# WARNING: this file is not sorted! # db id alt consensus E-value adj_p-value log_adj_p-value bin_location bin_width total_width sites_in_bin total_sites p_success p-value mult_tests 1 TATTTATTTATTTATTTATTTATT MEME-1 TATTTATTTATTTATTTATTTATT 4.9e-092 6.6e-095 -216.86 0.0 35 477 98 109 0.07338 2.8e-097 238 1 GTAACAAAYAAMCCCA MEME-2 GTAACAAAYAAMCCCA 2.0e-208 2.7e-211 -484.87 0.0 63 485 356 465 0.12990 1.1e-213 242 1 TGTATCAGTYAGCTWT MEME-3 TGTATCAGTYAGCTWT 5.7e-099 7.6e-102 -232.84 0.0 91 485 244 332 0.18763 3.1e-104 242 2 RTAACAA DREME-1 GTAACAA 1.3e-141 1.8e-144 -331.01 0.0 68 494 234 287 0.13765 7.1e-147 246 2 CTRATACA DREME-2 CTGATACA 4.2e-061 5.6e-064 -145.64 0.0 99 493 128 149 0.20081 2.3e-066 246 2 AAATAAAT DREME-3 AAATAAAT 1.0e-062 1.4e-065 -149.34 0.0 49 493 102 145 0.09939 5.7e-068 246 2 CAGCAD DREME-4 CAGCAD 1.6e-010 2.2e-013 -29.15 0.0 103 495 167 448 0.20808 8.8e-016 247 2 CCCARA DREME-5 CCCAAA 6.6e0000 8.9e-003 -4.73 0.0 71 495 84 379 0.14343 3.6e-005 247 2 TGAGWCA DREME-6 TGAGWCA 3.0e-005 4.0e-008 -17.04 0.0 166 494 118 215 0.33603 1.6e-010 246 2 TAGCTRA DREME-7 TAGCTRA 8.7e-019 1.2e-021 -48.21 0.0 64 494 61 118 0.12955 4.7e-024 246 2 CAGTGRC DREME-9 CAGTGRC 4.4e-004 5.9e-007 -14.35 0.0 236 494 132 192 0.47773 2.4e-009 246 2 GGGYGAC DREME-11 GGGTGAC 4.0e-003 5.4e-006 -12.13 0.0 118 494 52 107 0.23887 2.2e-008 246 3 M0104_1.02 (ARID3B)_(Mus_musculus)_(DBD_0.99) AWATTAATWAN 1.8e-005 2.4e-008 -17.53 0.0 48 490 92 471 0.09796 1.0e-010 244 3 M0307_1.02 (ENSG00000250542)_(Mus_musculus)_(DBD_1.00) WWACGTWD 2.0e0000 2.7e-003 -5.92 0.0 91 493 107 392 0.18458 1.1e-005 246 3 M0413_1.02 (ZBTB1)_(Mus_musculus)_(DBD_0.99) NDTGCGKGDN 6.4e0000 8.5e-003 -4.77 0.0 15 491 33 496 0.03055 3.5e-005 245 3 M0436_1.02 (ZNF35)_(Mus_musculus)_(DBD_0.96) TTRTTKDHYN 1.0e-030 1.4e-033 -75.67 0.0 89 491 228 558 0.18126 5.6e-036 245 3 M0437_1.02 (ZNF32)_(Mus_musculus)_(DBD_0.99) TATRTATRT 4.1e-017 5.5e-020 -44.35 0.0 50 492 105 371 0.10163 2.2e-022 245 3 M0607_1.02 KDM2B NCGNWNNNN 1.3e-018 1.7e-021 -47.80 0.0 70 492 29 30 0.14228 7.1e-024 245 3 M0629_1.02 DMRT3 MATGTATCAAN 3.8e-040 5.1e-043 -97.38 0.0 98 490 248 520 0.20000 2.1e-045 244 3 M0630_1.02 DMRT1 WWTGTWDCNW 8.1e-023 1.1e-025 -57.49 0.0 77 491 190 546 0.15682 4.4e-028 245 3 M0632_1.02 DMRTA2 WHWGTWDYNN 7.4e-014 9.9e-017 -36.85 0.0 99 491 106 229 0.20163 4.0e-019 245 3 M0633_1.02 DMRT2 KAATKTATWN 9.3e-028 1.2e-030 -68.86 0.0 47 491 145 513 0.09572 5.1e-033 245 3 M0635_1.02 (DMRTC2)_(Mus_musculus)_(DBD_1.00) NAMATGTATHMWN 1.4e-007 1.9e-010 -22.38 0.0 110 488 195 541 0.22541 7.8e-013 243 3 M0718_1.02 FOXK1 NNRTMAACAH 1.4e-005 1.9e-008 -17.78 0.0 75 491 147 574 0.15275 7.7e-011 245 3 M0719_1.02 FOXG1 RTAAACAW 2.3e-004 3.1e-007 -15.00 0.0 49 493 96 513 0.09939 1.2e-009 246 3 M0728_1.02 (FOXJ1)_(Mus_musculus)_(DBD_1.00) NRTAAACAAANN 1.2e-026 1.6e-029 -66.30 0.0 55 489 166 563 0.11247 6.6e-032 244 3 M0736_1.02 (FOXK2)_(Mus_musculus)_(DBD_0.90) RTAAACAA 1.2e-004 1.6e-007 -15.64 0.0 71 493 137 569 0.14402 6.5e-010 246 3 M0737_1.02 (FOXB2)_(Mus_musculus)_(DBD_0.94) WRWGTAAAYA 4.8e-012 6.5e-015 -32.67 0.0 37 491 105 572 0.07536 2.6e-017 245 3 M0747_1.02 (FOXL2)_(Mus_musculus)_(DBD_0.70) WNNRTAAAYA 1.9e-017 2.5e-020 -45.13 0.0 53 491 147 581 0.10794 1.0e-022 245 3 M0894_1.02 LBX1 TTAATTAG 7.3e-001 9.8e-004 -6.93 0.0 61 493 96 490 0.12373 4.0e-006 246 3 M0896_1.02 VENTX TTAATTAG 9.5e-003 1.3e-005 -11.28 0.0 61 493 102 481 0.12373 5.1e-008 246 3 M0906_1.02 (VTN)_(Mus_musculus)_(DBD_0.79) NMTTAATTAR 2.5e-003 3.3e-006 -12.63 0.0 55 491 86 413 0.11202 1.3e-008 245 3 M0937_1.02 (SIX6)_(Mus_musculus)_(DBD_1.00) HKATMYN 3.9e-008 5.3e-011 -23.67 0.0 94 494 115 314 0.19028 2.1e-013 246 3 M0952_1.02 (SIX2)_(Mus_musculus)_(DBD_1.00) NGATMYNN 2.4e-009 3.2e-012 -26.48 0.0 93 493 150 437 0.18864 1.3e-014 246 3 M0994_1.02 (SIX4)_(Mus_musculus)_(DBD_1.00) NYKAYMCBN 2.0e-001 2.6e-004 -8.24 0.0 72 492 117 521 0.14634 1.1e-006 245 3 M1016_1.02 (SIX3)_(Mus_musculus)_(DBD_1.00) NNDATMY 4.3e-015 5.7e-018 -39.70 0.0 106 494 127 273 0.21457 2.3e-020 246 3 M1049_1.02 (SIX1)_(Mus_musculus)_(DBD_1.00) NYGATAYNNN 5.8e-005 7.7e-008 -16.38 0.0 93 491 160 531 0.18941 3.2e-010 245 3 M1157_1.02 (HOXB9)_(PBM_CONSTRUCTS)_(DBD_1.00) WTTWATKRBN 4.9e0000 6.5e-003 -5.03 0.0 105 491 150 516 0.21385 2.7e-005 245 3 M1266_1.02 (IRF6)_(Mus_musculus)_(DBD_1.00) NVNCGAWACY 9.1e0000 1.2e-002 -4.41 0.0 91 491 143 565 0.18534 5.0e-005 245 3 M1281_1.02 (NAIF1)_(Xenopus_tropicalis)_(DBD_0.71) NNTACGYHN 1.9e-003 2.6e-006 -12.87 0.0 62 492 66 257 0.12602 1.1e-008 245 3 M1581_1.02 (CIC)_(Mus_musculus)_(DBD_1.00) NNTGCTGACW 2.4e-001 3.2e-004 -8.04 0.0 175 491 261 577 0.35642 1.3e-006 245 3 M1582_1.02 (HMG20B)_(Mus_musculus)_(DBD_0.94) NWAWATAATWN 4.6e-013 6.2e-016 -35.01 0.0 128 490 209 466 0.26122 2.5e-018 244 3 M1589_1.02 (SOX30)_(Mus_musculus)_(DBD_1.00) NNDNRACAAT 4.4e-012 5.9e-015 -32.77 0.0 65 491 152 572 0.13238 2.4e-017 245 3 M1592_1.02 (SOX3)_(Mus_musculus)_(DBD_1.00) NNNWCAAT 1.8e0000 2.4e-003 -6.02 0.0 111 493 112 343 0.22515 9.9e-006 246 3 M1594_1.02 (SOX12)_(Mus_musculus)_(DBD_1.00) HWTTGTYNNN 3.1e-007 4.1e-010 -21.62 0.0 107 491 201 585 0.21792 1.7e-012 245 3 M1601_1.02 (SOX11)_(Mus_musculus)_(DBD_1.00) WTTGTBNNN 2.3e-012 3.0e-015 -33.43 0.0 76 492 172 585 0.15447 1.2e-017 245 3 M1863_1.02 FOXD1 GTAAACAW 8.6e-001 1.2e-003 -6.76 0.0 73 493 117 528 0.14807 4.7e-006 246 3 M2267_1.02 CDX2 TTTTATKRCHB 2.1e-002 2.9e-005 -10.46 0.0 112 490 168 510 0.22857 1.2e-007 244 3 M2278_1.02 FOS DVTGASTCATB 1.2e-005 1.6e-008 -17.95 0.0 266 490 361 531 0.54286 6.6e-011 244 3 M2283_1.02 FOXP1 HWWADGTAAACAAAR 1.8e-007 2.4e-010 -22.15 0.0 48 486 107 532 0.09877 1.0e-012 242 3 M2287_1.02 (HOXC9)_(Mus_musculus)_(DBD_0.98) RGCMATAAATCAB 1.0e-015 1.4e-018 -41.13 0.0 164 488 262 481 0.33607 5.6e-021 243 3 M2292_1.02 JUND DRTGASTCATS 1.3e-001 1.7e-004 -8.68 0.0 164 490 220 500 0.33469 7.0e-007 244 3 M2296_1.02 MAFK MWDASTCAGCAWWWW 7.6e-003 1.0e-005 -11.50 0.0 258 486 358 555 0.53086 4.2e-008 242 3 M2385_1.02 FOXP2 RWGTAAACAVR 2.4e-008 3.3e-011 -24.14 0.0 46 490 105 524 0.09388 1.3e-013 244 3 M4452_1.02 BATF TYYYRWWATGASTCA 3.0e-005 4.0e-008 -17.03 0.0 86 486 156 544 0.17695 1.7e-010 242 3 M4476_1.02 RFX5 TCABYWGTTGCYRGG 1.7e-001 2.2e-004 -8.40 0.0 36 486 74 553 0.07407 9.3e-007 242 3 M4509_1.02 POU5F1 ATYTGCATRACAAWGRV 2.0e-006 2.7e-009 -19.73 0.0 70 484 126 481 0.14463 1.1e-011 241 3 M4526_1.02 SMARCC1 DSRVDGTGASTCAKV 2.1e-001 2.8e-004 -8.18 0.0 358 486 441 535 0.73663 1.2e-006 242 3 M4565_1.02 FOSL2 VDGGATGASTCAYH 6.3e-002 8.4e-005 -9.39 0.0 303 487 373 513 0.62218 3.5e-007 243 3 M4567_1.02 FOXA2 NMWRWGTAAACANNN 1.2e-010 1.7e-013 -29.42 0.0 48 486 120 566 0.09877 6.9e-016 242 3 M4572_1.02 MAFF TGCTGACTCAGCAWW 3.2e-002 4.3e-005 -10.05 0.0 288 486 334 473 0.59259 1.8e-007 242 3 M4619_1.02 FOSL1 BGGTGASTCAK 3.0e0000 4.0e-003 -5.52 0.0 288 490 344 507 0.58776 1.6e-005 244 3 M4629_1.02 NFE2 VRTGACTCAGCANWWYB 1.9e-015 2.5e-018 -40.54 0.0 112 484 205 486 0.23140 1.0e-020 241 3 M4681_1.02 BACH2 TGCTGAGTCA 1.8e-014 2.4e-017 -38.26 0.0 305 491 414 513 0.62118 9.9e-020 245 3 M5287_1.02 ALX4 HTAATYNAATTAN 1.7e-016 2.3e-019 -42.93 0.0 30 488 89 457 0.06148 9.3e-022 243 3 M5291_1.02 ARX YTAATTNRATTAN 1.1e-019 1.4e-022 -50.29 0.0 44 488 108 404 0.09016 5.9e-025 243 3 M5294_1.02 BARHL2 NHTAAAYGNY 4.7e-006 6.3e-009 -18.89 0.0 109 491 182 521 0.22200 2.6e-011 245 3 M5300_1.02 BARX1 TAATBGNTWTTTAATBG 1.2e-002 1.6e-005 -11.05 0.0 80 484 98 350 0.16529 6.6e-008 241 3 M5335_1.02 CUX2 ATCGATAHNDTTATYGAT 2.3e-062 3.0e-065 -148.55 0.0 39 483 99 157 0.08075 1.3e-067 241 3 M5348_1.02 DRGX NTAATYHAATTAN 1.2e-014 1.6e-017 -38.65 0.0 28 488 78 422 0.05738 6.8e-020 243 3 M5435_1.02 FOXB1 TCGCYGTGTCATTC 2.4e0000 3.2e-003 -5.74 0.0 103 487 136 459 0.21150 1.3e-005 243 3 M5445_1.02 FOXD2 DRTMAATATTWDYD 3.6e-004 4.8e-007 -14.54 0.0 95 487 148 480 0.19507 2.0e-009 243 3 M5446_1.02 FOXD4L2 RTAAACA 1.7e-020 2.3e-023 -52.15 0.0 62 494 166 570 0.12551 9.2e-026 246 3 M5460_1.02 FOXL1 RTAAACA 4.9e-028 6.6e-031 -69.49 0.0 48 494 155 564 0.09717 2.7e-033 246 3 M5493_1.02 GMEB2 KTRCGTAA 1.2e0000 1.5e-003 -6.47 0.0 65 493 76 350 0.13185 6.3e-006 246 3 M5517_1.02 HMBOX1 MYTAGTTAMS 4.2e-013 5.6e-016 -35.11 0.0 55 491 127 505 0.11202 2.3e-018 245 3 M5544_1.02 HOXC10 DTTTWATKDB 9.1e-001 1.2e-003 -6.71 0.0 75 491 124 552 0.15275 5.0e-006 245 3 M5557_1.02 HOXD12 GTAATAAAA 1.2e0000 1.5e-003 -6.47 0.0 92 492 141 531 0.18699 6.3e-006 245 3 M5581_1.02 IRX2 CDTGTCRTGTWN 3.4e-009 4.6e-012 -26.11 0.0 43 489 107 554 0.08793 1.9e-014 244 3 M5582_1.02 IRX5 SWTGTYRTGTWN 3.2e-017 4.3e-020 -44.60 0.0 53 489 143 563 0.10838 1.8e-022 244 3 M5584_1.02 ISX YTAATCTAATTAR 1.2e-019 1.6e-022 -50.17 0.0 42 488 89 310 0.08607 6.7e-025 243 3 M5587_1.02 JDP2 ATGASTCAT 5.2e-005 7.0e-008 -16.47 0.0 124 492 178 463 0.25203 2.9e-010 245 3 M5604_1.02 LMX1A YTAATTAA 5.5e-001 7.4e-004 -7.21 0.0 111 493 145 456 0.22515 3.0e-006 246 3 M5605_1.02 LMX1B TTAATTRN 6.5e-004 8.7e-007 -13.95 0.0 113 493 179 524 0.22921 3.5e-009 246 3 M5635_1.02 MNX1 TTTAATTRNH 2.3e-007 3.1e-010 -21.90 0.0 107 491 186 530 0.21792 1.3e-012 245 3 M5637_1.02 MSX1 TAATTGSWWTTTAATTGS 9.0e-011 1.2e-013 -29.75 0.0 47 483 86 350 0.09731 5.0e-016 241 3 M5689_1.02 NRL DWWNTGCTGAC 1.4e-003 1.9e-006 -13.19 0.0 238 490 357 592 0.48571 7.7e-009 244 3 M5697_1.02 ONECUT3 DTTATYGATTTTTY 2.9e-024 3.8e-027 -60.83 0.0 61 487 139 405 0.12526 1.6e-029 243 3 M5714_1.02 PHOX2A TAATYYAATTA 5.4e-008 7.2e-011 -23.35 0.0 50 490 96 432 0.10204 3.0e-013 244 3 M5715_1.02 PHOX2B TAATYYAATTA 1.9e-007 2.5e-010 -22.11 0.0 50 490 96 444 0.10204 1.0e-012 244 3 M5740_1.02 POU4F1 ATGMATAATTAATG 9.3e-036 1.2e-038 -87.28 0.0 43 487 143 466 0.08830 5.1e-041 243 3 M5743_1.02 POU4F3 RTGMATWATTAATGAV 1.0e-029 1.4e-032 -73.37 0.0 45 485 135 452 0.09278 5.7e-035 242 3 M5771_1.02 RAX DYTAATTRRY 6.7e0000 8.9e-003 -4.72 0.0 103 491 146 512 0.20978 3.7e-005 245 3 M5835_1.02 SOX7 AACAATRWBCAKTGTT 2.7e-005 3.7e-008 -17.12 0.0 143 485 94 180 0.29485 1.5e-010 242 3 M5941_1.02 UNCX NTAATYBAATTAN 3.6e-007 4.8e-010 -21.45 0.0 66 488 127 506 0.13525 2.0e-012 243 3 M5958_1.02 ZBED1 YATGTCGCGAYAG 9.1e0000 1.2e-002 -4.41 0.0 68 488 31 108 0.13934 5.0e-005 243 3 M6037_1.02 (IRX1)_(Mus_musculus)_(DBD_1.00) TTTKTCATGTWR 1.8e-010 2.4e-013 -29.07 0.0 55 489 120 498 0.11247 9.8e-016 244 3 M6114_1.02 FOXA1 WAWGYAAAYA 4.0e-015 5.3e-018 -39.77 0.0 57 491 144 561 0.11609 2.2e-020 245 3 M6141_1.02 ALX1 TAATBYAATTAB 5.4e-003 7.2e-006 -11.84 0.0 119 489 176 500 0.24335 2.9e-008 244 3 M6147_1.02 ARID3A TWWAWTTTGATWYYVWTTAATH 6.5e-023 8.7e-026 -57.70 0.0 33 479 97 395 0.06889 3.7e-028 239 3 M6163_1.02 BPTF KKTBTTGTKKKS 5.8e0000 7.8e-003 -4.86 0.0 137 489 207 579 0.28016 3.2e-005 244 3 M6186_1.02 DBP KVTTRCATAAB 3.5e-013 4.7e-016 -35.30 0.0 48 490 123 545 0.09796 1.9e-018 244 3 M6197_1.02 E4F1 YGTKACGTC 7.7e0000 1.0e-002 -4.58 0.0 32 492 48 405 0.06504 4.2e-005 245 3 M6228_1.02 FOSB CTGACTCAYV 5.6e-014 7.5e-017 -37.13 0.0 167 491 304 585 0.34012 3.1e-019 245 3 M6234_1.02 FOXA3 RVWAARYAAAYAD 8.6e-022 1.2e-024 -55.12 0.0 72 488 183 555 0.14754 4.7e-027 243 3 M6235_1.02 FOXC1 CYWAAGTAAACAWHG 1.9e-008 2.6e-011 -24.39 0.0 62 486 116 452 0.12757 1.1e-013 242 3 M6237_1.02 FOXD3 AAACAAACA 2.1e-047 2.8e-050 -114.09 0.0 68 492 222 551 0.13821 1.2e-052 245 3 M6238_1.02 FOXF1 WAAATAAACAW 8.6e-039 1.2e-041 -94.26 0.0 96 490 254 555 0.19592 4.7e-044 244 3 M6239_1.02 FOXF2 HWADGTAAACA 4.5e-016 6.0e-019 -41.95 0.0 64 490 152 532 0.13061 2.5e-021 244 3 M6241_1.02 FOXJ2 WAAAYAAAYA 9.5e-040 1.3e-042 -96.47 0.0 57 491 191 553 0.11609 5.2e-045 245 3 M6242_1.02 FOXJ3 TAAACAWWAAMMA 1.2e-019 1.5e-022 -50.23 0.0 60 488 150 508 0.12295 6.3e-025 243 3 M6244_1.02 FOXM1 RWAAWCAMWCAAV 5.3e-015 7.0e-018 -39.49 0.0 62 488 158 589 0.12705 2.9e-020 243 3 M6245_1.02 FOXO1 AAAWWVWAAACAAVHH 1.1e-019 1.4e-022 -50.29 0.0 49 485 139 545 0.10103 5.9e-025 242 3 M6246_1.02 FOXO3 MKGWAAACAARYM 3.9e-017 5.3e-020 -44.39 0.0 64 488 162 566 0.13115 2.2e-022 243 3 M6247_1.02 FOXO4 MRTAAACAA 1.2e-017 1.6e-020 -45.56 0.0 72 492 173 558 0.14634 6.7e-023 245 3 M6249_1.02 FOXP3 AAWCAMATT 4.7e0000 6.3e-003 -5.07 0.0 30 492 60 561 0.06098 2.6e-005 245 3 M6250_1.02 FOXQ1 AAATAAACAATD 6.9e-013 9.3e-016 -34.61 0.0 115 489 192 458 0.23517 3.8e-018 244 3 M6277_1.02 HLF SKRTTACRYAAYH 1.3e-026 1.8e-029 -66.18 0.0 62 488 161 482 0.12705 7.4e-032 243 3 M6281_1.02 HNF1A KGKTAAWBATTAACY 7.6e-006 1.0e-008 -18.40 0.0 50 486 96 464 0.10288 4.2e-011 242 3 M6282_1.02 HNF1B GTTAAWYATTAACY 2.7e-002 3.6e-005 -10.24 0.0 75 487 116 472 0.15400 1.5e-007 243 3 M6285_1.02 ONECUT1 WWTATTGATTTWDH 6.9e-021 9.2e-024 -53.04 0.0 63 487 150 476 0.12936 3.8e-026 243 3 M6289_1.02 HOXA9 WCATAAAYYRTH 1.8e-011 2.4e-014 -31.38 0.0 111 489 203 523 0.22699 9.6e-017 244 3 M6290_1.02 HOXA13 CCAATAAWAHC 3.7e0000 4.9e-003 -5.32 0.0 68 490 108 530 0.13878 2.0e-005 244 3 M6292_1.02 HOXA5 CATTAATYAR 2.1e-002 2.8e-005 -10.50 0.0 115 491 167 494 0.23422 1.1e-007 245 3 M6296_1.02 HOXB6 KKCATMAATCAWT 1.9e-020 2.5e-023 -52.02 0.0 76 488 156 431 0.15574 1.0e-025 243 3 M6297_1.02 HOXB7 MATYAATCAA 1.2e-019 1.6e-022 -50.16 0.0 89 491 174 447 0.18126 6.7e-025 245 3 M6298_1.02 HOXB8 BMATTAATCAA 9.1e-016 1.2e-018 -41.25 0.0 42 490 100 419 0.08571 5.0e-021 244 3 M6299_1.02 HOXC6 AAAGTAATAAATCAT 5.4e-031 7.2e-034 -76.31 0.0 42 486 106 310 0.08642 3.0e-036 242 3 M6301_1.02 HOXD10 AATTAAARCA 6.7e-002 9.0e-005 -9.31 0.0 89 491 149 559 0.18126 3.7e-007 245 3 M6327_1.02 LEF1 CTTTGWW 8.3e-006 1.1e-008 -18.32 0.0 78 494 154 582 0.15789 4.5e-011 246 3 M6329_1.02 LHX3 AAAATTAATTARY 1.6e-009 2.1e-012 -26.87 0.0 100 488 144 382 0.20492 8.8e-015 243 3 M6331_1.02 MAFB WGCTGACDS 2.4e-003 3.2e-006 -12.65 0.0 178 492 282 594 0.36179 1.3e-008 245 3 M6332_1.02 MAF KTGCTGAC 2.1e0000 2.8e-003 -5.89 0.0 251 493 355 595 0.50913 1.1e-005 246 3 M6360_1.02 NFE2L2 VRTGACTCAGCA 6.6e-009 8.9e-012 -25.45 0.0 103 489 202 583 0.21063 3.6e-014 244 3 M6368_1.02 NFIL3 VKVMRTTACRTAAY 2.6e-002 3.4e-005 -10.28 0.0 37 487 58 373 0.07598 1.4e-007 243 3 M6378_1.02 NKX3-1 WWTAAGTATWTWW 2.1e-022 2.8e-025 -56.55 0.0 42 488 122 483 0.08607 1.1e-027 243 3 M6380_1.02 NOBOX HTAATTRSY 7.4e0000 9.9e-003 -4.61 0.0 108 492 149 506 0.21951 4.1e-005 245 3 M6399_1.02 ONECUT2 DKSWTKWTATKGATTTTWYYT 2.7e-013 3.6e-016 -35.57 0.0 42 480 92 389 0.08750 1.5e-018 239 3 M6402_1.02 OVOL1 KGTAACKGT 3.2e-011 4.3e-014 -30.79 0.0 68 492 145 529 0.13821 1.7e-016 245 3 M6413_1.02 PBX2 VMATCAATCAMWTYM 1.6e-017 2.1e-020 -45.32 0.0 84 486 194 563 0.17284 8.6e-023 242 3 M6417_1.02 POU1F1 RWATATTCATKAR 6.5e-001 8.7e-004 -7.05 0.0 36 488 69 529 0.07377 3.6e-006 243 3 M6426_1.02 POU3F2 CATRAATWWT 3.1e-018 4.2e-021 -46.93 0.0 49 491 135 540 0.09980 1.7e-023 245 3 M6429_1.02 POU6F1 CATAAWTTATGCR 9.8e-001 1.3e-003 -6.64 0.0 60 488 65 300 0.12295 5.4e-006 243 3 M6438_1.02 PROP1 RASHAATTAAHWTVR 1.5e0000 2.1e-003 -6.18 0.0 110 486 161 520 0.22634 8.6e-006 242 3 M6471_1.02 SOX13 YATTGTTY 9.2e-012 1.2e-014 -32.03 0.0 79 493 170 565 0.16024 5.0e-017 246 3 M6473_1.02 SOX17 CAAMAATNHHCATTGTCS 1.5e-002 2.0e-005 -10.83 0.0 115 483 122 332 0.23810 8.2e-008 241 3 M6475_1.02 SOX2 WTTTGCATRACAAWGG 1.0e-004 1.4e-007 -15.78 0.0 41 485 90 540 0.08454 5.8e-010 242 3 M6477_1.02 SOX5 WAACAATR 9.8e-017 1.3e-019 -43.48 0.0 95 493 208 568 0.19270 5.3e-022 246 3 M6490_1.02 SRY DAAACAAWR 1.8e-021 2.4e-024 -54.38 0.0 30 492 110 567 0.06098 9.8e-027 245 3 M6506_1.02 TCF7 VHSCTTTGWWST 4.0e0000 5.3e-003 -5.24 0.0 87 489 136 547 0.17791 2.2e-005 244 3 M6509_1.02 TEAD4 AAAAAYAKCYCT 6.0e-009 8.0e-012 -25.55 0.0 95 489 176 528 0.19427 3.3e-014 244 3 M6510_1.02 TEF TGTTTATRTAAMTK 1.6e-010 2.2e-013 -29.16 0.0 49 487 116 526 0.10062 8.9e-016 243 3 M6546_1.02 ZFHX3 ATTAWTAATTA 6.2e-034 8.2e-037 -83.09 0.0 48 490 137 410 0.09796 3.4e-039 244 3 M6555_1.02 ZNF333 SKATAATGA 3.4e0000 4.5e-003 -5.40 0.0 124 492 152 445 0.25203 1.9e-005 245 ## # Detailed descriptions of columns in this file: # # db: The name of the database (file name) that contains the motif. # id: A name for the motif that is unique in the motif database file. # alt: An alternate name of the motif that may be provided # in the motif database file. # consensus: A consensus sequence computed from the motif. # E-value: The expected number motifs that would have least one. # region as enriched for best matches to the motif as the reported region. # The E-value is the p-value multiplied by the number of motifs in the # input database(s). # adj_p-value: The probability that any tested region would be as enriched for # best matches to this motif as the reported region is. # By default the p-value is calculated by using the one-tailed binomial # test on the number of sequences with a match to the motif # that have their best match in the reported region, corrected for # the number of regions and score thresholds tested. # The test assumes that the probability that the best match in a sequence # falls in the region is the region width divided by the # number of places a motif # can align in the sequence (sequence length minus motif width plus 1). # When CentriMo is run in discriminative mode with a negative # set of sequences, the p-value of a region is calculated # using the Fisher exact test on the # enrichment of best matches in the positive sequences relative # to the negative sequences, corrected # for the number of regions and score thresholds tested. # The test assumes that the probability that the best match (if any) # falls into a given region # is the same for all positive and negative sequences. # log_adj_p-value: Log of adjusted p-value. # bin_location: Location of the center of the most enriched region. # bin_width: The width (in sequence positions) of the most enriched region. # A best match to the motif is counted as being in the region if the # center of the motif falls in the region. # total_width: The window maximal size which can be reached for this motif: # rounded(sequence length - motif length +1)/2 # sites_in_bin: The number of (positive) sequences whose best match to the motif # falls in the reported region. # Note: This number may be less than the number of # (positive) sequences that have a best match in the region. # The reason for this is that a sequence may have many matches that score # equally best. # If n matches have the best score in a sequence, 1/n is added to the # appropriate bin for each match. # total_sites: The number of sequences containing a match to the motif # above the score threshold. # p_success: The probability of falling in the enriched window: # bin width / total width # p-value: The uncorrected p-value before it gets adjusted to the # number of multiple tests to give the adjusted p-value. # mult_tests: This is the number of multiple tests (n) done for this motif. # It was used to correct the original p-value of a region for # multiple tests using the formula: # p' = 1 - (1-p)^n where p is the uncorrected p-value. # The number of multiple tests is the number of regions # considered times the number of score thresholds considered. # It depends on the motif length, sequence length, and the type of # optimizations being done (central enrichment, local enrichment, # score optimization).