Database and Motifs High-scoring Motif Occurences Debugging Information



FIMO - Motif search tool

FIMO version 4.12.0, (Release date: Tue Jun 27 16:22:50 2017 -0700)

For further information on how to interpret these results or to get a copy of the FIMO software please access http://meme.nbcr.net

If you use FIMO in your research, please cite the following paper:
Charles E. Grant, Timothy L. Bailey, and William Stafford Noble, "FIMO: Scanning for occurrences of a given motif", Bioinformatics, 27(7):1017-1018, 2011. [full text]


DATABASE AND MOTIFS

DATABASE /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/REPIN1.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/REPIN1.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa
Database contains 600 sequences, 300000 residues

MOTIFS /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/REPIN1.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/meme_out/meme.xml (DNA)

MOTIF WIDTH BEST POSSIBLE MATCH
TATTATTATTDTTWTT 16 TATTATTATTATTATT
ACAMAMACAMAMACAMAMAYAM 22 ACACACACACACACACACACAC
TTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCT 38 TTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCT
CCAGCTACTYRGGAGGCTGAGGCAGGAGAATCGCTTGAACCYRGGAGGC 49 CCAGCTACTCGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCGGGAGGC
RRGAGRVARRRARAGR 16 GGGAGAGAGAGAGAGA
RACAGAGYGARACYCYGTCTCW 22 AACAGAGCGAGACTCCGTCTCA
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA 43 GCCAGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGA
CYCCSCBVCCKCCKCYSCCBCC 22 CCCCCCCCCCGCCTCCGCCTCC
ACACACACACAC 12 ACACACACACAC
WTDTAYTATCTHAYTTAATBYTHABAAYAW 30 TTGTATTATCTCATTTAATTTTCACAACAA

Random model letter frequencies (/srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/REPIN1.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/background):
A 0.208 C 0.292 G 0.292 T 0.208


SECTION I: HIGH-SCORING MOTIF OCCURENCES

Motif ID Alt ID Sequence Name Strand Start End p-value q-value Matched Sequence
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr19 - 16292528 16292570 1.22e-25 6.69e-20 GCCAGGCGCGGTGGCTCACACCTGTAATCCCAGCACTTTGGGA
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr19 + 35536298 35536340 5.32e-25 1.46e-19 gccaggcgcagtggctcacacctgtaatcccagcactttggga
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr19 - 44259753 44259795 1.72e-24 3.15e-19 GCCAGGTGCAGTGGCTCACGCCTGTAATCCCAGCACTTTGGGA
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr17 + 7616656 7616698 3.81e-24 5.23e-19 gcccggcgcggtggctcacgcctgtaatcccagcactttggga
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr19 - 34218259 34218301 1.44e-23 1.58e-18 GCCAGGCGCGGTGGCTCACGCCTGTAACCCCAGCACTTTGGGA
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr1 - 236090279 236090321 3e-23 2.75e-18 GCCAGGTGCAGTGGCTCATGCCTGTAATCCCAGCACTTTGGGA
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr19 + 40556644 40556686 2.07e-22 1.53e-17 gccaggtgtggtggctcatgcctgtaatcccaacactttggga
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr6 + 28796195 28796237 2.23e-22 1.53e-17 gccgggtgcagtggcttatgcctgtaatcccagcactttggga
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr19 - 35535995 35536037 3.11e-22 1.9e-17 GCCAGGCGTGGTGGCTCACACCTGTAATCCTGGCACTTTGGGA
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr19 + 43492997 43493039 3.36e-21 1.78e-16 gccaggcacagtggctcacacctgtaatcccagcactttggga
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr5 + 181218548 181218590 3.69e-21 1.78e-16 gccgggcgcggtggttcacgcctgtaatcccagcactttggga
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr7 - 139340138 139340180 3.9e-21 1.78e-16 GCCGGGCGTGGTGGCGCACGCCTGTAATACCAGTACTTTGGGA
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr16 - 234345 234387 1.17e-20 4.97e-16 GCCGGGGGCGGTGGCTCACGCCTGTAATTCCAGCACTTTGGGA
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr22 - 24805673 24805715 1.43e-20 5.6e-16 GCCGGTCGCGGTGGCTCACGCCTGTAATCCCAACACTTTGGGA
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr17 - 75368478 75368520 3.43e-20 1.26e-15 GCCTGACGCAGTGGGTCACGCCTATAATCCCAGCACTTTGGAG
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr12 - 120201739 120201781 3.91e-20 1.34e-15 GCCGGGCGCGGCGGGTCACGCCTGTAATCCCAGCACTTTGGGA
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr6 - 27603749 27603791 5.17e-20 1.67e-15 GCCGGGCGCGGTGGCTCACGCCTGTAGTCCCGCCCCTTTGGGA
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr1 - 26329990 26330032 2.12e-19 6.46e-15 GCCGGGCGTGTTGGCTCACGCCTGTAGTTCCAGCACTTTGGGA
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr1 - 26330031 26330073 5.51e-19 1.59e-14 GCCAAGTGCAGTGGCTTGTACCTATAATTCTAGCACTTTGGGC
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr10 + 23411589 23411631 7.79e-19 2.11e-14 gctgggcacggtggctcacacctgtaatcccagcactttggga
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr12 + 54188346 54188388 8.06e-19 2.11e-14 gccgggcgcggtggctcacacccgtaatccgagcactttggga
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr1 - 36256137 36256179 8.58e-19 2.14e-14 GCCAGGTGTGGTGGCTTACAACGATAACCCCAACATTATGGGA
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr19 + 45439416 45439458 1.17e-18 2.81e-14 gccgggtgcagtggctcaggcctttaatcccagcactttggga
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr19 + 40286101 40286143 2.24e-18 5.13e-14 gccgggcgcggtggctcactcctgtaatcctagcacttgggga
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr6 + 27231266 27231308 2.86e-18 6.29e-14 gccgagcgtggtggctcacggctgtaatgccagcactttggga
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr6 + 28790369 28790411 3.22e-18 6.81e-14 gccgagcgctgtgtcttacgcctgtaatcccagcactttggga
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr1 + 44487551 44487593 4.69e-18 9.55e-14 gccgagcatggtggctcccacctgtaatcccagcactttggga
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr19 + 40634848 40634890 6.17e-18 1.2e-13 gcttggcgtggtggcccacacctgtaatcctagcactttggga
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr1 + 61692614 61692656 6.35e-18 1.2e-13 gccaggcacagtgactcatgcctgtaatcccaacactttggga
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr1 - 230167402 230167444 9.89e-18 1.81e-13 GCTGGGAGTGGTGGCTCACGACTGTAATCCTAGCACTTTGGGA
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr9 + 129824317 129824359 1.39e-17 2.47e-13 gccaggcatggtggctcctgcctgtaatcccagccctttggga
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr17 - 59209803 59209845 1.48e-17 2.55e-13 GACTACTGCGGTGGCTCACGCCTGTAATCCTAGCACTTTGGGA
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr7 - 66920743 66920785 2.98e-17 4.96e-13 ACCAGGCGCGGTGGCTCAGGCCTGTAATCTCAGCACTTTGGGA
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr19 + 43682550 43682592 4.88e-17 7.89e-13 gctgggtgtgctggctcatgcctgtaatcctaacactttggga
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr21 - 39384515 39384557 7.49e-17 1.18e-12 GCCAGGTGTGGTGGCTCACAGCTGTAATCTCCGCACTTTGGGA
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr19 - 43576174 43576216 8.47e-17 1.29e-12 GCCCAGCGCAGTCGCTCACGCCTGTAGTTCCAGCACTTTGAGA
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr12 + 49289660 49289702 8.78e-17 1.3e-12 gccgggggctgtggttcatgcctgtaatcccagcactttggga
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr19 + 39033191 39033233 2.6e-16 3.76e-12 gctgggtgcggtgactcatgcccgtaatcccagcactttggga
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr1 + 155194024 155194066 5.22e-16 7.36e-12 GCGTggcacggtggctcacgcccgtaatcccaacactttggaa
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr10 + 5853825 5853867 2.8e-15 3.85e-11 gctgggcacagtggctcacacatgtaatccgagcactttggga
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr8 + 43093803 43093845 3.16e-15 4.24e-11 gcccggcgaggtggctccagcctgtaatcccagcgctttggga
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr12 - 2813157 2813199 5.31e-15 6.95e-11 GTCGGGCGTGGTGGCGGGCGCCTGTAATCCCAGCCCCTTGGGA
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr11 + 59557621 59557663 6.41e-15 8.2e-11 accgggcgtggtggctcatgtctgtaatgccagcgctttggga
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr19 + 13727651 13727693 1.3e-14 1.63e-10 gctggacgaggcagctcatgcctgtaatcccagcactttggga
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr3 - 183107663 183107705 1.46e-14 1.78e-10 GCCAGGCGTGGTGGCATGCGCCTGTAATCCCAGCTACTTGGGA
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr6 + 28790503 28790545 2.66e-14 3.18e-10 gccaggcgtggtggcgcatgcctgtaatcccagctactcggga
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr19 - 40509177 40509219 9.21e-14 1.08e-09 GCCAGGGACAATGGCTCACGTCTGTAATCCCAACACTCTGGGA
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr20 - 48921154 48921196 1.03e-13 1.17e-09 GCCCGGCGCGGCGGCTCACGCCTCTAATCCCAGCGCTTCCGGA
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr16 - 30408927 30408969 1.27e-13 1.43e-09 GCCAGGTGTAGTGGTGCATGCCTGTAGTCCCAGCTACTTGGGA
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr22 + 29602802 29602844 7.97e-13 8.76e-09 gccgggcgtggtgacgcatacctgtaatcccagctactcggga
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr7 - 139340004 139340046 8.17e-13 8.78e-09 GCCGGGCGTGGTGGCGCATGCCTGTAATCCCAGCTACTCCGGA
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr5 - 150460148 150460190 8.3e-13 8.78e-09 GCCGGGCGTGGTGGCACGTGCCTGTAATCCCAGCTACCTGGGA
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr10 + 92592491 92592533 1.12e-12 1.16e-08 gccgggcgtggtggcacgcacctgtaatcccagctactcgggg
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr1 + 226790524 226790566 1.22e-12 1.24e-08 actaggcacagtgtctcacacttgtcatcccagcactttggga
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr22 + 39399348 39399390 2.41e-12 2.41e-08 gccgggcgtggtggctcatgcctgtagtcccggctactccgga
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr8 - 33513864 33513906 3.28e-12 3.22e-08 GCTGGGCGTGGTGGCGCGCGCCTATAGTCCCAGCTACTCGGGA
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr1 - 26329866 26329908 4.21e-12 4.06e-08 GCCGGGCATGATGGCACATGCCTGTAATCCCAGCTACTTGGGA
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr5 - 149755764 149755806 4.31e-12 4.09e-08 GCTGGGCATGGTGGCGGACACCTATAATCCCAGCTACTTGGGA
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr22 + 32472921 32472963 5.38e-12 4.93e-08 gccaggtgtggtggcgggtgcctgtagtcccagctactcggga
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr19 + 35910496 35910538 5.38e-12 4.93e-08 gcctggcgtggtggcgcgtgcctgtaattccagctactcagga
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr2 + 61136824 61136866 7.03e-12 6.25e-08 gccaggcgtgatggcaggtgcctgtaatcccagctacttggga
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr19 + 35910362 35910404 7.05e-12 6.25e-08 gccaagcgcggtggatcacgcctgtaatccaacactttggaag
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr19 - 34478772 34478814 8.65e-12 7.54e-08 GCTGGGTGTAGTCGTGCACGCCTGTAATCCCAGCTACTTGGGA
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr19 + 43493132 43493174 8.9e-12 7.64e-08 gccaggcttggtggcgcatgcctgtaatcccagctactcagga
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr19 - 43576022 43576064 1.12e-11 9.46e-08 GCCGAATGTGGTGGCGCGTGCGTGTAATCCCAGCTACTTAGGA
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr5 - 35617595 35617637 1.22e-11 1.01e-07 GCAGGGCTCCGTGGCTCACGCAAATAATCCTACCACTTTGTGG
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr1 - 36256346 36256388 2.83e-11 2.32e-07 GCCAGGCGTGGTGGCGGGCGCCTGTAGTCCCAGCTACTCAGGA
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr6 - 42565681 42565723 2.93e-11 2.37e-07 GCCGGGCGTGGTGGTGCATGCCTGTAATCCCAGCTACTCGAGG
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr6 - 27603611 27603653 3.31e-11 2.63e-07 GCCAGGCATGGTAGCGCGCGCCTGTAGTCCCAGCTACTCGGGA
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr12 + 54188477 54188519 3.65e-11 2.86e-07 gctgggcatggtggcgcgcgcctgtaatcccacctactcggga
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr17 + 7616478 7616520 3.97e-11 3.03e-07 gctgggcgtggtggcgggcgcctgtagtcccagctactcggga
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr1 - 173825589 173825631 3.97e-11 3.03e-07 GCCGGGCGTGGTCGCGGGCGCCTGTAGTCCCAGCTACTCGGGA
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr6 + 27231402 27231444 4.16e-11 3.13e-07 gccgagggtggtggcatgcgcctgtaaccccagctactcggga
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr1 + 155244253 155244295 4.54e-11 3.37e-07 gccgtgcgtggtggcgggtgcctgtaatcccacgtacttggga
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr1_KI270713v1_random - 20535 20577 6.9e-11 5.06e-07 GCCGGGCGCAGTGGTGTGTGTCTGTAATCCCAACTACTCGGGA
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr19 + 39033326 39033368 7.72e-11 5.58e-07 gctgggcgtggtagcacgcgcctgtaatcccagctaatttgga
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr6 - 27603921 27603963 1.16e-10 8.3e-07 GCTGGGCGTGGTGGGACGCGCCTGTAATCCCAACTACTTGAAG
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr11 + 59557759 59557801 1.23e-10 8.64e-07 gccgggcgtggtagcgagcccctgtaatcccagctacttagga
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr8 + 37538132 37538174 1.27e-10 8.84e-07 gccgggcgtgatggctggtgcctgtaatctcagctacctggga
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr21 - 39384377 39384419 1.38e-10 9.36e-07 GCTAGGTGTGGTGGTGCATGCATGTAATCCCAGCTACTCGGGA
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr17 + 7616789 7616831 1.38e-10 9.36e-07 gctgggcatggtggtgcatgcctgtaaacccagctacttggga
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr19 - 16292752 16292794 1.44e-10 9.65e-07 GCTGGACGTGGTGGCGGGTGCCTATAACCCCAGCTACTCGGGA
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr2 + 61137005 61137047 1.48e-10 9.82e-07 taataataatgaggctcacacctgtaatcccaacactttggga
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr12 + 123457744 123457786 2.14e-10 1.4e-06 gccgggcgtggtggcgggcgccagtaatcccagctacgcggga
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr21 + 36123060 36123102 2.44e-10 1.57e-06 gccaggcttggtggtgcacacctgtagtcccaactgctcagga
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr1 + 235688838 235688880 2.7e-10 1.72e-06 gctgggtgtggtggcacgcacctgtagtcccaggtactaggga
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr1 - 236090144 236090186 2.78e-10 1.76e-06 GCCGGACGTGGTGGCAGGTGCCTGTAATCCCAGCTACTCAGGA
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr8 - 43094157 43094199 2.96e-10 1.85e-06 GCCGGGCGTGGTGGCGGACGCCTGTAATCCCAGGAGCCAAGAC
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr8 - 65732119 65732161 3.2e-10 1.97e-06 GCTGGGCATGGTGGCGGGTGCCTGTAATCCCAGCTACCTGGGA
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr19 + 13727388 13727430 4.17e-10 2.54e-06 gccgggcgtggtggtgggcacctgtaaccccagctactcagga
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr12 - 56190583 56190625 4.25e-10 2.57e-06 GCCAGGTATGGTGACGCATGCCTGTGGTCCCAGCTACTCGGGA
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr15 + 73738536 73738578 5.33e-10 3.19e-06 gctaggcgtggtgacgcatgcctgtagtcccagttgctctgga
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr12 - 120201601 120201643 6.55e-10 3.87e-06 GCCGAGCACGGTGGCGGGCGCCTGTAGTCCCAGCTACTCCGGA
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr1 + 44487733 44487775 7.16e-10 4.19e-06 gctgagcatggtggcacacacctgtaatcccagctactcagga
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr19 - 44259619 44259661 7.31e-10 4.23e-06 GCTGGGCGTGGTGGCACATGCCTGTAATCCCAGCTACTCCAGA
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr9 + 129824451 129824493 1.05e-09 6.03e-06 gccgggtgtggtggtaggcacctgtagccctagctactgggga
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr5 + 160008697 160008739 1.08e-09 6.13e-06 gctgggcgtggtggcgcgcacctgtggtcccagctactcgtaa
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr19 + 40567147 40567189 1.28e-09 7.2e-06 gccaggcgtgatggcacgtgcctgtagtcccagctactcagag
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr1 + 19642594 19642636 1.64e-09 9.09e-06 gctgggcgtggtggtgggcgtctgtaatcccagctactcggga
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr6 + 27214931 27214973 1.74e-09 9.56e-06 gccgggagtggtggcgcgcgcctgtaatcccagatactcaaga
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr10 + 13298993 13299035 2.33e-09 1.27e-05 gcctggcatcgtggcgcaaccctgtagtcccaactacttagga
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr19 + 43682277 43682319 2.5e-09 1.35e-05 gccaggcatggtggtgggtgcctgtaatccctgctactcggga
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr2 + 61137131 61137173 4.45e-09 2.38e-05 gcggggcatggtggtgtatgcctgtagtcccagctactcagga
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr16 + 40714 40756 5.72e-09 3.02e-05 gccaggcatggtagcacatgcctggaatcccagctactcagga
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr19 - 35947735 35947777 7.57e-09 3.96e-05 GTCGGGCGTGGTGGCAGGCGCCTGTAATCCCAGCTACTCAAGA
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr10 + 23411383 23411425 8.84e-09 4.59e-05 gccaggcctaatggtacactcctgtaatcccaactacacggga
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr17 - 75368336 75368378 9.77e-09 5.02e-05 GCTGAGCACGGTGGGGGGCGCCTGTAATCCCACCTACTCAGGA
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr2 - 235741874 235741916 1.37e-08 6.98e-05 GCCAGGCGTGGTAGCAGGCGCCCGTAGTCCCAGCTACTCAGGA
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr1 - 151012893 151012935 1.63e-08 8.22e-05 GCCGGGTGTGGTGGCAGGTGCCTGTAATCTCAGCTACTCCAGA
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr19 - 34973756 34973798 1.74e-08 8.71e-05 GCCGGGCGTAATGGTGGGAGCCTGTAATCCCAGCTACTCTGGA
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr21 + 31582186 31582228 1.88e-08 9.3e-05 gttgggcatggtggcacgcacctgtagtcccagctactcagga
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr5 + 43064467 43064509 3.14e-08 0.000154 ggtggcagtggtggcgtgtgcctgtaatcccagctactcagga
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr19 - 49987128 49987170 3.22e-08 0.000156 GCCGGGCACGGTGGTTCACGCCTTAATCCCAGCACTTTGGGAG
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr19 - 38954836 38954878 3.49e-08 0.000168 GGCAGGCGCAGTGGCTCACGCCTGTTAATCCCAACACCTTGGG
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr19 + 50356810 50356852 5.38e-08 0.000257 gtcaagcatggtggcccacgcctgtggtcccggctacacgtga
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr19 - 40719610 40719652 7.19e-08 0.000341 GCCAGGTGTGGTGGCGGGCACCTGGTGTCTCACCTACTCAGGA
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr16 - 24970996 24971038 1.42e-07 0.000666 GCTGGACGTGGTGATGCAGGCCTGTAATCCCACCTACTTCAGT
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr1 + 155194158 155194200 2.99e-07 0.00139 gccgagcgtggtggcgggcgctgtaaccccagctactcaggag
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr17 - 75368665 75368707 3.08e-07 0.00142 GCCGGGCATGGTTGCATGTGCCCGTAGTCCCTGCTACTCAGGA
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr19 - 38955051 38955093 3.86e-07 0.00177 GCTGGGCATGGTGGTGGGCGCCTGTAGTCTCAGTTACCCGGGA
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr20 + 37178022 37178064 4.53e-07 0.00206 TCTCTTTAaaatgggattagcctgtaatctcagcactttggga
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr1 + 144551654 144551696 5.13e-07 0.00231 TCCTATTTTGCAGGCTTCTGACTGTAACAGTAACACTTAAGGG
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr20 + 37178159 37178201 8.58e-07 0.00384 gctgggcgtggtgtcgcaaggcagcagtcccagctactccgga
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr16 + 84145812 84145854 9.26e-07 0.00411 ccgggtgcggtggctcaacgcctgtaattccagcactttggga
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr22 + 39399394 39399436 3.35e-06 0.0147 tggggcaggagaggcgggcacctgtaatcccagctactcggga
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr3 + 4987521 4987563 4.69e-06 0.0204 ACAGAGCCGAGTTGTTAATGACTATAATAGTACAAATATGGAT
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr19 - 49987129 49987171 6.35e-06 0.0275 GGCCGGGCACGGTGGTTCACGCCTTAATCCCAGCACTTTGGGA
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr10 + 70145905 70145947 6.88e-06 0.0295 GCCGAAAGGGGAGCCGCAGACCAGCAATGGCGCACCCTTGGGC
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr1 - 11298080 11298122 7.78e-06 0.0331 GCTGGGCATGGTGGTGCATGCTGTAATCCCAGCTATTCGGGAG
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr12 - 106358024 106358066 9.44e-06 0.0399 GCCCGGCGCATGCGCACAAACCGCCAGCCCGCCCCCTTGGCGG
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr5 + 181218684 181218726 1.06e-05 0.0445 tccgggcgtggtggcggccgcctgtagtccactcgggaggctg
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr22 - 24555667 24555709 1.13e-05 0.0471 GCGGGGCTTGGGCCCTCAGACCGGGGACAGCAGGAGGTTGGGC
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr19 - 38832174 38832216 1.43e-05 0.0593 CTTGGACATTTCAGCTGTCGCCTATTATTCCACCATTATGAAA
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr6 - 2634321 2634363 2.79e-05 0.115 GCGCGGCGTGGCGGGGCGGGAAAACGGCTCTGTCCCGTGGGGC
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr1 - 230868252 230868294 2.97e-05 0.121 GCCTGGTGGGGCCGCGCGCCCCGGCGCCCCGAGACCCCGGGGA
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr20 + 44476125 44476167 3.04e-05 0.123 GCCGGAAGTGGGGGCCTCGGAAGGTTGTCCACGGGATATGGGG
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr1 - 26330222 26330264 3.1e-05 0.124 TCCCTATTAAGTGGGGGATAATAATAGCTTCTACCTTATAGGG
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr19 - 35947375 35947417 3.17e-05 0.126 GCTCAGTGCAGTGGCGCAATCCTAGCTCACTGCAGCCTCGAAC
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr22 - 24555962 24556004 3.4e-05 0.134 AGCGAATGGCGGGCCTAACACCCAGAATTCCACTCTTTCCCAA
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr1 + 244969897 244969939 3.62e-05 0.142 ggaggaggccgggccgcgggCTGGTTCTATCACCCCCTTGGGA
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr17 - 14309164 14309206 3.71e-05 0.145 CCGAGGCCGGGTGGCTCGGAGCCATTTTCCCCGCCCGTGGTAG
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr7 - 129054764 129054806 4.06e-05 0.157 AATCAGAGCCGTCGCTACCGCCACTACCGCCACCACCATGGAA
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr7 + 108569869 108569911 4.24e-05 0.162 TTCTGAGGTGGTGGCGCCAGCGGCTACCTCCTGCCTGTGAGGA
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr16 + 89817050 89817092 4.26e-05 0.162 GAGACCgcgcggtagccgcgcctgtattcccagcgctttggga
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr10 - 17201447 17201489 4.26e-05 0.162 GCGAGACGCAAGGGGCGGACACTGTGGGGCGGACACTGTGGGG
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr19 + 35643544 35643586 4.8e-05 0.18 CCTGGGCGGGGAGCCGCGCACGGACTGTACCATTTCGTGGGGC
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr19 + 35643616 35643658 4.83e-05 0.18 CTGGAACCCGGGGCTGCATGCGGGTGGCACCACCTCTTTGAAG
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr16 + 40906 40948 4.84e-05 0.18 caagctgggcatggtgcgcacctgtagttccagccactcggga
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr19 + 37594632 37594674 5.05e-05 0.186 ACCGAGCCCCAGCCAGGACACCGGTATTCCCAGCACCATACAA
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr22 - 38681779 38681821 5.17e-05 0.189 TCCGGGCGTCGGGGCTTCGGCGGGCATTAGCAGCAGCTGAGAG
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr1 + 148402685 148402727 5.33e-05 0.194 GCGGGGCGGAGGGGTGTGAGCTTATACTTatatttatctggca
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr16 + 84145502 84145544 5.79e-05 0.208 GCCCGGCGTGGAGGAGTCTGCGGGTGACCACGGGAGCGCAGGC
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr20 - 24992446 24992488 5.8e-05 0.208 GCCGAGCGCGTTGTCAGAGTCCTCTCGTTTCATCCCCAAGAAA
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr3 + 129440580 129440622 6.75e-05 0.241 GCCTGAGGTGGTGGCGGGTGGAGGCGGCTCTTCCCTCACGGTC
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr19 + 36666622 36666664 7.07e-05 0.251 CCCGCACTCAGAGGCCTAAAACTATAGACATTCCCTTCCGCGG
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr19 - 44072336 44072378 7.28e-05 0.257 GCCTCATGCCCGGGGACGCGAGGACAGCCCCAAGACCAAGAAG
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr10 - 5889902 5889944 7.4e-05 0.259 GGCGGGGACGGGGGCGGAGCCCAGGAACGCCGGCCCCCAGGGG
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr7 - 102572410 102572452 7.61e-05 0.265 GGAGGGCCGAGGTGCGCGGGCCTGCGGCTGTCGCATTCTGGGG
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr12 + 49289795 49289837 7.82e-05 0.269 gggtgtggtggcgtgcccaggatgtagtcccagctacttggga
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr14 - 93184641 93184683 7.82e-05 0.269 ATCGGTCGCTGTGGCCCCCGAGTGTCCGTCAGAGCCTAGGGGA
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr5 + 149755473 149755515 7.87e-05 0.269 ctcagttctgctagctgttagatgtaaaccctggactgtggac
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr1 + 212791754 212791796 7.97e-05 0.269 CCCCGCCATTTTTCGTCGGAACTGTGGGCGGGGCACTCTGGGA
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr16 + 28945725 28945767 7.99e-05 0.269 CACCTGCTGGCTGTTGTGCGCCTGCAGTCCTGACCTTGGCGGA
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr11 - 78188278 78188320 8.51e-05 0.285 CCCGGATAATGAGGGTCGGGACTGTGGGAGGAGTCCTTGGTGG
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr15 - 70892221 70892263 8.7e-05 0.29 CCGTTGTGTGGCCGCCCACTGCGGCAACACCACCAAGTCTGGG
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr6 + 44247046 44247088 9.38e-05 0.307 GGCGGCTGTACTGTGCTTCGCCTTATATAGGGCGACTTGGGGC
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr19 + 27794268 27794310 9.62e-05 0.307 GTTGGTGGCAGAGCTGCGGGACTACAATCCCAGTATGCTACGG
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr12 - 1085294 1085336 9.71e-05 0.307 GGCCAGGCATAGGCATATTGCCTGTAATCTCAGCACTTTCAAC
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr12 - 1085362 1085404 9.71e-05 0.307 GGCCAGGCATAGGCATATTGCCTGTAATCTCAGCACTTTCAAC
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr12 - 1085427 1085469 9.71e-05 0.307 GGCCAGGCATAGGCATATTGCCTGTAATCTCAGCACTTTCAAC
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr12 - 1085498 1085540 9.71e-05 0.307 GGCCAGGCATAGGCATATTGCCTGTAATCTCAGCACTTTCAAC
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr12 - 1085566 1085608 9.71e-05 0.307 GGCCAGGCATAGGCATATTGCCTGTAATCTCAGCACTTTCAAC
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr12 - 1085634 1085676 9.71e-05 0.307 GGCCAGGCATAGGCATATTGCCTGTAATCTCAGCACTTTCAAC
GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA MEME-7 chr12 - 1085703 1085745 9.71e-05 0.307 GGCCAGGCATAGGCATATTGCCTGTAATCTCAGCACTTTCAAC

DEBUGGING INFORMATION

Command line:

/software/meme/4.12.0/bin/fimo --parse-genomic-coord --verbosity 1 --oc /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/REPIN1.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/fimo_out_6 --bgfile /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/REPIN1.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/background --motif GCCRGGCGCGGTGGCTCACRCCTRTAATCCCAGCACTTTGGGA /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/REPIN1.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/meme_out/meme.xml /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/REPIN1.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/REPIN1.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa

Settings:

output_directory = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/REPIN1.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/fimo_out_6 MEME file name = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/REPIN1.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/meme_out/meme.xml sequence file name = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/REPIN1.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/REPIN1.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa
background file name = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/REPIN1.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/background alphabet = DNA max stored scores = 100000
allow clobber = true compute q-values = true parse genomic coord. = true
text only = false scan both strands = true max strand = false
threshold type = p-value output theshold = 0.0001 pseudocount = 0.1
alpha = 1 verbosity = 1

This information can be useful in the event you wish to report a problem with the FIMO software.


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