# WARNING: this file is not sorted! # db id alt consensus E-value adj_p-value log_adj_p-value bin_location bin_width total_width sites_in_bin total_sites p_success p-value mult_tests 1 DGGGNNMCTWGAAACHGYYW MEME-1 DGGGNNMCTWGAAACHGYYW 2.8e-552 3.7e-555 -1276.62 0.0 97 481 1775 2744 0.20166 1.6e-557 240 2 GAAAC DREME-1 GAAAC 4.2e-194 5.5e-197 -451.90 0.0 86 496 1130 2671 0.17339 2.2e-199 247 2 DTTTATD DREME-2 DTTTATD 1.5e-010 1.9e-013 -29.27 0.0 206 494 1022 2022 0.41700 7.9e-016 246 2 RTGASTCA DREME-3 RTGASTCA 3.6e-013 4.8e-016 -35.27 0.0 245 493 278 388 0.49696 2.0e-018 246 2 RWTTACA DREME-4 RWTTACA 1.6e-001 2.2e-004 -8.44 0.0 114 494 330 1127 0.23077 8.8e-007 246 2 TTATCW DREME-6 TTATCW 1.0e-005 1.4e-008 -18.09 0.0 237 495 815 1445 0.47879 5.7e-011 247 2 ATKACATC DREME-8 ATKACATC 1.9e0000 2.5e-003 -6.01 0.0 167 493 89 179 0.33874 1.0e-005 246 2 AAACAAAC DREME-9 AAACAAAC 2.9e-004 3.9e-007 -14.76 0.0 177 493 139 255 0.35903 1.6e-009 246 2 GCWATTA DREME-10 GCWATTA 2.9e-001 3.9e-004 -7.86 0.0 264 494 234 356 0.53441 1.6e-006 246 3 M0300_1.02 (ATF2)_(Mus_musculus)_(DBD_1.00) NRTKACGTMA 1.8e-001 2.4e-004 -8.36 0.0 165 491 1029 2708 0.33605 9.6e-007 245 3 M0415_1.02 (KLF9)_(Mus_musculus)_(DBD_1.00) VTAACGGN 1.2e0000 1.6e-003 -6.44 0.0 73 493 451 2506 0.14807 6.5e-006 246 3 M0424_1.02 (SNAI3)_(Mus_musculus)_(DBD_0.75) NNTGACAKNN 8.9e-006 1.2e-008 -18.25 0.0 161 491 1142 2970 0.32790 4.8e-011 245 3 M0442_1.02 (ZBTB3)_(Mus_musculus)_(DBD_1.00) NNTGCAGYG 6.0e-003 8.0e-006 -11.74 0.0 244 492 1630 2989 0.49593 3.3e-008 245 3 M0630_1.02 DMRT1 WWTGTWDCNW 1.6e-017 2.1e-020 -45.30 0.0 65 491 559 2813 0.13238 8.6e-023 245 3 M0632_1.02 DMRTA2 WHWGTWDYNN 3.8e-001 5.1e-004 -7.58 0.0 65 491 208 1147 0.13238 2.1e-006 245 3 M0718_1.02 FOXK1 DNRTMAACAH 4.4e-009 5.9e-012 -25.85 0.0 99 491 749 2880 0.20163 2.4e-014 245 3 M0719_1.02 FOXG1 RTAAACAW 1.1e-003 1.5e-006 -13.39 0.0 95 493 616 2586 0.19270 6.2e-009 246 3 M0728_1.02 (FOXJ1)_(Mus_musculus)_(DBD_1.00) NRTAAACAAANN 4.8e-005 6.4e-008 -16.56 0.0 157 489 1069 2839 0.32106 2.6e-010 244 3 M0736_1.02 (FOXK2)_(Mus_musculus)_(DBD_0.90) RTAAACAA 9.5e-002 1.3e-004 -8.98 0.0 97 493 664 2834 0.19675 5.1e-007 246 3 M0737_1.02 (FOXB2)_(Mus_musculus)_(DBD_0.94) WRWGTAAAYA 2.0e-001 2.6e-004 -8.24 0.0 123 491 816 2813 0.25051 1.1e-006 245 3 M0747_1.02 (FOXL2)_(Mus_musculus)_(DBD_0.70) WNNRTAAAYA 1.2e-005 1.6e-008 -17.93 0.0 105 491 758 2868 0.21385 6.6e-011 245 3 M0756_1.02 (FOXN3)_(Strongylocentrotus_purpuratus)_(DBD_0.44) NNHMACANN 2.6e-004 3.5e-007 -14.87 0.0 156 492 958 2571 0.31707 1.4e-009 245 3 M0891_1.02 TLX2 NTAAWNNNNN 1.2e-003 1.6e-006 -13.33 0.0 95 491 139 454 0.19348 6.7e-009 245 3 M0896_1.02 VENTX TTAATTAG 6.8e-001 9.0e-004 -7.01 0.0 113 493 678 2535 0.22921 3.7e-006 246 3 M0897_1.02 HOXB13 DTTWAYDRBN 4.4e-034 5.8e-037 -83.44 0.0 193 491 1435 2781 0.39308 2.4e-039 245 3 M0905_1.02 (HOXA4)_(Mus_musculus)_(DBD_1.00) NTAATKRNN 5.2e-003 6.9e-006 -11.88 0.0 106 492 647 2473 0.21545 2.8e-008 245 3 M0949_1.02 (AC012531.1)_(Mus_musculus)_(DBD_1.00) NTAATDR 7.4e-003 9.9e-006 -11.53 0.0 108 494 602 2256 0.21862 4.0e-008 246 3 M0961_1.02 (BARHL1)_(Mus_musculus)_(DBD_1.00) NTAAWYGNN 9.9e-001 1.3e-003 -6.63 0.0 120 492 785 2802 0.24390 5.4e-006 245 3 M0999_1.02 (NKX6-1)_(Mus_musculus)_(DBD_1.00) NWTAATKRN 6.8e-005 9.0e-008 -16.22 0.0 108 492 725 2682 0.21951 3.7e-010 245 3 M1007_1.02 (HOXA11)_(Mus_musculus)_(DBD_1.00) TTWAYDDBN 2.7e-033 3.6e-036 -81.63 0.0 182 492 569 993 0.36992 1.5e-038 245 3 M1012_1.02 (HOXB4)_(Mus_musculus)_(DBD_1.00) NTAATKRNN 4.7e-002 6.3e-005 -9.67 0.0 106 492 661 2570 0.21545 2.6e-007 245 3 M1025_1.02 (HOXD1)_(Mus_musculus)_(DBD_0.98) NNYVATYA 1.0e0000 1.4e-003 -6.59 0.0 105 493 525 2072 0.21298 5.6e-006 246 3 M1027_1.02 (HOXA6)_(Mus_musculus)_(DBD_1.00) WTAATKRBN 1.2e-008 1.6e-011 -24.83 0.0 208 492 1301 2631 0.42276 6.7e-014 245 3 M1030_1.02 (NKX2-3)_(Mus_musculus)_(DBD_1.00) NVYACTTVD 1.0e-002 1.4e-005 -11.20 0.0 132 492 926 2966 0.26829 5.6e-008 245 3 M1039_1.02 (ENSG00000229544)_(Mus_musculus)_(DBD_1.00) NNTAATDRN 1.2e0000 1.6e-003 -6.46 0.0 136 492 820 2599 0.27642 6.4e-006 245 3 M1070_1.02 (HOXC5)_(Mus_musculus)_(DBD_1.00) NTAATKRNN 2.4e-001 3.2e-004 -8.04 0.0 114 492 683 2510 0.23171 1.3e-006 245 3 M1071_1.02 (HOXD3)_(Mus_musculus)_(DBD_1.00) NTAATKRN 1.4e-002 1.8e-005 -10.92 0.0 109 493 688 2597 0.22110 7.3e-008 246 3 M1073_1.02 (HOXA3)_(Mus_musculus)_(DBD_1.00) HTAATKRNN 2.5e-001 3.3e-004 -8.00 0.0 106 492 697 2753 0.21545 1.4e-006 245 3 M1157_1.02 (HOXB9)_(PBM_CONSTRUCTS)_(DBD_1.00) WTTWATKRBN 1.7e-030 2.3e-033 -75.17 0.0 193 491 1392 2724 0.39308 9.3e-036 245 3 M1163_1.02 (NKX6-3)_(PBM_CONSTRUCTS)_(DBD_1.00) NWTAATKRN 1.5e-003 2.0e-006 -13.13 0.0 110 492 705 2602 0.22358 8.1e-009 245 3 M1266_1.02 (IRF6)_(Mus_musculus)_(DBD_1.00) NVNCGAWACY 2.5e-106 3.3e-109 -249.78 0.0 65 491 860 2968 0.13238 1.4e-111 245 3 M1528_1.02 (RFX6)_(Mus_musculus)_(DBD_0.66) VCNTRGYWAC 4.6e-020 6.2e-023 -51.14 0.0 89 491 763 2956 0.18126 2.5e-025 245 3 M1529_1.02 (RFX7)_(Mus_musculus)_(DBD_1.00) VCNTRGYAAC 1.2e-038 1.6e-041 -93.95 0.0 87 491 832 2963 0.17719 6.5e-044 245 3 M1583_1.02 (BBX)_(Mus_musculus)_(DBD_0.99) TTCATTGA 9.2e-001 1.2e-003 -6.70 0.0 131 493 655 2121 0.26572 5.0e-006 246 3 M1863_1.02 FOXD1 GTAAACAW 9.7e-003 1.3e-005 -11.25 0.0 187 493 1146 2666 0.37931 5.3e-008 246 3 M1868_1.02 GATA2 DSAGATAAGAAHYH 2.1e-004 2.8e-007 -15.10 0.0 145 487 945 2689 0.29774 1.1e-009 243 3 M1955_1.02 STAT1 TTTCYRGGAAA 3.8e-005 5.1e-008 -16.80 0.0 40 490 312 2671 0.08163 2.1e-010 244 3 M1968_1.02 EBF1 TCCCWGGGGRV 1.4e0000 1.8e-003 -6.32 0.0 114 490 739 2755 0.23265 7.4e-006 244 3 M1970_1.02 NFIC TGCCAA 4.8e0000 6.4e-003 -5.06 0.0 253 495 1637 2986 0.51111 2.6e-005 247 3 M2267_1.02 CDX2 TTTTATKRCHB 1.0e-023 1.4e-026 -59.55 0.0 196 490 1320 2598 0.40000 5.6e-029 244 3 M2278_1.02 FOS DVTGASTCATB 1.3e-001 1.7e-004 -8.66 0.0 228 490 1235 2399 0.46531 7.1e-007 244 3 M2287_1.02 (HOXC9)_(Mus_musculus)_(DBD_0.98) RGCMATAAATCAB 7.0e-012 9.3e-015 -32.31 0.0 174 488 1116 2554 0.35656 3.8e-017 243 3 M2289_1.02 JUN DDRATGATGTMAT 3.0e-006 4.0e-009 -19.34 0.0 208 488 1156 2337 0.42623 1.6e-011 243 3 M2292_1.02 JUND DRTGASTCATS 1.2e-002 1.5e-005 -11.08 0.0 226 490 1169 2262 0.46122 6.3e-008 244 3 M2296_1.02 MAFK MWDASTCAGCAWWWW 9.0e-002 1.2e-004 -9.03 0.0 128 486 835 2734 0.26337 4.9e-007 242 3 M2301_1.02 NFYB VHMYBRRCCAATCAG 5.5e0000 7.3e-003 -4.91 0.0 228 486 1179 2307 0.46914 3.0e-005 242 3 M2385_1.02 FOXP2 RWGTAAACAVR 3.6e-002 4.8e-005 -9.94 0.0 116 490 759 2722 0.23673 2.0e-007 244 3 M2392_1.02 RFX2 GTYDCCATGGCAACVRVNN 4.7e-013 6.2e-016 -35.02 0.0 90 482 579 2212 0.18672 2.6e-018 240 3 M4344_1.02 (ARID2)_(Saccharomyces_cerevisiae)_(DBD_0.26) SGTTGCYA 6.9e-004 9.3e-007 -13.89 0.0 99 493 696 2835 0.20081 3.8e-009 246 3 M4463_1.02 IRF4 DNWSNRGAAVTGAVWSWD 2.0e-002 2.6e-005 -10.54 0.0 149 483 1039 2942 0.30849 1.1e-007 241 3 M4476_1.02 RFX5 TCABYWGTTGCYRGG 3.6e-039 4.8e-042 -95.13 0.0 64 486 646 2835 0.13169 2.0e-044 242 3 M4478_1.02 STAT3 SHBVTSAYTTCYRGKAAATR 4.6e-002 6.2e-005 -9.69 0.0 125 481 781 2567 0.25988 2.6e-007 240 3 M4526_1.02 SMARCC1 DSRVDGTGASTCAKV 6.6e0000 8.8e-003 -4.73 0.0 272 486 1475 2460 0.55967 3.7e-005 242 3 M4567_1.02 FOXA2 NMWRWGTAAACANNN 4.6e-004 6.1e-007 -14.30 0.0 94 486 666 2791 0.19342 2.5e-009 242 3 M4600_1.02 GATA1 NSAGATAAGVV 1.5e-003 2.0e-006 -13.14 0.0 146 490 977 2811 0.29796 8.0e-009 244 3 M4619_1.02 FOSL1 BGGTGASTCAK 1.0e0000 1.3e-003 -6.61 0.0 228 490 1143 2233 0.46531 5.5e-006 244 3 M4629_1.02 NFE2 VRTGACTCAGCANWWYB 1.4e-003 1.8e-006 -13.23 0.0 164 484 810 2027 0.33884 7.5e-009 241 3 M4635_1.02 STAT2 GAAANYGAAACTDAA 6.3e-009 8.3e-012 -25.51 0.0 150 486 1012 2686 0.30864 3.4e-014 242 3 M4681_1.02 BACH2 TGCTGAGTCA 1.0e-002 1.4e-005 -11.19 0.0 215 491 1088 2201 0.43788 5.7e-008 245 3 M4971_1.02 (FERD3L)_(Drosophila_melanogaster)_(DBD_0.89) GTVACAGVTG 1.6e0000 2.1e-003 -6.17 0.0 205 491 1323 2894 0.41752 8.5e-006 245 3 M5292_1.02 ATF4 RKATGAYGCAATM 5.0e0000 6.6e-003 -5.02 0.0 166 488 796 2081 0.34016 2.7e-005 243 3 M5293_1.02 ATF7 NKATGACGTCATHN 2.0e-004 2.7e-007 -15.12 0.0 173 487 484 1091 0.35524 1.1e-009 243 3 M5302_1.02 BATF3 TGATGACGTCATCA 2.6e-001 3.5e-004 -7.96 0.0 147 487 201 501 0.30185 1.4e-006 243 3 M5303_1.02 BCL6B TGCTTTCTAGGAATTCM 1.4e-001 1.8e-004 -8.62 0.0 36 484 63 441 0.07438 7.5e-007 241 3 M5310_1.02 BSX NTAATBRS 4.2e-004 5.6e-007 -14.39 0.0 143 493 907 2645 0.29006 2.3e-009 246 3 M5323_1.02 CREB3 KGRTGACGTCAYNV 6.5e-001 8.6e-004 -7.05 0.0 173 487 468 1112 0.35524 3.6e-006 243 3 M5342_1.02 DLX4 NTAATTRN 4.4e0000 5.8e-003 -5.15 0.0 137 493 871 2781 0.27789 2.4e-005 246 3 M5344_1.02 DLX6 NTAATTRB 1.8e0000 2.4e-003 -6.05 0.0 143 493 904 2758 0.29006 9.6e-006 246 3 M5414_1.02 ESX1 DNTAATTRRN 4.0e0000 5.3e-003 -5.24 0.0 135 491 853 2749 0.27495 2.2e-005 245 3 M5428_1.02 EVX2 NNTAATKABB 2.9e0000 3.9e-003 -5.56 0.0 107 491 671 2661 0.21792 1.6e-005 245 3 M5435_1.02 FOXB1 TCGCYGTGTCATTC 5.3e0000 7.0e-003 -4.96 0.0 199 487 968 2143 0.40862 2.9e-005 243 3 M5446_1.02 FOXD4L2 RTAAACA 1.3e-005 1.7e-008 -17.88 0.0 156 494 1061 2848 0.31579 7.0e-011 246 3 M5460_1.02 FOXL1 RTAAACA 5.1e-004 6.8e-007 -14.20 0.0 166 494 1088 2797 0.33603 2.8e-009 246 3 M5502_1.02 GSX1 NBTAATKRSN 2.1e-002 2.7e-005 -10.50 0.0 127 491 835 2759 0.25866 1.1e-007 245 3 M5503_1.02 GSX2 DYTAATKRVN 6.2e-003 8.2e-006 -11.71 0.0 129 491 848 2743 0.26273 3.4e-008 245 3 M5518_1.02 HMX1 NDTTAATTGNT 3.0e-005 4.0e-008 -17.03 0.0 186 490 1209 2757 0.37959 1.7e-010 244 3 M5519_1.02 HMX2 NDTTAAKTGBT 8.2e-005 1.1e-007 -16.03 0.0 132 490 911 2833 0.26939 4.5e-010 244 3 M5520_1.02 HMX3 BNTTAAKTGNY 2.2e-004 2.9e-007 -15.04 0.0 188 490 1251 2851 0.38367 1.2e-009 244 3 M5541_1.02 HOXB2 NNTAATKANN 6.1e-001 8.1e-004 -7.11 0.0 107 491 684 2687 0.21792 3.3e-006 245 3 M5542_1.02 HOXB3 NYTAATKRNN 2.8e-001 3.8e-004 -7.88 0.0 129 491 822 2715 0.26273 1.5e-006 245 3 M5543_1.02 HOXB5 NHTAATKRNN 2.5e0000 3.4e-003 -5.70 0.0 95 491 642 2850 0.19348 1.4e-005 245 3 M5544_1.02 HOXC10 DTTTWATKDB 9.1e-015 1.2e-017 -38.95 0.0 153 491 1094 2782 0.31161 4.9e-020 245 3 M5547_1.02 HOXC11 DGTCRTWAAAH 1.6e-015 2.2e-018 -40.67 0.0 242 490 1500 2561 0.49388 8.9e-021 244 3 M5551_1.02 HOXC12 TTTTATTRC 3.8e-009 5.1e-012 -26.00 0.0 204 492 1330 2734 0.41463 2.1e-014 245 3 M5553_1.02 HOXC13 CYAATAAAAH 3.8e-014 5.1e-017 -37.52 0.0 121 491 870 2693 0.24644 2.1e-019 245 3 M5555_1.02 HOXD11 RTCGTAAAAH 4.6e-008 6.1e-011 -23.52 0.0 115 491 734 2465 0.23422 2.5e-013 245 3 M5557_1.02 HOXD12 GTAATAAAA 1.7e-007 2.3e-010 -22.21 0.0 194 492 1266 2748 0.39431 9.2e-013 245 3 M5583_1.02 ISL2 YTAAKTGC 1.8e0000 2.4e-003 -6.01 0.0 187 493 1204 2878 0.37931 1.0e-005 246 3 M5587_1.02 JDP2 ATGASTCAT 9.1e-008 1.2e-010 -22.83 0.0 230 492 1153 2114 0.46748 5.0e-013 245 3 M5621_1.02 MEIS3 SCTGTCAH 2.1e-001 2.9e-004 -8.16 0.0 163 493 1096 2946 0.33063 1.2e-006 246 3 M5623_1.02 MEOX1 VSTAATTANC 5.7e-001 7.7e-004 -7.17 0.0 107 491 663 2596 0.21792 3.1e-006 245 3 M5624_1.02 MEOX2 NSTAATTAWN 2.9e-003 3.8e-006 -12.48 0.0 107 491 717 2728 0.21792 1.6e-008 245 3 M5635_1.02 MNX1 TTTAATTRNH 4.9e-003 6.5e-006 -11.95 0.0 173 491 1086 2693 0.35234 2.6e-008 245 3 M5636_1.02 MSC AACAGCTGTT 9.1e-005 1.2e-007 -15.93 0.0 109 491 665 2417 0.22200 4.9e-010 245 3 M5643_1.02 MYBL1 RCCGTTAAACBG 3.2e-013 4.3e-016 -35.39 0.0 113 489 697 2236 0.23108 1.8e-018 244 3 M5660_1.02 NFIA TTGGCANNDTGCCAR 1.3e-001 1.7e-004 -8.65 0.0 248 486 865 1511 0.51029 7.2e-007 242 3 M5662_1.02 NFIB TTGGCAHNDTGCCAR 1.2e-001 1.6e-004 -8.76 0.0 248 486 887 1550 0.51029 6.5e-007 242 3 M5664_1.02 NFIX TTGGCANNNHGCCAR 1.6e-002 2.1e-005 -10.79 0.0 248 486 1268 2241 0.51029 8.5e-008 242 3 M5689_1.02 NRL DWWNTGCTGAC 5.1e-002 6.8e-005 -9.60 0.0 204 490 1373 2971 0.41633 2.8e-007 244 3 M5750_1.02 PRDM4 GGGGGCCTTGAAA 4.1e-148 5.5e-151 -345.99 0.0 80 488 683 1498 0.16393 2.3e-153 243 3 M5753_1.02 PROX1 YAAGACGYCTTA 9.6e-001 1.3e-003 -6.66 0.0 449 489 1249 1315 0.91820 5.3e-006 244 3 M5777_1.02 RFX4 NGTWRCCATGGYWACS 1.3e-001 1.8e-004 -8.65 0.0 99 485 424 1673 0.20412 7.3e-007 242 3 M5944_1.02 VAX1 YTAATTAN 6.0e0000 8.0e-003 -4.83 0.0 95 493 602 2690 0.19270 3.3e-005 246 3 M5945_1.02 VAX2 YTAATTAN 1.6e0000 2.1e-003 -6.18 0.0 95 493 614 2715 0.19270 8.4e-006 246 3 M5955_1.02 YY2 WAATGGCGGWY 9.6e-001 1.3e-003 -6.66 0.0 44 490 297 2567 0.08980 5.3e-006 244 3 M5974_1.02 ZNF524 GGGTTCRAGGGT 5.5e0000 7.3e-003 -4.92 0.0 47 489 241 1940 0.09611 3.0e-005 244 3 M5998_1.02 (CREB5)_(Mus_musculus)_(DBD_1.00) DRTGACGTCATN 7.0e-005 9.3e-008 -16.19 0.0 197 489 685 1415 0.40286 3.8e-010 244 3 M6114_1.02 FOXA1 WAWGYAAAYA 2.5e-001 3.3e-004 -8.02 0.0 95 491 640 2790 0.19348 1.3e-006 245 3 M6140_1.02 AIRE HTTGGWWWWWWTGGDTWH 2.5e-001 3.3e-004 -8.01 0.0 59 483 429 2816 0.12215 1.4e-006 241 3 M6159_1.02 BCL6 TTCCWRGAAWGYHHWH 2.9e-007 3.8e-010 -21.68 0.0 29 485 270 2900 0.05979 1.6e-012 242 3 M6167_1.02 CDX1 HCATAAAD 1.4e-004 1.9e-007 -15.47 0.0 193 493 1289 2885 0.39148 7.8e-010 246 3 M6174_1.02 CEBPZ AGCCAATSAGH 1.8e0000 2.4e-003 -6.03 0.0 258 490 1358 2382 0.52653 9.9e-006 244 3 M6180_1.02 CREB1 RTGACGTMA 9.0e0000 1.2e-002 -4.43 0.0 242 492 1395 2632 0.49187 4.9e-005 245 3 M6181_1.02 CREM CRVTGACGTCA 4.9e-001 6.5e-004 -7.34 0.0 252 490 1403 2506 0.51429 2.7e-006 244 3 M6185_1.02 CXXC1 CGKTGKY 4.3e-004 5.7e-007 -14.37 0.0 70 494 526 2903 0.14170 2.3e-009 246 3 M6192_1.02 E2F3 SSCGCSAAAC 2.6e-001 3.4e-004 -7.98 0.0 79 491 396 1968 0.16090 1.4e-006 245 3 M6197_1.02 E4F1 YGTKACGTC 9.1e0000 1.2e-002 -4.41 0.0 252 492 1126 2026 0.51220 5.0e-005 245 3 M6205_1.02 ELF3 GGSAAACAGGAARY 3.2e-001 4.3e-004 -7.75 0.0 63 487 450 2815 0.12936 1.8e-006 243 3 M6228_1.02 FOSB CTGACTCAYV 6.6e-003 8.8e-006 -11.64 0.0 161 491 1063 2827 0.32790 3.6e-008 245 3 M6235_1.02 FOXC1 CYWAAGTAAACAWHG 4.4e-005 5.8e-008 -16.66 0.0 104 486 641 2394 0.21399 2.4e-010 242 3 M6237_1.02 FOXD3 AAACAAACA 1.3e-004 1.7e-007 -15.58 0.0 166 492 1097 2796 0.33740 7.0e-010 245 3 M6238_1.02 FOXF1 WAAATAAACAW 1.5e-003 2.0e-006 -13.12 0.0 144 490 928 2696 0.29388 8.2e-009 244 3 M6239_1.02 FOXF2 HWADGTAAACA 4.2e-002 5.6e-005 -9.78 0.0 112 490 721 2666 0.22857 2.3e-007 244 3 M6241_1.02 FOXJ2 WAAAYAAAYA 4.9e-001 6.5e-004 -7.33 0.0 163 491 1029 2756 0.33198 2.7e-006 245 3 M6244_1.02 FOXM1 RWAAWCAMWCAAV 3.8e-007 5.0e-010 -21.41 0.0 128 488 930 2903 0.26230 2.1e-012 243 3 M6246_1.02 FOXO3 MKGWAAACAARYM 1.6e-005 2.1e-008 -17.69 0.0 94 488 696 2890 0.19262 8.5e-011 243 3 M6256_1.02 GATA4 RSWGATAAV 6.1e-006 8.1e-009 -18.63 0.0 180 492 1216 2857 0.36585 3.3e-011 245 3 M6258_1.02 GATA6 NWGATAA 3.7e-003 4.9e-006 -12.22 0.0 262 494 1614 2772 0.53036 2.0e-008 246 3 M6277_1.02 HLF SKRTTACRYAAYH 5.8e0000 7.7e-003 -4.87 0.0 140 488 693 2120 0.28689 3.2e-005 243 3 M6289_1.02 HOXA9 WCATAAAYYRTH 2.0e-003 2.6e-006 -12.85 0.0 171 489 1054 2618 0.34969 1.1e-008 244 3 M6290_1.02 HOXA13 CCAATAAWAHC 1.0e-010 1.3e-013 -29.64 0.0 196 490 1309 2752 0.40000 5.5e-016 244 3 M6297_1.02 HOXB7 MATYAATCAA 1.2e-001 1.6e-004 -8.77 0.0 161 491 853 2267 0.32790 6.3e-007 245 3 M6300_1.02 HOXC8 GSBHATYAATSAAR 5.2e-002 6.9e-005 -9.58 0.0 157 487 969 2628 0.32238 2.8e-007 243 3 M6302_1.02 HOXD13 TCYCTAATAAA 1.4e0000 1.9e-003 -6.29 0.0 16 490 138 2863 0.03265 7.6e-006 244 3 M6304_1.02 HOXD9 HMATNAAWYT 6.1e-009 8.1e-012 -25.53 0.0 101 491 723 2720 0.20570 3.3e-014 245 3 M6308_1.02 IRF2 SGAAAGYGAAASYV 7.1e-006 9.4e-009 -18.48 0.0 153 487 1026 2751 0.31417 3.9e-011 243 3 M6309_1.02 IRF3 GGAAAGBGAAASBRRRA 1.6e0000 2.1e-003 -6.17 0.0 46 484 335 2790 0.09504 8.7e-006 241 3 M6312_1.02 IRF7 GAAASYGAAA 2.7e-007 3.6e-010 -21.75 0.0 51 491 426 2925 0.10387 1.5e-012 245 3 M6313_1.02 IRF8 GRGRAAVTGAAASYR 7.8e-005 1.0e-007 -16.08 0.0 142 486 1013 2938 0.29218 4.3e-010 242 3 M6314_1.02 IRF9 GAAAGCGAAAYT 7.7e-014 1.0e-016 -36.82 0.0 83 489 561 2315 0.16973 4.2e-019 244 3 M6328_1.02 LHX2 YRSDTKYAATWAG 1.4e-005 1.8e-008 -17.82 0.0 114 488 739 2560 0.23361 7.5e-011 243 3 M6331_1.02 MAFB WGCTGACDS 4.1e-002 5.5e-005 -9.82 0.0 368 492 2343 2975 0.74797 2.2e-007 245 3 M6332_1.02 MAF KTGCTGAC 1.1e0000 1.4e-003 -6.54 0.0 369 493 2332 2978 0.74848 5.9e-006 246 3 M6333_1.02 MAFG MATGACT 5.1e-007 6.8e-010 -21.11 0.0 208 494 1403 2893 0.42105 2.8e-012 246 3 M6343_1.02 MEIS1 CDTWAAVCTGTCA 1.4e-022 1.8e-025 -56.97 0.0 88 488 711 2677 0.18033 7.5e-028 243 3 M6344_1.02 MEIS2 KGACAVCTGTCAA 4.9e-002 6.5e-005 -9.63 0.0 202 488 1144 2465 0.41393 2.7e-007 243 3 M6350_1.02 MYB CMGTTRD 6.0e-012 7.9e-015 -32.47 0.0 122 494 882 2778 0.24696 3.2e-017 246 3 M6357_1.02 NANOG KTTAATGG 1.5e-003 2.0e-006 -13.15 0.0 107 493 705 2676 0.21704 7.9e-009 246 3 M6359_1.02 NFE2L1 NATGACD 6.0e-004 8.0e-007 -14.04 0.0 226 494 1487 2907 0.45749 3.2e-009 246 3 M6361_1.02 NFATC1 AWGGAAWTTTCCD 8.6e0000 1.2e-002 -4.46 0.0 80 488 443 2270 0.16393 4.8e-005 243 3 M6370_1.02 NFKB2 GRAATBYCCCT 1.9e0000 2.5e-003 -5.97 0.0 50 490 369 2913 0.10204 1.0e-005 244 3 M6374_1.02 NKX2-1 STCAAGKGCH 3.1e-004 4.2e-007 -14.69 0.0 187 491 1295 2985 0.38086 1.7e-009 245 3 M6375_1.02 NKX2-2 HAAVYACTTRAM 3.5e-003 4.7e-006 -12.27 0.0 129 489 819 2624 0.26380 1.9e-008 244 3 M6376_1.02 NKX2-5 TYAAGTG 7.7e-005 1.0e-007 -16.10 0.0 124 494 887 2945 0.25101 4.1e-010 246 3 M6377_1.02 NKX2-8 TTCAAGKRC 5.5e-022 7.4e-025 -55.57 0.0 94 492 790 2887 0.19106 3.0e-027 245 3 M6396_1.02 NR5A2 TRRCCTTGRV 3.3e-005 4.4e-008 -16.93 0.0 53 491 426 2921 0.10794 1.8e-010 245 3 M6402_1.02 OVOL1 KGTAACKGT 5.2e-006 6.9e-009 -18.79 0.0 58 492 438 2732 0.11789 2.8e-011 245 3 M6406_1.02 PAX2 RHTCAGTSAYGMGTGAYW 8.7e-002 1.2e-004 -9.06 0.0 245 483 1468 2645 0.50725 4.8e-007 241 3 M6413_1.02 PBX2 VMATCAATCAMWTYM 9.1e0000 1.2e-002 -4.42 0.0 128 486 823 2777 0.26337 5.0e-005 242 3 M6415_1.02 PDX1 CTAATTACY 9.2e-002 1.2e-004 -9.01 0.0 238 492 1265 2368 0.48374 5.0e-007 245 3 M6416_1.02 CBFB YYTGTGGTYDB 9.1e-003 1.2e-005 -11.33 0.0 92 490 671 2955 0.18776 4.9e-008 244 3 M6419_1.02 PKNOX1 HATCARTCAABYB 9.4e-002 1.2e-004 -8.99 0.0 190 488 1194 2744 0.38934 5.1e-007 243 3 M6451_1.02 RFX1 GTTGCYAGGSAA 1.9e-004 2.5e-007 -15.19 0.0 55 489 415 2759 0.11247 1.0e-009 244 3 M6453_1.02 RFX3 TYRCCATGGYAACV 2.1e-005 2.9e-008 -17.37 0.0 53 487 294 1865 0.10883 1.2e-010 243 3 M6457_1.02 RUNX1 WAACCACARW 4.3e-003 5.8e-006 -12.06 0.0 93 491 676 2940 0.18941 2.4e-008 245 3 M6459_1.02 RUNX3 AACCRCAAAMCCCV 2.1e-002 2.8e-005 -10.49 0.0 85 487 549 2559 0.17454 1.1e-007 243 3 M6471_1.02 SOX13 YATTGTTY 4.8e0000 6.4e-003 -5.05 0.0 33 493 245 2822 0.06694 2.6e-005 246 3 M6491_1.02 STAT5A YTTCYVRGAAWT 2.3e0000 3.0e-003 -5.80 0.0 21 489 168 2782 0.04294 1.2e-005 244 3 M6492_1.02 STAT5B DTTTCYDGGAATT 1.2e-002 1.6e-005 -11.07 0.0 24 488 176 2366 0.04918 6.4e-008 243 3 M6498_1.02 NR5A1 TGRCCTTGR 9.1e0000 1.2e-002 -4.42 0.0 86 492 600 2959 0.17480 5.0e-005 245 3 M6529_1.02 UBP1 TYTCTGS 2.4e-005 3.2e-008 -17.25 0.0 76 494 591 2998 0.15385 1.3e-010 246 3 M6545_1.02 HIVEP2 GGYDGGGWAACYSS 2.8e0000 3.7e-003 -5.59 0.0 31 487 242 2901 0.06366 1.5e-005 243 3 M6559_1.02 ZNF589 CCMASGGKWWYWRCCS 8.0e0000 1.1e-002 -4.54 0.0 215 485 1339 2787 0.44330 4.4e-005 242 ## # Detailed descriptions of columns in this file: # # db: The name of the database (file name) that contains the motif. # id: A name for the motif that is unique in the motif database file. # alt: An alternate name of the motif that may be provided # in the motif database file. # consensus: A consensus sequence computed from the motif. # E-value: The expected number motifs that would have least one. # region as enriched for best matches to the motif as the reported region. # The E-value is the p-value multiplied by the number of motifs in the # input database(s). # adj_p-value: The probability that any tested region would be as enriched for # best matches to this motif as the reported region is. # By default the p-value is calculated by using the one-tailed binomial # test on the number of sequences with a match to the motif # that have their best match in the reported region, corrected for # the number of regions and score thresholds tested. # The test assumes that the probability that the best match in a sequence # falls in the region is the region width divided by the # number of places a motif # can align in the sequence (sequence length minus motif width plus 1). # When CentriMo is run in discriminative mode with a negative # set of sequences, the p-value of a region is calculated # using the Fisher exact test on the # enrichment of best matches in the positive sequences relative # to the negative sequences, corrected # for the number of regions and score thresholds tested. # The test assumes that the probability that the best match (if any) # falls into a given region # is the same for all positive and negative sequences. # log_adj_p-value: Log of adjusted p-value. # bin_location: Location of the center of the most enriched region. # bin_width: The width (in sequence positions) of the most enriched region. # A best match to the motif is counted as being in the region if the # center of the motif falls in the region. # total_width: The window maximal size which can be reached for this motif: # rounded(sequence length - motif length +1)/2 # sites_in_bin: The number of (positive) sequences whose best match to the motif # falls in the reported region. # Note: This number may be less than the number of # (positive) sequences that have a best match in the region. # The reason for this is that a sequence may have many matches that score # equally best. # If n matches have the best score in a sequence, 1/n is added to the # appropriate bin for each match. # total_sites: The number of sequences containing a match to the motif # above the score threshold. # p_success: The probability of falling in the enriched window: # bin width / total width # p-value: The uncorrected p-value before it gets adjusted to the # number of multiple tests to give the adjusted p-value. # mult_tests: This is the number of multiple tests (n) done for this motif. # It was used to correct the original p-value of a region for # multiple tests using the formula: # p' = 1 - (1-p)^n where p is the uncorrected p-value. # The number of multiple tests is the number of regions # considered times the number of score thresholds considered. # It depends on the motif length, sequence length, and the type of # optimizations being done (central enrichment, local enrichment, # score optimization).