 242890444 242890450 6.7e-05 0.707 CTCCGGG

DEBUGGING INFORMATION

Command line:

/software/meme/4.12.0/bin/fimo --parse-genomic-coord --verbosity 1 --oc /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/REST.IDR0.05.filt.narrowPeak.top3000.summitPlusMinus250bp.MemeChipResultsDefaultMax/fimo_out_20 --bgfile /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/REST.IDR0.05.filt.narrowPeak.top3000.summitPlusMinus250bp.MemeChipResultsDefaultMax/background --motif M6339_1.02 /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/MotifData/motif_databases/CIS-BP/Homo_sapiens.meme /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/REST.IDR0.05.filt.narrowPeak.top3000.summitPlusMinus250bp.MemeChipResultsDefaultMax/REST.IDR0.05.filt.narrowPeak.top3000.summitPlusMinus250bp.fa

Settings:

output_directory = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/REST.IDR0.05.filt.narrowPeak.top3000.summitPlusMinus250bp.MemeChipResultsDefaultMax/fimo_out_20 MEME file name = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/MotifData/motif_databases/CIS-BP/Homo_sapiens.meme sequence file name = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/REST.IDR0.05.filt.narrowPeak.top3000.summitPlusMinus250bp.MemeChipResultsDefaultMax/REST.IDR0.05.filt.narrowPeak.top3000.summitPlusMinus250bp.fa
background file name = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/REST.IDR0.05.filt.narrowPeak.top3000.summitPlusMinus250bp.MemeChipResultsDefaultMax/background alphabet = DNA max stored scores = 100000
allow clobber = true compute q-values = true parse genomic coord. = true
text only = false scan both strands = true max strand = false
threshold type = p-value output theshold = 0.0001 pseudocount = 0.1
alpha = 1 verbosity = 1

This information can be useful in the event you wish to report a problem with the FIMO software.


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