# WARNING: this file is not sorted! # db id alt consensus E-value adj_p-value log_adj_p-value bin_location bin_width total_width sites_in_bin total_sites p_success p-value mult_tests 1 CWGCTWCTGHDG MEME-1 CWGCTWCTGHDG 2.8e-028 3.7e-031 -70.07 0.0 85 489 226 588 0.17382 1.5e-033 244 1 VHAAARWAAACA MEME-3 VHAAARWAAACA 7.7e-007 1.0e-009 -20.69 0.0 167 489 248 506 0.34151 4.3e-012 244 2 CAGDAGC DREME-1 CAGDAGC 2.2e-023 3.0e-026 -58.78 0.0 106 494 159 320 0.21457 1.2e-028 246 2 GTAAWY DREME-2 GTAAWY 2.3e-005 3.1e-008 -17.28 0.0 169 495 209 425 0.34141 1.3e-010 247 2 GCYACY DREME-5 GCYACY 4.7e-006 6.3e-009 -18.88 0.0 143 495 195 446 0.28889 2.6e-011 247 2 RTGASTCA DREME-6 RTGASTCA 9.4e-005 1.3e-007 -15.88 0.0 203 493 88 129 0.41176 5.1e-010 246 2 CAGSAG DREME-7 CAGCAG 9.2e-004 1.2e-006 -13.60 0.0 69 495 111 462 0.13939 5.0e-009 247 3 M0178_1.02 (ASCL2)_(Mus_musculus)_(DBD_0.98) NVCAGCTGBN 4.2e0000 5.6e-003 -5.18 0.0 97 491 157 586 0.19756 2.3e-005 245 3 M0216_1.02 (NHLH2)_(Mus_musculus)_(DBD_1.00) NGCAGCTGYN 5.8e-002 7.9e-005 -9.45 0.0 99 491 170 589 0.20163 3.2e-007 245 3 M0300_1.02 (ATF2)_(Mus_musculus)_(DBD_1.00) NRTKACGTMA 2.9e-005 3.9e-008 -17.05 0.0 279 491 393 563 0.56823 1.6e-010 245 3 M0396_1.02 (OSR2)_(Mus_musculus)_(DBD_1.00) WACRGTAGCN 4.2e-046 5.6e-049 -111.10 0.0 103 491 293 600 0.20978 2.3e-051 245 3 M0415_1.02 (KLF9)_(Mus_musculus)_(DBD_1.00) VTAACGGN 1.0e0001 1.3e-002 -4.31 0.0 147 493 191 504 0.29817 5.5e-005 246 3 M0431_1.02 (OSR1)_(Mus_musculus)_(DBD_1.00) MCRGTAGCN 1.2e-029 1.6e-032 -73.24 0.0 106 492 265 600 0.21545 6.4e-035 245 3 M0442_1.02 (ZBTB3)_(Mus_musculus)_(DBD_1.00) NNTGCAGYG 2.2e0000 2.9e-003 -5.84 0.0 312 492 429 599 0.63415 1.2e-005 245 3 M0718_1.02 FOXK1 DNRTMAACAH 1.8e-004 2.4e-007 -15.22 0.0 215 491 326 578 0.43788 1.0e-009 245 3 M0719_1.02 FOXG1 RTAAACAW 6.5e-003 8.7e-006 -11.65 0.0 173 493 250 537 0.35091 3.5e-008 246 3 M0728_1.02 (FOXJ1)_(Mus_musculus)_(DBD_1.00) NRTAAACAAANN 1.4e-001 1.9e-004 -8.58 0.0 155 489 235 568 0.31697 7.7e-007 244 3 M0736_1.02 (FOXK2)_(Mus_musculus)_(DBD_0.90) RTAAACAA 1.2e-002 1.6e-005 -11.02 0.0 207 493 306 577 0.41988 6.7e-008 246 3 M0737_1.02 (FOXB2)_(Mus_musculus)_(DBD_0.94) WRWGTAAAYA 1.5e-003 2.0e-006 -13.13 0.0 231 491 337 571 0.47047 8.1e-009 245 3 M0747_1.02 (FOXL2)_(Mus_musculus)_(DBD_0.70) WNNRTAAAYA 7.2e-005 9.7e-008 -16.15 0.0 171 491 275 580 0.34827 3.9e-010 245 3 M0890_1.02 LHX6 NYAATCAN 9.4e0000 1.3e-002 -4.37 0.0 299 493 398 581 0.60649 5.2e-005 246 3 M0891_1.02 TLX2 NTAAWNNNNN 2.9e0000 3.9e-003 -5.54 0.0 185 491 50 82 0.37678 1.6e-005 245 3 M0892_1.02 EMX1 NYTAATKAVN 4.8e-006 6.4e-009 -18.86 0.0 155 491 255 569 0.31568 2.6e-011 245 3 M0893_1.02 ZFHX2 NNTAATTANN 8.1e-001 1.1e-003 -6.82 0.0 157 491 219 531 0.31976 4.5e-006 245 3 M0894_1.02 LBX1 TTAATTAG 5.2e-002 7.0e-005 -9.57 0.0 119 493 183 542 0.24138 2.8e-007 246 3 M0896_1.02 VENTX TTAATTAG 7.0e-003 9.4e-006 -11.57 0.0 119 493 187 542 0.24138 3.8e-008 246 3 M0897_1.02 HOXB13 DTTWAYDRBN 1.7e-010 2.3e-013 -29.08 0.0 127 491 232 559 0.25866 9.5e-016 245 3 M0900_1.02 SHOX HTAATTRV 2.9e-002 4.0e-005 -10.14 0.0 167 493 251 565 0.33874 1.6e-007 246 3 M0905_1.02 (HOXA4)_(Mus_musculus)_(DBD_1.00) NTAATKRNN 5.4e-007 7.2e-010 -21.05 0.0 190 492 284 530 0.38618 2.9e-012 245 3 M0931_1.02 (LHX1)_(Mus_musculus)_(DBD_1.00) TAATTRNNN 1.7e0000 2.3e-003 -6.07 0.0 158 492 225 549 0.32114 9.4e-006 245 3 M0943_1.02 (OTP)_(Mus_musculus)_(DBD_1.00) NYTAATTR 9.0e-002 1.2e-004 -9.02 0.0 159 493 226 532 0.32252 4.9e-007 246 3 M0949_1.02 (AC012531.1)_(Mus_musculus)_(DBD_1.00) NTAATDR 6.1e-007 8.2e-010 -20.92 0.0 190 494 259 479 0.38462 3.3e-012 246 3 M0961_1.02 (BARHL1)_(Mus_musculus)_(DBD_1.00) NTAAWYGNN 2.6e0000 3.5e-003 -5.67 0.0 136 492 205 572 0.27642 1.4e-005 245 3 M0969_1.02 (LHX8)_(Mus_musculus)_(DBD_1.00) NYAATYANN 4.5e-005 6.1e-008 -16.61 0.0 184 492 292 581 0.37398 2.5e-010 245 3 M0975_1.02 (LHX5)_(Mus_musculus)_(DBD_1.00) TAATTRNNN 4.8e-002 6.5e-005 -9.65 0.0 168 492 248 556 0.34146 2.6e-007 245 3 M0999_1.02 (NKX6-1)_(Mus_musculus)_(DBD_1.00) NWTAATKRN 1.8e-002 2.4e-005 -10.65 0.0 190 492 281 568 0.38618 9.7e-008 245 3 M1007_1.02 (HOXA11)_(Mus_musculus)_(DBD_1.00) TTWAYDDNN 1.2e-008 1.6e-011 -24.86 0.0 186 492 148 239 0.37805 6.5e-014 245 3 M1012_1.02 (HOXB4)_(Mus_musculus)_(DBD_1.00) NTAATKRNN 6.9e-007 9.3e-010 -20.79 0.0 190 492 290 544 0.38618 3.8e-012 245 3 M1025_1.02 (HOXD1)_(Mus_musculus)_(DBD_0.98) NNYVATYA 1.8e-007 2.4e-010 -22.15 0.0 185 493 243 450 0.37525 9.8e-013 246 3 M1027_1.02 (HOXA6)_(Mus_musculus)_(DBD_1.00) WTAATKRBN 4.6e-007 6.2e-010 -21.19 0.0 190 492 298 560 0.38618 2.5e-012 245 3 M1030_1.02 (NKX2-3)_(Mus_musculus)_(DBD_1.00) NVYACTTVD 1.2e-002 1.7e-005 -11.01 0.0 180 492 282 596 0.36585 6.7e-008 245 3 M1039_1.02 (ENSG00000229544)_(Mus_musculus)_(DBD_1.00) NNTAATDRN 5.5e-006 7.4e-009 -18.72 0.0 176 492 274 554 0.35772 3.0e-011 245 3 M1070_1.02 (HOXC5)_(Mus_musculus)_(DBD_1.00) NTAATKRNN 2.5e-006 3.4e-009 -19.49 0.0 192 492 285 534 0.39024 1.4e-011 245 3 M1071_1.02 (HOXD3)_(Mus_musculus)_(DBD_1.00) NTAATKRN 8.4e-008 1.1e-010 -22.90 0.0 191 493 296 548 0.38742 4.6e-013 246 3 M1073_1.02 (HOXA3)_(Mus_musculus)_(DBD_1.00) HTAATKRNN 3.3e-004 4.4e-007 -14.63 0.0 182 492 284 577 0.36992 1.8e-009 245 3 M1125_1.02 (NKX1-1)_(Mus_musculus)_(DBD_1.00) NNTAATKRNN 8.4e-006 1.1e-008 -18.30 0.0 185 491 291 569 0.37678 4.6e-011 245 3 M1157_1.02 (HOXB9)_(PBM_CONSTRUCTS)_(DBD_1.00) WTTWATKRBN 2.0e-006 2.7e-009 -19.72 0.0 189 491 292 555 0.38493 1.1e-011 245 3 M1163_1.02 (NKX6-3)_(PBM_CONSTRUCTS)_(DBD_1.00) NWTAATKRN 5.0e-005 6.7e-008 -16.51 0.0 140 492 227 556 0.28455 2.7e-010 245 3 M1545_1.02 GMEB1 NNNRCGTNN 9.5e0000 1.3e-002 -4.35 0.0 364 492 343 417 0.73984 5.3e-005 245 3 M1581_1.02 (CIC)_(Mus_musculus)_(DBD_1.00) NNTGCTGACW 3.7e-001 5.0e-004 -7.61 0.0 373 491 493 588 0.75967 2.0e-006 245 3 M1863_1.02 FOXD1 GTAAACAW 4.8e-004 6.5e-007 -14.24 0.0 163 493 250 554 0.33063 2.6e-009 246 3 M2264_1.02 (ATOH1)_(Mus_musculus)_(DBD_1.00) RCCAKCTG 8.5e0000 1.1e-002 -4.47 0.0 241 493 328 574 0.48884 4.7e-005 246 3 M2267_1.02 CDX2 TTTTATKRCHB 2.4e-003 3.2e-006 -12.66 0.0 118 490 186 531 0.24082 1.3e-008 244 3 M2287_1.02 (HOXC9)_(Mus_musculus)_(DBD_0.98) RGCMATAAATCAB 4.6e-002 6.2e-005 -9.69 0.0 172 488 242 525 0.35246 2.5e-007 243 3 M2289_1.02 JUN DDRATGATGTMAT 5.3e-004 7.2e-007 -14.15 0.0 300 488 375 508 0.61475 2.9e-009 243 3 M2292_1.02 JUND DRTGASTCATS 2.7e-002 3.6e-005 -10.23 0.0 228 490 282 484 0.46531 1.5e-007 244 3 M2299_1.02 (MYF5)_(Mus_musculus)_(DBD_0.90) NRNRRCAGCTGSN 9.1e-001 1.2e-003 -6.70 0.0 166 488 244 568 0.34016 5.1e-006 243 3 M2385_1.02 FOXP2 RWGTAAACAVR 3.5e-003 4.7e-006 -12.26 0.0 120 490 194 554 0.24490 1.9e-008 244 3 M4473_1.02 PBX3 NBCDGCCAATSRGVR 3.3e0000 4.4e-003 -5.42 0.0 242 486 334 570 0.49794 1.8e-005 242 3 M4479_1.02 TCF12 VSAGCAGSTGB 4.2e-001 5.7e-004 -7.47 0.0 94 490 153 561 0.19184 2.3e-006 244 3 M4565_1.02 FOSL2 VDGGATGASTCAYH 1.4e0000 1.8e-003 -6.30 0.0 295 487 336 478 0.60575 7.6e-006 243 3 M4567_1.02 FOXA2 NMWRWGTAAACANNN 7.1e-005 9.5e-008 -16.17 0.0 218 486 333 577 0.44856 3.9e-010 242 3 M4619_1.02 FOSL1 BGGTGASTCAT 2.0e-001 2.7e-004 -8.23 0.0 234 490 273 464 0.47755 1.1e-006 244 3 M4623_1.02 JUNB NDRTGASTCATNYHY 4.0e0000 5.3e-003 -5.24 0.0 226 486 273 488 0.46502 2.2e-005 242 3 M4681_1.02 BACH2 TGCTGAGTCA 1.2e-001 1.6e-004 -8.74 0.0 165 491 211 476 0.33605 6.6e-007 245 3 M5284_1.02 ALX3 BNTAATTRGY 2.1e-001 2.8e-004 -8.19 0.0 191 491 270 552 0.38900 1.1e-006 245 3 M5292_1.02 ATF4 RKATGAYGCAATM 1.8e0000 2.5e-003 -6.01 0.0 220 488 258 468 0.45082 1.0e-005 243 3 M5293_1.02 ATF7 NKATGACGTCATHN 6.4e-004 8.6e-007 -13.96 0.0 291 487 198 257 0.59754 3.5e-009 243 3 M5302_1.02 BATF3 TGATGACGTCATCA 1.7e0000 2.3e-003 -6.08 0.0 259 487 91 126 0.53183 9.5e-006 243 3 M5310_1.02 BSX NTAATBRS 2.3e-009 3.1e-012 -26.49 0.0 169 493 277 551 0.34280 1.3e-014 246 3 M5323_1.02 CREB3 KGRTGACGTCAYNV 1.9e-002 2.5e-005 -10.59 0.0 291 487 193 256 0.59754 1.0e-007 243 3 M5339_1.02 DLX1 NNTAATTRNN 3.3e-001 4.4e-004 -7.72 0.0 5 491 20 555 0.01018 1.8e-006 245 3 M5342_1.02 DLX4 NTAATTRN 3.5e-001 4.7e-004 -7.67 0.0 189 493 272 567 0.38337 1.9e-006 246 3 M5343_1.02 DLX5 NTAATTRN 1.2e0000 1.7e-003 -6.40 0.0 199 493 282 570 0.40365 6.7e-006 246 3 M5344_1.02 DLX6 NTAATTRB 3.8e-001 5.2e-004 -7.57 0.0 175 493 255 567 0.35497 2.1e-006 246 3 M5345_1.02 DMBX1 NHTAATCCBH 3.6e-001 4.9e-004 -7.62 0.0 191 491 277 570 0.38900 2.0e-006 245 3 M5346_1.02 DPRX SHTAATCCNN 3.2e0000 4.4e-003 -5.44 0.0 191 491 276 582 0.38900 1.8e-005 245 3 M5388_1.02 EMX2 NYTAATTAVB 5.7e-007 7.6e-010 -21.00 0.0 141 491 230 537 0.28717 3.1e-012 245 3 M5390_1.02 EN1 VBTAATTRSB 9.0e-007 1.2e-009 -20.53 0.0 193 491 299 557 0.39308 4.9e-012 245 3 M5394_1.02 EN2 NNTAATTRVN 1.2e-001 1.6e-004 -8.73 0.0 151 491 228 562 0.30754 6.6e-007 245 3 M5414_1.02 ESX1 DNTAATTRRN 6.3e-004 8.5e-007 -13.98 0.0 157 491 247 565 0.31976 3.5e-009 245 3 M5422_1.02 ETV3 ACCGGAAGTR 7.8e0000 1.1e-002 -4.55 0.0 313 491 389 541 0.63747 4.3e-005 245 3 M5427_1.02 EVX1 SNTAATYABB 1.4e-003 2.0e-006 -13.15 0.0 189 491 286 569 0.38493 8.0e-009 245 3 M5428_1.02 EVX2 NNTAATKABB 4.4e-005 5.9e-008 -16.64 0.0 141 491 233 568 0.28717 2.4e-010 245 3 M5446_1.02 FOXD4L2 RTAAACA 3.7e-004 5.0e-007 -14.51 0.0 206 494 313 581 0.41700 2.0e-009 246 3 M5460_1.02 FOXL1 RTAAACA 1.6e-003 2.1e-006 -13.06 0.0 206 494 307 574 0.41700 8.7e-009 246 3 M5480_1.02 GBX1 RBTAATTRGB 8.2e-006 1.1e-008 -18.32 0.0 127 491 208 537 0.25866 4.5e-011 245 3 M5481_1.02 GBX2 NYTAATTRSB 3.6e-005 4.8e-008 -16.85 0.0 151 491 241 553 0.30754 2.0e-010 245 3 M5502_1.02 GSX1 NBTAATKRSN 1.7e-005 2.3e-008 -17.59 0.0 189 491 295 570 0.38493 9.4e-011 245 3 M5503_1.02 GSX2 DYTAATKRVN 5.3e-004 7.2e-007 -14.15 0.0 141 491 227 564 0.28717 2.9e-009 245 3 M5518_1.02 HMX1 NDTTAATTGNT 3.6e-005 4.8e-008 -16.85 0.0 198 490 304 568 0.40408 2.0e-010 244 3 M5519_1.02 HMX2 NDTTAAKTGBT 5.1e-002 6.9e-005 -9.58 0.0 198 490 295 581 0.40408 2.8e-007 244 3 M5520_1.02 HMX3 BNTTAAKTGNY 1.7e-004 2.3e-007 -15.28 0.0 198 490 308 583 0.40408 9.5e-010 244 3 M5541_1.02 HOXB2 NNTAATKANN 2.0e-004 2.7e-007 -15.14 0.0 159 491 254 571 0.32383 1.1e-009 245 3 M5542_1.02 HOXB3 NYTAATKRNN 7.1e-004 9.5e-007 -13.87 0.0 133 491 217 566 0.27088 3.9e-009 245 3 M5543_1.02 HOXB5 NHTAATKRNN 2.6e-004 3.5e-007 -14.85 0.0 197 491 305 582 0.40122 1.4e-009 245 3 M5544_1.02 HOXC10 DTTTWATKDB 8.3e-003 1.1e-005 -11.40 0.0 125 491 205 576 0.25458 4.6e-008 245 3 M5547_1.02 HOXC11 DGTCRTWAAAH 6.0e-003 8.1e-006 -11.73 0.0 142 490 217 544 0.28980 3.3e-008 244 3 M5551_1.02 HOXC12 TTTTATTRC 1.9e0000 2.5e-003 -5.99 0.0 164 492 237 564 0.33333 1.0e-005 245 3 M5553_1.02 HOXC13 CYAATAAAAH 2.9e-003 3.9e-006 -12.45 0.0 125 491 203 561 0.25458 1.6e-008 245 3 M5555_1.02 HOXD11 RTCGTAAAAH 7.9e-001 1.1e-003 -6.85 0.0 143 491 197 512 0.29124 4.3e-006 245 3 M5557_1.02 HOXD12 GTAATAAAA 4.1e-001 5.5e-004 -7.51 0.0 164 492 242 568 0.33333 2.2e-006 245 3 M5583_1.02 ISL2 YTAAKTGC 1.0e-002 1.4e-005 -11.20 0.0 195 493 294 582 0.39554 5.6e-008 246 3 M5587_1.02 JDP2 ATGASTCAT 2.9e-003 3.9e-006 -12.47 0.0 228 492 275 464 0.46341 1.6e-008 245 3 M5602_1.02 LHX9 YTAATTRN 6.6e-003 8.9e-006 -11.63 0.0 141 493 221 563 0.28600 3.6e-008 246 3 M5604_1.02 LMX1A YTAATTAA 3.7e-001 5.0e-004 -7.60 0.0 187 493 255 532 0.37931 2.0e-006 246 3 M5605_1.02 LMX1B TTAATTRN 3.6e0000 4.8e-003 -5.33 0.0 195 493 270 560 0.39554 2.0e-005 246 3 M5621_1.02 MEIS3 SCTGTCAH 9.4e0000 1.3e-002 -4.37 0.0 229 493 323 592 0.46450 5.2e-005 246 3 M5623_1.02 MEOX1 VSTAATTAHC 2.9e-005 3.8e-008 -17.07 0.0 151 491 242 556 0.30754 1.6e-010 245 3 M5624_1.02 MEOX2 DSTAATTAWN 2.4e-006 3.3e-009 -19.54 0.0 145 491 244 569 0.29532 1.3e-011 245 3 M5631_1.02 MIXL1 NBTAATTRVN 8.1e-003 1.1e-005 -11.43 0.0 151 491 233 561 0.30754 4.4e-008 245 3 M5635_1.02 MNX1 TTTAATTRNH 3.7e-002 5.0e-005 -9.90 0.0 127 491 201 563 0.25866 2.1e-007 245 3 M5636_1.02 MSC AACAGCTGTT 4.4e0000 6.0e-003 -5.12 0.0 231 491 278 494 0.47047 2.4e-005 245 3 M5660_1.02 NFIA TTGGCANNDTGCCAR 4.1e0000 5.5e-003 -5.21 0.0 280 486 233 340 0.57613 2.3e-005 242 3 M5662_1.02 NFIB TTGGCAHNDTGCCAR 4.2e0000 5.6e-003 -5.19 0.0 280 486 238 348 0.57613 2.3e-005 242 3 M5672_1.02 NOTO NBTAATTARN 1.7e-003 2.4e-006 -12.96 0.0 129 491 207 556 0.26273 9.6e-009 245 3 M5746_1.02 POU6F2 WTAATKAGST 4.3e-001 5.8e-004 -7.46 0.0 157 491 226 546 0.31976 2.4e-006 245 3 M5771_1.02 RAX DYTAATTRRY 4.3e-004 5.8e-007 -14.36 0.0 191 491 285 556 0.38900 2.4e-009 245 3 M5772_1.02 RAX2 BTAATTRR 4.0e-002 5.3e-005 -9.84 0.0 151 493 231 567 0.30629 2.2e-007 246 3 M5777_1.02 RFX4 NGTWRCCATGGYWACS 4.3e-001 5.9e-004 -7.44 0.0 69 485 83 351 0.14227 2.4e-006 242 3 M5807_1.02 SHOX2 YTAATTRR 3.2e-002 4.3e-005 -10.06 0.0 151 493 229 560 0.30629 1.7e-007 246 3 M5944_1.02 VAX1 YTAATTAN 6.1e-005 8.2e-008 -16.32 0.0 133 493 221 565 0.26978 3.3e-010 246 3 M5945_1.02 VAX2 YTAATTAN 7.4e-005 9.9e-008 -16.13 0.0 141 493 231 567 0.28600 4.0e-010 246 3 M5949_1.02 VSX1 YTAATTAN 1.5e-001 2.0e-004 -8.53 0.0 79 493 131 544 0.16024 8.0e-007 246 3 M5998_1.02 (CREB5)_(Mus_musculus)_(DBD_1.00) DRTGACGTCATN 4.5e-004 6.1e-007 -14.31 0.0 293 489 246 326 0.59918 2.5e-009 244 3 M6114_1.02 FOXA1 WAWGYAAAYA 4.7e-009 6.4e-012 -25.78 0.0 223 491 350 571 0.45418 2.6e-014 245 3 M6141_1.02 ALX1 TAATBYAATTAB 1.4e0000 1.9e-003 -6.25 0.0 177 489 242 533 0.36196 7.9e-006 244 3 M6152_1.02 ATF1 VTGACGTCAV 1.7e-002 2.3e-005 -10.69 0.0 339 491 385 483 0.69043 9.3e-008 245 3 M6157_1.02 BARX2 TYRWTAATKR 2.7e-001 3.7e-004 -7.91 0.0 155 491 227 551 0.31568 1.5e-006 245 3 M6180_1.02 CREB1 RTGACGTMA 7.2e-004 9.7e-007 -13.84 0.0 380 492 482 554 0.77236 4.0e-009 245 3 M6181_1.02 CREM CRVTGACGTCA 3.8e-002 5.1e-005 -9.88 0.0 294 490 366 517 0.60000 2.1e-007 244 3 M6189_1.02 DLX3 GMTAATTRSW 1.3e-004 1.7e-007 -15.58 0.0 141 491 220 536 0.28717 7.0e-010 245 3 M6228_1.02 FOSB CTGACTCAYV 7.2e-002 9.7e-005 -9.24 0.0 227 491 328 579 0.46232 4.0e-007 245 3 M6234_1.02 FOXA3 RVWAARYAAAYAD 2.5e-006 3.3e-009 -19.53 0.0 224 488 342 571 0.45902 1.4e-011 243 3 M6235_1.02 FOXC1 CYWAAGTAAACAWHG 2.8e-004 3.7e-007 -14.80 0.0 124 486 192 512 0.25514 1.5e-009 242 3 M6237_1.02 FOXD3 AAACAAACA 9.1e-001 1.2e-003 -6.70 0.0 182 492 260 564 0.36992 5.0e-006 245 3 M6238_1.02 FOXF1 WAAATAAACAW 2.8e-004 3.8e-007 -14.79 0.0 214 490 313 556 0.43673 1.5e-009 244 3 M6239_1.02 FOXF2 HWADGTAAACA 4.2e-006 5.6e-009 -18.99 0.0 216 490 323 556 0.44082 2.3e-011 244 3 M6241_1.02 FOXJ2 WAAAYAAAYA 9.8e-002 1.3e-004 -8.93 0.0 231 491 320 556 0.47047 5.4e-007 245 3 M6246_1.02 FOXO3 MKGWAAACAARYM 8.3e0000 1.1e-002 -4.50 0.0 96 488 152 574 0.19672 4.6e-005 243 3 M6247_1.02 FOXO4 MRTAAACAA 1.1e0000 1.5e-003 -6.51 0.0 182 492 265 575 0.36992 6.1e-006 245 3 M6275_1.02 HIF1A SBSTACGTGCSB 3.9e0000 5.2e-003 -5.26 0.0 227 489 243 431 0.46421 2.1e-005 244 3 M6290_1.02 HOXA13 CCAATAAWAHC 1.6e-001 2.1e-004 -8.45 0.0 126 490 194 555 0.25714 8.8e-007 244 3 M6292_1.02 HOXA5 CATTAATYAR 5.0e-003 6.8e-006 -11.90 0.0 125 491 194 535 0.25458 2.8e-008 245 3 M6296_1.02 HOXB6 KKCATMAATCAWT 9.8e0000 1.3e-002 -4.33 0.0 278 488 276 415 0.56967 5.5e-005 243 3 M6331_1.02 MAFB WGCTGACDS 1.7e0000 2.3e-003 -6.06 0.0 346 492 468 598 0.70325 9.5e-006 245 3 M6333_1.02 MAFG MATGACT 1.2e-003 1.7e-006 -13.30 0.0 268 494 384 583 0.54251 6.8e-009 246 3 M6347_1.02 MSX2 TAATTNK 3.5e0000 4.6e-003 -5.37 0.0 196 494 270 557 0.39676 1.9e-005 246 3 M6353_1.02 MYF6 GCAGSTG 4.2e-001 5.6e-004 -7.48 0.0 96 494 156 568 0.19433 2.3e-006 246 3 M6355_1.02 MYOG YRACAGCTGCWGC 8.3e-006 1.1e-008 -18.31 0.0 92 488 169 558 0.18852 4.6e-011 243 3 M6359_1.02 NFE2L1 NATGACD 1.3e-005 1.8e-008 -17.83 0.0 246 494 368 584 0.49798 7.3e-011 246 3 M6375_1.02 NKX2-2 HAAVYACTTRAM 8.4e-002 1.1e-004 -9.09 0.0 113 489 173 532 0.23108 4.6e-007 244 3 M6380_1.02 NOBOX HTAATTRSY 6.9e-002 9.2e-005 -9.29 0.0 186 492 265 549 0.37805 3.8e-007 245 3 M6415_1.02 PDX1 CTAATTACY 1.1e-002 1.5e-005 -11.11 0.0 134 492 196 515 0.27236 6.1e-008 245 3 M6419_1.02 PKNOX1 HATCARTCAABYB 9.4e-001 1.3e-003 -6.68 0.0 246 488 337 564 0.50410 5.2e-006 243 3 M6427_1.02 POU4F2 MARCTCATTAATR 3.8e-002 5.1e-005 -9.88 0.0 126 488 183 507 0.25820 2.1e-007 243 3 M6440_1.02 PRRX2 YTAATTR 6.2e-002 8.3e-005 -9.39 0.0 194 494 275 552 0.39271 3.4e-007 246 3 M6510_1.02 TEF TGTTTATRTAAMTK 9.5e0000 1.3e-002 -4.36 0.0 241 487 317 548 0.49487 5.3e-005 243 3 M6513_1.02 TFAP4 RYCAGCTGYGG 1.7e0000 2.3e-003 -6.08 0.0 92 490 144 549 0.18776 9.4e-006 244 3 M6534_1.02 VSX2 WDAGCTAATTA 6.8e-002 9.1e-005 -9.31 0.0 190 490 241 482 0.38776 3.7e-007 244 3 M6559_1.02 ZNF589 CCMASGGKWWYWRCCS 3.9e0000 5.2e-003 -5.26 0.0 323 485 428 574 0.66598 2.2e-005 242 ## # Detailed descriptions of columns in this file: # # db: The name of the database (file name) that contains the motif. # id: A name for the motif that is unique in the motif database file. # alt: An alternate name of the motif that may be provided # in the motif database file. # consensus: A consensus sequence computed from the motif. # E-value: The expected number motifs that would have least one. # region as enriched for best matches to the motif as the reported region. # The E-value is the p-value multiplied by the number of motifs in the # input database(s). # adj_p-value: The probability that any tested region would be as enriched for # best matches to this motif as the reported region is. # By default the p-value is calculated by using the one-tailed binomial # test on the number of sequences with a match to the motif # that have their best match in the reported region, corrected for # the number of regions and score thresholds tested. # The test assumes that the probability that the best match in a sequence # falls in the region is the region width divided by the # number of places a motif # can align in the sequence (sequence length minus motif width plus 1). # When CentriMo is run in discriminative mode with a negative # set of sequences, the p-value of a region is calculated # using the Fisher exact test on the # enrichment of best matches in the positive sequences relative # to the negative sequences, corrected # for the number of regions and score thresholds tested. # The test assumes that the probability that the best match (if any) # falls into a given region # is the same for all positive and negative sequences. # log_adj_p-value: Log of adjusted p-value. # bin_location: Location of the center of the most enriched region. # bin_width: The width (in sequence positions) of the most enriched region. # A best match to the motif is counted as being in the region if the # center of the motif falls in the region. # total_width: The window maximal size which can be reached for this motif: # rounded(sequence length - motif length +1)/2 # sites_in_bin: The number of (positive) sequences whose best match to the motif # falls in the reported region. # Note: This number may be less than the number of # (positive) sequences that have a best match in the region. # The reason for this is that a sequence may have many matches that score # equally best. # If n matches have the best score in a sequence, 1/n is added to the # appropriate bin for each match. # total_sites: The number of sequences containing a match to the motif # above the score threshold. # p_success: The probability of falling in the enriched window: # bin width / total width # p-value: The uncorrected p-value before it gets adjusted to the # number of multiple tests to give the adjusted p-value. # mult_tests: This is the number of multiple tests (n) done for this motif. # It was used to correct the original p-value of a region for # multiple tests using the formula: # p' = 1 - (1-p)^n where p is the uncorrected p-value. # The number of multiple tests is the number of regions # considered times the number of score thresholds considered. # It depends on the motif length, sequence length, and the type of # optimizations being done (central enrichment, local enrichment, # score optimization).