Database and Motifs High-scoring Motif Occurences Debugging Information



FIMO - Motif search tool

FIMO version 4.12.0, (Release date: Tue Jun 27 16:22:50 2017 -0700)

For further information on how to interpret these results or to get a copy of the FIMO software please access http://meme.nbcr.net

If you use FIMO in your research, please cite the following paper:
Charles E. Grant, Timothy L. Bailey, and William Stafford Noble, "FIMO: Scanning for occurrences of a given motif", Bioinformatics, 27(7):1017-1018, 2011. [full text]


DATABASE AND MOTIFS

DATABASE /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/PRDM4.IDR0.05.filt.narrowPeak.top3000.summitPlusMinus250bp.MemeChipResultsDefaultMax/PRDM4.IDR0.05.filt.narrowPeak.top3000.summitPlusMinus250bp.fa
Database contains 3000 sequences, 1500000 residues

MOTIFS /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/MotifData/motif_databases/CIS-BP/Homo_sapiens.meme (DNA)

MOTIF WIDTH BEST POSSIBLE MATCH
M0085_1.02 10 TTGCCTGAGG
M0104_1.02 11 ATATTAATTAA
M0105_1.02 9 TTTTAATTG
M0108_1.02 11 GATAATATTGA
M0177_1.02 10 ACCATATGTT
M0178_1.02 10 AACAGCTGTT
M0189_1.02 8 GCACGTGA
M0195_1.02 10 ACCATATGGT
M0196_1.02 10 GGCACGTGTA
M0198_1.02 10 AGCCCGTGCG
M0199_1.02 13 TAACGACACGTGC
M0211_1.02 8 GCACGTGT
M0212_1.02 10 GGCACGTGCC
M0214_1.02 9 AACATATGT
M0216_1.02 10 CGCAGCTGTG
M0217_1.02 10 ACCATATGGT
M0300_1.02 10 AATGACGTCA
M0305_1.02 9 GCCACGTGT
M0307_1.02 8 ATACGTTT
M0395_1.02 8 GTACTAAT
M0396_1.02 10 AACGGTAGCA
M0398_1.02 11 AGGAAGTGCAA
M0404_1.02 10 AAGGGGGGCA
M0405_1.02 10 TGGGCGTGGC
M0408_1.02 10 ATGTGCACAT
M0413_1.02 10 GTTGCGGGAT
M0415_1.02 8 ATAACGGT
M0422_1.02 10 CCGGGGGGTC
M0424_1.02 10 TTTGACAGCT
M0428_1.02 8 AGGAGCAC
M0431_1.02 9 ACGGTAGCA
M0432_1.02 9 CGCGCGCAC
M0433_1.02 10 ATCTAGAACA
M0436_1.02 10 TTGTTTATTG
M0437_1.02 9 TATATATAT
M0442_1.02 9 AATGCAGTG
M0443_1.02 10 TGGGCGTGGC
M0594_1.02 9 ATTTGAATT
M0603_1.02 7 TTAGCGG
M0607_1.02 9 TCGTAAATA
M0608_1.02 10 GGGGGCGTAA
M0609_1.02 10 TCCCGCTGCC
M0610_1.02 9 ATCGCGTTA
M0629_1.02 11 AATGTATCAAT
M0630_1.02 10 AATGTATCAA
M0632_1.02 10 AATGTATCAA
M0633_1.02 10 TAATGTATTA
M0635_1.02 13 AACATGTATAAAA
M0714_1.02 10 AACCGGAAGT
M0718_1.02 10 ATGTAAACAA
M0719_1.02 8 GTAAACAA
M0728_1.02 12 AATAAACAAACA
M0736_1.02 8 GTAAACAA
M0737_1.02 10 TATGTAAACA
M0747_1.02 10 AATGTAAACA
M0756_1.02 9 GTAAACAAA
M0887_1.02 9 CCTAATGAG
M0890_1.02 8 GTAATCAA
M0891_1.02 10 TTAATTGGTT
M0892_1.02 10 CCTAATTACC
M0893_1.02 10 ATTAATTAAT
M0894_1.02 8 TTAATTAG
M0896_1.02 8 TTAATTAG
M0897_1.02 10 TTTTATGGGC
M0898_1.02 8 TTACGTAA
M0900_1.02 8 TTAATTGG
M0901_1.02 8 CTTGTCAA
M0905_1.02 9 TTAATTACC
M0906_1.02 10 AATTAATTAG
M0931_1.02 9 TAATTAATT
M0937_1.02 7 TGATACC
M0942_1.02 8 TTGTAATT
M0943_1.02 8 GCTAATTA
M0949_1.02 7 TTAATGA
M0952_1.02 8 TGATACCC
M0958_1.02 7 CTAATTA
M0961_1.02 9 CTAATTGGT
M0969_1.02 9 CTAATCAGC
M0975_1.02 9 TAATTAATT
M0994_1.02 9 ATGATACCC
M0996_1.02 7 GAAATCA
M0999_1.02 9 ATTAATTAC
M1007_1.02 9 TTTATGACC
M1012_1.02 9 TTAATGACT
M1016_1.02 7 GTGATAC
M1018_1.02 7 TAATTAA
M1025_1.02 8 GCTAATTA
M1027_1.02 9 TTAATTACC
M1030_1.02 9 ACCACTTAA
M1034_1.02 7 GCAATTA
M1039_1.02 9 GCTAATTGG
M1049_1.02 10 ATGATACCCC
M1070_1.02 9 TTAATGACC
M1071_1.02 8 TTAATGAC
M1073_1.02 9 TTAATGACC
M1110_1.02 10 GGGCAATAGA
M1125_1.02 10 GCTAATTGGT
M1157_1.02 10 TTTTATGACC
M1163_1.02 9 ATTAATTAC
M1266_1.02 10 GACCGAAACC
M1281_1.02 9 CTTACGCAA
M1358_1.02 9 TAACCCTAG
M1359_1.02 10 TTTTGCGCCA
M1418_1.02 8 TGGTACCA
M1432_1.02 10 ATTGACCTCT
M1458_1.02 10 ACTGACCTCG
M1507_1.02 10 AATTTTGGCT
M1528_1.02 10 CCATGGCAAC
M1529_1.02 10 CCATAGCAAC
M1545_1.02 9 CGTACGTCA
M1581_1.02 10 TTTGCTGACT
M1582_1.02 11 ATATATAATAA
M1583_1.02 8 TTCATTGA
M1589_1.02 10 GCAGAACAAT
M1592_1.02 8 AAAACAAT
M1594_1.02 10 CATTGTTTTT
M1601_1.02 9 ATTGTTTTC
M1605_1.02 10 ATTCATCTTT
M1628_1.02 11 AGGTGTGAAGA
M1668_1.02 12 TCCAAACGAGAT
M1838_1.02 15 CATTGCCTCAGGGCA
M1841_1.02 15 GAACATTCTGTTCTT
M1863_1.02 8 GTAAACAT
M1868_1.02 14 ACAGATAAGAATCT
M1871_1.02 10 TGGGTGGGGC
M1882_1.02 21 AAAGTGAAAGTGAAAGTAAAA
M1884_1.02 15 AGCTAAAAATAGCAT
M1889_1.02 10 AAGCACATGG
M1890_1.02 18 AGAGTGCTGATTGGTCCA
M1906_1.02 11 GGGGGCGGGGC
M1915_1.02 20 GCAAGGCATTATGGGAAATC
M1917_1.02 11 GGTCACGTGGC
M1919_1.02 12 CAAGATGGCGGC
M1925_1.02 11 TATTGTGCAAT
M1926_1.02 9 CAGGTGAGG
M1927_1.02 8 GCCACGTG
M1928_1.02 11 GGGAATTTCCC
M1929_1.02 15 CATGTCTGGGCATGT
M1934_1.02 20 AGGTCAGGGTGACCTGGGCC
M1950_1.02 6 GTGGAT
M1955_1.02 11 TTTCCAGGAAA
M1963_1.02 14 GGGGCCGAGGCCTG
M1968_1.02 11 TCCCTGGGGAC
M1970_1.02 6 TGCCAA
M2065_1.02 15 AGGTCAGGGTGACCT
M2264_1.02 8 GCCATCTG
M2267_1.02 11 TTTTATGGCTT
M2268_1.02 11 TATTGCACAAT
M2270_1.02 11 TAATTTAATCA
M2273_1.02 11 GGGCGGGAAGG
M2275_1.02 13 GAACCAGGAAGTG
M2277_1.02 11 ACAGGAAGTGG
M2278_1.02 11 TGTGACTCATT
M2281_1.02 11 TCCAATCCACA
M2283_1.02 15 CAAAAGTAAACAAAG
M2286_1.02 15 TGGACTTTGGACTCT
M2287_1.02 13 GGCCATAAATCAC
M2289_1.02 13 AAGATGATGTCAT
M2292_1.02 11 GGTGACTCATC
M2296_1.02 15 CTGAGTCAGCAATTT
M2299_1.02 13 AGGGACAGCTGCA
M2301_1.02 15 AAATGGACCAATCAG
M2303_1.02 15 TGACCTCTGACCCCT
M2305_1.02 11 TGCGCAGGCGC
M2306_1.02 13 TTCATTTGCATAT
M2307_1.02 15 AGAAAGTGAAAGTGA
M2310_1.02 15 CAAACCACAAACCCC
M2313_1.02 10 CCATTGTTTT
M2314_1.02 15 GGGAGGGGGCGGGGC
M2319_1.02 14 TTCCTTTGATCTTT
M2321_1.02 20 AGACATGCCCAGACATGCCC
M2323_1.02 15 CAGATCTCGCGAGAG
M2385_1.02 11 AAGTAAACAAA
M2387_1.02 10 GTGGGGTGAT
M2388_1.02 10 ATGGGGTGAT
M2390_1.02 8 CAGGAAGG
M2391_1.02 10 GGGGCGGGGC
M2392_1.02 19 GTTGCCATGGCAACCGCGG
M4344_1.02 8 GGTTGCTA
M4427_1.02 21 GTGGCCACCAGGGGGCGCTGT
M4428_1.02 14 AGAACATTCTGTTC
M4438_1.02 15 AGGTCATGGTGACCT
M4444_1.02 14 AGGGGATTTCCCAG
M4451_1.02 11 GGTCACGTGAC
M4452_1.02 15 TCTCGATATGACTCA
M4453_1.02 15 AAGAGGAAGTGAAAC
M4454_1.02 15 AAATCTCGCGAGAAC
M4459_1.02 20 GTGCGGGGGCGGGGGGGGGG
M4461_1.02 21 GCCTTCTGGGAATTGTAGTTC
M4462_1.02 11 CGCCGGAAGTG
M4463_1.02 18 AATGTGGAAATGAGTCAG
M4467_1.02 15 ATGCCAAAAATAGCA
M4469_1.02 14 TCCATGGTGCTGAA
M4471_1.02 15 GCAGCCAAGCGTGAC
M4473_1.02 15 GCCGGCCAATCAGAG
M4476_1.02 15 TCACCTGTTGCTAGG
M4477_1.02 19 CTATGGCCATATAAGGCAA
M4478_1.02 20 CAGGTGATTTCCGGGAAATG
M4479_1.02 11 GCAGCAGCTGT
M4481_1.02 15 GGTCACGTGGCCCGG
M4484_1.02 15 CTGGGAATTGTAGTC
M4509_1.02 17 ATTTGCATAACAAAGGA
M4511_1.02 8 TGACCTCT
M4522_1.02 10 CCGGAAGTGG
M4525_1.02 15 AGCCTCAGGGCATGG
M4526_1.02 15 GGGGGGTGACTCATC
M4527_1.02 21 GGACTACAACTCCCAGCAGGC
M4532_1.02 10 CCACGTGCTC
M4536_1.02 15 GGGGAGGGCGCGCGG
M4537_1.02 15 GGCGGGAAATTTGAA
M4543_1.02 11 GGAACCACGTG
M4545_1.02 15 AGAAAGTGAAAGTGA
M4551_1.02 17 TTCATACTGGAGAGAAA
M4553_1.02 10 GGTCACGTGC
M4565_1.02 14 CAGGATGAGTCACC
M4567_1.02 15 GCAAAGTAAACAGAG
M4569_1.02 18 GTCCCGGGTTCGAATCCC
M4572_1.02 15 TGCTGACTCAGCAAA
M4600_1.02 11 GCAGATAAGGA
M4604_1.02 21 GGGGAGGAGGGAGGGGAGGAG
M4612_1.02 15 CCGCCAGGGGGCGCC
M4619_1.02 11 GGGTGACTCAT
M4623_1.02 15 CGGTGACTCATCCTT
M4629_1.02 17 CATGACTCAGCAATTTT
M4635_1.02 15 GAAAATGAAACTGAA
M4636_1.02 21 CTGCCCTCATCCAAGATGGCG
M4640_1.02 15 GGGCAGGGGTCTCGG
M4665_1.02 15 CAGATAAGAATCTGT
M4680_1.02 8 GTCACGTG
M4681_1.02 10 TGCTGAGTCA
M4692_1.02 10 ACTACAACTC
M4698_1.02 15 CTGGACTTTGGACTC
M4702_1.02 8 TGACCTTT
M4708_1.02 10 TATGCAAATA
M4840_1.02 11 AAATGAGCAAC
M4850_1.02 21 TGTTGTGTCCGTGCCATCTGG
M4930_1.02 11 AAATCGTGACT
M4971_1.02 10 GTAACAGCTG
M5116_1.02 9 ACCACCTGT
M5209_1.02 11 GTGGGCGTGGC
M5234_1.02 10 GGTCACGTAC
M5284_1.02 10 GCTAATTAGC
M5287_1.02 13 CTAATTAAATTAA
M5291_1.02 13 TTAATTTAATTAA
M5292_1.02 13 GGATGATGCAATA
M5293_1.02 14 CGATGACGTCATCG
M5294_1.02 10 GTTAAACGGT
M5300_1.02 17 TAATCGGTATTTAATTG
M5302_1.02 14 TGATGACGTCATCA
M5303_1.02 17 TGCTTTCTAGGAATTCA
M5304_1.02 10 ACCATATGGT
M5307_1.02 12 AAACATATGTTT
M5308_1.02 10 ACCATATGTT
M5310_1.02 8 TTAATTGG
M5320_1.02 15 CCCGCATACAACGAA
M5321_1.02 10 AACACGTGTT
M5322_1.02 8 TTTTTATT
M5323_1.02 14 TGATGACGTCATCG
M5325_1.02 14 TGATGACGTGGCAT
M5335_1.02 18 ATCGATAATTTTATCGAT
M5339_1.02 10 GATAATTAGG
M5342_1.02 8 GTAATTGG
M5343_1.02 8 ATAATTAC
M5344_1.02 8 GTAATTGG
M5345_1.02 10 GTTAATCCGC
M5346_1.02 10 GCTAATCCGT
M5348_1.02 13 CTAATCTAATTAA
M5349_1.02 13 CTAATTTAATCAA
M5363_1.02 12 TTTCCCGCCAAA
M5377_1.02 12 AACCCGGAAGTG
M5388_1.02 10 GCTAATTAGC
M5390_1.02 10 GCTAATTGGG
M5394_1.02 10 GTTAATTGGA
M5398_1.02 10 ACCGGAAGTG
M5414_1.02 10 GTTAATTGGT
M5420_1.02 10 ACCGGAAGTA
M5421_1.02 11 AACCGGAAATA
M5422_1.02 10 ACCGGAAGTG
M5425_1.02 15 CCGGAAGCGGAAGTG
M5427_1.02 10 GCTAATTACC
M5428_1.02 10 GCTAATTACC
M5430_1.02 10 AACACCTGTT
M5435_1.02 14 TCGCTGTGTCATTC
M5445_1.02 14 AGTAAATATTTTTT
M5446_1.02 7 GTAAACA
M5460_1.02 7 GTAAACA
M5471_1.02 14 GTAAACATGTTTAC
M5480_1.02 10 GCTAATTAGT
M5481_1.02 10 GCTAATTGGT
M5487_1.02 10 TATGCGGGTA
M5490_1.02 16 GCTTCGTGGGGGGTCT
M5491_1.02 14 CTTCGCGGGGGGTC
M5493_1.02 8 GTACGTAA
M5497_1.02 17 AACCGGTTTAACCGGTT
M5500_1.02 10 GCTAATCCCC
M5501_1.02 10 CCTAATCCGC
M5502_1.02 10 TTTAATTAGG
M5503_1.02 10 TTTAATTAGT
M5504_1.02 12 TGGCACGTGCCG
M5506_1.02 12 TGGCACGTGCCA
M5509_1.02 10 GGCACGTGTC
M5512_1.02 9 GGTGGGCAT
M5517_1.02 10 ACTAGTTAAC
M5518_1.02 11 TTTTAATTGCT
M5519_1.02 11 TTTTAATTGGT
M5520_1.02 11 TGTTAATTGCT
M5530_1.02 12 TATAATCGTTTT
M5541_1.02 10 GTTAATTACT
M5542_1.02 10 GCTAATTAGT
M5543_1.02 10 TTTAATTAGT
M5544_1.02 10 TTTTTATGGG
M5547_1.02 11 GGTCGTAAAAT
M5551_1.02 9 TTTTATTAC
M5553_1.02 10 CCAATAAAAA
M5555_1.02 10 GTCGTAAAAA
M5557_1.02 9 GTAATAAAA
M5563_1.02 10 GCTAATTAGC
M5567_1.02 13 GAACGTTCTAGAA
M5568_1.02 15 TTCGAAACGTTCGAA
M5571_1.02 10 GACAGGTGTA
M5581_1.02 12 CATGTCATGTAA
M5582_1.02 12 CATGTCATGTAA
M5583_1.02 8 TTAAGTGC
M5584_1.02 13 TTAATCTAATTAA
M5587_1.02 9 ATGACTCAT
M5591_1.02 18 CAAAAAGGGGCGTGGCAT
M5592_1.02 14 AAGGGGGCGTGGCC
M5593_1.02 11 GGGGGCGTGGC
M5594_1.02 13 CTCGACCTAATTA
M5602_1.02 8 TTAATTGG
M5604_1.02 8 TTAATTAA
M5605_1.02 8 TTAATTAA
M5616_1.02 12 GCTATAAATAGC
M5621_1.02 8 CCTGTCAA
M5623_1.02 10 GCTAATTAAC
M5624_1.02 10 AGTAATTAAC
M5627_1.02 10 CACAGGTGTT
M5628_1.02 8 AGGTGTGA
M5631_1.02 10 GTTAATTAGA
M5632_1.02 10 ATCACGTGAT
M5634_1.02 10 ACCACGTGCC
M5635_1.02 10 TTTAATTACT
M5636_1.02 10 AACAGCTGTT
M5637_1.02 18 TAATTGGTTTTTAATTGC
M5643_1.02 12 ACCGTTAAACGG
M5652_1.02 10 GCCATATGGT
M5653_1.02 10 GACATATGTT
M5660_1.02 15 TTGGCACGGTGCCAA
M5662_1.02 15 TTGGCACAGTGCCAG
M5664_1.02 15 TTGGCACCGTGCCAA
M5672_1.02 10 GCTAATTAGC
M5689_1.02 11 AATTTGCTGAC
M5690_1.02 10 AACATATGTT
M5691_1.02 10 ACCATATGTT
M5693_1.02 10 ACCATATGTT
M5697_1.02 14 ATTATTGATTTTTT
M5702_1.02 17 TGCAGTCATGCGTGACG
M5704_1.02 10 TAATCGATTA
M5705_1.02 8 CTAATTAG
M5709_1.02 10 TAATCGATTA
M5711_1.02 17 TGCAGTCATGCGTGACG
M5714_1.02 11 TAATTTAATTA
M5715_1.02 11 TAATTTAATTA
M5717_1.02 9 CTTAATCCC
M5720_1.02 9 CTTAATCCC
M5722_1.02 12 TGACACCTGTCA
M5729_1.02 9 ATTTGCATA
M5735_1.02 13 AAATTAGCATAAT
M5738_1.02 9 ATTTGCATA
M5740_1.02 14 ATGAATAATTAATG
M5743_1.02 16 ATGCATAATTAATGAG
M5744_1.02 9 ATTTGCATA
M5746_1.02 10 ATAATGAGCT
M5750_1.02 13 GGGGGCCTTGAAA
M5753_1.02 12 CAAGACGCCTTA
M5771_1.02 10 GTTAATTGGC
M5772_1.02 8 TTAATTGG
M5777_1.02 16 CGTTGCCATGGCAACG
M5782_1.02 9 GGATAATCC
M5804_1.02 15 GAGCAACAGGTGGTT
M5805_1.02 13 ATGCAACAGGTGG
M5807_1.02 8 TTAATTGG
M5815_1.02 12 ACAATAACATTG
M5825_1.02 15 AACACTACCATTGTT
M5835_1.02 16 AACAATGTTCATTGTT
M5838_1.02 16 AACAATGTGCAGTGTT
M5856_1.02 12 AGTGGGCGTGGC
M5857_1.02 11 ACCCGGATGTA
M5865_1.02 14 AAAAAGAGGAAGTA
M5873_1.02 10 AGGTGTGAAA
M5875_1.02 20 AGGTGTGAAAAAAGGTGTGA
M5880_1.02 19 AGGTGTGAAATTCACACCT
M5882_1.02 20 TTTCACACCTAGGTGTGAAA
M5883_1.02 16 TCACACCTTCACACCT
M5889_1.02 16 GGTGTGAATTCACACC
M5896_1.02 8 AGGTGTGA
M5903_1.02 12 AAAGATCAAAGG
M5932_1.02 10 GTCACGTGAT
M5934_1.02 12 TGACAGCTGTCA
M5935_1.02 12 TGACAGCTGTCA
M5941_1.02 13 CTAATTTAATTAG
M5944_1.02 8 CTAATTAC
M5945_1.02 8 CTAATTAC
M5949_1.02 8 CTAATTAT
M5955_1.02 11 TAATGGCGGAC
M5958_1.02 13 TATGTCGCGATAG
M5959_1.02 17 TTTCGCCTGGCACGTCA
M5962_1.02 12 TTCGGTGGTCGC
M5965_1.02 15 GCACAGCGGGGGGTC
M5967_1.02 19 ATGTTAAATGTAGATTAAG
M5970_1.02 17 GTCGTGTTGTGGGAAAG
M5971_1.02 14 TCGAGGCTAGACCA
M5972_1.02 17 GAGTATTATGGGATGGA
M5973_1.02 18 AGGTGTTCTGTTAACACT
M5974_1.02 12 GGGTTCGAGGGT
M5976_1.02 17 TTCGTGGCATTTTTCTA
M5977_1.02 10 GTGGGGGGGG
M5979_1.02 12 TGTGGGAAAAGC
M5980_1.02 10 AGGTAGGTAC
M5981_1.02 15 TTTTCAGTGTGTGCA
M5998_1.02 12 GGTGACGTCATT
M6037_1.02 12 TTTGTCATGTAG
M6111_1.02 13 AGAAAGGGTTAAT
M6114_1.02 10 AAAGCAAACA
M6115_1.02 15 CATGTCTGGGCATGT
M6119_1.02 15 AAAAAGAGGAAGTGG
M6123_1.02 15 GGGGTGGGGGAGGGG
M6131_1.02 21 CCGGTTCAAACCGGTTCTGGC
M6139_1.02 9 GCACGCAAC
M6140_1.02 18 ATTGGTTTTATTGGTTAA
M6141_1.02 12 TAATTCAATTAT
M6144_1.02 10 GCCCCCGGGC
M6146_1.02 14 ACGCGCCTCGGGCG
M6147_1.02 22 TTTAATTTGATTTCGATTAATT
M6149_1.02 13 TGTTAGTATTGTG
M6150_1.02 12 GCCTCCCACGCC
M6151_1.02 8 TCACGTGC
M6152_1.02 10 GTGACGTCAC
M6154_1.02 12 TAAGGAAGAAGG
M6155_1.02 12 GTGGTGACGTGG
M6157_1.02 10 TCATTAATTG
M6159_1.02 16 TTCCTAGAAAGCTTTT
M6161_1.02 20 ACCGGGTCACGTGCAGAAGG
M6162_1.02 14 GGGTCACGTGTCCA
M6163_1.02 12 TTTGTTGTTTTC
M6164_1.02 25 ACATAGTGACACCTAGGTGTGAAAT
M6166_1.02 15 ATTATGTTAAATCAC
M6167_1.02 8 ACATAAAT
M6171_1.02 11 AATTGTGCAAT
M6172_1.02 12 AAGATTGCGCAA
M6173_1.02 13 CAGATTGCAAAAT
M6174_1.02 11 AGCCAATCAGC
M6176_1.02 12 TGACCTTTGACC
M6180_1.02 9 GTGACGTCA
M6181_1.02 11 CACTGACGTCA
M6182_1.02 8 CTAATCCC
M6184_1.02 14 AGGGGGATCGATGG
M6185_1.02 7 CGTTGGC
M6186_1.02 11 TGTTACATAAC
M6187_1.02 13 GGGGATTGCATTT
M6188_1.02 8 ATAATTAT
M6189_1.02 10 GATAATTACA
M6191_1.02 10 GGCGCGAAAC
M6192_1.02 10 CGCGCGAAAC
M6194_1.02 10 CGCGCCAAAC
M6196_1.02 13 TAAGGCGCGAAAA
M6197_1.02 9 CGTGACGTC
M6199_1.02 11 GGCGTGGGCGG
M6200_1.02 11 AGAGTGGGTGT
M6201_1.02 11 GGCGGCAGGGC
M6204_1.02 15 TAGCAGGAAGTGAGT
M6205_1.02 14 GGCAAACAGGAAAT
M6206_1.02 11 ATAAGGAAGTA
M6207_1.02 9 ACCGGAAGT
M6208_1.02 12 CCCAGGAAGTGC
M6210_1.02 13 TGCCCACGTGGTG
M6211_1.02 14 CGGGGATACGAAAT
M6212_1.02 13 CCCACGTACGCAC
M6213_1.02 11 ACCGGAAATCC
M6215_1.02 9 TGACCTTGA
M6216_1.02 9 TGACCTTGA
M6221_1.02 11 GCGGGAAGTGG
M6222_1.02 8 CAGGAAGT
M6223_1.02 13 GACAGGAAGTAAC
M6224_1.02 17 GCCACAGGAAGTAACAC
M6225_1.02 16 AAGATAAGATAAGATA
M6226_1.02 10 CAGGAAATAA
M6228_1.02 10 CTGACTCATC
M6234_1.02 13 GCAAAGCAAACAA
M6235_1.02 15 CTTAAGTAAACAATG
M6236_1.02 15 TCTGGCAAAACAAAC
M6237_1.02 9 AAACAAACA
M6238_1.02 11 AAAATAAACAT
M6239_1.02 11 AAAAGTAAACA
M6240_1.02 12 AACCAATCAGAG
M6241_1.02 10 TAAATAAACA
M6242_1.02 13 TAAACAAAAACAA
M6244_1.02 13 AAAAACAAACAAC
M6245_1.02 16 AAAAAGTAAACAAACC
M6246_1.02 13 AGGTAAACAAACA
M6247_1.02 9 AATAAACAA
M6249_1.02 9 AAACAAATT
M6250_1.02 12 AAATAAACAATT
M6251_1.02 12 TTGTGTTTTTTT
M6256_1.02 9 ACAGATAAC
M6257_1.02 17 TAAGAGATAACTTAGAT
M6258_1.02 7 AAGATAA
M6259_1.02 14 CACATGCGGGTATT
M6262_1.02 11 TGCAGTGATTT
M6263_1.02 10 GCTGTGATTT
M6264_1.02 11 CTGGGTGGTCT
M6265_1.02 11 GTGGGTGGTCT
M6266_1.02 11 TTGGGTGGTCC
M6267_1.02 10 GTGGGGGGTA
M6268_1.02 12 AATGCCAGACGC
M6269_1.02 9 ATTCATTGA
M6270_1.02 20 AGGGACGCAGCTGCTCCCCA
M6271_1.02 13 GGGCTCGTGGCGG
M6272_1.02 16 AGGCCACGTGCCGGAT
M6273_1.02 17 GGGGGCACGTGGCATTA
M6274_1.02 9 GGGTTGCCC
M6275_1.02 12 GCGTACGTGCGG
M6276_1.02 16 GCGCTAGCGGACGTTA
M6277_1.02 13 CTGTTACATAATC
M6278_1.02 12 TAGGGCTGCAAA
M6279_1.02 7 AAAATAC
M6280_1.02 15 AATAATCGCGAATAT
M6281_1.02 15 GGTTAATTATTAACC
M6282_1.02 14 GTTAATCATTAACC
M6285_1.02 14 TTTATTGATTTTTT
M6287_1.02 14 AGAATGTTCTAGAA
M6289_1.02 12 TCATAAATTATC
M6290_1.02 11 CCAATAAAACC
M6291_1.02 10 CATCCATCAA
M6292_1.02 10 CATTAATCAA
M6293_1.02 15 TCCAATCTATTGATT
M6295_1.02 10 CCATCCATCA
M6296_1.02 13 TGCATCAATCATT
M6297_1.02 10 CATTAATCAA
M6298_1.02 11 GCATTAATCAA
M6299_1.02 15 AAAGTAATAAATCAT
M6300_1.02 14 GGGCATCAATCAAA
M6301_1.02 10 AATTAAAGCA
M6302_1.02 11 TCCCTAATAAA
M6303_1.02 8 TTAATTGA
M6304_1.02 10 TAATTAAATT
M6306_1.02 12 TGTCAGGGGGCA
M6308_1.02 14 GGAAAGTGAAAGCA
M6309_1.02 17 GGAAAGCGAAACTGAAA
M6311_1.02 20 TAAAGGAAAGCCAAAAGTGA
M6312_1.02 10 GAAAGTGAAA
M6313_1.02 15 GAGAAAGTGAAACTG
M6314_1.02 12 GAAAGCGAAACT
M6315_1.02 7 GTTAATG
M6316_1.02 9 CCAGGTGCA
M6321_1.02 17 GGCGGGGAGGTGGGGGC
M6322_1.02 11 CAGGGTGTGGC
M6323_1.02 15 TGCCTGGGTGTGGCT
M6324_1.02 10 TGGGTGGGGC
M6325_1.02 8 GGGGGCGG
M6326_1.02 9 CAGGGGGTG
M6327_1.02 7 CTTTGAT
M6328_1.02 13 CACTTTTAATTAG
M6329_1.02 13 AAAATTAATTAAT
M6330_1.02 21 GTGCTGACCCCGCAGCCTTCG
M6331_1.02 9 TGCTGACGG
M6332_1.02 8 TTGCTGAC
M6333_1.02 7 CATGACT
M6336_1.02 17 GGGGGGGGGAGGGAGGG
M6337_1.02 11 GGGGCCGGAGG
M6338_1.02 17 TACAACAACCTGTTCTT
M6339_1.02 7 CTCCGGG
M6342_1.02 12 GCTAAAAATAGC
M6343_1.02 13 CATAAAACTGTCA
M6344_1.02 13 TGACAGCTGTCAA
M6345_1.02 10 ATCACATGAC
M6346_1.02 19 CCACGGCGGTGTCACATGC
M6347_1.02 7 TAATTGT
M6348_1.02 17 AGTGCCGTGTGCAAAAC
M6349_1.02 10 TCAACCTGCA
M6350_1.02 7 CAGTTGG
M6352_1.02 8 CCACGTGG
M6353_1.02 7 GCAGCTG
M6354_1.02 9 GACAGCTGC
M6355_1.02 13 TGACAGCTGCTGC
M6356_1.02 9 GGTGGGGAA
M6357_1.02 8 TTTAATGG
M6358_1.02 12 CGGCAGATGGCC
M6359_1.02 7 AATGACT
M6360_1.02 12 CATGACTCAGCA
M6361_1.02 13 ATGGAAATTTCCA
M6363_1.02 9 AATTTTCCA
M6364_1.02 9 AGTTTTCCA
M6365_1.02 10 AAATTTTCCT
M6366_1.02 15 CATGGATTTTTCCAC
M6368_1.02 14 ATGCATTACATAAC
M6370_1.02 11 GGAATCTCCCT
M6373_1.02 14 CAGCCAATCAGCGC
M6374_1.02 10 CTCAAGTGCT
M6375_1.02 12 AAACCACTTAAA
M6376_1.02 7 TCAAGTG
M6377_1.02 9 TTCAAGGAC
M6378_1.02 13 AATAAGTATATAA
M6379_1.02 11 AGTTAAGTGGA
M6380_1.02 9 TTAATTGGT
M6381_1.02 10 TCTCCCACGC
M6382_1.02 14 TTTGACCTACTTTT
M6383_1.02 19 CGTTGACCTTTGACCTTTA
M6384_1.02 14 AGGTCATTGACCCT
M6385_1.02 19 CTGAACTTTTTTGACCTCA
M6387_1.02 18 CTGAACTTTCCTGACCCC
M6389_1.02 13 CTGACCTCTGGCC
M6391_1.02 14 TGACTTTTGACTTT
M6392_1.02 18 TCAATTGAACTTTGTCCT
M6393_1.02 9 GTGACCTTT
M6394_1.02 9 GTGACCTTT
M6395_1.02 10 CTGACCTTTG
M6396_1.02 10 TGGCCTTGAA
M6397_1.02 13 TGACCTTGAACTT
M6399_1.02 21 GTCTTGTTATTGATTTTTTTT
M6400_1.02 8 CTAATCCT
M6401_1.02 15 CTTTAATCCCTTAAC
M6402_1.02 9 TGTAACTGT
M6406_1.02 18 GTTCAGTCATGCGTGACA
M6410_1.02 11 TCAAGCGTGAA
M6411_1.02 14 GTCACTGAAGCGGG
M6412_1.02 15 CCCATCAATCAAATT
M6413_1.02 15 CCATCAATCAATTTA
M6415_1.02 9 CTAATTACC
M6416_1.02 11 TCTGTGGTTTG
M6417_1.02 13 ATATATTCATGAG
M6418_1.02 10 TTTAATCCCA
M6419_1.02 13 CATCAATCAAGCT
M6420_1.02 17 GGGGGCATCAGGAGGGG
M6422_1.02 10 CGGGGGGCCC
M6423_1.02 9 ATTTGCATA
M6425_1.02 14 TTTGCATTACAATG
M6426_1.02 10 CATAAATAAT
M6427_1.02 13 CAGCTCATTAATA
M6429_1.02 13 CATAATTTATGCA
M6430_1.02 7 TGACCTT
M6432_1.02 14 TGACCTTTGTCCTA
M6433_1.02 18 GTGACCTTTGACCTACTT
M6436_1.02 13 TACAGACTGTTCT
M6438_1.02 15 GAGTAATTAATATAA
M6439_1.02 7 TAATCTG
M6440_1.02 7 TTAATTG
M6441_1.02 21 GGACAGCTGTTCTGTTTCCTG
M6442_1.02 17 CCCTGCCCCCCCCTTCC
M6443_1.02 7 TGACCTC
M6445_1.02 11 GCCCTGACCTC
M6446_1.02 20 GTGACCTCTGGGTGACCCCC
M6448_1.02 12 GGGGGATTTCCC
M6449_1.02 12 TGGGGATTTCCC
M6451_1.02 12 GTTGCTAGGGAA
M6453_1.02 14 TTACCATGGCAACC
M6454_1.02 12 TGACCTAGTTTT
M6455_1.02 13 CTGACCTACTTTT
M6456_1.02 22 GGGGGGGGGGGTGGTTTGGGGT
M6457_1.02 10 TAACCACAAA
M6459_1.02 14 AACCACAAAACCCA
M6461_1.02 10 TGTGACCTCA
M6462_1.02 13 GTGACCTTTGACC
M6463_1.02 12 AGCCTGTCTGCC
M6464_1.02 11 GTGTCCGTCTG
M6465_1.02 10 GTGTCTGGCC
M6466_1.02 9 TGTCTGGCC
M6468_1.02 8 CCAGGTGG
M6469_1.02 7 TCAGGTG
M6470_1.02 7 TCTTTGT
M6471_1.02 8 CATTGTTC
M6472_1.02 7 CATTGTT
M6473_1.02 18 CAACAATCTTCATTGTCC
M6474_1.02 19 GGAAAAGAACAATGGGTTC
M6475_1.02 16 ATTTGCATAACAATGG
M6476_1.02 12 GAGAACAAAGCG
M6477_1.02 8 TAACAATA
M6478_1.02 11 AGAACAATGGG
M6482_1.02 20 GGGGGGGGGCGGGGCCGGGG
M6483_1.02 24 GGGGCCAGGGGGGGGGCGGGGCCG
M6485_1.02 12 AAAAAGAGGAAG
M6486_1.02 16 CGGCTGTTACCCTGGG
M6490_1.02 9 AAAACAAAA
M6491_1.02 12 TTTCCAGGAATT
M6492_1.02 13 TTTTCTGGGAATT
M6496_1.02 13 TTTCCCAGAAAAG
M6497_1.02 13 TTCCCAGGAATTT
M6498_1.02 9 TGACCTTGA
M6499_1.02 9 CGTGGGAAA
M6500_1.02 12 GACCATCTGTTC
M6503_1.02 25 GTCGCTTTTCACACCTCTGATGGCA
M6504_1.02 24 AGGTAGAGAATTAGGTGATAAAAA
M6505_1.02 8 AGGTGTGA
M6506_1.02 12 GCGCTTTGTTCT
M6507_1.02 14 CACATTCCTGCGCC
M6508_1.02 15 GATATTTCTGCTCTA
M6509_1.02 12 AAAAATAGCTCT
M6510_1.02 14 TGTTTATGTAAATG
M6513_1.02 11 GCCAGCTGCGG
M6514_1.02 16 GCCTGAACTGGCCAGA
M6515_1.02 14 AAATGGCGGGAAAC
M6516_1.02 11 GACCATCTGGT
M6517_1.02 10 GGTCATGTGG
M6518_1.02 9 GGTCACGTG
M6519_1.02 16 CAGGTGACACCTGACA
M6521_1.02 10 CTGACCTGAA
M6523_1.02 17 TGACCTGACCTGACCTC
M6525_1.02 11 CGCCAAGGAGC
M6527_1.02 10 ACCCAGGTGG
M6529_1.02 7 TTTCTGG
M6532_1.02 7 TGACCTC
M6534_1.02 11 TTAGCTAATTA
M6535_1.02 13 GCGGGGGCGGGGG
M6536_1.02 12 GACGTGTCATTA
M6537_1.02 11 GGGGATTGGCC
M6539_1.02 22 CGGAGAGGGGGAGGGGGGGGGC
M6540_1.02 15 CAATAGCGGTGGTGG
M6542_1.02 13 AGATGATAGAGCC
M6544_1.02 12 GGGGATTTCCCA
M6545_1.02 14 GGTAGGGAAACCCC
M6546_1.02 11 ATTAATAATTA
M6547_1.02 19 GAGGGCCCCAGGCCTCGGC
M6548_1.02 9 GGGGTGGTC
M6549_1.02 9 GGGGTGGTC
M6550_1.02 9 TGGGTGGTC
M6552_1.02 15 GGGGTGGGGGAGGGG
M6553_1.02 12 GAGGGGGGCGGA
M6554_1.02 14 TCCAGATGTTTCGG
M6555_1.02 9 CGATAATGA
M6556_1.02 24 GGGCAACAAATCCCTGCGCCCCGT
M6557_1.02 12 GGAAAAAATCGG
M6558_1.02 15 GCACCCTTGGGTGCC
M6559_1.02 16 CCCACGGTTACTGCCG

Random model letter frequencies (/srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/PRDM4.IDR0.05.filt.narrowPeak.top3000.summitPlusMinus250bp.MemeChipResultsDefaultMax/background):
A 0.267 C 0.233 G 0.233 T 0.267


SECTION I: HIGH-SCORING MOTIF OCCURENCES

Motif ID Alt ID Sequence Name Strand Start End p-value q-value Matched Sequence
M5555_1.02 HOXD11 chr10 - 34320373 34320382 2.44e-06 0.748 GTCGTAAAAT
M5555_1.02 HOXD11 chr7 + 25314998 25315007 3.51e-06 0.748 gtcgtaaaac
M5555_1.02 HOXD11 chr17 - 48590368 48590377 4.9e-06 0.748 ATCGTAAAAA
M5555_1.02 HOXD11 chr1 - 53730019 53730028 4.9e-06 0.748 ATCGTAAAAA
M5555_1.02 HOXD11 chr15 - 58361424 58361433 4.9e-06 0.748 ATCGTAAAAA
M5555_1.02 HOXD11 chr4 + 119730487 119730496 4.9e-06 0.748 ATCGTAAAAA
M5555_1.02 HOXD11 chr2 - 177038920 177038929 4.9e-06 0.748 ATCGTAAAAA
M5555_1.02 HOXD11 chr7 - 27140340 27140349 6.3e-06 0.748 ATCGTAAAAT
M5555_1.02 HOXD11 chr12 - 54033668 54033677 6.3e-06 0.748 ATCGTAAAAT
M5555_1.02 HOXD11 chr10 + 479141 479150 7.52e-06 0.748 ATCGTAAAAC
M5555_1.02 HOXD11 chr12 + 39780985 39780994 7.52e-06 0.748 ATCGTAAAAC
M5555_1.02 HOXD11 chr18 + 45590427 45590436 7.52e-06 0.748 atcgtaaaac
M5555_1.02 HOXD11 chr16 - 51557106 51557115 7.52e-06 0.748 ATCGTAAAAC
M5555_1.02 HOXD11 chr13 - 106096826 106096835 7.52e-06 0.748 ATCGTAAAAC
M5555_1.02 HOXD11 chr4 + 112910465 112910474 7.52e-06 0.748 ATCGTAAAAC
M5555_1.02 HOXD11 chr10 + 4653317 4653326 8.59e-06 0.748 GTCGTAAAAG
M5555_1.02 HOXD11 chr6 + 47722311 47722320 8.59e-06 0.748 GTCGTAAAAG
M5555_1.02 HOXD11 chr15 + 55741041 55741050 8.59e-06 0.748 GTCGTAAAAG
M5555_1.02 HOXD11 chr1 - 67827833 67827842 8.59e-06 0.748 GTCGTAAAAG
M5555_1.02 HOXD11 chr1 + 119327643 119327652 8.59e-06 0.748 GTCGTAAAAG
M5555_1.02 HOXD11 chr16 + 67678835 67678844 1.1e-05 0.748 GTCGTAAATA
M5555_1.02 HOXD11 chr12 + 806528 806537 1.24e-05 0.748 GTCATAAAAA
M5555_1.02 HOXD11 chr16 + 11079279 11079288 1.24e-05 0.748 GTCATAAAAA
M5555_1.02 HOXD11 chr3 + 22734315 22734324 1.24e-05 0.748 GTCATAAAAA
M5555_1.02 HOXD11 chr22 + 24579263 24579272 1.24e-05 0.748 gtcataaaaa
M5555_1.02 HOXD11 chr10 - 33388438 33388447 1.24e-05 0.748 GTCATAAAAA
M5555_1.02 HOXD11 chr1 - 44267520 44267529 1.24e-05 0.748 GTCATAAAAA
M5555_1.02 HOXD11 chr6 - 45416855 45416864 1.24e-05 0.748 GTCATAAAAA
M5555_1.02 HOXD11 chr14 - 52399285 52399294 1.24e-05 0.748 GTCATAAAAA
M5555_1.02 HOXD11 chr12 - 66898734 66898743 1.24e-05 0.748 GTCATAAAAA
M5555_1.02 HOXD11 chr10 - 86838135 86838144 1.24e-05 0.748 GTCATAAAAA
M5555_1.02 HOXD11 chr1 + 174692513 174692522 1.24e-05 0.748 GTCATAAAAA
M5555_1.02 HOXD11 chr3 + 182739615 182739624 1.24e-05 0.748 GTCATAAAAA
M5555_1.02 HOXD11 chr12 - 54033737 54033746 1.49e-05 0.748 GTCGTAAATT
M5555_1.02 HOXD11 chr6 - 158287326 158287335 1.49e-05 0.748 GTCGTAAATT
M5555_1.02 HOXD11 chr1 + 25447335 25447344 1.61e-05 0.748 ctcgtaaaaa
M5555_1.02 HOXD11 chr22 - 31055602 31055611 1.61e-05 0.748 CTCGTAAAAA
M5555_1.02 HOXD11 chr17 + 43671307 43671316 1.61e-05 0.748 ctCGTAAAAA
M5555_1.02 HOXD11 chr10 - 52056502 52056511 1.61e-05 0.748 CTCGTAAAAA
M5555_1.02 HOXD11 chr1 - 100351964 100351973 1.61e-05 0.748 CTCGTAAAAA
M5555_1.02 HOXD11 chr3 + 61895050 61895059 1.72e-05 0.748 gtcgttaaac
M5555_1.02 HOXD11 chr16 - 84754387 84754396 1.72e-05 0.748 GTCGTTAAAC
M5555_1.02 HOXD11 chr15 + 96053374 96053383 1.72e-05 0.748 GTCGTTAAAC
M5555_1.02 HOXD11 chr5 - 98771693 98771702 1.72e-05 0.748 GTCGTTAAAC
M5555_1.02 HOXD11 chr11 + 11463599 11463608 1.82e-05 0.748 GTCGTAAATC
M5555_1.02 HOXD11 chr6 - 12249800 12249809 1.82e-05 0.748 GTCGTAAATC
M5555_1.02 HOXD11 chr1 - 18288994 18289003 1.82e-05 0.748 GTCGTAAATC
M5555_1.02 HOXD11 chr2 - 9910927 9910936 1.96e-05 0.748 GTCATAAAAT
M5555_1.02 HOXD11 chr17 + 14622955 14622964 1.96e-05 0.748 GTCATAAAAT
M5555_1.02 HOXD11 chr8 - 25998635 25998644 1.96e-05 0.748 GTCATAAAAT
M5555_1.02 HOXD11 chr3 + 77191973 77191982 1.96e-05 0.748 GTCATAAAAT
M5555_1.02 HOXD11 chr5 + 77958504 77958513 1.96e-05 0.748 GTCATAAAAT
M5555_1.02 HOXD11 chr5 + 125485382 125485391 1.96e-05 0.748 GTCATAAAAT
M5555_1.02 HOXD11 chr2 - 143261286 143261295 1.96e-05 0.748 GTCATAAAAT
M5555_1.02 HOXD11 chr1 - 160261198 160261207 1.96e-05 0.748 GTCATAAAAT
M5555_1.02 HOXD11 chr1 + 162697319 162697328 1.96e-05 0.748 GTCATAAAAT
M5555_1.02 HOXD11 chr6 - 13712454 13712463 2.08e-05 0.748 CTCGTAAAAT
M5555_1.02 HOXD11 chr4 + 87307185 87307194 2.08e-05 0.748 CTCGTAAAAT
M5555_1.02 HOXD11 chr11 + 32891109 32891118 2.21e-05 0.748 gtcataaaac
M5555_1.02 HOXD11 chr1 - 43666843 43666852 2.21e-05 0.748 GTCATAAAAC
M5555_1.02 HOXD11 chr14 + 60659463 60659472 2.21e-05 0.748 GTCATAAAAC
M5555_1.02 HOXD11 chr14 + 91285035 91285044 2.21e-05 0.748 GTCATAAAAC
M5555_1.02 HOXD11 chr14 + 91285054 91285063 2.21e-05 0.748 GTCATAAAAC
M5555_1.02 HOXD11 chr11 - 92839128 92839137 2.21e-05 0.748 GTCATAAAAC
M5555_1.02 HOXD11 chr10 + 118922408 118922417 2.21e-05 0.748 gtcataaaac
M5555_1.02 HOXD11 chr2 + 143705631 143705640 2.21e-05 0.748 GTCATAAAAC
M5555_1.02 HOXD11 chr5 + 169161637 169161646 2.21e-05 0.748 GTCATAAAAC
M5555_1.02 HOXD11 chr1 - 184930828 184930837 2.21e-05 0.748 GTCATAAAAC
M5555_1.02 HOXD11 chr2 - 19667724 19667733 2.31e-05 0.748 CTCGTAAAAC
M5555_1.02 HOXD11 chr12 + 54033692 54033701 2.31e-05 0.748 CTCGTAAAAC
M5555_1.02 HOXD11 chr14 + 69880275 69880284 2.31e-05 0.748 CTCGTAAAAC
M5555_1.02 HOXD11 chr7 + 104884033 104884042 2.31e-05 0.748 CTCGTAAAAC
M5555_1.02 HOXD11 chr10 + 129606067 129606076 2.31e-05 0.748 CTCGTAAAAC
M5555_1.02 HOXD11 chr7 + 157358562 157358571 2.31e-05 0.748 CTCGTAAAAC
M5555_1.02 HOXD11 chr6 + 18262986 18262995 2.42e-05 0.748 GTCGTAAACA
M5555_1.02 HOXD11 chr20 + 25227579 25227588 2.54e-05 0.748 ATCGTAAAAG
M5555_1.02 HOXD11 chr8 + 99324124 99324133 2.68e-05 0.748 ATCGTTAAAA
M5555_1.02 HOXD11 chr10 - 14691531 14691540 2.79e-05 0.748 GTCGTAAAGA
M5555_1.02 HOXD11 chr5 - 90830211 90830220 2.79e-05 0.748 GTCGTAAAGA
M5555_1.02 HOXD11 chr10 + 918207 918216 3.19e-05 0.748 ATCAtaaaaa
M5555_1.02 HOXD11 chr17 - 2729007 2729016 3.19e-05 0.748 ATCATAAAAA
M5555_1.02 HOXD11 chr18 - 6775960 6775969 3.19e-05 0.748 ATCATAAAAA
M5555_1.02 HOXD11 chr19 + 10662464 10662473 3.19e-05 0.748 ATCATAAAAA
M5555_1.02 HOXD11 chr19 - 18365355 18365364 3.19e-05 0.748 ATCATAAAAA
M5555_1.02 HOXD11 chr8 + 37302632 37302641 3.19e-05 0.748 ATCATAAAAA
M5555_1.02 HOXD11 chr12 - 54011454 54011463 3.19e-05 0.748 GTCGTAAACT
M5555_1.02 HOXD11 chr8 + 71711771 71711780 3.19e-05 0.748 ATCATAAAAA
M5555_1.02 HOXD11 chr4 + 72444333 72444342 3.19e-05 0.748 ATCATAAAAA
M5555_1.02 HOXD11 chr6 + 89978325 89978334 3.19e-05 0.748 ATCATAAAAA
M5555_1.02 HOXD11 chr6 + 100593344 100593353 3.19e-05 0.748 ATCATAAAAA
M5555_1.02 HOXD11 chr10 + 110916514 110916523 3.19e-05 0.748 ATCATaaaaa
M5555_1.02 HOXD11 chrX + 154891390 154891399 3.19e-05 0.748 atcataaaaa
M5555_1.02 HOXD11 chr1 + 200400175 200400184 3.19e-05 0.748 ATCATAAAAA
M5555_1.02 HOXD11 chr2 + 212384165 212384174 3.19e-05 0.748 ATCATAAAAA
M5555_1.02 HOXD11 chr1 + 10511065 10511074 3.33e-05 0.748 ATCGTTAAAT
M5555_1.02 HOXD11 chr13 - 99616341 99616350 3.33e-05 0.748 ATCGTTAAAT
M5555_1.02 HOXD11 chr17 - 42132819 42132828 3.89e-05 0.748 GTCGTAAAGC
M5555_1.02 HOXD11 chr9 - 85430844 85430853 4.12e-05 0.748 ATCGTAAATC
M5555_1.02 HOXD11 chr18 + 44680973 44680982 4.34e-05 0.748 GTCGTTAATA
M5555_1.02 HOXD11 chr14 + 92748049 92748058 4.34e-05 0.748 GTCGTTAATA
M5555_1.02 HOXD11 chr10 - 33388611 33388620 4.5e-05 0.748 ATCATAAAAT
M5555_1.02 HOXD11 chr6 - 38975180 38975189 4.5e-05 0.748 ATCATAAAAT
M5555_1.02 HOXD11 chr1 - 47690538 47690547 4.5e-05 0.748 ATCATAAAAT
M5555_1.02 HOXD11 chr4 - 70592383 70592392 4.5e-05 0.748 ATCATAAAAT
M5555_1.02 HOXD11 chr5 - 107533995 107534004 4.5e-05 0.748 ATCATAAAAT
M5555_1.02 HOXD11 chr10 - 126233868 126233877 4.5e-05 0.748 ATCATAAAAT
M5555_1.02 HOXD11 chr7 - 139362350 139362359 4.5e-05 0.748 ATCATAAAAT
M5555_1.02 HOXD11 chr3 + 17730645 17730654 4.5e-05 0.748 atcataaaat
M5555_1.02 HOXD11 chr10 + 35821879 35821888 4.5e-05 0.748 ATCATAAAAT
M5555_1.02 HOXD11 chr2 + 149148438 149148447 4.5e-05 0.748 ATCATAAAAT
M5555_1.02 HOXD11 chr5 - 17306216 17306225 4.64e-05 0.748 GTTGTAAAAA
M5555_1.02 HOXD11 chr12 - 39036153 39036162 4.64e-05 0.748 GTTGTAAAAA
M5555_1.02 HOXD11 chr18 - 65906736 65906745 4.64e-05 0.748 GTTGTAAAAA
M5555_1.02 HOXD11 chr1 - 151980394 151980403 4.64e-05 0.748 GTTGTAAAAA
M5555_1.02 HOXD11 chr1 + 11178416 11178425 4.64e-05 0.748 GTTGTAAAAA
M5555_1.02 HOXD11 chr13 + 48975309 48975318 4.64e-05 0.748 GTTGTAAAAA
M5555_1.02 HOXD11 chr6 + 111922828 111922837 4.64e-05 0.748 GTTGTAAAAA
M5555_1.02 HOXD11 chr6 + 150753780 150753789 4.64e-05 0.748 GTTGTAAAAA
M5555_1.02 HOXD11 chr1 - 15200725 15200734 4.78e-05 0.748 ATCATAAAAC
M5555_1.02 HOXD11 chr9 - 23731709 23731718 4.78e-05 0.748 ATCATAAAAC
M5555_1.02 HOXD11 chr10 - 33485222 33485231 4.78e-05 0.748 ATCATAAAAC
M5555_1.02 HOXD11 chr22 + 24579154 24579163 4.78e-05 0.748 atcataaaac
M5555_1.02 HOXD11 chr7 + 92534644 92534653 4.78e-05 0.748 ATCATAAAAC
M5555_1.02 HOXD11 chr1 + 93960952 93960961 4.78e-05 0.748 ATCATAAAAC
M5555_1.02 HOXD11 chr9 + 95721321 95721330 4.78e-05 0.748 ATCATAAAAC
M5555_1.02 HOXD11 chr1 + 118486406 118486415 4.78e-05 0.748 ATCATAAAAC
M5555_1.02 HOXD11 chr1 + 184930850 184930859 4.78e-05 0.748 ATCATAAAAC
M5555_1.02 HOXD11 chr6 - 11270498 11270507 4.91e-05 0.748 GTCATAAAAG
M5555_1.02 HOXD11 chr5 - 14443837 14443846 4.91e-05 0.748 GTCATAAAAG
M5555_1.02 HOXD11 chr1 - 17597284 17597293 4.91e-05 0.748 GTCATAAAAG
M5555_1.02 HOXD11 chr7 - 27606267 27606276 4.91e-05 0.748 GTCATAAAAG
M5555_1.02 HOXD11 chr17 - 68510463 68510472 4.91e-05 0.748 GTCATAAAAG
M5555_1.02 HOXD11 chr15 - 96694103 96694112 4.91e-05 0.748 GTCATAAAAG
M5555_1.02 HOXD11 chr5 - 115702305 115702314 4.91e-05 0.748 GTCATAAAAG
M5555_1.02 HOXD11 chr6 - 123841547 123841556 4.91e-05 0.748 GTCATAAAAG
M5555_1.02 HOXD11 chr3 + 4320640 4320649 4.91e-05 0.748 gtcataaaag
M5555_1.02 HOXD11 chr18 + 23133859 23133868 4.91e-05 0.748 GTCATAAAAG
M5555_1.02 HOXD11 chr10 + 29276855 29276864 4.91e-05 0.748 GTCATAAAAG
M5555_1.02 HOXD11 chr6 + 47722472 47722481 4.91e-05 0.748 GTCATAAAAG
M5555_1.02 HOXD11 chr1 + 58922615 58922624 4.91e-05 0.748 GTCATAAAAG
M5555_1.02 HOXD11 chr6 + 107217379 107217388 4.91e-05 0.748 gtcataaaag
M5555_1.02 HOXD11 chr2 + 149148323 149148332 4.91e-05 0.748 gtcataaaag
M5555_1.02 HOXD11 chr20 - 3406422 3406431 5.05e-05 0.748 GTCATTAAAA
M5555_1.02 HOXD11 chr18 - 22493509 22493518 5.05e-05 0.748 GTCATTAAAA
M5555_1.02 HOXD11 chr17 - 82367818 82367827 5.05e-05 0.748 GTCATTAAAA
M5555_1.02 HOXD11 chr5 - 82406739 82406748 5.05e-05 0.748 GTCATTAAAA
M5555_1.02 HOXD11 chr12 - 116122763 116122772 5.05e-05 0.748 GTCATTAAAA
M5555_1.02 HOXD11 chr3 - 156161378 156161387 5.05e-05 0.748 GTCATTAAAA
M5555_1.02 HOXD11 chr2 - 175807281 175807290 5.05e-05 0.748 GTCATTAAAA
M5555_1.02 HOXD11 chr10 + 35312985 35312994 5.05e-05 0.748 gtcattaaaa
M5555_1.02 HOXD11 chr10 + 36725979 36725988 5.05e-05 0.748 GTCATTAAAA
M5555_1.02 HOXD11 chr14 + 51653462 51653471 5.05e-05 0.748 GTCATTAAAA
M5555_1.02 HOXD11 chr15 + 70013836 70013845 5.05e-05 0.748 GTCATTAAAA
M5555_1.02 HOXD11 chr10 + 85643053 85643062 5.05e-05 0.748 GTCATTAAAA
M5555_1.02 HOXD11 chr10 + 87846294 87846303 5.05e-05 0.748 GTCATTAAAA
M5555_1.02 HOXD11 chr8 + 108689816 108689825 5.05e-05 0.748 GTCATTAAAA
M5555_1.02 HOXD11 chr13 + 113493472 113493481 5.05e-05 0.748 GTCATTAAAA
M5555_1.02 HOXD11 chrX + 136047096 136047105 5.05e-05 0.748 GTCATTAAAA
M5555_1.02 HOXD11 chr10 - 33388278 33388287 5.19e-05 0.748 GTCATAAATA
M5555_1.02 HOXD11 chr8 - 37479593 37479602 5.19e-05 0.748 GTCATAAATA
M5555_1.02 HOXD11 chr5 - 77996295 77996304 5.19e-05 0.748 GTCATAAATA
M5555_1.02 HOXD11 chr4 - 111883913 111883922 5.19e-05 0.748 GTCATAAATA
M5555_1.02 HOXD11 chr4 - 113112595 113112604 5.19e-05 0.748 GTCATAAATA
M5555_1.02 HOXD11 chr2 - 176931984 176931993 5.19e-05 0.748 GTCATAAATA
M5555_1.02 HOXD11 chr14 + 99259011 99259020 5.19e-05 0.748 GTCATAAATA
M5555_1.02 HOXD11 chr1 + 175841927 175841936 5.19e-05 0.748 GTCATAAATA
M5555_1.02 HOXD11 chr4 - 20294631 20294640 5.41e-05 0.748 CTCGTAAAAG
M5555_1.02 HOXD11 chr6 - 33345373 33345382 5.41e-05 0.748 CTCGTAAAAG
M5555_1.02 HOXD11 chr9 - 36928787 36928796 5.41e-05 0.748 CTCGTAAAAG
M5555_1.02 HOXD11 chr7 - 98476909 98476918 5.41e-05 0.748 CTCGTAAAAG
M5555_1.02 HOXD11 chr5 + 168086372 168086381 5.41e-05 0.748 CTCGTAAAAG
M5555_1.02 HOXD11 chr7 - 117871626 117871635 5.66e-05 0.748 ATCGTAAACA
M5555_1.02 HOXD11 chr4 + 118330052 118330061 5.66e-05 0.748 ATCGTAAACA
M5555_1.02 HOXD11 chr21 - 33137231 33137240 5.92e-05 0.748 GTTGTAAAAT
M5555_1.02 HOXD11 chr5 - 38783428 38783437 5.92e-05 0.748 GTTGTAAAAT
M5555_1.02 HOXD11 chr19 - 38974936 38974945 5.92e-05 0.748 GTTGTAAAAT
M5555_1.02 HOXD11 chr17 - 71176957 71176966 5.92e-05 0.748 GTTGTAAAAT
M5555_1.02 HOXD11 chr5 - 98771627 98771636 5.92e-05 0.748 GTTGTAAAAT
M5555_1.02 HOXD11 chr4 - 106587858 106587867 5.92e-05 0.748 GTTGTAAAAT
M5555_1.02 HOXD11 chr6 - 112232030 112232039 5.92e-05 0.748 GTTGTAAAAT
M5555_1.02 HOXD11 chr9 - 130287899 130287908 5.92e-05 0.748 CTCGTAAATA
M5555_1.02 HOXD11 chr7 + 1198414 1198423 5.92e-05 0.748 GTTGTAAAAT
M5555_1.02 HOXD11 chr17 + 20937008 20937017 5.92e-05 0.748 GTTGTAAAAT
M5555_1.02 HOXD11 chr11 + 33258679 33258688 5.92e-05 0.748 GTTGTAAAAT
M5555_1.02 HOXD11 chr18 + 36512269 36512278 5.92e-05 0.748 GTTGTAAAAT
M5555_1.02 HOXD11 chr13 + 40589524 40589533 5.92e-05 0.748 GTTGTAAAAT
M5555_1.02 HOXD11 chr14 + 96979806 96979815 5.92e-05 0.748 GTTGTAAAAT
M5555_1.02 HOXD11 chr2 + 127220760 127220769 5.92e-05 0.748 GTTGTAAAAT
M5555_1.02 HOXD11 chr4 + 147768333 147768342 5.92e-05 0.748 GTTGTAAAAT
M5555_1.02 HOXD11 chr1 - 154527551 154527560 6.04e-05 0.748 ATCGTAAAGA
M5555_1.02 HOXD11 chr2 - 58634911 58634920 6.18e-05 0.748 GTAGTAAAAA
M5555_1.02 HOXD11 chr6 + 1369286 1369295 6.18e-05 0.748 GTAGTAAAAA
M5555_1.02 HOXD11 chr6 + 21201652 21201661 6.18e-05 0.748 GTAGTAAAAA
M5555_1.02 HOXD11 chr1 + 66778712 66778721 6.18e-05 0.748 GTAGTAAAAA
M5555_1.02 HOXD11 chr10 + 125063580 125063589 6.18e-05 0.748 GTAGTAAAAA
M5555_1.02 HOXD11 chr9 + 125894946 125894955 6.18e-05 0.748 GTAGTAAAAA
M5555_1.02 HOXD11 chr10 - 4653351 4653360 6.55e-05 0.748 GTTGTAAAAC
M5555_1.02 HOXD11 chr6 - 7692526 7692535 6.55e-05 0.748 GTTGTAAAAC
M5555_1.02 HOXD11 chr9 - 18822356 18822365 6.55e-05 0.748 GTTGTAAAAC
M5555_1.02 HOXD11 chr16 - 19102539 19102548 6.55e-05 0.748 GTCATTAAAT
M5555_1.02 HOXD11 chr3 - 23482029 23482038 6.55e-05 0.748 GTTGTAAAAC
M5555_1.02 HOXD11 chr18 - 25345740 25345749 6.55e-05 0.748 GTCATTAAAT
M5555_1.02 HOXD11 chr10 - 36424583 36424592 6.55e-05 0.748 GTTGTAAAAC
M5555_1.02 HOXD11 chr15 - 36970739 36970748 6.55e-05 0.748 GTCATTAAAT
M5555_1.02 HOXD11 chr20 - 45158301 45158310 6.55e-05 0.748 GTTGTAAAAC
M5555_1.02 HOXD11 chr16 - 54654916 54654925 6.55e-05 0.748 GTCATTAAAT
M5555_1.02 HOXD11 chr5 - 77087408 77087417 6.55e-05 0.748 GTTGTAAAAC
M5555_1.02 HOXD11 chr6 - 107217392 107217401 6.55e-05 0.748 GTCATTAAAT
M5555_1.02 HOXD11 chr12 - 116719243 116719252 6.55e-05 0.748 GTCATTAAAT
M5555_1.02 HOXD11 chr12 - 116719243 116719252 6.55e-05 0.748 GTCATTAAAT
M5555_1.02 HOXD11 chr3 - 136817547 136817556 6.55e-05 0.748 GTCATTAAAT
M5555_1.02 HOXD11 chr9 - 137632767 137632776 6.55e-05 0.748 GTCATTAAAT
M5555_1.02 HOXD11 chr3 + 11477018 11477027 6.55e-05 0.748 GTCATTAAAT
M5555_1.02 HOXD11 chr19 + 30004514 30004523 6.55e-05 0.748 GTTGTAAAAC
M5555_1.02 HOXD11 chr11 + 32891777 32891786 6.55e-05 0.748 GTCAttaaat
M5555_1.02 HOXD11 chr11 + 32891924 32891933 6.55e-05 0.748 GTCATTAAAT
M5555_1.02 HOXD11 chr18 + 65906874 65906883 6.55e-05 0.748 gttgtaaaac
M5555_1.02 HOXD11 chr14 + 103558828 103558837 6.55e-05 0.748 GTTGTAAAAC
M5555_1.02 HOXD11 chr12 + 121989859 121989868 6.55e-05 0.748 GTTGTAAAAC
M5555_1.02 HOXD11 chr6 + 168034977 168034986 6.55e-05 0.748 GTCATTAAAT
M5555_1.02 HOXD11 chr1 + 182175586 182175595 6.55e-05 0.748 gttgtaaaac
M5555_1.02 HOXD11 chr21 - 37371007 37371016 6.69e-05 0.748 GTCATAAATT
M5555_1.02 HOXD11 chr2 - 37376847 37376856 6.69e-05 0.748 GTCATAAATT
M5555_1.02 HOXD11 chr1 - 44238127 44238136 6.69e-05 0.748 GTCATAAATT
M5555_1.02 HOXD11 chr1 - 61091666 61091675 6.69e-05 0.748 GTCATAAATT
M5555_1.02 HOXD11 chr9 - 70746955 70746964 6.69e-05 0.748 GTCATAAATT
M5555_1.02 HOXD11 chr10 - 75508836 75508845 6.69e-05 0.748 GTCATAAATT
M5555_1.02 HOXD11 chr1 - 183026458 183026467 6.69e-05 0.748 GTCATAAATT
M5555_1.02 HOXD11 chr9 + 1458743 1458752 6.69e-05 0.748 GTCATAAATT
M5555_1.02 HOXD11 chr6 + 17473705 17473714 6.69e-05 0.748 GTCATAAATT
M5555_1.02 HOXD11 chr3 + 55620877 55620886 6.69e-05 0.748 GTCATAAATT
M5555_1.02 HOXD11 chr9 - 1462815 1462824 6.83e-05 0.748 CTCATAAAAA
M5555_1.02 HOXD11 chr10 - 7302596 7302605 6.83e-05 0.748 CTCATAAAAA
M5555_1.02 HOXD11 chr9 - 13956321 13956330 6.83e-05 0.748 CTCATAAAAA
M5555_1.02 HOXD11 chr6 - 16755015 16755024 6.83e-05 0.748 CTCATAAAAA
M5555_1.02 HOXD11 chr22 - 24038632 24038641 6.83e-05 0.748 CTCATAAAAA
M5555_1.02 HOXD11 chr10 - 35890449 35890458 6.83e-05 0.748 CTCATAAAAA
M5555_1.02 HOXD11 chr12 - 54002138 54002147 6.83e-05 0.748 CTCATAAAAA
M5555_1.02 HOXD11 chr18 - 65906630 65906639 6.83e-05 0.748 CTCATAAAAA
M5555_1.02 HOXD11 chr11 - 79008020 79008029 6.83e-05 0.748 CTCATAAAAA
M5555_1.02 HOXD11 chr12 - 95103406 95103415 6.83e-05 0.748 CTCATAAAAA
M5555_1.02 HOXD11 chr2 - 99882349 99882358 6.83e-05 0.748 CTCATAAAAA
M5555_1.02 HOXD11 chr5 - 102902279 102902288 6.83e-05 0.748 CTCATAAAAA
M5555_1.02 HOXD11 chr1 - 118486422 118486431 6.83e-05 0.748 CTCATAAAAA
M5555_1.02 HOXD11 chr8 - 124077637 124077646 6.83e-05 0.748 CTCATAAAAA
M5555_1.02 HOXD11 chr10 - 125633669 125633678 6.83e-05 0.748 CTCATAAAAA
M5555_1.02 HOXD11 chr6 - 165674562 165674571 6.83e-05 0.748 CTCATAAAAA
M5555_1.02 HOXD11 chr1 - 170097761 170097770 6.83e-05 0.748 CTCATAAAAA
M5555_1.02 HOXD11 chr2 - 235677413 235677422 6.83e-05 0.748 CTCATAAAAA
M5555_1.02 HOXD11 chr10 + 14692555 14692564 6.83e-05 0.748 CTCATAAAAA
M5555_1.02 HOXD11 chr6 + 16244855 16244864 6.83e-05 0.748 CTCATAAAAA
M5555_1.02 HOXD11 chr6 + 26029393 26029402 6.83e-05 0.748 ctcataaaaa
M5555_1.02 HOXD11 chr11 + 27202113 27202122 6.83e-05 0.748 ctcataaaaa
M5555_1.02 HOXD11 chr19 + 30341913 30341922 6.83e-05 0.748 CTCATAAAAA
M5555_1.02 HOXD11 chr1 + 31935254 31935263 6.83e-05 0.748 CTCATAAAAA
M5555_1.02 HOXD11 chr17 + 39770195 39770204 6.83e-05 0.748 CTCATAAAAA
M5555_1.02 HOXD11 chr19 + 40921127 40921136 6.83e-05 0.748 CTCATAAAAA
M5555_1.02 HOXD11 chr6 + 43926712 43926721 6.83e-05 0.748 CTCATAAAAA
M5555_1.02 HOXD11 chr18 + 45588397 45588406 6.83e-05 0.748 CTCATAAAAA
M5555_1.02 HOXD11 chr6 + 47722656 47722665 6.83e-05 0.748 CTCATAAAAA
M5555_1.02 HOXD11 chr10 + 60526483 60526492 6.83e-05 0.748 CTCATAAAAA
M5555_1.02 HOXD11 chr10 + 62038536 62038545 6.83e-05 0.748 CTCATAAAAA
M5555_1.02 HOXD11 chr12 + 65965634 65965643 6.83e-05 0.748 CTCATAAAAA
M5555_1.02 HOXD11 chr14 + 68140544 68140553 6.83e-05 0.748 CTCATAAAAA
M5555_1.02 HOXD11 chr7 + 70098145 70098154 6.83e-05 0.748 CTCATAAAAA
M5555_1.02 HOXD11 chr5 + 94469960 94469969 6.83e-05 0.748 CTCATAAAAA
M5555_1.02 HOXD11 chr10 + 121819391 121819400 6.83e-05 0.748 CTCATAAAAA
M5555_1.02 HOXD11 chr2 + 139370138 139370147 6.83e-05 0.748 CTCATAAAAA
M5555_1.02 HOXD11 chr1 + 200400100 200400109 6.83e-05 0.748 CTCATAAAAA
M5555_1.02 HOXD11 chr5 - 90297191 90297200 6.95e-05 0.754 CTCGTTAAAT
M5555_1.02 HOXD11 chr16 + 86363384 86363393 6.95e-05 0.754 ctcgttaaat
M5555_1.02 HOXD11 chr3 - 16483319 16483328 7.07e-05 0.754 ATCGTAAACT
M5555_1.02 HOXD11 chr3 - 69250197 69250206 7.07e-05 0.754 ATCGTAAACT
M5555_1.02 HOXD11 chr15 + 36970758 36970767 7.07e-05 0.754 ATCGTAAACT
M5555_1.02 HOXD11 chr7 + 92534824 92534833 7.07e-05 0.754 ATCGTAAACT
M5555_1.02 HOXD11 chr1 + 44238208 44238217 7.19e-05 0.754 CTCGTAAATT
M5555_1.02 HOXD11 chr5 - 17315594 17315603 7.46e-05 0.754 GTAGTAAAAT
M5555_1.02 HOXD11 chr20 - 19111328 19111337 7.46e-05 0.754 GTAGTAAAAT
M5555_1.02 HOXD11 chr22 - 36642536 36642545 7.46e-05 0.754 GTAGTAAAAT
M5555_1.02 HOXD11 chr5 - 36919237 36919246 7.46e-05 0.754 GTAGTAAAAT
M5555_1.02 HOXD11 chr9 - 107738217 107738226 7.46e-05 0.754 GTAGTAAAAT
M5555_1.02 HOXD11 chr7 - 133492486 133492495 7.46e-05 0.754 GTAGTAAAAT
M5555_1.02 HOXD11 chr14 + 36905421 36905430 7.46e-05 0.754 GTAGTAAAAT
M5555_1.02 HOXD11 chr2 - 19667910 19667919 7.58e-05 0.754 GTCATTAAAC
M5555_1.02 HOXD11 chr15 - 36925882 36925891 7.58e-05 0.754 GTCATTAAAC
M5555_1.02 HOXD11 chr5 - 72247300 72247309 7.58e-05 0.754 GTCATTAAAC
M5555_1.02 HOXD11 chr10 - 74833663 74833672 7.58e-05 0.754 GTCATTAAAC
M5555_1.02 HOXD11 chr5 - 77995125 77995134 7.58e-05 0.754 GTCATTAAAC
M5555_1.02 HOXD11 chr1 - 87706754 87706763 7.58e-05 0.754 GTCATTAAAC
M5555_1.02 HOXD11 chr4 + 25234652 25234661 7.58e-05 0.754 GTCATTAAAC
M5555_1.02 HOXD11 chr7 - 27115280 27115289 7.7e-05 0.754 GTCATAAATC
M5555_1.02 HOXD11 chr12 - 54052267 54052276 7.7e-05 0.754 GTCATAAATC
M5555_1.02 HOXD11 chr8 - 119919782 119919791 7.7e-05 0.754 GTCATAAATC
M5555_1.02 HOXD11 chr9 - 123687333 123687342 7.7e-05 0.754 GTCATAAATC
M5555_1.02 HOXD11 chr3 - 124429255 124429264 7.7e-05 0.754 GTCATAAATC
M5555_1.02 HOXD11 chr1 + 22506373 22506382 7.7e-05 0.754 GTCATAAATC
M5555_1.02 HOXD11 chr1 + 47690735 47690744 7.7e-05 0.754 GTCATAAATC
M5555_1.02 HOXD11 chr7 + 51607005 51607014 7.7e-05 0.754 gtcataaatc
M5555_1.02 HOXD11 chr11 + 88320249 88320258 7.7e-05 0.754 GTCATAAATC
M5555_1.02 HOXD11 chrX + 72393496 72393505 7.81e-05 0.754 CTCGTTAAAC
M5555_1.02 HOXD11 chr10 - 113048760 113048769 7.91e-05 0.754 ATCGTAAACC
M5555_1.02 HOXD11 chr6 + 11851673 11851682 7.91e-05 0.754 atcgtaaacc
M5555_1.02 HOXD11 chr21 + 45294963 45294972 7.91e-05 0.754 ATCGTAAACC
M5555_1.02 HOXD11 chr12 - 54054507 54054516 8.22e-05 0.754 CTCGTAAATC
M5555_1.02 HOXD11 chr7 + 27129893 27129902 8.22e-05 0.754 CTCGTAAATC
M5555_1.02 HOXD11 chr2 + 36358345 36358354 8.22e-05 0.754 CTCGTAAATC
M5555_1.02 HOXD11 chr12 + 54265621 54265630 8.22e-05 0.754 GTCGTTAACA
M5555_1.02 HOXD11 chr12 + 54359250 54359259 8.22e-05 0.754 CTCGTAAATC
M5555_1.02 HOXD11 chr20 + 61438434 61438443 8.22e-05 0.754 CTCGTAAATC
M5555_1.02 HOXD11 chr10 + 129606322 129606331 8.22e-05 0.754 GTCGTTAACA
M5555_1.02 HOXD11 chr12 + 106768026 106768035 8.34e-05 0.754 GTCGAAAAAA
M5555_1.02 HOXD11 chr14 + 92748120 92748129 8.66e-05 0.754 GTCGTAAAGG
M5555_1.02 HOXD11 chr6 - 1838719 1838728 8.91e-05 0.754 CTCATAAAAT
M5555_1.02 HOXD11 chr9 - 2570771 2570780 8.91e-05 0.754 CTCATAAAAT
M5555_1.02 HOXD11 chr18 - 6775835 6775844 8.91e-05 0.754 CTCATAAAAT
M5555_1.02 HOXD11 chr3 - 11509526 11509535 8.91e-05 0.754 CTCATAAAAT
M5555_1.02 HOXD11 chr20 - 45036211 45036220 8.91e-05 0.754 CTCATAAAAT
M5555_1.02 HOXD11 chr20 - 47789447 47789456 8.91e-05 0.754 CTCATAAAAT
M5555_1.02 HOXD11 chr14 - 61332286 61332295 8.91e-05 0.754 CTCATAAAAT
M5555_1.02 HOXD11 chrX - 72393559 72393568 8.91e-05 0.754 CTCATAAAAT
M5555_1.02 HOXD11 chr7 - 83267263 83267272 8.91e-05 0.754 CTCATAAAAT
M5555_1.02 HOXD11 chr6 - 91299905 91299914 8.91e-05 0.754 CTCATAAAAT
M5555_1.02 HOXD11 chr13 - 106098533 106098542 8.91e-05 0.754 CTCATAAAAT
M5555_1.02 HOXD11 chr6 - 112231947 112231956 8.91e-05 0.754 CTCATAAAAT
M5555_1.02 HOXD11 chr9 - 134224318 134224327 8.91e-05 0.754 CTCATAAAAT
M5555_1.02 HOXD11 chr4 - 156815826 156815835 8.91e-05 0.754 CTCATAAAAT
M5555_1.02 HOXD11 chr12 + 806768 806777 8.91e-05 0.754 CTCATAAAAT
M5555_1.02 HOXD11 chr21 + 15735615 15735624 8.91e-05 0.754 CTCATAAAAT
M5555_1.02 HOXD11 chr9 + 18822687 18822696 8.91e-05 0.754 ctcataaaat
M5555_1.02 HOXD11 chr2 + 19667924 19667933 8.91e-05 0.754 CTCATAAAAT
M5555_1.02 HOXD11 chr18 + 31646600 31646609 8.91e-05 0.754 CTCATAAAAT
M5555_1.02 HOXD11 chr5 + 36502553 36502562 8.91e-05 0.754 CTCATAAAAT
M5555_1.02 HOXD11 chr12 + 43169345 43169354 8.91e-05 0.754 CTCATAAAAT
M5555_1.02 HOXD11 chr15 + 43934722 43934731 8.91e-05 0.754 CTCATAAAAT
M5555_1.02 HOXD11 chr16 + 54569073 54569082 8.91e-05 0.754 CTCATAAAAT
M5555_1.02 HOXD11 chr12 + 65965698 65965707 8.91e-05 0.754 CTCATAAAAT
M5555_1.02 HOXD11 chr6 + 75244185 75244194 8.91e-05 0.754 CTCATAAAAT
M5555_1.02 HOXD11 chr7 + 80760547 80760556 8.91e-05 0.754 CTCATAAAAT
M5555_1.02 HOXD11 chr9 + 87259922 87259931 8.91e-05 0.754 CTCATAAAAT
M5555_1.02 HOXD11 chr1 + 232678740 232678749 8.91e-05 0.754 CTCATAAAAT
M5555_1.02 HOXD11 chr15 - 70763995 70764004 9.03e-05 0.754 GTAGTAAAAC
M5555_1.02 HOXD11 chr5 - 122333405 122333414 9.03e-05 0.754 GTAGTAAAAC
M5555_1.02 HOXD11 chr4 - 124931401 124931410 9.03e-05 0.754 GTAGTAAAAC
M5555_1.02 HOXD11 chr16 + 11757897 11757906 9.03e-05 0.754 GTAGTAAAAC
M5555_1.02 HOXD11 chr20 + 51934415 51934424 9.15e-05 0.754 ATCGTAAATG
M5555_1.02 HOXD11 chrX - 23944331 23944340 9.58e-05 0.754 ATTGTAAAAA
M5555_1.02 HOXD11 chr3 - 71102300 71102309 9.58e-05 0.754 ATTGTAAAAA
M5555_1.02 HOXD11 chr6 - 168024320 168024329 9.58e-05 0.754 ATTGTAAAAA
M5555_1.02 HOXD11 chr5 + 10366383 10366392 9.58e-05 0.754 ATTGTAAAAA
M5555_1.02 HOXD11 chr2 + 11963960 11963969 9.58e-05 0.754 ATTGTAAAAA
M5555_1.02 HOXD11 chr10 + 43380789 43380798 9.58e-05 0.754 attgtaaaaa
M5555_1.02 HOXD11 chr16 + 52552628 52552637 9.58e-05 0.754 ATTGTAAAAA
M5555_1.02 HOXD11 chr5 + 73912066 73912075 9.58e-05 0.754 ATTGTAAAAA
M5555_1.02 HOXD11 chr7 + 116637360 116637369 9.58e-05 0.754 ATTGTAAAAA
M5555_1.02 HOXD11 chr6 - 2839251 2839260 9.7e-05 0.754 CTCATAAAAC
M5555_1.02 HOXD11 chr18 - 22493451 22493460 9.7e-05 0.754 CTCATAAAAC
M5555_1.02 HOXD11 chr10 - 29276731 29276740 9.7e-05 0.754 CTCATAAAAC
M5555_1.02 HOXD11 chr10 - 35890427 35890436 9.7e-05 0.754 CTCATAAAAC
M5555_1.02 HOXD11 chr18 - 50748666 50748675 9.7e-05 0.754 CTCATAAAAC
M5555_1.02 HOXD11 chr15 - 70526732 70526741 9.7e-05 0.754 CTCATAAAAC
M5555_1.02 HOXD11 chr17 - 70969911 70969920 9.7e-05 0.754 CTCATAAAAC
M5555_1.02 HOXD11 chr11 - 95521297 95521306 9.7e-05 0.754 CTCATAAAAC
M5555_1.02 HOXD11 chr14 - 103033957 103033966 9.7e-05 0.754 CTCATAAAAC
M5555_1.02 HOXD11 chr6 - 112231933 112231942 9.7e-05 0.754 CTCATAAAAC
M5555_1.02 HOXD11 chr3 - 167978401 167978410 9.7e-05 0.754 CTCATAAAAC
M5555_1.02 HOXD11 chr1 - 169942803 169942812 9.7e-05 0.754 CTCATAAAAC
M5555_1.02 HOXD11 chr10 + 22553061 22553070 9.7e-05 0.754 CTCATAAAAC
M5555_1.02 HOXD11 chr13 + 28336285 28336294 9.7e-05 0.754 ctcataaaac
M5555_1.02 HOXD11 chr7 + 51606888 51606897 9.7e-05 0.754 ctcataaaac
M5555_1.02 HOXD11 chr15 + 55823308 55823317 9.7e-05 0.754 CTCATAAAAC
M5555_1.02 HOXD11 chr12 + 65606490 65606499 9.7e-05 0.754 CTCATAAAAC
M5555_1.02 HOXD11 chr6 + 79375692 79375701 9.7e-05 0.754 CTCATAAAAC
M5555_1.02 HOXD11 chr8 + 99323953 99323962 9.7e-05 0.754 CTCATAAAAC
M5555_1.02 HOXD11 chr6 + 139708860 139708869 9.7e-05 0.754 CTCATAAAAC
M5555_1.02 HOXD11 chr4 + 174133693 174133702 9.7e-05 0.754 CTCATAAAAC
M5555_1.02 HOXD11 chr5 + 175378641 175378650 9.7e-05 0.754 ctcataaaac
M5555_1.02 HOXD11 chr6 - 16245288 16245297 9.82e-05 0.754 GTCATAAACA
M5555_1.02 HOXD11 chr10 - 72228516 72228525 9.82e-05 0.754 GTCATAAACA
M5555_1.02 HOXD11 chr20 + 4042122 4042131 9.82e-05 0.754 gtcataaaca
M5555_1.02 HOXD11 chr10 - 12980046 12980055 9.96e-05 0.754 ATCATAAAAG
M5555_1.02 HOXD11 chr3 - 17836399 17836408 9.96e-05 0.754 ATCATAAAAG
M5555_1.02 HOXD11 chr13 - 49125148 49125157 9.96e-05 0.754 ATCATAAAAG
M5555_1.02 HOXD11 chr12 - 114914439 114914448 9.96e-05 0.754 ATCATAAAAG
M5555_1.02 HOXD11 chr12 + 12726817 12726826 9.96e-05 0.754 ATCATAAAAG
M5555_1.02 HOXD11 chr1 + 16248904 16248913 9.96e-05 0.754 ATCATAAAAG
M5555_1.02 HOXD11 chr4 + 72444217 72444226 9.96e-05 0.754 ATCATAAAAG
M5555_1.02 HOXD11 chr13 + 106098226 106098235 9.96e-05 0.754 ATCATAAAAG
M5555_1.02 HOXD11 chr5 + 124791300 124791309 9.96e-05 0.754 ATCATAAAAG
M5555_1.02 HOXD11 chr3 + 125512425 125512434 9.96e-05 0.754 ATCATAAAAG

DEBUGGING INFORMATION

Command line:

/software/meme/4.12.0/bin/fimo --parse-genomic-coord --verbosity 1 --oc /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/PRDM4.IDR0.05.filt.narrowPeak.top3000.summitPlusMinus250bp.MemeChipResultsDefaultMax/fimo_out_15 --bgfile /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/PRDM4.IDR0.05.filt.narrowPeak.top3000.summitPlusMinus250bp.MemeChipResultsDefaultMax/background --motif M5555_1.02 /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/MotifData/motif_databases/CIS-BP/Homo_sapiens.meme /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/PRDM4.IDR0.05.filt.narrowPeak.top3000.summitPlusMinus250bp.MemeChipResultsDefaultMax/PRDM4.IDR0.05.filt.narrowPeak.top3000.summitPlusMinus250bp.fa

Settings:

output_directory = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/PRDM4.IDR0.05.filt.narrowPeak.top3000.summitPlusMinus250bp.MemeChipResultsDefaultMax/fimo_out_15 MEME file name = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/MotifData/motif_databases/CIS-BP/Homo_sapiens.meme sequence file name = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/PRDM4.IDR0.05.filt.narrowPeak.top3000.summitPlusMinus250bp.MemeChipResultsDefaultMax/PRDM4.IDR0.05.filt.narrowPeak.top3000.summitPlusMinus250bp.fa
background file name = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/PRDM4.IDR0.05.filt.narrowPeak.top3000.summitPlusMinus250bp.MemeChipResultsDefaultMax/background alphabet = DNA max stored scores = 100000
allow clobber = true compute q-values = true parse genomic coord. = true
text only = false scan both strands = true max strand = false
threshold type = p-value output theshold = 0.0001 pseudocount = 0.1
alpha = 1 verbosity = 1

This information can be useful in the event you wish to report a problem with the FIMO software.


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