Database and Motifs High-scoring Motif Occurences Debugging Information



FIMO - Motif search tool

FIMO version 4.12.0, (Release date: Tue Jun 27 16:22:50 2017 -0700)

For further information on how to interpret these results or to get a copy of the FIMO software please access http://meme.nbcr.net

If you use FIMO in your research, please cite the following paper:
Charles E. Grant, Timothy L. Bailey, and William Stafford Noble, "FIMO: Scanning for occurrences of a given motif", Bioinformatics, 27(7):1017-1018, 2011. [full text]


DATABASE AND MOTIFS

DATABASE /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/PRDM4.IDR0.05.filt.narrowPeak.top3000.summitPlusMinus250bp.MemeChipResultsDefaultMax/PRDM4.IDR0.05.filt.narrowPeak.top3000.summitPlusMinus250bp.fa
Database contains 3000 sequences, 1500000 residues

MOTIFS /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/MotifData/motif_databases/CIS-BP/Homo_sapiens.meme (DNA)

MOTIF WIDTH BEST POSSIBLE MATCH
M0085_1.02 10 TTGCCTGAGG
M0104_1.02 11 ATATTAATTAA
M0105_1.02 9 TTTTAATTG
M0108_1.02 11 GATAATATTGA
M0177_1.02 10 ACCATATGTT
M0178_1.02 10 AACAGCTGTT
M0189_1.02 8 GCACGTGA
M0195_1.02 10 ACCATATGGT
M0196_1.02 10 GGCACGTGTA
M0198_1.02 10 AGCCCGTGCG
M0199_1.02 13 TAACGACACGTGC
M0211_1.02 8 GCACGTGT
M0212_1.02 10 GGCACGTGCC
M0214_1.02 9 AACATATGT
M0216_1.02 10 CGCAGCTGTG
M0217_1.02 10 ACCATATGGT
M0300_1.02 10 AATGACGTCA
M0305_1.02 9 GCCACGTGT
M0307_1.02 8 ATACGTTT
M0395_1.02 8 GTACTAAT
M0396_1.02 10 AACGGTAGCA
M0398_1.02 11 AGGAAGTGCAA
M0404_1.02 10 AAGGGGGGCA
M0405_1.02 10 TGGGCGTGGC
M0408_1.02 10 ATGTGCACAT
M0413_1.02 10 GTTGCGGGAT
M0415_1.02 8 ATAACGGT
M0422_1.02 10 CCGGGGGGTC
M0424_1.02 10 TTTGACAGCT
M0428_1.02 8 AGGAGCAC
M0431_1.02 9 ACGGTAGCA
M0432_1.02 9 CGCGCGCAC
M0433_1.02 10 ATCTAGAACA
M0436_1.02 10 TTGTTTATTG
M0437_1.02 9 TATATATAT
M0442_1.02 9 AATGCAGTG
M0443_1.02 10 TGGGCGTGGC
M0594_1.02 9 ATTTGAATT
M0603_1.02 7 TTAGCGG
M0607_1.02 9 TCGTAAATA
M0608_1.02 10 GGGGGCGTAA
M0609_1.02 10 TCCCGCTGCC
M0610_1.02 9 ATCGCGTTA
M0629_1.02 11 AATGTATCAAT
M0630_1.02 10 AATGTATCAA
M0632_1.02 10 AATGTATCAA
M0633_1.02 10 TAATGTATTA
M0635_1.02 13 AACATGTATAAAA
M0714_1.02 10 AACCGGAAGT
M0718_1.02 10 ATGTAAACAA
M0719_1.02 8 GTAAACAA
M0728_1.02 12 AATAAACAAACA
M0736_1.02 8 GTAAACAA
M0737_1.02 10 TATGTAAACA
M0747_1.02 10 AATGTAAACA
M0756_1.02 9 GTAAACAAA
M0887_1.02 9 CCTAATGAG
M0890_1.02 8 GTAATCAA
M0891_1.02 10 TTAATTGGTT
M0892_1.02 10 CCTAATTACC
M0893_1.02 10 ATTAATTAAT
M0894_1.02 8 TTAATTAG
M0896_1.02 8 TTAATTAG
M0897_1.02 10 TTTTATGGGC
M0898_1.02 8 TTACGTAA
M0900_1.02 8 TTAATTGG
M0901_1.02 8 CTTGTCAA
M0905_1.02 9 TTAATTACC
M0906_1.02 10 AATTAATTAG
M0931_1.02 9 TAATTAATT
M0937_1.02 7 TGATACC
M0942_1.02 8 TTGTAATT
M0943_1.02 8 GCTAATTA
M0949_1.02 7 TTAATGA
M0952_1.02 8 TGATACCC
M0958_1.02 7 CTAATTA
M0961_1.02 9 CTAATTGGT
M0969_1.02 9 CTAATCAGC
M0975_1.02 9 TAATTAATT
M0994_1.02 9 ATGATACCC
M0996_1.02 7 GAAATCA
M0999_1.02 9 ATTAATTAC
M1007_1.02 9 TTTATGACC
M1012_1.02 9 TTAATGACT
M1016_1.02 7 GTGATAC
M1018_1.02 7 TAATTAA
M1025_1.02 8 GCTAATTA
M1027_1.02 9 TTAATTACC
M1030_1.02 9 ACCACTTAA
M1034_1.02 7 GCAATTA
M1039_1.02 9 GCTAATTGG
M1049_1.02 10 ATGATACCCC
M1070_1.02 9 TTAATGACC
M1071_1.02 8 TTAATGAC
M1073_1.02 9 TTAATGACC
M1110_1.02 10 GGGCAATAGA
M1125_1.02 10 GCTAATTGGT
M1157_1.02 10 TTTTATGACC
M1163_1.02 9 ATTAATTAC
M1266_1.02 10 GACCGAAACC
M1281_1.02 9 CTTACGCAA
M1358_1.02 9 TAACCCTAG
M1359_1.02 10 TTTTGCGCCA
M1418_1.02 8 TGGTACCA
M1432_1.02 10 ATTGACCTCT
M1458_1.02 10 ACTGACCTCG
M1507_1.02 10 AATTTTGGCT
M1528_1.02 10 CCATGGCAAC
M1529_1.02 10 CCATAGCAAC
M1545_1.02 9 CGTACGTCA
M1581_1.02 10 TTTGCTGACT
M1582_1.02 11 ATATATAATAA
M1583_1.02 8 TTCATTGA
M1589_1.02 10 GCAGAACAAT
M1592_1.02 8 AAAACAAT
M1594_1.02 10 CATTGTTTTT
M1601_1.02 9 ATTGTTTTC
M1605_1.02 10 ATTCATCTTT
M1628_1.02 11 AGGTGTGAAGA
M1668_1.02 12 TCCAAACGAGAT
M1838_1.02 15 CATTGCCTCAGGGCA
M1841_1.02 15 GAACATTCTGTTCTT
M1863_1.02 8 GTAAACAT
M1868_1.02 14 ACAGATAAGAATCT
M1871_1.02 10 TGGGTGGGGC
M1882_1.02 21 AAAGTGAAAGTGAAAGTAAAA
M1884_1.02 15 AGCTAAAAATAGCAT
M1889_1.02 10 AAGCACATGG
M1890_1.02 18 AGAGTGCTGATTGGTCCA
M1906_1.02 11 GGGGGCGGGGC
M1915_1.02 20 GCAAGGCATTATGGGAAATC
M1917_1.02 11 GGTCACGTGGC
M1919_1.02 12 CAAGATGGCGGC
M1925_1.02 11 TATTGTGCAAT
M1926_1.02 9 CAGGTGAGG
M1927_1.02 8 GCCACGTG
M1928_1.02 11 GGGAATTTCCC
M1929_1.02 15 CATGTCTGGGCATGT
M1934_1.02 20 AGGTCAGGGTGACCTGGGCC
M1950_1.02 6 GTGGAT
M1955_1.02 11 TTTCCAGGAAA
M1963_1.02 14 GGGGCCGAGGCCTG
M1968_1.02 11 TCCCTGGGGAC
M1970_1.02 6 TGCCAA
M2065_1.02 15 AGGTCAGGGTGACCT
M2264_1.02 8 GCCATCTG
M2267_1.02 11 TTTTATGGCTT
M2268_1.02 11 TATTGCACAAT
M2270_1.02 11 TAATTTAATCA
M2273_1.02 11 GGGCGGGAAGG
M2275_1.02 13 GAACCAGGAAGTG
M2277_1.02 11 ACAGGAAGTGG
M2278_1.02 11 TGTGACTCATT
M2281_1.02 11 TCCAATCCACA
M2283_1.02 15 CAAAAGTAAACAAAG
M2286_1.02 15 TGGACTTTGGACTCT
M2287_1.02 13 GGCCATAAATCAC
M2289_1.02 13 AAGATGATGTCAT
M2292_1.02 11 GGTGACTCATC
M2296_1.02 15 CTGAGTCAGCAATTT
M2299_1.02 13 AGGGACAGCTGCA
M2301_1.02 15 AAATGGACCAATCAG
M2303_1.02 15 TGACCTCTGACCCCT
M2305_1.02 11 TGCGCAGGCGC
M2306_1.02 13 TTCATTTGCATAT
M2307_1.02 15 AGAAAGTGAAAGTGA
M2310_1.02 15 CAAACCACAAACCCC
M2313_1.02 10 CCATTGTTTT
M2314_1.02 15 GGGAGGGGGCGGGGC
M2319_1.02 14 TTCCTTTGATCTTT
M2321_1.02 20 AGACATGCCCAGACATGCCC
M2323_1.02 15 CAGATCTCGCGAGAG
M2385_1.02 11 AAGTAAACAAA
M2387_1.02 10 GTGGGGTGAT
M2388_1.02 10 ATGGGGTGAT
M2390_1.02 8 CAGGAAGG
M2391_1.02 10 GGGGCGGGGC
M2392_1.02 19 GTTGCCATGGCAACCGCGG
M4344_1.02 8 GGTTGCTA
M4427_1.02 21 GTGGCCACCAGGGGGCGCTGT
M4428_1.02 14 AGAACATTCTGTTC
M4438_1.02 15 AGGTCATGGTGACCT
M4444_1.02 14 AGGGGATTTCCCAG
M4451_1.02 11 GGTCACGTGAC
M4452_1.02 15 TCTCGATATGACTCA
M4453_1.02 15 AAGAGGAAGTGAAAC
M4454_1.02 15 AAATCTCGCGAGAAC
M4459_1.02 20 GTGCGGGGGCGGGGGGGGGG
M4461_1.02 21 GCCTTCTGGGAATTGTAGTTC
M4462_1.02 11 CGCCGGAAGTG
M4463_1.02 18 AATGTGGAAATGAGTCAG
M4467_1.02 15 ATGCCAAAAATAGCA
M4469_1.02 14 TCCATGGTGCTGAA
M4471_1.02 15 GCAGCCAAGCGTGAC
M4473_1.02 15 GCCGGCCAATCAGAG
M4476_1.02 15 TCACCTGTTGCTAGG
M4477_1.02 19 CTATGGCCATATAAGGCAA
M4478_1.02 20 CAGGTGATTTCCGGGAAATG
M4479_1.02 11 GCAGCAGCTGT
M4481_1.02 15 GGTCACGTGGCCCGG
M4484_1.02 15 CTGGGAATTGTAGTC
M4509_1.02 17 ATTTGCATAACAAAGGA
M4511_1.02 8 TGACCTCT
M4522_1.02 10 CCGGAAGTGG
M4525_1.02 15 AGCCTCAGGGCATGG
M4526_1.02 15 GGGGGGTGACTCATC
M4527_1.02 21 GGACTACAACTCCCAGCAGGC
M4532_1.02 10 CCACGTGCTC
M4536_1.02 15 GGGGAGGGCGCGCGG
M4537_1.02 15 GGCGGGAAATTTGAA
M4543_1.02 11 GGAACCACGTG
M4545_1.02 15 AGAAAGTGAAAGTGA
M4551_1.02 17 TTCATACTGGAGAGAAA
M4553_1.02 10 GGTCACGTGC
M4565_1.02 14 CAGGATGAGTCACC
M4567_1.02 15 GCAAAGTAAACAGAG
M4569_1.02 18 GTCCCGGGTTCGAATCCC
M4572_1.02 15 TGCTGACTCAGCAAA
M4600_1.02 11 GCAGATAAGGA
M4604_1.02 21 GGGGAGGAGGGAGGGGAGGAG
M4612_1.02 15 CCGCCAGGGGGCGCC
M4619_1.02 11 GGGTGACTCAT
M4623_1.02 15 CGGTGACTCATCCTT
M4629_1.02 17 CATGACTCAGCAATTTT
M4635_1.02 15 GAAAATGAAACTGAA
M4636_1.02 21 CTGCCCTCATCCAAGATGGCG
M4640_1.02 15 GGGCAGGGGTCTCGG
M4665_1.02 15 CAGATAAGAATCTGT
M4680_1.02 8 GTCACGTG
M4681_1.02 10 TGCTGAGTCA
M4692_1.02 10 ACTACAACTC
M4698_1.02 15 CTGGACTTTGGACTC
M4702_1.02 8 TGACCTTT
M4708_1.02 10 TATGCAAATA
M4840_1.02 11 AAATGAGCAAC
M4850_1.02 21 TGTTGTGTCCGTGCCATCTGG
M4930_1.02 11 AAATCGTGACT
M4971_1.02 10 GTAACAGCTG
M5116_1.02 9 ACCACCTGT
M5209_1.02 11 GTGGGCGTGGC
M5234_1.02 10 GGTCACGTAC
M5284_1.02 10 GCTAATTAGC
M5287_1.02 13 CTAATTAAATTAA
M5291_1.02 13 TTAATTTAATTAA
M5292_1.02 13 GGATGATGCAATA
M5293_1.02 14 CGATGACGTCATCG
M5294_1.02 10 GTTAAACGGT
M5300_1.02 17 TAATCGGTATTTAATTG
M5302_1.02 14 TGATGACGTCATCA
M5303_1.02 17 TGCTTTCTAGGAATTCA
M5304_1.02 10 ACCATATGGT
M5307_1.02 12 AAACATATGTTT
M5308_1.02 10 ACCATATGTT
M5310_1.02 8 TTAATTGG
M5320_1.02 15 CCCGCATACAACGAA
M5321_1.02 10 AACACGTGTT
M5322_1.02 8 TTTTTATT
M5323_1.02 14 TGATGACGTCATCG
M5325_1.02 14 TGATGACGTGGCAT
M5335_1.02 18 ATCGATAATTTTATCGAT
M5339_1.02 10 GATAATTAGG
M5342_1.02 8 GTAATTGG
M5343_1.02 8 ATAATTAC
M5344_1.02 8 GTAATTGG
M5345_1.02 10 GTTAATCCGC
M5346_1.02 10 GCTAATCCGT
M5348_1.02 13 CTAATCTAATTAA
M5349_1.02 13 CTAATTTAATCAA
M5363_1.02 12 TTTCCCGCCAAA
M5377_1.02 12 AACCCGGAAGTG
M5388_1.02 10 GCTAATTAGC
M5390_1.02 10 GCTAATTGGG
M5394_1.02 10 GTTAATTGGA
M5398_1.02 10 ACCGGAAGTG
M5414_1.02 10 GTTAATTGGT
M5420_1.02 10 ACCGGAAGTA
M5421_1.02 11 AACCGGAAATA
M5422_1.02 10 ACCGGAAGTG
M5425_1.02 15 CCGGAAGCGGAAGTG
M5427_1.02 10 GCTAATTACC
M5428_1.02 10 GCTAATTACC
M5430_1.02 10 AACACCTGTT
M5435_1.02 14 TCGCTGTGTCATTC
M5445_1.02 14 AGTAAATATTTTTT
M5446_1.02 7 GTAAACA
M5460_1.02 7 GTAAACA
M5471_1.02 14 GTAAACATGTTTAC
M5480_1.02 10 GCTAATTAGT
M5481_1.02 10 GCTAATTGGT
M5487_1.02 10 TATGCGGGTA
M5490_1.02 16 GCTTCGTGGGGGGTCT
M5491_1.02 14 CTTCGCGGGGGGTC
M5493_1.02 8 GTACGTAA
M5497_1.02 17 AACCGGTTTAACCGGTT
M5500_1.02 10 GCTAATCCCC
M5501_1.02 10 CCTAATCCGC
M5502_1.02 10 TTTAATTAGG
M5503_1.02 10 TTTAATTAGT
M5504_1.02 12 TGGCACGTGCCG
M5506_1.02 12 TGGCACGTGCCA
M5509_1.02 10 GGCACGTGTC
M5512_1.02 9 GGTGGGCAT
M5517_1.02 10 ACTAGTTAAC
M5518_1.02 11 TTTTAATTGCT
M5519_1.02 11 TTTTAATTGGT
M5520_1.02 11 TGTTAATTGCT
M5530_1.02 12 TATAATCGTTTT
M5541_1.02 10 GTTAATTACT
M5542_1.02 10 GCTAATTAGT
M5543_1.02 10 TTTAATTAGT
M5544_1.02 10 TTTTTATGGG
M5547_1.02 11 GGTCGTAAAAT
M5551_1.02 9 TTTTATTAC
M5553_1.02 10 CCAATAAAAA
M5555_1.02 10 GTCGTAAAAA
M5557_1.02 9 GTAATAAAA
M5563_1.02 10 GCTAATTAGC
M5567_1.02 13 GAACGTTCTAGAA
M5568_1.02 15 TTCGAAACGTTCGAA
M5571_1.02 10 GACAGGTGTA
M5581_1.02 12 CATGTCATGTAA
M5582_1.02 12 CATGTCATGTAA
M5583_1.02 8 TTAAGTGC
M5584_1.02 13 TTAATCTAATTAA
M5587_1.02 9 ATGACTCAT
M5591_1.02 18 CAAAAAGGGGCGTGGCAT
M5592_1.02 14 AAGGGGGCGTGGCC
M5593_1.02 11 GGGGGCGTGGC
M5594_1.02 13 CTCGACCTAATTA
M5602_1.02 8 TTAATTGG
M5604_1.02 8 TTAATTAA
M5605_1.02 8 TTAATTAA
M5616_1.02 12 GCTATAAATAGC
M5621_1.02 8 CCTGTCAA
M5623_1.02 10 GCTAATTAAC
M5624_1.02 10 AGTAATTAAC
M5627_1.02 10 CACAGGTGTT
M5628_1.02 8 AGGTGTGA
M5631_1.02 10 GTTAATTAGA
M5632_1.02 10 ATCACGTGAT
M5634_1.02 10 ACCACGTGCC
M5635_1.02 10 TTTAATTACT
M5636_1.02 10 AACAGCTGTT
M5637_1.02 18 TAATTGGTTTTTAATTGC
M5643_1.02 12 ACCGTTAAACGG
M5652_1.02 10 GCCATATGGT
M5653_1.02 10 GACATATGTT
M5660_1.02 15 TTGGCACGGTGCCAA
M5662_1.02 15 TTGGCACAGTGCCAG
M5664_1.02 15 TTGGCACCGTGCCAA
M5672_1.02 10 GCTAATTAGC
M5689_1.02 11 AATTTGCTGAC
M5690_1.02 10 AACATATGTT
M5691_1.02 10 ACCATATGTT
M5693_1.02 10 ACCATATGTT
M5697_1.02 14 ATTATTGATTTTTT
M5702_1.02 17 TGCAGTCATGCGTGACG
M5704_1.02 10 TAATCGATTA
M5705_1.02 8 CTAATTAG
M5709_1.02 10 TAATCGATTA
M5711_1.02 17 TGCAGTCATGCGTGACG
M5714_1.02 11 TAATTTAATTA
M5715_1.02 11 TAATTTAATTA
M5717_1.02 9 CTTAATCCC
M5720_1.02 9 CTTAATCCC
M5722_1.02 12 TGACACCTGTCA
M5729_1.02 9 ATTTGCATA
M5735_1.02 13 AAATTAGCATAAT
M5738_1.02 9 ATTTGCATA
M5740_1.02 14 ATGAATAATTAATG
M5743_1.02 16 ATGCATAATTAATGAG
M5744_1.02 9 ATTTGCATA
M5746_1.02 10 ATAATGAGCT
M5750_1.02 13 GGGGGCCTTGAAA
M5753_1.02 12 CAAGACGCCTTA
M5771_1.02 10 GTTAATTGGC
M5772_1.02 8 TTAATTGG
M5777_1.02 16 CGTTGCCATGGCAACG
M5782_1.02 9 GGATAATCC
M5804_1.02 15 GAGCAACAGGTGGTT
M5805_1.02 13 ATGCAACAGGTGG
M5807_1.02 8 TTAATTGG
M5815_1.02 12 ACAATAACATTG
M5825_1.02 15 AACACTACCATTGTT
M5835_1.02 16 AACAATGTTCATTGTT
M5838_1.02 16 AACAATGTGCAGTGTT
M5856_1.02 12 AGTGGGCGTGGC
M5857_1.02 11 ACCCGGATGTA
M5865_1.02 14 AAAAAGAGGAAGTA
M5873_1.02 10 AGGTGTGAAA
M5875_1.02 20 AGGTGTGAAAAAAGGTGTGA
M5880_1.02 19 AGGTGTGAAATTCACACCT
M5882_1.02 20 TTTCACACCTAGGTGTGAAA
M5883_1.02 16 TCACACCTTCACACCT
M5889_1.02 16 GGTGTGAATTCACACC
M5896_1.02 8 AGGTGTGA
M5903_1.02 12 AAAGATCAAAGG
M5932_1.02 10 GTCACGTGAT
M5934_1.02 12 TGACAGCTGTCA
M5935_1.02 12 TGACAGCTGTCA
M5941_1.02 13 CTAATTTAATTAG
M5944_1.02 8 CTAATTAC
M5945_1.02 8 CTAATTAC
M5949_1.02 8 CTAATTAT
M5955_1.02 11 TAATGGCGGAC
M5958_1.02 13 TATGTCGCGATAG
M5959_1.02 17 TTTCGCCTGGCACGTCA
M5962_1.02 12 TTCGGTGGTCGC
M5965_1.02 15 GCACAGCGGGGGGTC
M5967_1.02 19 ATGTTAAATGTAGATTAAG
M5970_1.02 17 GTCGTGTTGTGGGAAAG
M5971_1.02 14 TCGAGGCTAGACCA
M5972_1.02 17 GAGTATTATGGGATGGA
M5973_1.02 18 AGGTGTTCTGTTAACACT
M5974_1.02 12 GGGTTCGAGGGT
M5976_1.02 17 TTCGTGGCATTTTTCTA
M5977_1.02 10 GTGGGGGGGG
M5979_1.02 12 TGTGGGAAAAGC
M5980_1.02 10 AGGTAGGTAC
M5981_1.02 15 TTTTCAGTGTGTGCA
M5998_1.02 12 GGTGACGTCATT
M6037_1.02 12 TTTGTCATGTAG
M6111_1.02 13 AGAAAGGGTTAAT
M6114_1.02 10 AAAGCAAACA
M6115_1.02 15 CATGTCTGGGCATGT
M6119_1.02 15 AAAAAGAGGAAGTGG
M6123_1.02 15 GGGGTGGGGGAGGGG
M6131_1.02 21 CCGGTTCAAACCGGTTCTGGC
M6139_1.02 9 GCACGCAAC
M6140_1.02 18 ATTGGTTTTATTGGTTAA
M6141_1.02 12 TAATTCAATTAT
M6144_1.02 10 GCCCCCGGGC
M6146_1.02 14 ACGCGCCTCGGGCG
M6147_1.02 22 TTTAATTTGATTTCGATTAATT
M6149_1.02 13 TGTTAGTATTGTG
M6150_1.02 12 GCCTCCCACGCC
M6151_1.02 8 TCACGTGC
M6152_1.02 10 GTGACGTCAC
M6154_1.02 12 TAAGGAAGAAGG
M6155_1.02 12 GTGGTGACGTGG
M6157_1.02 10 TCATTAATTG
M6159_1.02 16 TTCCTAGAAAGCTTTT
M6161_1.02 20 ACCGGGTCACGTGCAGAAGG
M6162_1.02 14 GGGTCACGTGTCCA
M6163_1.02 12 TTTGTTGTTTTC
M6164_1.02 25 ACATAGTGACACCTAGGTGTGAAAT
M6166_1.02 15 ATTATGTTAAATCAC
M6167_1.02 8 ACATAAAT
M6171_1.02 11 AATTGTGCAAT
M6172_1.02 12 AAGATTGCGCAA
M6173_1.02 13 CAGATTGCAAAAT
M6174_1.02 11 AGCCAATCAGC
M6176_1.02 12 TGACCTTTGACC
M6180_1.02 9 GTGACGTCA
M6181_1.02 11 CACTGACGTCA
M6182_1.02 8 CTAATCCC
M6184_1.02 14 AGGGGGATCGATGG
M6185_1.02 7 CGTTGGC
M6186_1.02 11 TGTTACATAAC
M6187_1.02 13 GGGGATTGCATTT
M6188_1.02 8 ATAATTAT
M6189_1.02 10 GATAATTACA
M6191_1.02 10 GGCGCGAAAC
M6192_1.02 10 CGCGCGAAAC
M6194_1.02 10 CGCGCCAAAC
M6196_1.02 13 TAAGGCGCGAAAA
M6197_1.02 9 CGTGACGTC
M6199_1.02 11 GGCGTGGGCGG
M6200_1.02 11 AGAGTGGGTGT
M6201_1.02 11 GGCGGCAGGGC
M6204_1.02 15 TAGCAGGAAGTGAGT
M6205_1.02 14 GGCAAACAGGAAAT
M6206_1.02 11 ATAAGGAAGTA
M6207_1.02 9 ACCGGAAGT
M6208_1.02 12 CCCAGGAAGTGC
M6210_1.02 13 TGCCCACGTGGTG
M6211_1.02 14 CGGGGATACGAAAT
M6212_1.02 13 CCCACGTACGCAC
M6213_1.02 11 ACCGGAAATCC
M6215_1.02 9 TGACCTTGA
M6216_1.02 9 TGACCTTGA
M6221_1.02 11 GCGGGAAGTGG
M6222_1.02 8 CAGGAAGT
M6223_1.02 13 GACAGGAAGTAAC
M6224_1.02 17 GCCACAGGAAGTAACAC
M6225_1.02 16 AAGATAAGATAAGATA
M6226_1.02 10 CAGGAAATAA
M6228_1.02 10 CTGACTCATC
M6234_1.02 13 GCAAAGCAAACAA
M6235_1.02 15 CTTAAGTAAACAATG
M6236_1.02 15 TCTGGCAAAACAAAC
M6237_1.02 9 AAACAAACA
M6238_1.02 11 AAAATAAACAT
M6239_1.02 11 AAAAGTAAACA
M6240_1.02 12 AACCAATCAGAG
M6241_1.02 10 TAAATAAACA
M6242_1.02 13 TAAACAAAAACAA
M6244_1.02 13 AAAAACAAACAAC
M6245_1.02 16 AAAAAGTAAACAAACC
M6246_1.02 13 AGGTAAACAAACA
M6247_1.02 9 AATAAACAA
M6249_1.02 9 AAACAAATT
M6250_1.02 12 AAATAAACAATT
M6251_1.02 12 TTGTGTTTTTTT
M6256_1.02 9 ACAGATAAC
M6257_1.02 17 TAAGAGATAACTTAGAT
M6258_1.02 7 AAGATAA
M6259_1.02 14 CACATGCGGGTATT
M6262_1.02 11 TGCAGTGATTT
M6263_1.02 10 GCTGTGATTT
M6264_1.02 11 CTGGGTGGTCT
M6265_1.02 11 GTGGGTGGTCT
M6266_1.02 11 TTGGGTGGTCC
M6267_1.02 10 GTGGGGGGTA
M6268_1.02 12 AATGCCAGACGC
M6269_1.02 9 ATTCATTGA
M6270_1.02 20 AGGGACGCAGCTGCTCCCCA
M6271_1.02 13 GGGCTCGTGGCGG
M6272_1.02 16 AGGCCACGTGCCGGAT
M6273_1.02 17 GGGGGCACGTGGCATTA
M6274_1.02 9 GGGTTGCCC
M6275_1.02 12 GCGTACGTGCGG
M6276_1.02 16 GCGCTAGCGGACGTTA
M6277_1.02 13 CTGTTACATAATC
M6278_1.02 12 TAGGGCTGCAAA
M6279_1.02 7 AAAATAC
M6280_1.02 15 AATAATCGCGAATAT
M6281_1.02 15 GGTTAATTATTAACC
M6282_1.02 14 GTTAATCATTAACC
M6285_1.02 14 TTTATTGATTTTTT
M6287_1.02 14 AGAATGTTCTAGAA
M6289_1.02 12 TCATAAATTATC
M6290_1.02 11 CCAATAAAACC
M6291_1.02 10 CATCCATCAA
M6292_1.02 10 CATTAATCAA
M6293_1.02 15 TCCAATCTATTGATT
M6295_1.02 10 CCATCCATCA
M6296_1.02 13 TGCATCAATCATT
M6297_1.02 10 CATTAATCAA
M6298_1.02 11 GCATTAATCAA
M6299_1.02 15 AAAGTAATAAATCAT
M6300_1.02 14 GGGCATCAATCAAA
M6301_1.02 10 AATTAAAGCA
M6302_1.02 11 TCCCTAATAAA
M6303_1.02 8 TTAATTGA
M6304_1.02 10 TAATTAAATT
M6306_1.02 12 TGTCAGGGGGCA
M6308_1.02 14 GGAAAGTGAAAGCA
M6309_1.02 17 GGAAAGCGAAACTGAAA
M6311_1.02 20 TAAAGGAAAGCCAAAAGTGA
M6312_1.02 10 GAAAGTGAAA
M6313_1.02 15 GAGAAAGTGAAACTG
M6314_1.02 12 GAAAGCGAAACT
M6315_1.02 7 GTTAATG
M6316_1.02 9 CCAGGTGCA
M6321_1.02 17 GGCGGGGAGGTGGGGGC
M6322_1.02 11 CAGGGTGTGGC
M6323_1.02 15 TGCCTGGGTGTGGCT
M6324_1.02 10 TGGGTGGGGC
M6325_1.02 8 GGGGGCGG
M6326_1.02 9 CAGGGGGTG
M6327_1.02 7 CTTTGAT
M6328_1.02 13 CACTTTTAATTAG
M6329_1.02 13 AAAATTAATTAAT
M6330_1.02 21 GTGCTGACCCCGCAGCCTTCG
M6331_1.02 9 TGCTGACGG
M6332_1.02 8 TTGCTGAC
M6333_1.02 7 CATGACT
M6336_1.02 17 GGGGGGGGGAGGGAGGG
M6337_1.02 11 GGGGCCGGAGG
M6338_1.02 17 TACAACAACCTGTTCTT
M6339_1.02 7 CTCCGGG
M6342_1.02 12 GCTAAAAATAGC
M6343_1.02 13 CATAAAACTGTCA
M6344_1.02 13 TGACAGCTGTCAA
M6345_1.02 10 ATCACATGAC
M6346_1.02 19 CCACGGCGGTGTCACATGC
M6347_1.02 7 TAATTGT
M6348_1.02 17 AGTGCCGTGTGCAAAAC
M6349_1.02 10 TCAACCTGCA
M6350_1.02 7 CAGTTGG
M6352_1.02 8 CCACGTGG
M6353_1.02 7 GCAGCTG
M6354_1.02 9 GACAGCTGC
M6355_1.02 13 TGACAGCTGCTGC
M6356_1.02 9 GGTGGGGAA
M6357_1.02 8 TTTAATGG
M6358_1.02 12 CGGCAGATGGCC
M6359_1.02 7 AATGACT
M6360_1.02 12 CATGACTCAGCA
M6361_1.02 13 ATGGAAATTTCCA
M6363_1.02 9 AATTTTCCA
M6364_1.02 9 AGTTTTCCA
M6365_1.02 10 AAATTTTCCT
M6366_1.02 15 CATGGATTTTTCCAC
M6368_1.02 14 ATGCATTACATAAC
M6370_1.02 11 GGAATCTCCCT
M6373_1.02 14 CAGCCAATCAGCGC
M6374_1.02 10 CTCAAGTGCT
M6375_1.02 12 AAACCACTTAAA
M6376_1.02 7 TCAAGTG
M6377_1.02 9 TTCAAGGAC
M6378_1.02 13 AATAAGTATATAA
M6379_1.02 11 AGTTAAGTGGA
M6380_1.02 9 TTAATTGGT
M6381_1.02 10 TCTCCCACGC
M6382_1.02 14 TTTGACCTACTTTT
M6383_1.02 19 CGTTGACCTTTGACCTTTA
M6384_1.02 14 AGGTCATTGACCCT
M6385_1.02 19 CTGAACTTTTTTGACCTCA
M6387_1.02 18 CTGAACTTTCCTGACCCC
M6389_1.02 13 CTGACCTCTGGCC
M6391_1.02 14 TGACTTTTGACTTT
M6392_1.02 18 TCAATTGAACTTTGTCCT
M6393_1.02 9 GTGACCTTT
M6394_1.02 9 GTGACCTTT
M6395_1.02 10 CTGACCTTTG
M6396_1.02 10 TGGCCTTGAA
M6397_1.02 13 TGACCTTGAACTT
M6399_1.02 21 GTCTTGTTATTGATTTTTTTT
M6400_1.02 8 CTAATCCT
M6401_1.02 15 CTTTAATCCCTTAAC
M6402_1.02 9 TGTAACTGT
M6406_1.02 18 GTTCAGTCATGCGTGACA
M6410_1.02 11 TCAAGCGTGAA
M6411_1.02 14 GTCACTGAAGCGGG
M6412_1.02 15 CCCATCAATCAAATT
M6413_1.02 15 CCATCAATCAATTTA
M6415_1.02 9 CTAATTACC
M6416_1.02 11 TCTGTGGTTTG
M6417_1.02 13 ATATATTCATGAG
M6418_1.02 10 TTTAATCCCA
M6419_1.02 13 CATCAATCAAGCT
M6420_1.02 17 GGGGGCATCAGGAGGGG
M6422_1.02 10 CGGGGGGCCC
M6423_1.02 9 ATTTGCATA
M6425_1.02 14 TTTGCATTACAATG
M6426_1.02 10 CATAAATAAT
M6427_1.02 13 CAGCTCATTAATA
M6429_1.02 13 CATAATTTATGCA
M6430_1.02 7 TGACCTT
M6432_1.02 14 TGACCTTTGTCCTA
M6433_1.02 18 GTGACCTTTGACCTACTT
M6436_1.02 13 TACAGACTGTTCT
M6438_1.02 15 GAGTAATTAATATAA
M6439_1.02 7 TAATCTG
M6440_1.02 7 TTAATTG
M6441_1.02 21 GGACAGCTGTTCTGTTTCCTG
M6442_1.02 17 CCCTGCCCCCCCCTTCC
M6443_1.02 7 TGACCTC
M6445_1.02 11 GCCCTGACCTC
M6446_1.02 20 GTGACCTCTGGGTGACCCCC
M6448_1.02 12 GGGGGATTTCCC
M6449_1.02 12 TGGGGATTTCCC
M6451_1.02 12 GTTGCTAGGGAA
M6453_1.02 14 TTACCATGGCAACC
M6454_1.02 12 TGACCTAGTTTT
M6455_1.02 13 CTGACCTACTTTT
M6456_1.02 22 GGGGGGGGGGGTGGTTTGGGGT
M6457_1.02 10 TAACCACAAA
M6459_1.02 14 AACCACAAAACCCA
M6461_1.02 10 TGTGACCTCA
M6462_1.02 13 GTGACCTTTGACC
M6463_1.02 12 AGCCTGTCTGCC
M6464_1.02 11 GTGTCCGTCTG
M6465_1.02 10 GTGTCTGGCC
M6466_1.02 9 TGTCTGGCC
M6468_1.02 8 CCAGGTGG
M6469_1.02 7 TCAGGTG
M6470_1.02 7 TCTTTGT
M6471_1.02 8 CATTGTTC
M6472_1.02 7 CATTGTT
M6473_1.02 18 CAACAATCTTCATTGTCC
M6474_1.02 19 GGAAAAGAACAATGGGTTC
M6475_1.02 16 ATTTGCATAACAATGG
M6476_1.02 12 GAGAACAAAGCG
M6477_1.02 8 TAACAATA
M6478_1.02 11 AGAACAATGGG
M6482_1.02 20 GGGGGGGGGCGGGGCCGGGG
M6483_1.02 24 GGGGCCAGGGGGGGGGCGGGGCCG
M6485_1.02 12 AAAAAGAGGAAG
M6486_1.02 16 CGGCTGTTACCCTGGG
M6490_1.02 9 AAAACAAAA
M6491_1.02 12 TTTCCAGGAATT
M6492_1.02 13 TTTTCTGGGAATT
M6496_1.02 13 TTTCCCAGAAAAG
M6497_1.02 13 TTCCCAGGAATTT
M6498_1.02 9 TGACCTTGA
M6499_1.02 9 CGTGGGAAA
M6500_1.02 12 GACCATCTGTTC
M6503_1.02 25 GTCGCTTTTCACACCTCTGATGGCA
M6504_1.02 24 AGGTAGAGAATTAGGTGATAAAAA
M6505_1.02 8 AGGTGTGA
M6506_1.02 12 GCGCTTTGTTCT
M6507_1.02 14 CACATTCCTGCGCC
M6508_1.02 15 GATATTTCTGCTCTA
M6509_1.02 12 AAAAATAGCTCT
M6510_1.02 14 TGTTTATGTAAATG
M6513_1.02 11 GCCAGCTGCGG
M6514_1.02 16 GCCTGAACTGGCCAGA
M6515_1.02 14 AAATGGCGGGAAAC
M6516_1.02 11 GACCATCTGGT
M6517_1.02 10 GGTCATGTGG
M6518_1.02 9 GGTCACGTG
M6519_1.02 16 CAGGTGACACCTGACA
M6521_1.02 10 CTGACCTGAA
M6523_1.02 17 TGACCTGACCTGACCTC
M6525_1.02 11 CGCCAAGGAGC
M6527_1.02 10 ACCCAGGTGG
M6529_1.02 7 TTTCTGG
M6532_1.02 7 TGACCTC
M6534_1.02 11 TTAGCTAATTA
M6535_1.02 13 GCGGGGGCGGGGG
M6536_1.02 12 GACGTGTCATTA
M6537_1.02 11 GGGGATTGGCC
M6539_1.02 22 CGGAGAGGGGGAGGGGGGGGGC
M6540_1.02 15 CAATAGCGGTGGTGG
M6542_1.02 13 AGATGATAGAGCC
M6544_1.02 12 GGGGATTTCCCA
M6545_1.02 14 GGTAGGGAAACCCC
M6546_1.02 11 ATTAATAATTA
M6547_1.02 19 GAGGGCCCCAGGCCTCGGC
M6548_1.02 9 GGGGTGGTC
M6549_1.02 9 GGGGTGGTC
M6550_1.02 9 TGGGTGGTC
M6552_1.02 15 GGGGTGGGGGAGGGG
M6553_1.02 12 GAGGGGGGCGGA
M6554_1.02 14 TCCAGATGTTTCGG
M6555_1.02 9 CGATAATGA
M6556_1.02 24 GGGCAACAAATCCCTGCGCCCCGT
M6557_1.02 12 GGAAAAAATCGG
M6558_1.02 15 GCACCCTTGGGTGCC
M6559_1.02 16 CCCACGGTTACTGCCG

Random model letter frequencies (/srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/PRDM4.IDR0.05.filt.narrowPeak.top3000.summitPlusMinus250bp.MemeChipResultsDefaultMax/background):
A 0.267 C 0.233 G 0.233 T 0.267


SECTION I: HIGH-SCORING MOTIF OCCURENCES

Motif ID Alt ID Sequence Name Strand Start End p-value q-value Matched Sequence
M6453_1.02 RFX3 chr19 - 3013019 3013032 3.61e-09 0.0101 TTACCATGGCAACC
M6453_1.02 RFX3 chr11 + 62770009 62770022 1.04e-08 0.0101 TTGCCATGGCAACC
M6453_1.02 RFX3 chr11 - 62770007 62770020 1.04e-08 0.0101 TTGCCATGGCAACC
M6453_1.02 RFX3 chr11 + 32317192 32317205 2.81e-08 0.0205 TTACCATGGTAACC
M6453_1.02 RFX3 chr7 - 32905513 32905526 3.58e-08 0.0209 TTGCCATGGCAACA
M6453_1.02 RFX3 chr19 + 3013021 3013034 5.9e-08 0.0281 TTGCCATGGTAACC
M6453_1.02 RFX3 chr14 - 51873335 51873348 6.73e-08 0.0281 TTACCATGGTAACA
M6453_1.02 RFX3 chr10 + 72298197 72298210 1.66e-07 0.0605 CTGCCATGGCAACG
M6453_1.02 RFX3 chr18 + 34710235 34710248 2.31e-07 0.0748 CTACCATGGTAACG
M6453_1.02 RFX3 chr7 - 25385471 25385484 3.03e-07 0.0886 ATGCCATGGCAACA
M6453_1.02 RFX3 chr19 - 18104560 18104573 4.12e-07 0.109 TCGCCATAGCAACC
M6453_1.02 RFX3 chr10 - 74589430 74589443 4.66e-07 0.113 TTTCCATGGCAACT
M6453_1.02 RFX3 chr9 + 85430960 85430973 6.44e-07 0.145 TTGCCATGGAAACC
M6453_1.02 RFX3 chr11 + 43934182 43934195 8.28e-07 0.152 TTGTCATGGCAACC
M6453_1.02 RFX3 chr3 - 44995680 44995693 8.51e-07 0.152 CTGCCATAGCAACC
M6453_1.02 RFX3 chrX + 54358970 54358983 8.51e-07 0.152 GTGCCATAGCAACC
M6453_1.02 RFX3 chr5 - 172765516 172765529 8.86e-07 0.152 TCCCCATGGTAACG
M6453_1.02 RFX3 chr8 + 100952125 100952138 1.84e-06 0.298 CTGCTATGGCAACC
M6453_1.02 RFX3 chrX - 18938902 18938915 2.25e-06 0.324 TTACCATGGCAAAC
M6453_1.02 RFX3 chr10 + 74589432 74589445 2.38e-06 0.324 TTGCCATGGAAACT
M6453_1.02 RFX3 chr1 + 146039502 146039515 2.38e-06 0.324 CTACCATGGAAACA
M6453_1.02 RFX3 chr20 + 20211450 20211463 2.57e-06 0.324 TCTCCATAGTAACC
M6453_1.02 RFX3 chr19 - 38003503 38003516 2.66e-06 0.324 CTTCCATAGCAACG
M6453_1.02 RFX3 chr10 + 103493729 103493742 2.66e-06 0.324 TCACCATAACAACC
M6453_1.02 RFX3 chr15 - 55408530 55408543 2.8e-06 0.326 TAACCATAGCAACT
M6453_1.02 RFX3 chr8 - 115669663 115669676 2.96e-06 0.326 AAACCATAGCAACC
M6453_1.02 RFX3 chr16 - 57245082 57245095 3.07e-06 0.326 TCACCATGGCCACC
M6453_1.02 RFX3 chr10 - 72298195 72298208 3.22e-06 0.326 TTGCCATGGCAGCC
M6453_1.02 RFX3 chr17 + 16204491 16204504 3.24e-06 0.326 TTACTATGACAACC
M6453_1.02 RFX3 chr18 - 44946655 44946668 3.93e-06 0.377 TTACCATGGCAAAA
M6453_1.02 RFX3 chr1 - 84847404 84847417 4.02e-06 0.377 TCACCAGGGCAACG
M6453_1.02 RFX3 chr1 + 226000115 226000128 4.13e-06 0.377 GCACCATGGAAACA
M6453_1.02 RFX3 chr7 + 32905515 32905528 4.42e-06 0.391 ttgccatggcaatg
M6453_1.02 RFX3 chr5 - 96083662 96083675 4.56e-06 0.392 ACACCATGGAAACA
M6453_1.02 RFX3 chr6 - 16245107 16245120 4.76e-06 0.397 TACCCATAGCAACC
M6453_1.02 RFX3 chr4 + 156815852 156815865 5.19e-06 0.408 TTCTCATGGCAACA
M6453_1.02 RFX3 chr1 - 201721183 201721196 5.59e-06 0.408 TTGCCATGCCAACA
M6453_1.02 RFX3 chr19 + 7658557 7658570 5.71e-06 0.408 TCACCAGGGCAACA
M6453_1.02 RFX3 chr6 + 139709065 139709078 5.71e-06 0.408 TTATCATAGTAACG
M6453_1.02 RFX3 chr1 + 10032760 10032773 5.91e-06 0.408 TCGCCGTGGCAACG
M6453_1.02 RFX3 chr2 + 205281069 205281082 5.94e-06 0.408 CACCCATGGCAACA
M6453_1.02 RFX3 chr13 - 27272015 27272028 5.94e-06 0.408 GTTCCATGGCTACC
M6453_1.02 RFX3 chr5 + 151685061 151685074 6e-06 0.408 TTACCGTGGCAACT
M6453_1.02 RFX3 chr5 - 90548326 90548339 6.38e-06 0.423 TCGCCATGGCAGCG
M6453_1.02 RFX3 chr5 - 151685059 151685072 6.63e-06 0.43 TTGCCACGGTAACC
M6453_1.02 RFX3 chr18 - 34710233 34710246 7.1e-06 0.451 TTACCATGGTAGCA
M6453_1.02 RFX3 chr4 - 139243883 139243896 7.68e-06 0.474 CTGCCATGGAAACT
M6453_1.02 RFX3 chr1 + 3560694 3560707 8.08e-06 0.474 TTTCCAGGGCAACC
M6453_1.02 RFX3 chr11 - 32317190 32317203 8.18e-06 0.474 TTACCATGGTAAGA
M6453_1.02 RFX3 chr11 - 92868428 92868441 8.52e-06 0.474 GCACCATAACAACC
M6453_1.02 RFX3 chr17 - 75011331 75011344 8.59e-06 0.474 TCTCTATGGCAACT
M6453_1.02 RFX3 chr7 + 70707866 70707879 8.85e-06 0.474 TTTCCCTAGCAACC
M6453_1.02 RFX3 chr1 - 3560692 3560705 8.89e-06 0.474 TTGCCCTGGAAACC
M6453_1.02 RFX3 chr1 + 118486264 118486277 8.94e-06 0.474 TCTCCATGGCGACC
M6453_1.02 RFX3 chr9 - 121359967 121359980 9.17e-06 0.474 TCACCCTGGAAACC
M6453_1.02 RFX3 chr4 + 141041286 141041299 9.17e-06 0.474 ATACCATGGCAAAG
M6453_1.02 RFX3 chr9 - 123912924 123912937 9.61e-06 0.474 CCTCCATGGAAACC
M6453_1.02 RFX3 chr1 + 25447183 25447196 9.75e-06 0.474 TTCCCATTGCAACC
M6453_1.02 RFX3 chr6 - 163416612 163416625 9.88e-06 0.474 TTATCATGGAAACA
M6453_1.02 RFX3 chr6 + 166403059 166403072 1e-05 0.474 tctccttggcaacc
M6453_1.02 RFX3 chr11 - 72308856 72308869 1.01e-05 0.474 TTTCCCTAGCAACG
M6453_1.02 RFX3 chr11 + 43933901 43933914 1.02e-05 0.474 CTGCCATGGCAGCC
M6453_1.02 RFX3 chr5 + 400087 400100 1.02e-05 0.474 TAACCGTGGCAACG
M6453_1.02 RFX3 chr9 - 85430958 85430971 1.05e-05 0.475 TTTCCATGGCAATG
M6453_1.02 RFX3 chr14 - 103033996 103034009 1.06e-05 0.475 TTGCCATGGCAGCT
M6453_1.02 RFX3 chrX - 154891344 154891357 1.09e-05 0.481 TTGCAATGGCAACT
M6453_1.02 RFX3 chr5 + 90548328 90548341 1.14e-05 0.492 CTGCCATGGCGACA
M6453_1.02 RFX3 chr8 + 27603399 27603412 1.18e-05 0.492 CTGCCATGGCAAAC
M6453_1.02 RFX3 chr14 + 103033998 103034011 1.18e-05 0.492 CTGCCATGGCAAAC
M6453_1.02 RFX3 chr12 + 116091730 116091743 1.18e-05 0.492 tcaccatgactaca
M6453_1.02 RFX3 chr9 - 86732682 86732695 1.2e-05 0.493 ATCCCATGACAACA
M6453_1.02 RFX3 chr14 - 100022821 100022834 1.24e-05 0.504 GCACCATGGCACCG
M6453_1.02 RFX3 chr16 - 324261 324274 1.31e-05 0.512 ATGCCATGGCATCG
M6453_1.02 RFX3 chrX + 18938904 18938917 1.31e-05 0.512 TTGCCATGGTAATA
M6453_1.02 RFX3 chr18 + 44946657 44946670 1.31e-05 0.512 TTGCCATGGTAATA
M6453_1.02 RFX3 chr9 + 13049637 13049650 1.38e-05 0.522 TTTCCATGCCAACA
M6453_1.02 RFX3 chr11 - 20057086 20057099 1.38e-05 0.522 TTTCAATGGCAACA
M6453_1.02 RFX3 chr7 - 74355140 74355153 1.4e-05 0.522 GTGCCATGGTGACC
M6453_1.02 RFX3 chr10 - 14954294 14954307 1.41e-05 0.522 TTACCAGAGCAACA
M6453_1.02 RFX3 chr5 + 93583144 93583157 1.46e-05 0.526 TCTCCATAGAAACG
M6453_1.02 RFX3 chr3 + 8555544 8555557 1.46e-05 0.526 TCACTATGGTTACC
M6453_1.02 RFX3 chr14 + 51873337 51873350 1.52e-05 0.536 TTACCATGGTAATT
M6453_1.02 RFX3 chr10 + 52053662 52053675 1.52e-05 0.536 TCACCCTGGAAACA
M6453_1.02 RFX3 chr8 - 100952123 100952136 1.54e-05 0.537 TTGCCATAGCAGCG
M6453_1.02 RFX3 chr3 - 17554023 17554036 1.59e-05 0.544 GTGCCATAGAAACA
M6453_1.02 RFX3 chr15 + 55408532 55408545 1.6e-05 0.544 TTGCTATGGTTACG
M6453_1.02 RFX3 chr1 - 40258264 40258277 1.64e-05 0.544 TCCCCATGGCCACC
M6453_1.02 RFX3 chr8 + 124998646 124998659 1.65e-05 0.544 GTACCCTGGAAACC
M6453_1.02 RFX3 chr5 + 73751801 73751814 1.66e-05 0.544 TTACCAGGACAACC
M6453_1.02 RFX3 chr5 + 127040968 127040981 1.68e-05 0.546 CTGCCAGGGCAACA
M6453_1.02 RFX3 chr20 + 44728850 44728863 1.74e-05 0.557 tccccaaggcaacc
M6453_1.02 RFX3 chr1 - 201721416 201721429 1.77e-05 0.561 TAACCATGAAAACC
M6453_1.02 RFX3 chr13 - 98509562 98509575 1.8e-05 0.565 ATGCCAAGGCAACA
M6453_1.02 RFX3 chr10 + 14648514 14648527 1.85e-05 0.576 ACGTCATGGTAACA
M6453_1.02 RFX3 chr5 - 107534157 107534170 1.95e-05 0.599 TTATCATAACAACC
M6453_1.02 RFX3 chr13 - 33214938 33214951 2.05e-05 0.624 TTTCCCTGGAAACC
M6453_1.02 RFX3 chr10 - 110916607 110916620 2.08e-05 0.628 ATACCAAGGCAACT
M6453_1.02 RFX3 chr1 - 64513625 64513638 2.33e-05 0.691 TTTTCATGGCTACC
M6453_1.02 RFX3 chrX + 74133661 74133674 2.36e-05 0.691 ctttcatggtaaca
M6453_1.02 RFX3 chr5 - 136420855 136420868 2.38e-05 0.691 TCTCCATTGTAACC
M6453_1.02 RFX3 chr17 + 3890165 3890178 2.4e-05 0.691 TGGCCCTGGCAACG
M6453_1.02 RFX3 chr12 - 806642 806655 2.41e-05 0.691 TTTCCATGGTCACA
M6453_1.02 RFX3 chr10 - 59606749 59606762 2.5e-05 0.706 TAACTATAGTAACA
M6453_1.02 RFX3 chr1 + 107767210 107767223 2.53e-05 0.706 TTACCAGAGCAACT
M6453_1.02 RFX3 chr19 - 58381152 58381165 2.54e-05 0.706 TTTCTATGATAACC
M6453_1.02 RFX3 chr10 - 102767039 102767052 2.65e-05 0.73 CTACCCTGGAAACA
M6453_1.02 RFX3 chr3 + 160698283 160698296 2.68e-05 0.731 tcactatgggaaca
M6453_1.02 RFX3 chr12 - 89352567 89352580 2.78e-05 0.752 TCCCCACGGCAACA
M6453_1.02 RFX3 chr8 + 37547947 37547960 2.87e-05 0.77 ACGCCACGGCAACA
M6453_1.02 RFX3 chr11 - 43934180 43934193 2.9e-05 0.771 TTGCCATGACAATC
M6453_1.02 RFX3 chr10 - 36423823 36423836 2.98e-05 0.771 TGGCCATGATAACC
M6453_1.02 RFX3 chr13 + 48727398 48727411 3.01e-05 0.771 ATGTCATGGAAACC
M6453_1.02 RFX3 chr1 + 212118735 212118748 3.02e-05 0.771 GCACCCTGGAAACG
M6453_1.02 RFX3 chr3 - 149619084 149619097 3.02e-05 0.771 GTGCCATGAAAACA
M6453_1.02 RFX3 chr18 + 33826380 33826393 3.03e-05 0.771 CAGTCATGGTAACG
M6453_1.02 RFX3 chr17 - 38416051 38416064 3.06e-05 0.771 ATACCCTGGCTACA
M6453_1.02 RFX3 chr11 - 95521394 95521407 3.13e-05 0.776 CCACCATGGCATCT
M6453_1.02 RFX3 chr1 - 54488551 54488564 3.15e-05 0.776 ATACTATGGTTACG
M6453_1.02 RFX3 chr16 - 50613584 50613597 3.16e-05 0.776 CTGCCAAGGTAACA
M6453_1.02 RFX3 chr8 - 108441289 108441302 3.2e-05 0.78 TCCCCATGGCAATA
M6453_1.02 RFX3 chr1 - 43666995 43667008 3.27e-05 0.788 CCGGCATGGTAACC
M6453_1.02 RFX3 chr2 + 20051513 20051526 3.32e-05 0.795 ACACCATCGTAACA
M6453_1.02 RFX3 chr1 - 64744535 64744548 3.46e-05 0.809 TCCCGATGGTAACC
M6453_1.02 RFX3 chr19 - 54133674 54133687 3.48e-05 0.809 TTGTCCTGGTAACA
M6453_1.02 RFX3 chr9 - 34479394 34479407 3.49e-05 0.809 CAACCATGGCAAAG
M6453_1.02 RFX3 chr17 - 71181267 71181280 3.49e-05 0.809 TTGGCCTGGCAACC
M6453_1.02 RFX3 chr19 + 58381154 58381167 3.61e-05 0.828 TTATCATAGAAACA
M6453_1.02 RFX3 chr19 - 4088061 4088074 3.63e-05 0.828 TTGCCCTGGCCACG
M6453_1.02 RFX3 chr6 - 144287480 144287493 3.67e-05 0.828 TTACTATAGGAACC
M6453_1.02 RFX3 chr2 - 160472807 160472820 3.68e-05 0.828 CCCCCATGGAAACT
M6453_1.02 RFX3 chr1 - 118486262 118486275 3.74e-05 0.832 TCGCCATGGAGACG
M6453_1.02 RFX3 chr21 + 38985196 38985209 3.85e-05 0.832 CTTCCCTGGTAACT
M6453_1.02 RFX3 chr6 - 132964611 132964624 3.87e-05 0.832 GTCCCATGGCAAGG
M6453_1.02 RFX3 chr10 - 7302533 7302546 3.9e-05 0.832 TAGTCATGGAAACC
M6453_1.02 RFX3 chr1 + 87718711 87718724 3.93e-05 0.832 TCCTTATGGCAACC
M6453_1.02 RFX3 chr15 + 47795097 47795110 3.95e-05 0.832 CGATCATGGCAACC
M6453_1.02 RFX3 chr10 - 14648397 14648410 3.97e-05 0.832 GTTCCCTAGCAACA
M6453_1.02 RFX3 chr8 + 101765755 101765768 3.99e-05 0.832 GTGCCCTGGAAACA
M6453_1.02 RFX3 chr11 + 27394980 27394993 4.02e-05 0.832 ATGCCATAGCATCC
M6453_1.02 RFX3 chr17 + 71600372 71600385 4.02e-05 0.832 GTAACATAGCAACA
M6453_1.02 RFX3 chr2 - 169479478 169479491 4.06e-05 0.832 GCTCCAAGGCAACG
M6453_1.02 RFX3 chrX - 54358968 54358981 4.07e-05 0.832 TTGCTATGGCACCA
M6453_1.02 RFX3 chr19 - 48551682 48551695 4.12e-05 0.832 GCACCCTGGAAACA
M6453_1.02 RFX3 chr16 + 19102560 19102573 4.14e-05 0.832 TCACCATGACATCA
M6453_1.02 RFX3 chr12 + 95103450 95103463 4.18e-05 0.832 ACATTATGGCAACA
M6453_1.02 RFX3 chr22 + 30196814 30196827 4.19e-05 0.832 ATCCCATAACAACA
M6453_1.02 RFX3 chr6 - 123841515 123841528 4.21e-05 0.832 TTACCATCACAACT
M6453_1.02 RFX3 chr20 - 20211783 20211796 4.24e-05 0.832 CTACCATAAAAACC
M6453_1.02 RFX3 chr6 + 31702311 31702324 4.24e-05 0.832 TGACCATGGGAACA
M6453_1.02 RFX3 chr15 - 22631920 22631933 4.27e-05 0.833 TTGCCATTGAAACA
M6453_1.02 RFX3 chr13 + 98509436 98509449 4.37e-05 0.84 ctaccatgagaaca
M6453_1.02 RFX3 chr14 + 24036600 24036613 4.43e-05 0.84 TGGCCCTGGTAACG
M6453_1.02 RFX3 chr1 - 146039500 146039513 4.48e-05 0.84 TTTCCATGGTAGCT
M6453_1.02 RFX3 chr2 + 8805392 8805405 4.49e-05 0.84 tgtccctggcaacc
M6453_1.02 RFX3 chr19 + 42032844 42032857 4.49e-05 0.84 aaaccaaggcaaca
M6453_1.02 RFX3 chr1 + 116737513 116737526 4.56e-05 0.84 CTACCCTGGAAACT
M6453_1.02 RFX3 chr16 + 14013947 14013960 4.58e-05 0.84 tcactattgtaacc
M6453_1.02 RFX3 chr16 + 15660957 15660970 4.58e-05 0.84 cttccatggtcacg
M6453_1.02 RFX3 chr16 + 80265777 80265790 4.62e-05 0.84 ACTTCATAGCAACC
M6453_1.02 RFX3 chr10 - 118922449 118922462 4.62e-05 0.84 GTCCCAAGGCAACA
M6453_1.02 RFX3 chr19 + 35249832 35249845 4.64e-05 0.84 CCTCCATGGCAAAG
M6453_1.02 RFX3 chr18 - 363418 363431 4.69e-05 0.84 TCTTTATGGCAACA
M6453_1.02 RFX3 chr18 + 387094 387107 4.69e-05 0.84 TCTTTATGGCAACA
M6453_1.02 RFX3 chr13 - 24864450 24864463 4.74e-05 0.843 GAATCATGGTAACT
M6453_1.02 RFX3 chr1 - 175841986 175841999 4.77e-05 0.843 CCTCCATGGTGACC
M6453_1.02 RFX3 chr14 + 69999439 69999452 4.8e-05 0.843 ACCCCATGGCCACC
M6453_1.02 RFX3 chr17 + 75011160 75011173 4.85e-05 0.843 GGGCCATGGAAACC
M6453_1.02 RFX3 chr5 - 36502860 36502873 4.86e-05 0.843 TCCCCATGGCAGCT
M6453_1.02 RFX3 chr6 - 152272263 152272276 4.88e-05 0.843 TTACCATAATTACA
M6453_1.02 RFX3 chr1 - 61091610 61091623 4.9e-05 0.843 ATACCATAGTATCC
M6453_1.02 RFX3 chr1 - 1512058 1512071 4.93e-05 0.843 ACGCCATAGCGACG
M6453_1.02 RFX3 chr10 + 59606751 59606764 4.97e-05 0.843 TTACTATAGTTACA
M6453_1.02 RFX3 chr22 + 41673037 41673050 4.99e-05 0.843 TCACTATGGTACCC
M6453_1.02 RFX3 chr11 + 15370967 15370980 5.05e-05 0.848 GTTTTATGGCAACC
M6453_1.02 RFX3 chr16 - 51577563 51577576 5.09e-05 0.85 CACCCATGATAACC
M6453_1.02 RFX3 chr16 + 4882111 4882124 5.17e-05 0.858 CAGCCATGGCAAGG
M6453_1.02 RFX3 chr1 + 68217479 68217492 5.21e-05 0.86 TCGCCATGGAAAAC
M6453_1.02 RFX3 chr7 + 83267189 83267202 5.32e-05 0.86 CTCCTATGGAAACC
M6453_1.02 RFX3 chr19 - 10416249 10416262 5.34e-05 0.86 TTACCTTGGCACCC
M6453_1.02 RFX3 chr9 + 23727767 23727780 5.34e-05 0.86 TCACCATGGAAATA
M6453_1.02 RFX3 chr14 - 90341445 90341458 5.39e-05 0.86 TTTCCATGACACCC
M6453_1.02 RFX3 chr14 - 96575183 96575196 5.39e-05 0.86 ATACTAAGGCAACG
M6453_1.02 RFX3 chr1 - 228903066 228903079 5.39e-05 0.86 CTGCCATGACTACT
M6453_1.02 RFX3 chr7 - 105257312 105257325 5.41e-05 0.86 TAACAATAGCAACA
M6453_1.02 RFX3 chr22 - 50602040 50602053 5.47e-05 0.864 ATACCAAGGAAACC
M6453_1.02 RFX3 chr13 - 49125016 49125029 5.59e-05 0.874 TTACCATAACAGCC
M6453_1.02 RFX3 chr16 - 22232799 22232812 5.65e-05 0.874 CACCCCTGGCAACA
M6453_1.02 RFX3 chr11 - 95521172 95521185 5.67e-05 0.874 CCTGCATGGCAACA
M6453_1.02 RFX3 chr3 + 191302643 191302656 5.67e-05 0.874 CTACTATAACAACA
M6453_1.02 RFX3 chr19 - 955115 955128 5.7e-05 0.874 ACCCCATGGCAAAC
M6453_1.02 RFX3 chr2 - 61762608 61762621 5.73e-05 0.874 ATGTCATGGTTACC
M6453_1.02 RFX3 chr16 - 54067529 54067542 5.75e-05 0.874 CTGCAATAGCAACA
M6453_1.02 RFX3 chr5 + 81751177 81751190 5.8e-05 0.874 TCGCCCAGGCAACG
M6453_1.02 RFX3 chr4 - 8044937 8044950 5.83e-05 0.874 TTCCCCTGGGAACC
M6453_1.02 RFX3 chrX - 23793343 23793356 5.83e-05 0.874 TTCCCCTGGGAACC
M6453_1.02 RFX3 chr10 + 72204303 72204316 5.98e-05 0.881 GACTcatggcaaca
M6453_1.02 RFX3 chr22 + 50602214 50602227 6.03e-05 0.881 CTGCCATCACAACC
M6453_1.02 RFX3 chr9 - 77012107 77012120 6.07e-05 0.881 GCACTTTGGCAACG
M6453_1.02 RFX3 chr6 + 85644346 85644359 6.07e-05 0.881 AAACCTTGGCAACT
M6453_1.02 RFX3 chr7 + 116342515 116342528 6.1e-05 0.881 acaccatagttact
M6453_1.02 RFX3 chr1 + 3560703 3560716 6.15e-05 0.881 CAACCCTGGAAACC
M6453_1.02 RFX3 chr1 + 46643335 46643348 6.21e-05 0.881 GTACCATCACAACA
M6453_1.02 RFX3 chr5 - 407989 408002 6.24e-05 0.881 CTCCCATGGTATCG
M6453_1.02 RFX3 chr22 + 38241106 38241119 6.26e-05 0.881 gagccagggcaaca
M6453_1.02 RFX3 chr1 + 54488553 54488566 6.28e-05 0.881 TAACCATAGTATCC
M6453_1.02 RFX3 chr8 - 124998543 124998556 6.28e-05 0.881 TAACCAGAGTAACC
M6453_1.02 RFX3 chrX + 149146116 149146129 6.28e-05 0.881 CTGCCATAGCAAAA
M6453_1.02 RFX3 chr5 - 400085 400098 6.3e-05 0.881 TTGCCACGGTTACG
M6453_1.02 RFX3 chr2 - 218284770 218284783 6.3e-05 0.881 TTTTTATAGCAACC
M6453_1.02 RFX3 chr14 - 24036598 24036611 6.35e-05 0.884 TTACCAGGGCCACC
M6453_1.02 RFX3 chr10 + 15431340 15431353 6.42e-05 0.886 acaccatgattaca
M6453_1.02 RFX3 chr17 - 47721705 47721718 6.44e-05 0.886 TTTCCTTGACAACA
M6453_1.02 RFX3 chr10 - 12980009 12980022 6.55e-05 0.886 TACCCATAGCTACA
M6453_1.02 RFX3 chr2 - 143261057 143261070 6.55e-05 0.886 TGACCATAGCTACA
M6453_1.02 RFX3 chr1 - 65527306 65527319 6.6e-05 0.886 ATTCCAAGGCAACT
M6453_1.02 RFX3 chr18 - 22179504 22179517 6.62e-05 0.886 TTGCCATTATAACA
M6453_1.02 RFX3 chr22 - 46114329 46114342 6.74e-05 0.886 GTGCCCTGGAAACT
M6453_1.02 RFX3 chr5 - 149795567 149795580 6.74e-05 0.886 GTGCCCTGGAAACT
M6453_1.02 RFX3 chr19 - 7658555 7658568 6.77e-05 0.886 TTGCCCTGGTGACA
M6453_1.02 RFX3 chr8 + 108441258 108441271 6.8e-05 0.886 aaaccatggtaaag
M6453_1.02 RFX3 chr14 + 99478242 99478255 6.82e-05 0.886 ATGCCATAGCAATA
M6453_1.02 RFX3 chr7 - 44123959 44123972 6.85e-05 0.886 TCGCCATCGCTACA
M6453_1.02 RFX3 chr7 + 70708227 70708240 6.85e-05 0.886 TTTCCATAGTAAAG
M6453_1.02 RFX3 chr5 - 36300961 36300974 6.87e-05 0.886 CTACCATAGTACCA
M6453_1.02 RFX3 chr6 + 36088243 36088256 6.93e-05 0.886 aagcaatggcaaca
M6453_1.02 RFX3 chr18 - 31197866 31197879 6.99e-05 0.886 CCACCCTGGAAACT
M6453_1.02 RFX3 chr1 - 10032758 10032771 7.06e-05 0.886 TTGCCACGGCGACC
M6453_1.02 RFX3 chr11 + 96150782 96150795 7.06e-05 0.886 CCACCATACTAACC
M6453_1.02 RFX3 chr10 + 75613681 75613694 7.1e-05 0.886 TCTCCAGAGCAACA
M6453_1.02 RFX3 chr8 - 80093282 80093295 7.1e-05 0.886 TCACCATAGAGACC
M6453_1.02 RFX3 chr17 - 80193193 80193206 7.1e-05 0.886 TTCCCCTGGAAACT
M6453_1.02 RFX3 chr10 - 133520716 133520729 7.1e-05 0.886 TTCCCCTGGAAACT
M6453_1.02 RFX3 chr8 + 124077699 124077712 7.15e-05 0.886 TGGCCATGGCAAAC
M6453_1.02 RFX3 chr6 + 42046240 42046253 7.18e-05 0.886 AATCCATGGAAACT
M6453_1.02 RFX3 chr14 + 90341447 90341460 7.23e-05 0.886 gtgtcatggaaact
M6453_1.02 RFX3 chr5 - 122355653 122355666 7.23e-05 0.886 ATTCCATGGTATCA
M6453_1.02 RFX3 chr10 + 74048072 74048085 7.25e-05 0.886 TTGCCATCGAAACT
M6453_1.02 RFX3 chr10 - 88850632 88850645 7.25e-05 0.886 CTACTCTGGTAACT
M6453_1.02 RFX3 chr6 - 144109680 144109693 7.4e-05 0.886 GCACCATGGACACC
M6453_1.02 RFX3 chr10 + 34320444 34320457 7.45e-05 0.886 CTTCCACAGCAACC
M6453_1.02 RFX3 chr3 - 62103569 62103582 7.49e-05 0.886 TCTTCATGGGAACC
M6453_1.02 RFX3 chr11 - 116854021 116854034 7.54e-05 0.886 TGTCCATGGTTACC
M6453_1.02 RFX3 chr10 - 71232842 71232855 7.59e-05 0.886 ACACCCTGGAAACT
M6453_1.02 RFX3 chr15 - 71279377 71279390 7.59e-05 0.886 CAAACATGGCAACT
M6453_1.02 RFX3 chr10 + 121831727 121831740 7.63e-05 0.886 cccacatggcaaca
M6453_1.02 RFX3 chr17 - 71163608 71163621 7.69e-05 0.886 TTTCCACAGCAACT
M6453_1.02 RFX3 chr18 + 34117198 34117211 7.77e-05 0.886 ttaccatgatcact
M6453_1.02 RFX3 chr19 - 40433757 40433770 7.86e-05 0.886 CCACCCTGGTTACA
M6453_1.02 RFX3 chr18 + 31646308 31646321 7.89e-05 0.886 ATACCATTGAAACA
M6453_1.02 RFX3 chr4 - 119739923 119739936 7.95e-05 0.886 TTCCTAGGGCAACG
M6453_1.02 RFX3 chr13 + 98509564 98509577 7.97e-05 0.886 ttgccttggcatcc
M6453_1.02 RFX3 chr3 - 190973030 190973043 8.02e-05 0.886 TTTCCATGATTACT
M6453_1.02 RFX3 chr22 - 30196458 30196471 8.05e-05 0.886 TGGCCATGGCAATG
M6453_1.02 RFX3 chr6 + 1850951 1850964 8.09e-05 0.886 CCACCATGCAAACC
M6453_1.02 RFX3 chr7 + 27606227 27606240 8.09e-05 0.886 ATTCCATGGTAAGA
M6453_1.02 RFX3 chr1 - 167464093 167464106 8.09e-05 0.886 ATTCCATGGTAAAA
M6453_1.02 RFX3 chr8 - 37637889 37637902 8.14e-05 0.886 ATATCTTGGCAACA
M6453_1.02 RFX3 chr10 + 50610578 50610591 8.19e-05 0.886 CCCCTATGGAAACC
M6453_1.02 RFX3 chr6 - 82877448 82877461 8.19e-05 0.886 TTACCTTGGCACCA
M6453_1.02 RFX3 chr11 - 27394978 27394991 8.21e-05 0.886 ATGCTATGGCATCG
M6453_1.02 RFX3 chr8 + 30601011 30601024 8.24e-05 0.886 CTTCCCTGGAAACA
M6453_1.02 RFX3 chr6 + 8435156 8435169 8.26e-05 0.886 CCTCCCTGGAAACC
M6453_1.02 RFX3 chr13 - 48727396 48727409 8.26e-05 0.886 TTTCCATGACATCA
M6453_1.02 RFX3 chr14 - 68140414 68140427 8.26e-05 0.886 TTTCCATGACATCA
M6453_1.02 RFX3 chr17 - 75011236 75011249 8.26e-05 0.886 TTTCCATGACATCA
M6453_1.02 RFX3 chr17 + 58391504 58391517 8.29e-05 0.886 GTACCATGGCTCCA
M6453_1.02 RFX3 chr7 + 122883408 122883421 8.42e-05 0.886 TTTCAATGACAACA
M6453_1.02 RFX3 chr7 - 135260713 135260726 8.45e-05 0.886 CTGCTATAACAACA
M6453_1.02 RFX3 chr1 - 91851386 91851399 8.5e-05 0.886 CATCCATGGCAGCC
M6453_1.02 RFX3 chr10 - 110615358 110615371 8.58e-05 0.886 GCACCCTAGAAACC
M6453_1.02 RFX3 chr12 - 42504430 42504443 8.6e-05 0.886 GTTCCAGAGCAACG
M6453_1.02 RFX3 chr9 - 125884328 125884341 8.63e-05 0.886 GAGTTATGGCAACC
M6453_1.02 RFX3 chr20 + 38646412 38646425 8.67e-05 0.886 TTCCCCTAGAAACC
M6453_1.02 RFX3 chr6 + 93344605 93344618 8.71e-05 0.886 TGACCATGGTAAAC
M6453_1.02 RFX3 chr1 + 148265085 148265098 8.71e-05 0.886 TTACCATGCCAATG
M6453_1.02 RFX3 chr4 + 182494301 182494314 8.71e-05 0.886 tacccatggtaaac
M6453_1.02 RFX3 chr9 - 13049262 13049275 8.88e-05 0.886 TAATGATGGCAACC
M6453_1.02 RFX3 chr6 + 37191891 37191904 8.88e-05 0.886 taaccatgaccaca
M6453_1.02 RFX3 chr2 - 37377147 37377160 8.88e-05 0.886 TTACCTTTGTAACC
M6453_1.02 RFX3 chr5 - 94440268 94440281 8.91e-05 0.886 TTCCCCAGGCAACC
M6453_1.02 RFX3 chr19 + 38744771 38744784 8.93e-05 0.886 ttaccatgttgacc
M6453_1.02 RFX3 chr6 - 43322368 43322381 8.93e-05 0.886 TTACCATGTTGACC
M6453_1.02 RFX3 chr11 - 43933867 43933880 8.96e-05 0.886 GCACCCTGGCACCC
M6453_1.02 RFX3 chr16 - 18804909 18804922 8.99e-05 0.886 TTAACATGGCAAAG
M6453_1.02 RFX3 chr16 - 68915467 68915480 8.99e-05 0.886 CTAGCCTGGCAACA
M6453_1.02 RFX3 chr2 - 205188666 205188679 8.99e-05 0.886 TCACCTAGGCAACG
M6453_1.02 RFX3 chr20 + 25252919 25252932 9.08e-05 0.886 ttcccctggcagcc
M6453_1.02 RFX3 chr7 + 40986434 40986447 9.08e-05 0.886 TCACCATGGTTTCA
M6453_1.02 RFX3 chr1 + 109484285 109484298 9.11e-05 0.886 CCACCCTGCCAACC
M6453_1.02 RFX3 chr1_KI270713v1_random - 21990 22003 9.13e-05 0.886 ATACCATGATCACG
M6453_1.02 RFX3 chr1 + 162145564 162145577 9.16e-05 0.886 TCACCCTGGTCACA
M6453_1.02 RFX3 chr20 - 44018776 44018789 9.19e-05 0.886 TTGTCCTGGAAACG
M6453_1.02 RFX3 chr17 + 63140316 63140329 9.23e-05 0.886 ttgccataacaaac
M6453_1.02 RFX3 chr9 - 111961860 111961873 9.23e-05 0.886 ATGCCATGGAAATC
M6453_1.02 RFX3 chr2 - 178484717 178484730 9.23e-05 0.886 TTAACATGGTGACC
M6453_1.02 RFX3 chr3 + 4680130 4680143 9.28e-05 0.886 TTTCCATAGTAAAA
M6453_1.02 RFX3 chr1 - 42177704 42177717 9.28e-05 0.886 CAGCCATGGTAAGG
M6453_1.02 RFX3 chr9 - 87499683 87499696 9.28e-05 0.886 AAACCAAAGCAACC
M6453_1.02 RFX3 chr10 + 110765990 110766003 9.28e-05 0.886 TTTCCATAGTAATA
M6453_1.02 RFX3 chr1 - 47329164 47329177 9.31e-05 0.886 CTGCCACAGCAACT
M6453_1.02 RFX3 chrX + 18355043 18355056 9.37e-05 0.886 CCACCCTGGCCACG
M6453_1.02 RFX3 chr10 + 26755663 26755676 9.37e-05 0.886 GCACCCTGGCCACG
M6453_1.02 RFX3 chr13 + 35499059 35499072 9.37e-05 0.886 TTGCTATAGCAAGC
M6453_1.02 RFX3 chr6 + 154852740 154852753 9.37e-05 0.886 TTTCTGTGGTAACC
M6453_1.02 RFX3 chr12 + 54116329 54116342 9.4e-05 0.886 GATCCATGGCAAAC
M6453_1.02 RFX3 chr19 - 45227737 45227750 9.43e-05 0.886 ATTCCATGAGAACC
M6453_1.02 RFX3 chr2 + 61762610 61762623 9.43e-05 0.886 TAACCATGACATCA
M6453_1.02 RFX3 chr5 - 172355138 172355151 9.43e-05 0.886 TAACCATGACACCA
M6453_1.02 RFX3 chr18 - 54776583 54776596 9.47e-05 0.886 GTATCATGGCAGCA
M6453_1.02 RFX3 chr13 + 33214940 33214953 9.51e-05 0.886 TTTCCAGGGAAACA
M6453_1.02 RFX3 chr5 + 35617889 35617902 9.51e-05 0.886 CTTCCATAGCAAAG
M6453_1.02 RFX3 chr18 + 69846369 69846382 9.51e-05 0.886 GCTCCATGGCATCT
M6453_1.02 RFX3 chr19 - 47108252 47108265 9.55e-05 0.886 GTGCCAGAGCAACT
M6453_1.02 RFX3 chr3 - 190973051 190973064 9.6e-05 0.886 TAACTAGGGCAACA
M6453_1.02 RFX3 chr14 - 73825721 73825734 9.64e-05 0.886 CTGCCCTGGCAAAC
M6453_1.02 RFX3 chr21 + 15204472 15204485 9.68e-05 0.886 GCTCCATGTCAACT
M6453_1.02 RFX3 chr5 + 34608894 34608907 9.68e-05 0.886 TTACCATGGCCCCA
M6453_1.02 RFX3 chr15 - 69755646 69755659 9.68e-05 0.886 TCACCAAAGAAACC
M6453_1.02 RFX3 chr15 + 69755705 69755718 9.68e-05 0.886 CTACCCTTGTAACC
M6453_1.02 RFX3 chr2 - 19670723 19670736 9.75e-05 0.887 CTACTTTGGTAACA
M6453_1.02 RFX3 chr9 - 87140837 87140850 9.75e-05 0.887 TTAGCATGGCCACA
M6453_1.02 RFX3 chr3 + 184524132 184524145 9.81e-05 0.89 actccatagaaact
M6453_1.02 RFX3 chr7 + 33669308 33669321 9.93e-05 0.893 ATCCTCTGGCAACA
M6453_1.02 RFX3 chr17 - 49362877 49362890 9.93e-05 0.893 GCACCCTGGCAATC
M6453_1.02 RFX3 chr2 + 142130668 142130681 9.93e-05 0.893 GCACCCTGGCAATC
M6453_1.02 RFX3 chr7 + 120806856 120806869 9.97e-05 0.893 ACACCATGGCTAAC

DEBUGGING INFORMATION

Command line:

/software/meme/4.12.0/bin/fimo --parse-genomic-coord --verbosity 1 --oc /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/PRDM4.IDR0.05.filt.narrowPeak.top3000.summitPlusMinus250bp.MemeChipResultsDefaultMax/fimo_out_20 --bgfile /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/PRDM4.IDR0.05.filt.narrowPeak.top3000.summitPlusMinus250bp.MemeChipResultsDefaultMax/background --motif M6453_1.02 /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/MotifData/motif_databases/CIS-BP/Homo_sapiens.meme /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/PRDM4.IDR0.05.filt.narrowPeak.top3000.summitPlusMinus250bp.MemeChipResultsDefaultMax/PRDM4.IDR0.05.filt.narrowPeak.top3000.summitPlusMinus250bp.fa

Settings:

output_directory = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/PRDM4.IDR0.05.filt.narrowPeak.top3000.summitPlusMinus250bp.MemeChipResultsDefaultMax/fimo_out_20 MEME file name = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/MotifData/motif_databases/CIS-BP/Homo_sapiens.meme sequence file name = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/PRDM4.IDR0.05.filt.narrowPeak.top3000.summitPlusMinus250bp.MemeChipResultsDefaultMax/PRDM4.IDR0.05.filt.narrowPeak.top3000.summitPlusMinus250bp.fa
background file name = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/PRDM4.IDR0.05.filt.narrowPeak.top3000.summitPlusMinus250bp.MemeChipResultsDefaultMax/background alphabet = DNA max stored scores = 100000
allow clobber = true compute q-values = true parse genomic coord. = true
text only = false scan both strands = true max strand = false
threshold type = p-value output theshold = 0.0001 pseudocount = 0.1
alpha = 1 verbosity = 1

This information can be useful in the event you wish to report a problem with the FIMO software.


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