Database and Motifs High-scoring Motif Occurences Debugging Information



FIMO - Motif search tool

FIMO version 4.12.0, (Release date: Tue Jun 27 16:22:50 2017 -0700)

For further information on how to interpret these results or to get a copy of the FIMO software please access http://meme.nbcr.net

If you use FIMO in your research, please cite the following paper:
Charles E. Grant, Timothy L. Bailey, and William Stafford Noble, "FIMO: Scanning for occurrences of a given motif", Bioinformatics, 27(7):1017-1018, 2011. [full text]


DATABASE AND MOTIFS

DATABASE /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/REST.IDR0.05.filt.narrowPeak.top3000.summitPlusMinus250bp.MemeChipResultsDefaultMax/REST.IDR0.05.filt.narrowPeak.top3000.summitPlusMinus250bp.fa
Database contains 3000 sequences, 1500000 residues

MOTIFS /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/MotifData/motif_databases/CIS-BP/Homo_sapiens.meme (DNA)

MOTIF WIDTH BEST POSSIBLE MATCH
M0085_1.02 10 TCGCCTGAGG
M0104_1.02 11 ATATTAATTAA
M0105_1.02 9 TTTTAATTG
M0108_1.02 11 GATAATATTGA
M0177_1.02 10 ACCATATGTT
M0178_1.02 10 AACAGCTGTT
M0189_1.02 8 GCACGTGA
M0195_1.02 10 ACCATATGGT
M0196_1.02 10 GGCACGTGTC
M0198_1.02 10 AGCCCGTGCG
M0199_1.02 13 TAACGACACGTGC
M0211_1.02 8 GCACGTGT
M0212_1.02 10 GGCACGTGCC
M0214_1.02 9 AACATATGG
M0216_1.02 10 CGCAGCTGTG
M0217_1.02 10 ACCATATGGT
M0300_1.02 10 AATGACGTCA
M0305_1.02 9 GCCACGTGT
M0307_1.02 8 ATACGTTG
M0395_1.02 8 GTACTAAT
M0396_1.02 10 AACGGTAGCA
M0398_1.02 11 AGGAAGTGCAA
M0404_1.02 10 AAGGGGGGCA
M0405_1.02 10 TGGGCGTGGC
M0408_1.02 10 ATGTGCACAT
M0413_1.02 10 GTTGCGGGAC
M0415_1.02 8 ATAACGGT
M0422_1.02 10 CCGGGGGGTC
M0424_1.02 10 TTTGACAGCT
M0428_1.02 8 AGGAGCAC
M0431_1.02 9 ACGGTAGCA
M0432_1.02 9 CGCGCGCAC
M0433_1.02 10 ATCTAGAACA
M0436_1.02 10 TTGTTTATTG
M0437_1.02 9 TATATATAT
M0442_1.02 9 AATGCAGTG
M0443_1.02 10 TGGGCGTGGC
M0594_1.02 9 ATTTGAATT
M0603_1.02 7 TTAGCGG
M0607_1.02 9 GCGTAAATA
M0608_1.02 10 GGGGGCGTAA
M0609_1.02 10 CCCCGCGGCC
M0610_1.02 9 ATCGCGTTA
M0629_1.02 11 AATGTATCAAT
M0630_1.02 10 AATGTATCAA
M0632_1.02 10 AATGTATCAA
M0633_1.02 10 TAATGTATTA
M0635_1.02 13 AACATGTATAAAA
M0714_1.02 10 AACCGGAAGT
M0718_1.02 10 ATGTAAACAA
M0719_1.02 8 GTAAACAA
M0728_1.02 12 AATAAACAAACA
M0736_1.02 8 GTAAACAA
M0737_1.02 10 TATGTAAACA
M0747_1.02 10 AATGTAAACA
M0756_1.02 9 GTAAACAAA
M0887_1.02 9 CCTAATGAG
M0890_1.02 8 GTAATCAA
M0891_1.02 10 TTAATTGGTT
M0892_1.02 10 CCTAATTACC
M0893_1.02 10 GTTAATTAAC
M0894_1.02 8 TTAATTAG
M0896_1.02 8 TTAATTAG
M0897_1.02 10 TTTTATGGGC
M0898_1.02 8 TTACGTAA
M0900_1.02 8 TTAATTGG
M0901_1.02 8 CTTGTCAA
M0905_1.02 9 TTAATTACC
M0906_1.02 10 AATTAATTAG
M0931_1.02 9 TAATTAATT
M0937_1.02 7 TGATACC
M0942_1.02 8 TTGTAATT
M0943_1.02 8 GCTAATTA
M0949_1.02 7 TTAATGA
M0952_1.02 8 TGATACCC
M0958_1.02 7 CTAATTA
M0961_1.02 9 CTAATTGGT
M0969_1.02 9 CCAATCAGC
M0975_1.02 9 TAATTAATT
M0994_1.02 9 ATGATACCC
M0996_1.02 7 GAAATCA
M0999_1.02 9 ATTAATTAC
M1007_1.02 9 TTTATGACC
M1012_1.02 9 TTAATGACC
M1016_1.02 7 GTGATAC
M1018_1.02 7 TAATTAA
M1025_1.02 8 GCTAATTA
M1027_1.02 9 TTAATTACC
M1030_1.02 9 ACCACTTAA
M1034_1.02 7 GCAATTA
M1039_1.02 9 GCTAATTGG
M1049_1.02 10 ATGATACCCC
M1070_1.02 9 TTAATGACC
M1071_1.02 8 TTAATGAC
M1073_1.02 9 TTAATGACC
M1110_1.02 10 GGGCAATAGA
M1125_1.02 10 GCTAATTGGC
M1157_1.02 10 TTTTATGACC
M1163_1.02 9 ATTAATTAC
M1266_1.02 10 GACCGAAACC
M1281_1.02 9 CTTACGCAA
M1358_1.02 9 TAACCCTAG
M1359_1.02 10 GTTTGCGCCA
M1418_1.02 8 TGGTACCA
M1432_1.02 10 ATTGACCTCT
M1458_1.02 10 ACTGACCTCG
M1507_1.02 10 AATTTTGGCT
M1528_1.02 10 CCATGGCAAC
M1529_1.02 10 CCATAGCAAC
M1545_1.02 9 CGTACGTCA
M1581_1.02 10 TTTGCTGACT
M1582_1.02 11 ATATATAATAA
M1583_1.02 8 TTCATTGA
M1589_1.02 10 GCAGAACAAT
M1592_1.02 8 AAAACAAT
M1594_1.02 10 CATTGTTCTT
M1601_1.02 9 ATTGTTCTC
M1605_1.02 10 ATTCATCTTT
M1628_1.02 11 AGGTGTGAAGA
M1668_1.02 12 TCCAAACGAGAT
M1838_1.02 15 CATTGCCTCAGGGCA
M1841_1.02 15 GAACATTCTGTTCTT
M1863_1.02 8 GTAAACAT
M1868_1.02 14 ACAGATAAGAATCT
M1871_1.02 10 TGGGTGGGGC
M1882_1.02 21 AAAGTGAAAGTGAAAGTAAAA
M1884_1.02 15 AGCTAAAAATAGCAT
M1889_1.02 10 AAGCACATGG
M1890_1.02 18 AGAGTGCTGATTGGTCCA
M1906_1.02 11 GGGGGCGGGGC
M1915_1.02 20 GCAAGGCATGATGGGAAATC
M1917_1.02 11 GGTCACGTGGC
M1919_1.02 12 CAAGATGGCGGC
M1925_1.02 11 TATTGTGCAAT
M1926_1.02 9 CAGGTGAGG
M1927_1.02 8 GCCACGTG
M1928_1.02 11 GGGAATTTCCC
M1929_1.02 15 CATGTCTGGGCATGT
M1934_1.02 20 AGGTCAGGGTGACCTGGGCC
M1950_1.02 6 GTGGAT
M1955_1.02 11 TTTCCAGGAAA
M1963_1.02 14 GGGGCCGAGGCCTG
M1968_1.02 11 TCCCTGGGGAC
M1970_1.02 6 TGCCAA
M2065_1.02 15 AGGTCAGGGTGACCT
M2264_1.02 8 GCCATCTG
M2267_1.02 11 TTTTATGGCTT
M2268_1.02 11 TATTGCACAAT
M2270_1.02 11 TAATTTAATCA
M2273_1.02 11 GGGCGGGAAGG
M2275_1.02 13 GAACCAGGAAGTG
M2277_1.02 11 ACAGGAAGTGG
M2278_1.02 11 TGTGACTCATT
M2281_1.02 11 TCCAATCCACA
M2283_1.02 15 CAAAAGTAAACAAAG
M2286_1.02 15 TGGACTTTGGACTCT
M2287_1.02 13 GGCCATAAATCAC
M2289_1.02 13 AAGATGATGTCAT
M2292_1.02 11 GGTGACTCATC
M2296_1.02 15 CTGAGTCAGCAATTT
M2299_1.02 13 AGGGACAGCTGCA
M2301_1.02 15 AAATGGACCAATCAG
M2303_1.02 15 TGACCTCTGACCCCT
M2305_1.02 11 TGCGCAGGCGC
M2306_1.02 13 TTCATTTGCATAT
M2307_1.02 15 AGAAAGTGAAAGTGA
M2310_1.02 15 CAAACCACAAACCCC
M2313_1.02 10 CCATTGTTTT
M2314_1.02 15 GGGAGGGGGCGGGGC
M2319_1.02 14 TTCCTTTGATCTTT
M2321_1.02 20 AGACATGCCCAGACATGCCC
M2323_1.02 15 CAGATCTCGCGAGAG
M2385_1.02 11 AAGTAAACAAA
M2387_1.02 10 GTGGGGTGAT
M2388_1.02 10 ATGGGGTGAT
M2390_1.02 8 CAGGAAGG
M2391_1.02 10 GGGGCGGGGC
M2392_1.02 19 GTTGCCATGGCAACCGCGG
M4344_1.02 8 GGTTGCCA
M4427_1.02 21 GTGGCCACCAGGGGGCGCTGT
M4428_1.02 14 GGAACATTCTGTTC
M4438_1.02 15 AGGTCACGGTGACCT
M4444_1.02 14 AGGGGATTTCCCAG
M4451_1.02 11 GGTCACGTGAC
M4452_1.02 15 TCTCGATATGACTCA
M4453_1.02 15 AAGAGGAAGTGAAAC
M4454_1.02 15 AAATCTCGCGAGAAC
M4459_1.02 20 GTGCGGGGGCGGGGGGGGGG
M4461_1.02 21 GCCTTCTGGGAATTGTAGTTC
M4462_1.02 11 CGCCGGAAGTG
M4463_1.02 18 AATGTGGAAATGAGTCAG
M4467_1.02 15 ATGCCAAAAATAGCA
M4469_1.02 14 TCCATGGTGCTGAA
M4471_1.02 15 GCAGCCAAGCGTGAC
M4473_1.02 15 GCCGGCCAATCAGAG
M4476_1.02 15 TCACCTGTTGCTAGG
M4477_1.02 19 CCATGGCCATATAAGGCAA
M4478_1.02 20 CAGGTGATTTCCGGGAAATG
M4479_1.02 11 GCAGCAGCTGT
M4481_1.02 15 GGTCACGTGGCCCGG
M4484_1.02 15 CTGGGAATTGTAGTC
M4509_1.02 17 ATTTGCATAACAAAGGA
M4511_1.02 8 TGACCTCT
M4522_1.02 10 CCGGAAGTGG
M4525_1.02 15 AGCCTCAGGGCATGG
M4526_1.02 15 GGGGGGTGACTCATC
M4527_1.02 21 GGACTACAACTCCCAGCAGGC
M4532_1.02 10 CCACGTGCTC
M4536_1.02 15 GGGGAGGGCGCGCGG
M4537_1.02 15 GGCGGGAAATTTGAA
M4543_1.02 11 GGAACCACGTG
M4545_1.02 15 AGAAAGTGAAAGTGA
M4551_1.02 17 TTCATACTGGAGAGAAA
M4553_1.02 10 GGTCACGTGC
M4565_1.02 14 CAGGATGAGTCACC
M4567_1.02 15 GCAAAGTAAACAGAG
M4569_1.02 18 GTCCCGGGTTCGAATCCC
M4572_1.02 15 TGCTGACTCAGCAAA
M4600_1.02 11 GCAGATAAGGA
M4604_1.02 21 GGGGAGGAGGGAGGGGAGGAG
M4612_1.02 15 CCGCCAGGGGGCGCC
M4619_1.02 11 GGGTGACTCAT
M4623_1.02 15 CGGTGACTCATCCTT
M4629_1.02 17 CATGACTCAGCAATTTT
M4635_1.02 15 GAAAATGAAACTGAA
M4636_1.02 21 CTGCCCTCATCCAAGATGGCG
M4640_1.02 15 GGGCGGGGGTCTCGG
M4665_1.02 15 CAGATAAGAATCTGT
M4680_1.02 8 GTCACGTG
M4681_1.02 10 TGCTGAGTCA
M4692_1.02 10 ACTACAACTC
M4698_1.02 15 CTGGACTTTGGACTC
M4702_1.02 8 TGACCTTT
M4708_1.02 10 TATGCAAATA
M4840_1.02 11 AAATGCGCAAC
M4850_1.02 21 TGTTGTGTCCGTGCCATCTGG
M4930_1.02 11 AAATCGTGACT
M4971_1.02 10 GTAACAGCTG
M5116_1.02 9 ACCACCTGT
M5209_1.02 11 GTGGGCGTGGC
M5234_1.02 10 GGTCACGTAC
M5284_1.02 10 GCTAATTAGC
M5287_1.02 13 CTAATTAAATTAA
M5291_1.02 13 TTAATTTAATTAA
M5292_1.02 13 GGATGATGCAATA
M5293_1.02 14 CGATGACGTCATCG
M5294_1.02 10 GTTAAACGGT
M5300_1.02 17 TAATCGGTATTTAATTG
M5302_1.02 14 TGATGACGTCATCA
M5303_1.02 17 TGCTTTCTAGGAATTCA
M5304_1.02 10 ACCATATGGT
M5307_1.02 12 AAACATATGTTT
M5308_1.02 10 ACCATATGTT
M5310_1.02 8 TTAATTGG
M5320_1.02 15 CCCGCATACAACGAA
M5321_1.02 10 AACACGTGTT
M5322_1.02 8 TTTTTATT
M5323_1.02 14 TGATGACGTCACCG
M5325_1.02 14 TGATGACGTGGCAT
M5335_1.02 18 ATCGATAATTTTATCGAT
M5339_1.02 10 GATAATTAGG
M5342_1.02 8 GTAATTGG
M5343_1.02 8 ATAATTAC
M5344_1.02 8 GTAATTGG
M5345_1.02 10 GTTAATCCGC
M5346_1.02 10 GCTAATCCGT
M5348_1.02 13 CTAATCTAATTAA
M5349_1.02 13 CTAATTTAATCAA
M5363_1.02 12 TTTCCCGCCAAA
M5377_1.02 12 AACCCGGAAGTG
M5388_1.02 10 GCTAATTAGC
M5390_1.02 10 GCTAATTGGG
M5394_1.02 10 GTTAATTGGA
M5398_1.02 10 ACCGGAAGTG
M5414_1.02 10 GTTAATTGGT
M5420_1.02 10 ACCGGAAGTA
M5421_1.02 11 AACCGGAAATA
M5422_1.02 10 ACCGGAAGTG
M5425_1.02 15 CCGGAAGCGGAAGTG
M5427_1.02 10 GCTAATTACC
M5428_1.02 10 GCTAATTACC
M5430_1.02 10 ACCACCTGTT
M5435_1.02 14 TCGCTGTGTCATTC
M5445_1.02 14 AGTAAATATTTTTT
M5446_1.02 7 GTAAACA
M5460_1.02 7 GTAAACA
M5471_1.02 14 GTAAACATGTTTAC
M5480_1.02 10 GCTAATTAGT
M5481_1.02 10 GCTAATTGGT
M5487_1.02 10 TATGCGGGTA
M5490_1.02 16 GCTTCGTGGGGGGTCT
M5491_1.02 14 CTTCGCGGGGGGTC
M5493_1.02 8 GTACGTAA
M5497_1.02 17 AACCGGTTTAACCGGTT
M5500_1.02 10 GCTAATCCCC
M5501_1.02 10 CCTAATCCGC
M5502_1.02 10 TTTAATTAGG
M5503_1.02 10 TTTAATTAGT
M5504_1.02 12 TGGCACGTGCCG
M5506_1.02 12 TGGCACGTGCCA
M5509_1.02 10 GGCACGTGTC
M5512_1.02 9 GGTGGGCAT
M5517_1.02 10 ACTAGTTAAC
M5518_1.02 11 TTTTAATTGCT
M5519_1.02 11 TTTTAATTGGT
M5520_1.02 11 TGTTAATTGCT
M5530_1.02 12 TATAATCGTTTT
M5541_1.02 10 GTTAATTACT
M5542_1.02 10 GCTAATTAGT
M5543_1.02 10 CTTAATTAGT
M5544_1.02 10 TTTTTATGGG
M5547_1.02 11 GGTCGTAAAAT
M5551_1.02 9 TTTTATTAC
M5553_1.02 10 CCAATAAAAA
M5555_1.02 10 GTCGTAAAAA
M5557_1.02 9 GTAATAAAA
M5563_1.02 10 GCTAATTAGC
M5567_1.02 13 GAACGTTCTAGAA
M5568_1.02 15 TTCGAAACGTTCGAA
M5571_1.02 10 GACAGGTGTA
M5581_1.02 12 CATGTCATGTAA
M5582_1.02 12 CATGTCATGTAA
M5583_1.02 8 TTAAGTGC
M5584_1.02 13 TTAATCTAATTAA
M5587_1.02 9 ATGACTCAT
M5591_1.02 18 CAAAAAGGGGCGTGGCAT
M5592_1.02 14 AAGGGGGCGTGGCC
M5593_1.02 11 GGGGGCGTGGC
M5594_1.02 13 CTCGACCTAATTA
M5602_1.02 8 TTAATTGG
M5604_1.02 8 TTAATTAA
M5605_1.02 8 TTAATTAA
M5616_1.02 12 GCTATAAATAGC
M5621_1.02 8 CCTGTCAA
M5623_1.02 10 GCTAATTAAC
M5624_1.02 10 AGTAATTAAC
M5627_1.02 10 CACAGGTGTT
M5628_1.02 8 AGGTGTGA
M5631_1.02 10 GTTAATTAGA
M5632_1.02 10 ATCACGTGAT
M5634_1.02 10 ACCACGTGCC
M5635_1.02 10 TTTAATTACC
M5636_1.02 10 AACAGCTGTT
M5637_1.02 18 TAATTGGTTTTTAATTGC
M5643_1.02 12 ACCGTTAAACGG
M5652_1.02 10 GCCATATGGT
M5653_1.02 10 GACATATGTT
M5660_1.02 15 TTGGCACGGTGCCAA
M5662_1.02 15 TTGGCACAGTGCCAG
M5664_1.02 15 TTGGCACCGTGCCAA
M5672_1.02 10 GCTAATTAGC
M5689_1.02 11 AATTTGCTGAC
M5690_1.02 10 AACATATGTT
M5691_1.02 10 ACCATATGTT
M5693_1.02 10 ACCATATGTT
M5697_1.02 14 ATTATTGATTTTTT
M5702_1.02 17 TGCAGTCATGCGTGACG
M5704_1.02 10 TAATCGATTA
M5705_1.02 8 CTAATTAG
M5709_1.02 10 TAATCGATTA
M5711_1.02 17 TGCAGTCATGCGTGACG
M5714_1.02 11 TAATTTAATTA
M5715_1.02 11 TAATTTAATTA
M5717_1.02 9 CTTAATCCC
M5720_1.02 9 CTTAATCCC
M5722_1.02 12 TGACACCTGTCA
M5729_1.02 9 ATTTGCATA
M5735_1.02 13 AAATTAGCATAAT
M5738_1.02 9 ATTTGCATA
M5740_1.02 14 ATGAATAATTAATG
M5743_1.02 16 ATGCATAATTAATGAG
M5744_1.02 9 ATTTGCATA
M5746_1.02 10 ATAATGAGCT
M5750_1.02 13 GGGGGCCTTGAAA
M5753_1.02 12 CAAGACGCCTTA
M5771_1.02 10 GTTAATTGGC
M5772_1.02 8 TTAATTGG
M5777_1.02 16 CGTTGCCATGGCAACG
M5782_1.02 9 GGATAATCC
M5804_1.02 15 GAGCAACAGGTGGTT
M5805_1.02 13 ATGCAACAGGTGG
M5807_1.02 8 TTAATTGG
M5815_1.02 12 ACAATAACATTG
M5825_1.02 15 AACACTACCATTGTT
M5835_1.02 16 AACAATGTTCATTGTT
M5838_1.02 16 AACAATGTGCAGTGTT
M5856_1.02 12 AGTGGGCGTGGC
M5857_1.02 11 ACCCGGATGTA
M5865_1.02 14 AAAAAGAGGAAGTA
M5873_1.02 10 AGGTGTGAAA
M5875_1.02 20 AGGTGTGAAAAAAGGTGTGA
M5880_1.02 19 AGGTGTGAAATTCACACCT
M5882_1.02 20 TTTCACACCTAGGTGTGAAA
M5883_1.02 16 TCACACCTTCACACCT
M5889_1.02 16 GGTGTGAATTCACACC
M5896_1.02 8 AGGTGTGA
M5903_1.02 12 AAAGATCAAAGG
M5932_1.02 10 GTCACGTGAT
M5934_1.02 12 TGACAGCTGTCA
M5935_1.02 12 TGACAGCTGTCA
M5941_1.02 13 CTAATTTAATTAG
M5944_1.02 8 CTAATTAC
M5945_1.02 8 CTAATTAC
M5949_1.02 8 CTAATTAT
M5955_1.02 11 TAATGGCGGAC
M5958_1.02 13 TATGTCGCGATAG
M5959_1.02 17 TTTCGCCTGGCACGTCA
M5962_1.02 12 TTCGGTGGTCGC
M5965_1.02 15 GCACAGCGGGGGGTC
M5967_1.02 19 ATGTTAAATGTAGATTAAG
M5970_1.02 17 GTCGTGTTGTGGGAAAG
M5971_1.02 14 TCGAGGCTAGACCA
M5972_1.02 17 GAGTATTATGGGATGGA
M5973_1.02 18 AGGTGTTCTGTTAACACT
M5974_1.02 12 GGGTTCGAGGGT
M5976_1.02 17 TTCGTGGCATTTTTCTA
M5977_1.02 10 GTGGGGGGGG
M5979_1.02 12 TGTGGGAAAAGC
M5980_1.02 10 AGGTAGGTAC
M5981_1.02 15 TTTTCAGTGTGTGCA
M5998_1.02 12 GGTGACGTCATT
M6037_1.02 12 TTTGTCATGTAG
M6111_1.02 13 AGAAAGGGTTAAT
M6114_1.02 10 AAAGCAAACA
M6115_1.02 15 CATGTCTGGGCATGT
M6119_1.02 15 AAAAAGAGGAAGTGG
M6123_1.02 15 GGGGTGGGGGAGGGG
M6131_1.02 21 CCGGTTCAAACCGGTTCTGGC
M6139_1.02 9 GCACGCAAC
M6140_1.02 18 ATTGGTTTTATTGGTTAA
M6141_1.02 12 TAATCCAATTAT
M6144_1.02 10 GCCCCCGGGC
M6146_1.02 14 ACGCGCCTCGGGCG
M6147_1.02 22 TTTAATTTGATTTCGATTAATT
M6149_1.02 13 GGTTGGTATTGTG
M6150_1.02 12 GCCTCCCACGCC
M6151_1.02 8 TCACGTGC
M6152_1.02 10 GTGACGTCAC
M6154_1.02 12 TAAGGAAGAAGG
M6155_1.02 12 GTGGTGACGTGG
M6157_1.02 10 TCATTAATTG
M6159_1.02 16 TTCCTAGAAAGCTTTT
M6161_1.02 20 ACCGGGTCACGTGCAGAGGG
M6162_1.02 14 GGGTCACGTGTCCA
M6163_1.02 12 TTTGTTGTGTTC
M6164_1.02 25 ACATAGTGACACCTAGGTGTGAAAT
M6166_1.02 15 ATTATGTTAAATCCC
M6167_1.02 8 ACATAAAT
M6171_1.02 11 AATTGTGCAAT
M6172_1.02 12 AAGATTGCGCAA
M6173_1.02 13 CAGATTGCAAAAT
M6174_1.02 11 AGCCAATCAGC
M6176_1.02 12 TGACCTTTGACC
M6180_1.02 9 GTGACGTCA
M6181_1.02 11 CACTGACGTCA
M6182_1.02 8 CTAATCCC
M6184_1.02 14 AGGGGGATCGATGG
M6185_1.02 7 CGTTGGC
M6186_1.02 11 TGTTACATAAC
M6187_1.02 13 GGGGATTGCATTT
M6188_1.02 8 ATAATTAT
M6189_1.02 10 GATAATTACA
M6191_1.02 10 GGCGCGAAAC
M6192_1.02 10 CGCGCGAAAC
M6194_1.02 10 CGCGCCAAAC
M6196_1.02 13 TAGGGCGCGAAAC
M6197_1.02 9 CGTGACGTC
M6199_1.02 11 GGCGTGGGCGG
M6200_1.02 11 AGAGTGGGTGT
M6201_1.02 11 GGCGGCAGGGC
M6204_1.02 15 TAGCAGGAAGTGAGT
M6205_1.02 14 GGCAAACAGGAAAT
M6206_1.02 11 ATAAGGAAGTA
M6207_1.02 9 ACCGGAAGT
M6208_1.02 12 CCCAGGAAGTGC
M6210_1.02 13 TGCCCACGTGGTG
M6211_1.02 14 CGGGGATACGAAAT
M6212_1.02 13 CCCACGTACGCAC
M6213_1.02 11 ACCGGAAATCC
M6215_1.02 9 TGACCTTGA
M6216_1.02 9 TGACCTTGA
M6221_1.02 11 GCGGGAAGTGG
M6222_1.02 8 CAGGAAGT
M6223_1.02 13 GACAGGAAGTAAC
M6224_1.02 17 GCCACAGGAAGTAACAC
M6225_1.02 16 AAGATAAGATAAGATA
M6226_1.02 10 CAGGAAATAA
M6228_1.02 10 CTGACTCATC
M6234_1.02 13 GCAAAGCAAACAA
M6235_1.02 15 CTTAAGTAAACAACG
M6236_1.02 15 TCTGGCAAAACAAAC
M6237_1.02 9 AAACAAACA
M6238_1.02 11 AAAATAAACAT
M6239_1.02 11 AAAAGTAAACA
M6240_1.02 12 GACCAATCAGAG
M6241_1.02 10 TAAATAAACA
M6242_1.02 13 TAAACAAAAACAA
M6244_1.02 13 AAAAACAAACAAC
M6245_1.02 16 AAAAAGTAAACAAACC
M6246_1.02 13 AGGTAAACAAACA
M6247_1.02 9 AATAAACAA
M6249_1.02 9 AAACAAATT
M6250_1.02 12 AAATAAACAATG
M6251_1.02 12 TTGTGTTTTTTT
M6256_1.02 9 ACAGATAAC
M6257_1.02 17 TAAGAGATAACTTAGAT
M6258_1.02 7 AAGATAA
M6259_1.02 14 CACATGCGGGTATT
M6262_1.02 11 TGCAGTGATTT
M6263_1.02 10 GCTGTGATTT
M6264_1.02 11 CTGGGTGGTCT
M6265_1.02 11 GTGGGTGGTCT
M6266_1.02 11 CTGGGTGGTCC
M6267_1.02 10 GTGGGGGGTA
M6268_1.02 12 AATGCCAGACGC
M6269_1.02 9 ACTCATTGA
M6270_1.02 20 AGGGACGCAGCTGCTCCCCA
M6271_1.02 13 GGGCTCGTGGCGG
M6272_1.02 16 AGGCCACGTGCCGGAT
M6273_1.02 17 GGGGGCACGTGGCATTA
M6274_1.02 9 GGGTTGCCC
M6275_1.02 12 GCGTACGTGCGG
M6276_1.02 16 GCGCTAGCGGACGTTA
M6277_1.02 13 CTGTTACGTAATC
M6278_1.02 12 TAGGGCTGCAAA
M6279_1.02 7 AAAATAC
M6280_1.02 15 AATAATCGCGAATAT
M6281_1.02 15 GGTTAATTATTAACC
M6282_1.02 14 GTTAATCATTAACC
M6285_1.02 14 TTTATTGATTTTTT
M6287_1.02 14 AGAATGTTCTAGAA
M6289_1.02 12 TCATAAATCATC
M6290_1.02 11 CCAATAAAACC
M6291_1.02 10 CATCCATCAA
M6292_1.02 10 CATTAATCAA
M6293_1.02 15 TCCAATCTATTGATT
M6295_1.02 10 CCATCCATCA
M6296_1.02 13 TGCATCAATCATT
M6297_1.02 10 CATTAATCAA
M6298_1.02 11 GCATTAATCAA
M6299_1.02 15 AAAGTAATAAATCAT
M6300_1.02 14 GGGCATCAATCAAA
M6301_1.02 10 AATTAAAGCA
M6302_1.02 11 TCCCTAATAAA
M6303_1.02 8 TTAATTGA
M6304_1.02 10 CCATTAAACT
M6306_1.02 12 TGTCAGGGGGCA
M6308_1.02 14 GGAAAGTGAAAGCA
M6309_1.02 17 GGAAAGCGAAACTGAAA
M6311_1.02 20 TAAAGGAAAGCCAAAAGTGA
M6312_1.02 10 GAAAGTGAAA
M6313_1.02 15 GAGAAAGTGAAACTG
M6314_1.02 12 GAAAGCGAAACT
M6315_1.02 7 GTTAATG
M6316_1.02 9 CCAGGTGCA
M6321_1.02 17 GGCGGGGAGGTGGGGGC
M6322_1.02 11 CAGGGTGTGGC
M6323_1.02 15 TGCCTGGGTGTGGCT
M6324_1.02 10 TGGGCGGGGC
M6325_1.02 8 GGGGGCGG
M6326_1.02 9 CAGGGGGTG
M6327_1.02 7 CTTTGAT
M6328_1.02 13 CACTTTTAATTAG
M6329_1.02 13 AAAATTAATTAAT
M6330_1.02 21 GTGCTGACCCCGCAGCCTTCG
M6331_1.02 9 TGCTGACGG
M6332_1.02 8 TTGCTGAC
M6333_1.02 7 CATGACT
M6336_1.02 17 GGGGGGGGGAGGGAGGG
M6337_1.02 11 GGGGCCGGAGG
M6338_1.02 17 TACAACAACCTGTTCTT
M6339_1.02 7 CTCCGGG
M6342_1.02 12 GCTAAAAATAGC
M6343_1.02 13 CATAAAACTGTCA
M6344_1.02 13 TGACAGCTGTCAA
M6345_1.02 10 ATCACATGAC
M6346_1.02 19 CCACGGCGGTGTCACATGC
M6347_1.02 7 TAATTGT
M6348_1.02 17 AGTGCCGTGTGCAAAAC
M6349_1.02 10 TCAACCTGCA
M6350_1.02 7 CAGTTGG
M6352_1.02 8 CCACGTGG
M6353_1.02 7 GCAGCTG
M6354_1.02 9 GACAGCTGC
M6355_1.02 13 TGACAGCTGCTGC
M6356_1.02 9 GGTGGGGAA
M6357_1.02 8 TTTAATGG
M6358_1.02 12 CGGCAGATGGCC
M6359_1.02 7 AATGACT
M6360_1.02 12 CATGACTCAGCA
M6361_1.02 13 ATGGAAATTTCCA
M6363_1.02 9 AATTTTCCA
M6364_1.02 9 AGTTTTCCA
M6365_1.02 10 AAATTTTCCT
M6366_1.02 15 CATGGAGTTTTCCAC
M6368_1.02 14 ATGCATTACATAAC
M6370_1.02 11 GGAATCTCCCT
M6373_1.02 14 CAGCCAATCAGCGC
M6374_1.02 10 CTCAAGTGCT
M6375_1.02 12 AAACCACTTAAA
M6376_1.02 7 TCAAGTG
M6377_1.02 9 TTCAAGGAC
M6378_1.02 13 AATAAGTATATAA
M6379_1.02 11 AGTTAAGTGGA
M6380_1.02 9 CTAATTGGT
M6381_1.02 10 TCTCCCACGC
M6382_1.02 14 TCTGACCTACTTTT
M6383_1.02 19 CGTTGACCTTTGACCTTTA
M6384_1.02 14 AGGTCATTGACCCT
M6385_1.02 19 CTGAACTTTTTTGACCTCA
M6387_1.02 18 CTGAACTTTCCTGACCCC
M6389_1.02 13 CTGACCTCTGGCC
M6391_1.02 14 TGACTTTTGACTTT
M6392_1.02 18 TCAAGTGAACTTTGTCCT
M6393_1.02 9 GTGACCTTT
M6394_1.02 9 GTGACCTTT
M6395_1.02 10 CTGACCTTTG
M6396_1.02 10 TGGCCTTGAA
M6397_1.02 13 TGACCTTGAACTT
M6399_1.02 21 GTCTTGTTATTGATTTTTTTT
M6400_1.02 8 CTAATCCT
M6401_1.02 15 CTTTAATCCCTTAAC
M6402_1.02 9 TGTAACTGT
M6406_1.02 18 GTTCAGTCATGCGTGACA
M6410_1.02 11 TCAAGCGTGAA
M6411_1.02 14 GTCACTGAAGCGGG
M6412_1.02 15 CCCATCAATCAAATT
M6413_1.02 15 CCATCAATCAATTTA
M6415_1.02 9 CTAATTACC
M6416_1.02 11 TCTGTGGTTTG
M6417_1.02 13 ATATATTCATGAG
M6418_1.02 10 TTTAATCCCA
M6419_1.02 13 CATCAATCAAGCT
M6420_1.02 17 GGGGGCATCAGGAGGGG
M6422_1.02 10 CGGGGGGCCC
M6423_1.02 9 ATTTGCATA
M6425_1.02 14 TTTGCATTACAATG
M6426_1.02 10 CATAAATAAT
M6427_1.02 13 CAGCTCATTAATA
M6429_1.02 13 CATAATTTATGCA
M6430_1.02 7 TGACCTT
M6432_1.02 14 TGACCTTTGTCCTA
M6433_1.02 18 GTGACCTTTGACCTACTT
M6436_1.02 13 TACAGACTGTTCT
M6438_1.02 15 GAGTAATTAATATAA
M6439_1.02 7 TAATCTG
M6440_1.02 7 TTAATTG
M6441_1.02 21 GGACAGCTGTTCTGTTTCCTG
M6442_1.02 17 CCCTGCCCCCCCCTTCC
M6443_1.02 7 TGACCTC
M6445_1.02 11 GCCCTGACCTC
M6446_1.02 20 GTGACCTCTGGGTGACCCCC
M6448_1.02 12 GGGGGATTTCCC
M6449_1.02 12 TGGGGATTTCCC
M6451_1.02 12 GTTGCCAGGGAA
M6453_1.02 14 TTACCATGGCAACC
M6454_1.02 12 TGACCTAGTTTT
M6455_1.02 13 CTGACCTACTTTT
M6456_1.02 22 GGGGGGGGGGGTGGTTTGGGGT
M6457_1.02 10 TAACCACAAA
M6459_1.02 14 AACCACAAACCCCA
M6461_1.02 10 TGTGACCTCA
M6462_1.02 13 GTGACCTTTGACC
M6463_1.02 12 AGCCTGTCTGCC
M6464_1.02 11 GTGTCCGTCTG
M6465_1.02 10 GTGTCTGGCC
M6466_1.02 9 TGTCTGGCC
M6468_1.02 8 CCAGGTGG
M6469_1.02 7 CCAGGTG
M6470_1.02 7 TCTTTGT
M6471_1.02 8 CATTGTTC
M6472_1.02 7 CATTGTT
M6473_1.02 18 CAACAATCTTCATTGTCC
M6474_1.02 19 GGAAAAGAACAATGGGTTC
M6475_1.02 16 ATTTGCATAACAATGG
M6476_1.02 12 GAGAACAAAGCG
M6477_1.02 8 TAACAATA
M6478_1.02 11 AGAACAATGGG
M6482_1.02 20 GGGGGGGGGCGGGGCCGGGG
M6483_1.02 24 GGGGCCAGGGGGGGGGCGGGGCCG
M6485_1.02 12 AAAAAGAGGAAG
M6486_1.02 16 CGGCTGTTACCCTGGG
M6490_1.02 9 AAAACAAAA
M6491_1.02 12 TTTCCAGGAATT
M6492_1.02 13 TTTTCTGGGAATT
M6496_1.02 13 TTTCCCAGAAAAG
M6497_1.02 13 TTCCCAGGAATTT
M6498_1.02 9 TGACCTTGA
M6499_1.02 9 CGTGGGAAA
M6500_1.02 12 GACCATCTGTTC
M6503_1.02 25 GTCGCTTCTCACACCTCTGATGGCA
M6504_1.02 24 AGGTAGAGAATTAGGTGATAAAAA
M6505_1.02 8 AGGTGTGA
M6506_1.02 12 GCGCTTTGTTCT
M6507_1.02 14 CACATTCCTGCGCC
M6508_1.02 15 GATATTTCTGCTCTA
M6509_1.02 12 AAAAATAGCCCT
M6510_1.02 14 TGTTTATGTAAATG
M6513_1.02 11 GCCAGCTGCGG
M6514_1.02 16 GCCTGAACTGGCCAGA
M6515_1.02 14 AAATGGCGGGAAAC
M6516_1.02 11 GACCATCTGGT
M6517_1.02 10 GGTCATGTGG
M6518_1.02 9 GGTCACGTG
M6519_1.02 16 CAGGTGACACCTGACA
M6521_1.02 10 CTGACCTGAG
M6523_1.02 17 TGACCTGACCTGACCTC
M6525_1.02 11 CGCCAAGGAGC
M6527_1.02 10 CCCCAGGTGG
M6529_1.02 7 TCTCTGG
M6532_1.02 7 TGACCTC
M6534_1.02 11 TTAGCTAATTA
M6535_1.02 13 GCGGGGGCGGGGG
M6536_1.02 12 GACGTGTCATTA
M6537_1.02 11 GGGGATTGGCC
M6539_1.02 22 CGGAGAGGGGGAGGGGGGGGGC
M6540_1.02 15 CAATAGCGGTGGTGG
M6542_1.02 13 AGATGATAGAGCC
M6544_1.02 12 GGGGATTTCCCA
M6545_1.02 14 GGTAGGGAAACCCC
M6546_1.02 11 ATTAATAATTA
M6547_1.02 19 GGGGGCCCCAGGCCTCGGC
M6548_1.02 9 GGGGTGGTC
M6549_1.02 9 GGGGTGGTC
M6550_1.02 9 TGGGTGGTC
M6552_1.02 15 GGGGTGGGGGAGGGG
M6553_1.02 12 GAGGGGGGCGGA
M6554_1.02 14 TCCAGATGTTTCGG
M6555_1.02 9 CGATAATGA
M6556_1.02 24 GGGCAACAAATCCCTGCGCCCCGT
M6557_1.02 12 GGAAAAAATCGG
M6558_1.02 15 GCACCCTTGGGTGCC
M6559_1.02 16 CCCACGGTTACTGCCG

Random model letter frequencies (/srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/REST.IDR0.05.filt.narrowPeak.top3000.summitPlusMinus250bp.MemeChipResultsDefaultMax/background):
A 0.245 C 0.255 G 0.255 T 0.245


SECTION I: HIGH-SCORING MOTIF OCCURENCES

Motif ID Alt ID Sequence Name Strand Start End p-value q-value Matched Sequence
M6559_1.02 ZNF589 chr6 - 37007516 37007531 1.03e-06 0.856 GCCAGGGTTATTGCCT
M6559_1.02 ZNF589 chr11 - 1401632 1401647 1.19e-06 0.856 CCCACGGCTGCTGCCG
M6559_1.02 ZNF589 chr3 - 10460268 10460283 1.33e-06 0.856 CCCAGGGGTACTGTCT
M6559_1.02 ZNF589 chr16 - 24900511 24900526 2.13e-06 0.856 CCCAAGGCTTTTGCCC
M6559_1.02 ZNF589 chr15 + 72319708 72319723 2.26e-06 0.856 CCCGCGGGATCTGCCC
M6559_1.02 ZNF589 chr1 - 35661066 35661081 2.72e-06 0.856 CCCACGGCATCTGTCC
M6559_1.02 ZNF589 chr12 - 100539231 100539246 2.88e-06 0.856 TCAAGGGTTTTTGCCT
M6559_1.02 ZNF589 chr11 + 120900784 120900799 3.66e-06 0.856 CCCAGGGTTTCACCCA
M6559_1.02 ZNF589 chr12 + 49104846 49104861 3.83e-06 0.856 CCCAGGGCAATTGCCA
M6559_1.02 ZNF589 chr1 + 11898936 11898951 3.87e-06 0.856 TCCAAGGGAACTGCCC
M6559_1.02 ZNF589 chr13 - 21176281 21176296 4.21e-06 0.856 CCCACGGGAACCGCCA
M6559_1.02 ZNF589 chr9 + 130926197 130926212 4.28e-06 0.856 CACACTGGTACTGCCC
M6559_1.02 ZNF589 chr3 - 12879307 12879322 4.42e-06 0.856 CCCAGGGCTTCTGCAG
M6559_1.02 ZNF589 chr19 - 48400462 48400477 4.42e-06 0.856 CCCAGGGCATCTACCT
M6559_1.02 ZNF589 chr14 - 35535493 35535508 5.55e-06 0.856 ACCACTGGTACTGCCC
M6559_1.02 ZNF589 chr5 - 93607576 93607591 5.55e-06 0.856 CCCAGGGCTTCAGCGC
M6559_1.02 ZNF589 chr7 - 76201916 76201931 5.67e-06 0.856 CCCGCGGGTGCTGCCG
M6559_1.02 ZNF589 chr21 + 33947635 33947650 5.8e-06 0.856 CCCAGGGGTATTCCCA
M6559_1.02 ZNF589 chr5 - 1409552 1409567 6.3e-06 0.856 CACAGGGTAACTGCAC
M6559_1.02 ZNF589 chr17 + 69763818 69763833 6.54e-06 0.856 tccagggtaacagcag
M6559_1.02 ZNF589 chr12 - 112664638 112664653 6.69e-06 0.856 CCCTAGGTTTCAGCCC
M6559_1.02 ZNF589 chr1 - 75616813 75616828 6.79e-06 0.856 CCCAAGGGAACTATCC
M6559_1.02 ZNF589 chr17 + 51119693 51119708 7.82e-06 0.856 TCCAAGGTTACAACCT
M6559_1.02 ZNF589 chr2 + 37925337 37925352 8.29e-06 0.856 TCCAGGGCTACTGTCC
M6559_1.02 ZNF589 chr10 - 26377501 26377516 9.38e-06 0.856 TCCAAGGTTTCTCCCC
M6559_1.02 ZNF589 chr20 + 63176208 63176223 9.38e-06 0.856 CCAAGGGCAACTGTCT
M6559_1.02 ZNF589 chr7 - 65260771 65260786 9.38e-06 0.856 TCCAAGGTTTCTCCCC
M6559_1.02 ZNF589 chr5 + 155726311 155726326 9.52e-06 0.856 TCCAGGGGAACAACCT
M6559_1.02 ZNF589 chr19 + 42601902 42601917 9.72e-06 0.856 CCCTGGGTTGCTGCCC
M6559_1.02 ZNF589 chr21 + 43880566 43880581 9.86e-06 0.856 CCCAGTGGTATTGCCA
M6559_1.02 ZNF589 chr1 - 38076063 38076078 1e-05 0.856 GCCAAGGGATTTGCCC
M6559_1.02 ZNF589 chr20 - 63645256 63645271 1.01e-05 0.856 TCCAGGTTTACAGCCC
M6559_1.02 ZNF589 chr12 - 11847755 11847770 1.04e-05 0.856 CCCAGGGGAGCTGTCC
M6559_1.02 ZNF589 chr1 - 17831783 17831798 1.04e-05 0.856 CCCAGGGGAGCTGTCC
M6559_1.02 ZNF589 chr17 + 29004259 29004274 1.04e-05 0.856 CCCAGGGGAGCTGTCC
M6559_1.02 ZNF589 chr17 - 17703408 17703423 1.06e-05 0.856 CCAAAGGTTTTTGGCC
M6559_1.02 ZNF589 chr14 + 81435907 81435922 1.1e-05 0.862 CCCGGGGTTTCAGGCG
M6559_1.02 ZNF589 chr12 - 1831452 1831467 1.2e-05 0.917 CCCAGGGGTTATCCCC
M6559_1.02 ZNF589 chr8 - 93587706 93587721 1.23e-05 0.917 CCCAGTGCTTCTGCCT
M6559_1.02 ZNF589 chr7 - 45267342 45267357 1.26e-05 0.92 CACAGGGGATTTACCT
M6559_1.02 ZNF589 chr7 + 32428030 32428045 1.32e-05 0.935 GCAACGGGAGCAGCCG
M6559_1.02 ZNF589 chr13 - 98441407 98441422 1.4e-05 0.957 CAGACGGTTTTCGCCG
M6559_1.02 ZNF589 chr20 - 43539286 43539301 1.44e-05 0.957 CCAAGGGGTTTTCCCA
M6559_1.02 ZNF589 chr19 + 31380938 31380953 1.45e-05 0.957 CCAAGGGGAACCGCAG
M6559_1.02 ZNF589 chr3 - 10495164 10495179 1.51e-05 0.957 CCCAATGCAACTGCCC
M6559_1.02 ZNF589 chr8 + 61288159 61288174 1.51e-05 0.957 CCCTCTGTATTTGCCG
M6559_1.02 ZNF589 chr2 + 157587764 157587779 1.59e-05 0.981 CCAAGGGGAGCTGTCC
M6559_1.02 ZNF589 chrX + 49166231 49166246 1.62e-05 0.981 CCCACGGTTTCTCCTC
M6559_1.02 ZNF589 chr1 + 29736554 29736569 1.69e-05 0.989 ccctgggttttacccc
M6559_1.02 ZNF589 chr15 - 67821177 67821192 1.79e-05 0.989 ACAAAGGGTACCGCCC
M6559_1.02 ZNF589 chr12 - 1831451 1831466 1.83e-05 0.989 CCAGGGGTTATCCCCG
M6559_1.02 ZNF589 chr5 - 58583035 58583050 1.86e-05 0.989 CACACGCGTACTGCCG
M6559_1.02 ZNF589 chr10 - 77680047 77680062 1.86e-05 0.989 CCCAGGGTTAAAGCTG
M6559_1.02 ZNF589 chr19 + 45952986 45953001 1.89e-05 0.989 CCCAGGGGTTCTCGCC
M6559_1.02 ZNF589 chr19 + 45952986 45953001 1.89e-05 0.989 CCCAGGGGTTCTCGCC
M6559_1.02 ZNF589 chr7 + 101164766 101164781 1.9e-05 0.989 CCAGGGGGTGCTGCCC
M6559_1.02 ZNF589 chr6 + 166815824 166815839 1.95e-05 0.997 ACAGAGGTTTTTGCCG
M6559_1.02 ZNF589 chr16 - 20599216 20599231 2.03e-05 1 CCAAGTGCTACTGTCC
M6559_1.02 ZNF589 chr20 - 64192398 64192413 2.1e-05 1 ACCACGGCTTATGCCC
M6559_1.02 ZNF589 chr1 + 154567752 154567767 2.13e-05 1 CCCAGCGTTTCCGCCT
M6559_1.02 ZNF589 chr5 + 175869648 175869663 2.14e-05 1 taaagggttAatgccc
M6559_1.02 ZNF589 chr1 + 146039269 146039284 2.33e-05 1 GAAAAGGCTACTGCCG
M6559_1.02 ZNF589 chr16 + 2673764 2673779 2.38e-05 1 cccgaggtaatagcgg
M6559_1.02 ZNF589 chr14 - 56787720 56787735 2.43e-05 1 CCATGGGGAACTGTCC
M6559_1.02 ZNF589 chr4 - 185395997 185396012 2.46e-05 1 CCCGCGGGTGCTGTCG
M6559_1.02 ZNF589 chr14 + 92923617 92923632 2.46e-05 1 CCCGGGGCAACTCCCC
M6559_1.02 ZNF589 chr5 - 146645520 146645535 2.51e-05 1 TCCAGGGGAACTGTGG
M6559_1.02 ZNF589 chr12 - 109309284 109309299 2.56e-05 1 CGCACGGCTACTGCGC
M6559_1.02 ZNF589 chr16 - 56194283 56194298 2.71e-05 1 CAAAGGGCAATTCCCC
M6559_1.02 ZNF589 chr11 + 908396 908411 2.71e-05 1 CCAAGGGCAGCAGCCT
M6559_1.02 ZNF589 chr11 - 908547 908562 2.73e-05 1 GCCACCGTTTCAGCCT
M6559_1.02 ZNF589 chr3 + 114179119 114179134 2.8e-05 1 TCCACTGTTTTTACCT
M6559_1.02 ZNF589 chr19 + 55216892 55216907 2.83e-05 1 CCGGGGGCTACTGCCC
M6559_1.02 ZNF589 chr16 + 56194279 56194294 2.94e-05 1 GCCTGGGGAATTGCCC
M6559_1.02 ZNF589 chr10 - 132054761 132054776 3e-05 1 CCCAGGGGAACAGCTT
M6559_1.02 ZNF589 chr19 + 29476525 29476540 3e-05 1 CCCAGTGTTTTTCTCC
M6559_1.02 ZNF589 chr19 + 39223897 39223912 3.08e-05 1 CCCAGTGGTGCTGCCT
M6559_1.02 ZNF589 chr14 - 74660863 74660878 3.31e-05 1 CCAGAGGTAATCACCG
M6559_1.02 ZNF589 chr5 - 170681299 170681314 3.4e-05 1 CACGCTGTTTCAGCCC
M6559_1.02 ZNF589 chr1 + 206134151 206134166 3.42e-05 1 CCAAGGGTAGCTCTCC
M6559_1.02 ZNF589 chr12 + 122029 122044 3.46e-05 1 TCCAGGGGTTTTGTGG
M6559_1.02 ZNF589 chr17 + 16536071 16536086 3.46e-05 1 GCAAGGGGAGTTACCG
M6559_1.02 ZNF589 chr20 + 49482908 49482923 3.46e-05 1 CCCTGGGCTTCTGCGG
M6559_1.02 ZNF589 chr9 - 70085235 70085250 3.55e-05 1 CCCACGGTAAAAGGCT
M6559_1.02 ZNF589 chr9 + 131774141 131774156 3.55e-05 1 ACCAGGGCTACAGGCC
M6559_1.02 ZNF589 chr2 + 73291264 73291279 3.57e-05 1 ACCGCGGGAACTGTCC
M6559_1.02 ZNF589 chr1 - 231162714 231162729 3.66e-05 1 CCAGCGGCTTCAACCT
M6559_1.02 ZNF589 chr12 + 38905283 38905298 3.71e-05 1 CCCGGGGTAACTCCAG
M6559_1.02 ZNF589 chr3 - 135106556 135106571 3.75e-05 1 CGCTCGGTAATAACCG
M6559_1.02 ZNF589 chr1 + 34907842 34907857 3.75e-05 1 aacaggggaACAACCT
M6559_1.02 ZNF589 chr17 - 74937496 74937511 3.82e-05 1 CCAACTGTAACTGCTC
M6559_1.02 ZNF589 chr9 - 134467321 134467336 3.82e-05 1 CCCAGTGTAACTCCAG
M6559_1.02 ZNF589 chr21 - 31586399 31586414 3.89e-05 1 ACCAAGGTATTTACCA
M6559_1.02 ZNF589 chr9 + 36258414 36258429 3.89e-05 1 CCCTCGGTTTCCGCGC
M6559_1.02 ZNF589 chr11 + 113474384 113474399 3.92e-05 1 CCCTCCGCTACTGCCG
M6559_1.02 ZNF589 chr10 + 84187360 84187375 4.16e-05 1 GCAGAGGGTTCAGCCG
M6559_1.02 ZNF589 chr10 - 6840097 6840112 4.24e-05 1 ACAGGGGTTATAGCCA
M6559_1.02 ZNF589 chr12 - 85469553 85469568 4.24e-05 1 TCCAAGGTTTCTCCCA
M6559_1.02 ZNF589 chr3 + 53256116 53256131 4.29e-05 1 CCCAGGCCTTCAgccc
M6559_1.02 ZNF589 chr16 - 8026646 8026661 4.37e-05 1 CCAAAGGGAGCTGTCC
M6559_1.02 ZNF589 chr8 + 10990357 10990372 4.37e-05 1 CCAAAGGGAGCTGTCC
M6559_1.02 ZNF589 chr2 - 183124883 183124898 4.42e-05 1 CCCACGTGTACCGCGG
M6559_1.02 ZNF589 chr21 + 35491341 35491356 4.42e-05 1 caaaggggatcagcac
M6559_1.02 ZNF589 chr5 - 1086340 1086355 4.45e-05 1 CCGACGGGTGCTGTCC
M6559_1.02 ZNF589 chr10 + 92387369 92387384 4.51e-05 1 ACAAGGGGTTTTACAG
M6559_1.02 ZNF589 chr11 - 113474512 113474527 4.56e-05 1 CCCACGGTTGCCGCTG
M6559_1.02 ZNF589 chr11 - 20158833 20158848 4.58e-05 1 ACAAAGGTTTCAGCAC
M6559_1.02 ZNF589 chr5 - 1669619 1669634 4.61e-05 1 TCCACGGGAACAGGCT
M6559_1.02 ZNF589 chr18 - 5868431 5868446 4.61e-05 1 CAGAGGGTTACACCCT
M6559_1.02 ZNF589 chr1 + 32964003 32964018 4.75e-05 1 CCCTCGGCTGCAGCCC
M6559_1.02 ZNF589 chr11 + 1016099 1016114 4.78e-05 1 GACACGGTAACagtgg
M6559_1.02 ZNF589 chr1 + 10648971 10648986 4.87e-05 1 CCAGCGGGAACTGCTG
M6559_1.02 ZNF589 chr5 - 171418873 171418888 4.9e-05 1 CACACGGCTACCACCA
M6559_1.02 ZNF589 chr17 - 45767943 45767958 4.95e-05 1 GCCTGGGTAACAGCGG
M6559_1.02 ZNF589 chr16 - 15601383 15601398 5.01e-05 1 CCCAGTGGTGCTGTCC
M6559_1.02 ZNF589 chr6 + 129792325 129792340 5.01e-05 1 AGAACGGGTACTGTCC
M6559_1.02 ZNF589 chr5 - 1086257 1086272 5.11e-05 1 CCCAGTCTTTCTGCCC
M6559_1.02 ZNF589 chr13 + 34913267 34913282 5.2e-05 1 GCCACTGCTACTGTCC
M6559_1.02 ZNF589 chr8 - 25028159 25028174 5.23e-05 1 ACCTGGGTTTCAGCCA
M6559_1.02 ZNF589 chr19 + 42115335 42115350 5.23e-05 1 AACAAGGGAACAGCCT
M6559_1.02 ZNF589 chr1 - 110218816 110218831 5.26e-05 1 CCCAGTTGTTCAGCCC
M6559_1.02 ZNF589 chr10 - 128113150 128113165 5.29e-05 1 CCCACGCTTACAGCAC
M6559_1.02 ZNF589 chr11 + 70650502 70650517 5.32e-05 1 CACAAGGGTTCAGCAC
M6559_1.02 ZNF589 chr3 + 127159026 127159041 5.32e-05 1 CGCAGGGCTGCAGCCC
M6559_1.02 ZNF589 chr1 + 205054240 205054255 5.45e-05 1 TGCAAGGCTACAGCCG
M6559_1.02 ZNF589 chr19 - 36073757 36073772 5.48e-05 1 CAGAGGGTTACTGCTG
M6559_1.02 ZNF589 chr1 - 1944120 1944135 5.58e-05 1 GCCACGGCTGCTGTCC
M6559_1.02 ZNF589 chr12 - 104142636 104142651 5.61e-05 1 CCATAGGTTGTTGCCC
M6559_1.02 ZNF589 chr19 + 8584533 8584548 5.61e-05 1 cccacggcaatcatct
M6559_1.02 ZNF589 chr17 + 19996742 19996757 5.61e-05 1 CCCAGTGCAACTCCCT
M6559_1.02 ZNF589 chr10 + 71582240 71582255 5.61e-05 1 gccagtgcatttgccc
M6559_1.02 ZNF589 chr17 - 7191778 7191793 5.64e-05 1 ACAGCGGTTTCAGCAG
M6559_1.02 ZNF589 chr18 + 59140472 59140487 5.67e-05 1 acaacgggagctgtcc
M6559_1.02 ZNF589 chr19 + 35495442 35495457 5.71e-05 1 CCACGGGTTTCCACCC
M6559_1.02 ZNF589 chr12 - 10732597 10732612 5.77e-05 1 CCAGAGGGAACAGCCA
M6559_1.02 ZNF589 chr10 - 59177315 59177330 5.81e-05 1 CCGAGGGCATTTCCCC
M6559_1.02 ZNF589 chr1 + 58244981 58244996 5.81e-05 1 CCAAGGTTTTTAACCA
M6559_1.02 ZNF589 chr6 + 158536190 158536205 5.81e-05 1 CCCGCGGGAGCTGTCC
M6559_1.02 ZNF589 chr1 + 235649021 235649036 5.81e-05 1 TCCCCGGTTGCTGCCG
M6559_1.02 ZNF589 chr19 - 41696718 41696733 5.91e-05 1 CCCTGGGCTGCAGCCC
M6559_1.02 ZNF589 chr3 - 128215594 128215609 5.91e-05 1 TACAGTGTATTAGCCC
M6559_1.02 ZNF589 chr17 + 36487080 36487095 6.09e-05 1 TCCGCGGGTTCTGCAG
M6559_1.02 ZNF589 chr1 - 66023269 66023284 6.12e-05 1 CAAAAGGTTTTAACAG
M6559_1.02 ZNF589 chr4 - 80335783 80335798 6.12e-05 1 CCAAGGCCTTCAGCCC
M6559_1.02 ZNF589 chr3 - 53255989 53256004 6.16e-05 1 GCCGCGGGAGCAGCCG
M6559_1.02 ZNF589 chr19 + 49149553 49149568 6.16e-05 1 CCAAGTCTTTCAGCCG
M6559_1.02 ZNF589 chr10 + 118596282 118596297 6.19e-05 1 TCCGCTGGATCTGCCG
M6559_1.02 ZNF589 chr17 + 9240472 9240487 6.23e-05 1 CCGACGGGATCCCCCC
M6559_1.02 ZNF589 chr7 + 133413003 133413018 6.23e-05 1 accagggttaatgctg
M6559_1.02 ZNF589 chr6 + 39137406 39137421 6.3e-05 1 GCCAGTGTTACTGCTG
M6559_1.02 ZNF589 chr7 + 143321791 143321806 6.3e-05 1 GCCAAGGTTGTCGCCC
M6559_1.02 ZNF589 chr6 - 32462936 32462951 6.38e-05 1 GAAAGGGTTTTTCCCT
M6559_1.02 ZNF589 chr2 - 234975214 234975229 6.42e-05 1 CCCGATGTTACTGCCA
M6559_1.02 ZNF589 chr16 - 29812434 29812449 6.45e-05 1 CCCGATGGTTCAGCCC
M6559_1.02 ZNF589 chr14 + 35047002 35047017 6.45e-05 1 GCCtgggcatctgccc
M6559_1.02 ZNF589 chr16 - 4958181 4958196 6.71e-05 1 CCCAGGCGAACTCCCC
M6559_1.02 ZNF589 chr9 + 124149955 124149970 6.75e-05 1 CCCACGGTTACCCGGG
M6559_1.02 ZNF589 chr12 - 108004381 108004396 6.79e-05 1 CCCAGGGGATCAAGCA
M6559_1.02 ZNF589 chr17 - 79294595 79294610 6.83e-05 1 GCAAAGGTATCTAGCG
M6559_1.02 ZNF589 chr1 + 146039533 146039548 6.83e-05 1 ACAGCGGCTACTGTCC
M6559_1.02 ZNF589 chr12 + 94879679 94879694 6.87e-05 1 AACAAGGGATTTACCC
M6559_1.02 ZNF589 chr1 - 183472011 183472026 6.99e-05 1 CCCACCGGAAACGCCG
M6559_1.02 ZNF589 chr19 + 5081429 5081444 7.11e-05 1 CACAAGGCTGTAGCCC
M6559_1.02 ZNF589 chr10 - 69892122 69892137 7.15e-05 1 GACAGGGGATCTATCC
M6559_1.02 ZNF589 chr18 + 48607102 48607117 7.15e-05 1 CAAAGGGCAGCTGCCT
M6559_1.02 ZNF589 chr2 + 29294094 29294109 7.19e-05 1 CCAGGTGTTACCGCCT
M6559_1.02 ZNF589 chrX + 120401318 120401333 7.19e-05 1 accactgctacagcca
M6559_1.02 ZNF589 chr22 + 38916900 38916915 7.23e-05 1 CAGGGGGGTTCTGCCC
M6559_1.02 ZNF589 chr3 + 117323029 117323044 7.27e-05 1 CCCAGGAGTACTGCCC
M6559_1.02 ZNF589 chr5 - 146825139 146825154 7.36e-05 1 CCCAGGGGAACTGACC
M6559_1.02 ZNF589 chr15 + 88605573 88605588 7.36e-05 1 CCCACCGCAATTGCAG
M6559_1.02 ZNF589 chr1 - 22625709 22625724 7.4e-05 1 CCCAGTGGAGCTGTCC
M6559_1.02 ZNF589 chr11 + 47273023 47273038 7.48e-05 1 CCAGCTGTTATTGTCT
M6559_1.02 ZNF589 chr5 + 68555137 68555152 7.53e-05 1 CCCAGCGGTGCAGTCG
M6559_1.02 ZNF589 chr21 - 43880685 43880700 7.57e-05 1 ACAAGGGTAATTGGCA
M6559_1.02 ZNF589 chr16 - 68894409 68894424 7.65e-05 1 TCCAGGGGTATACTCT
M6559_1.02 ZNF589 chrX - 48803140 48803155 7.7e-05 1 GCCAGTGCTTCAGCCT
M6559_1.02 ZNF589 chr20 + 38686092 38686107 7.78e-05 1 CCAGAGGTAAATGCCT
M6559_1.02 ZNF589 chr1 + 205044942 205044957 7.88e-05 1 GACAGGGCTTTTGCCA
M6559_1.02 ZNF589 chr17 + 49368596 49368611 7.92e-05 1 ACAGCGGGTATTGCAG
M6559_1.02 ZNF589 chr1 - 14867436 14867451 8.01e-05 1 CCAACGGTAACTCTAT
M6559_1.02 ZNF589 chr3 + 10136630 10136645 8.01e-05 1 cccaggtgataagccc
M6559_1.02 ZNF589 chr13 + 87498885 87498900 8.1e-05 1 CACAAGGGTACAGCGA
M6559_1.02 ZNF589 chr1 + 168609391 168609406 8.14e-05 1 CACAGGGTATTTGTTG
M6559_1.02 ZNF589 chr2 - 219046152 219046167 8.19e-05 1 CCAGCGGGAGCTGTCC
M6559_1.02 ZNF589 chr20 - 38878978 38878993 8.28e-05 1 TCCAAGGTATCTGCTC
M6559_1.02 ZNF589 chr22 - 39478744 39478759 8.33e-05 1 CCAGGGGCTTCTGGCC
M6559_1.02 ZNF589 chr11 - 123653876 123653891 8.33e-05 1 CCAAAGGGTTTCCTCG
M6559_1.02 ZNF589 chr3 - 62876266 62876281 8.42e-05 1 ACCAGGTTTACTGGCC
M6559_1.02 ZNF589 chr7 - 113488182 113488197 8.47e-05 1 CCGACGGGTGCCACCC
M6559_1.02 ZNF589 chr13 - 46553995 46554010 8.52e-05 1 CCCGCGGTTACTTCCC
M6559_1.02 ZNF589 chr1 - 2468395 2468410 8.57e-05 1 CCCGGGGCTTCCGCCA
M6559_1.02 ZNF589 chr16 - 83701547 83701562 8.66e-05 1 TCCAGGGTTTTAGTTG
M6559_1.02 ZNF589 chr11 + 68122211 68122226 8.66e-05 1 CACGGGGCTACTGGCG
M6559_1.02 ZNF589 chr15 - 74265237 74265252 8.76e-05 1 CAAGGGGTTTCAGCAC
M6559_1.02 ZNF589 chr19 + 35881957 35881972 8.76e-05 1 cccagggcttctggac
M6559_1.02 ZNF589 chr8 + 26209936 26209951 8.81e-05 1 acaactgtttcagcac
M6559_1.02 ZNF589 chr19 + 28377420 28377435 8.86e-05 1 cacagggtttcaccat
M6559_1.02 ZNF589 chr17 + 45702856 45702871 9.06e-05 1 AGAAGGGGTTCTGTCC
M6559_1.02 ZNF589 chr20 + 17226635 17226650 9.11e-05 1 CACACCGTAATTCCCT
M6559_1.02 ZNF589 chr22 + 25193966 25193981 9.11e-05 1 GCAACTGCTTCAGTCG
M6559_1.02 ZNF589 chr9 - 127751670 127751685 9.21e-05 1 CCCAGGCTTAATCCCG
M6559_1.02 ZNF589 chr1 - 210343657 210343672 9.21e-05 1 CGCAGGCTTTCAGCCC
M6559_1.02 ZNF589 chr17 + 60140119 60140134 9.21e-05 1 ACCGCGGGTTTCACCC
M6559_1.02 ZNF589 chr15 + 89419430 89419445 9.21e-05 1 GAAAGGGCATTTGCCT
M6559_1.02 ZNF589 chr9 - 136964349 136964364 9.31e-05 1 CCCAAGGCAGCAATCG
M6559_1.02 ZNF589 chr5 + 154447250 154447265 9.31e-05 1 TCCTCGGTATCAGCAG
M6559_1.02 ZNF589 chr8 + 25028168 25028183 9.47e-05 1 cccaggtgtactatGG
M6559_1.02 ZNF589 chr17 - 79192853 79192868 9.52e-05 1 CCAAAGGGAGCAGCAG
M6559_1.02 ZNF589 chr12 - 8937977 8937992 9.57e-05 1 CACAGGGTTGATGCCA
M6559_1.02 ZNF589 chr10 + 120131119 120131134 9.57e-05 1 CCAGGGTCTTTTGCCG
M6559_1.02 ZNF589 chr8 - 64380268 64380283 9.68e-05 1 GCAAGGGTAGCAACCA
M6559_1.02 ZNF589 chr10 + 91908971 91908986 9.73e-05 1 TCCGCGGTTTCCGCGC
M6559_1.02 ZNF589 chr5 - 166165623 166165638 9.84e-05 1 CCAAGTGTTTTAACTG
M6559_1.02 ZNF589 chr18 - 47260545 47260560 9.89e-05 1 CCGGCGGTTTCAGCAC
M6559_1.02 ZNF589 chr14 - 63045536 63045551 9.89e-05 1 GCCGCGGTAGCAGCCT
M6559_1.02 ZNF589 chr11 - 134476627 134476642 9.94e-05 1 TGAAGGGTTTCAGCAG
M6559_1.02 ZNF589 chr7 + 78621228 78621243 9.94e-05 1 TCCAAGGGAATTATCT
M6559_1.02 ZNF589 chr2 + 229715038 229715053 9.94e-05 1 CACAGCGCTTCTCCCG
M6559_1.02 ZNF589 chr10 + 114649563 114649578 0.0001 1 CAAAGGGTTTCTCTAG
M6559_1.02 ZNF589 chr3 + 194101534 194101549 0.0001 1 CCCAGGGTCACAGTCC

DEBUGGING INFORMATION

Command line:

/software/meme/4.12.0/bin/fimo --parse-genomic-coord --verbosity 1 --oc /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/REST.IDR0.05.filt.narrowPeak.top3000.summitPlusMinus250bp.MemeChipResultsDefaultMax/fimo_out_18 --bgfile /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/REST.IDR0.05.filt.narrowPeak.top3000.summitPlusMinus250bp.MemeChipResultsDefaultMax/background --motif M6559_1.02 /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/MotifData/motif_databases/CIS-BP/Homo_sapiens.meme /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/REST.IDR0.05.filt.narrowPeak.top3000.summitPlusMinus250bp.MemeChipResultsDefaultMax/REST.IDR0.05.filt.narrowPeak.top3000.summitPlusMinus250bp.fa

Settings:

output_directory = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/REST.IDR0.05.filt.narrowPeak.top3000.summitPlusMinus250bp.MemeChipResultsDefaultMax/fimo_out_18 MEME file name = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/MotifData/motif_databases/CIS-BP/Homo_sapiens.meme sequence file name = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/REST.IDR0.05.filt.narrowPeak.top3000.summitPlusMinus250bp.MemeChipResultsDefaultMax/REST.IDR0.05.filt.narrowPeak.top3000.summitPlusMinus250bp.fa
background file name = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/REST.IDR0.05.filt.narrowPeak.top3000.summitPlusMinus250bp.MemeChipResultsDefaultMax/background alphabet = DNA max stored scores = 100000
allow clobber = true compute q-values = true parse genomic coord. = true
text only = false scan both strands = true max strand = false
threshold type = p-value output theshold = 0.0001 pseudocount = 0.1
alpha = 1 verbosity = 1

This information can be useful in the event you wish to report a problem with the FIMO software.


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