******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 4.12.0 (Release date: Tue Jun 27 16:22:50 2017 -0700) For further information on how to interpret these results or to get a copy of the MEME software please access http://meme-suite.org . This file may be used as input to the MAST algorithm for searching sequence databases for matches to groups of motifs. MAST is available for interactive use and downloading at http://meme-suite.org . ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** DATAFILE= /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/KLF8.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/seqs-centered ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chr22:39520144-39520644 1.0000 100 chr12:56041719-56042219 1.0000 100 chr19:55082406-55082906 1.0000 100 chr17:28726422-28726922 1.0000 100 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chr12:53727356-53727856 1.0000 100 chr14:73027009-73027509 1.0000 100 chr17:59619547-59620047 1.0000 100 chr19:39341737-39342237 1.0000 100 chr5:37371070-37371570 1.0000 100 chr1:24744889-24745389 1.0000 100 chr1:36224005-36224505 1.0000 100 chr4:77075910-77076410 1.0000 100 chr14:103628805-10362930 1.0000 100 chr10:97687228-97687728 1.0000 100 chr12:121399705-12140020 1.0000 100 chr12:132828725-13282922 1.0000 100 chr12:52069581-52070081 1.0000 100 chr1:45521696-45522196 1.0000 100 chr1:228139955-228140455 1.0000 100 chr3:129121885-129122385 1.0000 100 chr1:183471795-183472295 1.0000 100 chr17:74514051-74514551 1.0000 100 chr19:35643407-35643907 1.0000 100 chr19:35758253-35758753 1.0000 100 chr19:41859514-41860014 1.0000 100 chr17:3890035-3890535 1.0000 100 chr19:58519475-58519975 1.0000 100 chr19:55643334-55643834 1.0000 100 chrUn_KI270467v1:2896-33 1.0000 100 chr10:5889838-5890338 1.0000 100 chr19:41884091-41884591 1.0000 100 chr19:46600818-46601318 1.0000 100 chr19:17337112-17337612 1.0000 100 chr17:77233792-77234292 1.0000 100 chr12:132305192-13230569 1.0000 100 chr19:1905015-1905515 1.0000 100 chr21:39313508-39314008 1.0000 100 chr4:731948-732448 1.0000 100 chr8:144580377-144580877 1.0000 100 chr19:35558010-35558510 1.0000 100 chr12:132304551-13230505 1.0000 100 chr4:731298-731798 1.0000 100 chr1:40257837-40258337 1.0000 100 chr17:43842299-43842799 1.0000 100 chr5:5422185-5422685 1.0000 100 chr1:153958492-153958992 1.0000 100 chr1:155244584-155245084 1.0000 100 chr8:37736321-37736821 1.0000 100 chr12:12266919-12267419 1.0000 100 chr19:40609837-40610337 1.0000 100 chr19:42280287-42280787 1.0000 100 chr22:41446615-41447115 1.0000 100 chr20:45972092-45972592 1.0000 100 chr17:42998040-42998540 1.0000 100 chr12:132303862-13230436 1.0000 100 chr19:41310152-41310652 1.0000 100 chr17:7242761-7243261 1.0000 100 chr17:17206306-17206806 1.0000 100 chr19:35628757-35629257 1.0000 100 chr19:17202202-17202702 1.0000 100 chr6:3118361-3118861 1.0000 100 chr19:44259625-44260125 1.0000 100 chr19:40444306-40444806 1.0000 100 chr19:39833871-39834371 1.0000 100 chr10:132752301-13275280 1.0000 100 chr21:46635786-46636286 1.0000 100 chr22:41468712-41469212 1.0000 100 chr16:89142383-89142883 1.0000 100 chr7:1011242-1011742 1.0000 100 chr19:49712290-49712790 1.0000 100 chr17:78558299-78558799 1.0000 100 chr1:234723900-234724400 1.0000 100 chrX:15737907-15738407 1.0000 100 chr17:7836700-7837200 1.0000 100 chr12:124914546-12491504 1.0000 100 chr6:169840248-169840748 1.0000 100 chr15:67254500-67255000 1.0000 100 chr3:9731298-9731798 1.0000 100 chr19:47778288-47778788 1.0000 100 chr19:1652609-1653109 1.0000 100 chr17:78140322-78140822 1.0000 100 chr19:1062951-1063451 1.0000 100 chr21:46264680-46265180 1.0000 100 chr19:7829780-7830280 1.0000 100 chr6:169840042-169840542 1.0000 100 chrX:1452896-1453396 1.0000 100 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/KLF8.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/seqs-centered -oc /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/KLF8.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/meme_out -mod zoops -nmotifs 10 -minw 5 -maxw 50 -bfile /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/KLF8.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/background -dna -revcomp -nostatus model: mod= zoops nmotifs= 10 evt= inf object function= E-value of product of p-values width: minw= 5 maxw= 50 width: wg= 11 ws= 1 endgaps= yes nsites: minsites= 2 maxsites= 600 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 global: substring= yes branching= no wbranch= no em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 data: n= 60000 N= 600 shuffle= -1 strands: + - sample: seed= 0 ctfrac= -1 maxwords= -1 Letter frequencies in dataset: A 0.178 C 0.322 G 0.322 T 0.178 Background letter frequencies (from /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/KLF8.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/background): A 0.180 C 0.320 G 0.320 T 0.180 ******************************************************************************** ******************************************************************************** MOTIF CMCCCCCVGCCMCGCCCMYYCC MEME-1 width = 22 sites = 337 llr = 2701 E-value = 2.5e-162 ******************************************************************************** -------------------------------------------------------------------------------- Motif CMCCCCCVGCCMCGCCCMYYCC MEME-1 Description -------------------------------------------------------------------------------- Simplified A 121212221114:2:::31212 pos.-specific C 656564522886a:aa955456 probability G 1221121461:::6::::2221 matrix T 11122221112::1::123221 bits 2.5 2.2 2.0 1.7 * Relative 1.5 * ** Entropy 1.2 * *** (11.6 bits) 1.0 ** *** 0.7 ******** 0.5 ********* 0.2 * *** * *********** * 0.0 ---------------------- Multilevel CCCCCCCGGCCCCGCCCCCCCC consensus A T G C A A ATTG sequence A T -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CMCCCCCVGCCMCGCCCMYYCC MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ---------------------- chr12:132159309-13215980 - 18 7.42e-09 CACGCCCAGC CACACCCCGCCACGCCCATACC TCCATGCCAG chr19:6530686-6531186 - 35 4.04e-08 CACGCCCCTC CGCCCGCGGCCACGCCCCTTCC CAGCCCAGAG chr10:102114816-10211531 + 19 4.04e-08 GTGGAGCTGC CCCCACCGGCCCCGCCCCCTCC CTGAGAGGAA chr20:62598640-62599140 - 52 5.48e-08 CACGCCACAC CACACCCAGCCACACCCAGCCC AACATAGCCA chr19:33521596-33522096 - 37 1.29e-07 CTCCATGCCC CGCCCCCTGCCCCGCCCTTACC CCGCCCCATG chr8:144580377-144580877 + 77 1.68e-07 CAGTCCCGCT CTCACGTGGCCCCGCCCATTCC AC chr19:7871843-7872343 - 17 1.68e-07 ACCCTCCCCT CTCCACCAGCCACGCCCCCCTC GCAAGTTCCA chr19:6677836-6678336 - 52 2.18e-07 CCCGACTGCC CCGCCCATGCCACGCCCACACC ATTGTCACGC chr6:3258622-3259122 + 52 2.80e-07 CGGGATCGCC CCTCCCCGACCACGCCCCTCAC CCCCGCCCTT chr19:5686881-5687381 + 20 3.57e-07 TCCACCCGTC CCGCCCCAGCCACGCCCCTCCT AGCCCAAGCC chr19:17209582-17210082 - 36 3.57e-07 AGGTCCTGCC CACCCAAGGCCCCGCCCACCAA GACCCCACTC chr6:169840042-169840542 + 33 4.53e-07 caccagaacc cactccacgctacacccacacc acgcccactc chr21:46635786-46636286 + 18 4.53e-07 cgtccagcgc cttctacggccacgcccacccc accaccatct chr19:39125758-39126258 - 32 4.53e-07 TGACCTTTGA CCCCGGCGGCCCCGCCCCCCTC CTCGCGGAAA chr1:24744889-24745389 + 65 5.71e-07 TTTGTACCGC CCACCAAGGCCACGCCCCCTAC CAGCTGTGGG chr19:34134249-34134749 - 7 5.71e-07 AGCCCCACCC CAGCCGCGGCCACGCCCCTCGC CGCGCC chr20:44885235-44885735 + 2 5.71e-07 C CACCCCCAGCTCCGCCCTCTCT CCTCCCACCT chr1:227787848-227788348 - 22 5.71e-07 TAACCCCGCC CCCGCCTGGCCACACCCACAGC CCCTCCCTCG chr17:17206306-17206806 + 40 7.16e-07 CCCATGGCCA CACGCCAGGCCACGCCCCCGTC ACGCCCCACC chr21:45500575-45501075 - 14 7.16e-07 ACACCCAACA CACACCAAACCACACCCCCACA CTACACACCC chr13:110705983-11070648 + 10 7.16e-07 ccgcccacg cccttggggccacgcccactcc cGGAAGCAGT chr6:87155166-87155666 + 20 7.16e-07 GTTTTCCGCA CCGCCCCAACCCCGCCCTTCTC CTTTCCCCTT chr19:49712290-49712790 - 78 8.91e-07 C CCTATCTGGCCACGCCCCTCAC TCGTCTCACC chr20:63350817-63351317 + 71 8.91e-07 tccacaccca cgcccactgccacacccatgcc cacgtcca chr7:892965-893465 - 58 8.91e-07 CACTCACCTG CACACACCACCACGCCCACGCC CAACACTCAC chr9:136342680-136343180 - 68 8.91e-07 CCAAACCCAC CAGCCTCTGCCACGCCCACCGC CCCCATGGAC chr2:241881425-241881925 - 53 8.91e-07 TTAGTCTCCT CGCTCGTGGCCACGCCCCCTGC ACGGCCCCCT chr10:132752301-13275280 - 35 1.10e-06 TCCACGCCAC ACCTCCTCGCCACGCCCCTCCA CGCCACACCT chr6:3118361-3118861 - 78 1.10e-06 A CGCCCTCTGCTCCGCCCACCTC GCCTCTCCAT chr5:665553-666053 + 56 1.10e-06 CCTCAGACCC CACACCAGGCCACGCCCTCCTG ACCACGCCTC chr12:121839382-12183988 - 11 1.36e-06 GCGGACTCGG CCCCCAAGGCTCCGCCCACACT GACCACGCCC chr19:16111386-16111886 + 9 1.36e-06 GCGGGGGC CACATAATGCCACGCCCCCGCC TCGTCCCCAT chr12:121888467-12188896 + 44 1.67e-06 CCCTAAGCCC CATCCCAAGCCCCGCCCCTTGA CTGTTCTCGC chr8:12194038-12194538 - 4 1.67e-06 ATCCTGGCCC TACCCCAGGCCCCGCCCTCCTA ACG chr10:75235214-75235714 - 37 1.67e-06 GAAGGGCCAG TCCCCCAGGCCACGCCCAGAAC CGCGCCCCTG chr19:1122965-1123465 - 21 1.67e-06 TCCACCCAGG CATTCCTGGCCACGCCCATGAC CCGCCCAACG chr2:130727472-130727972 - 31 1.67e-06 CGCCCTCCAT AGCCCAAGGCCACGCCCATCAC AGCCAAAGAC chr4:4672969-4673469 + 48 2.04e-06 ACGCCTACCC CCTCCCTGACCACTCCCATCCC TATAGGACTA chr19:40716784-40717284 + 72 2.04e-06 GGGAGTCGGG GCTCCCCAGCCACACCCCTCGC GGGATTT chrX:135098719-135099219 + 73 2.47e-06 ACCCGCCCTG CATTCTCAGCTCCGCCCACCGC CCGGTT chr16:89142383-89142883 + 15 2.99e-06 GACACAGCCA CACCTGCAGACACACCCACACC TGCAGACACC chr1:225777505-225778005 + 22 2.99e-06 TCGAGCCACA CGCCCTGGGCTCCGCCCACTCC CTGACAACAT chr21:45287692-45288192 + 69 2.99e-06 TAGCCACGGC AACGCCCAGCTCCGCCCTCCCC GCGCATGCGT chrX:1452896-1453396 + 23 3.60e-06 CCATTGATCT CCCCTGAGACCACGCCCAGACC ACGCCTCCAT chr21:39183371-39183871 + 22 3.60e-06 GCACACCCTG AGCTCGCGGCCACGCCCTCTAC ACCGCCCGCC chr16:11742710-11743210 + 34 3.60e-06 GCACCGACAC CGCCCAAATCCCCGCCCCCAAC GGGCCACGCC chr12:132305394-13230589 + 38 3.60e-06 CGGGCACACC CTCACCCGGACACGCCCTCGCC CGGGCACAGC chr5:132963497-132963997 - 21 3.60e-06 GCCCAGCCGG CCCACAGACCCCCGCCCCCTAC TCCCCCAGCG chr7:1011242-1011742 + 14 4.31e-06 cacgcccaca gacacccagacacacccacacc cagacacacc chr22:31970564-31971064 + 8 4.31e-06 GTAGCCC CGCCCTTGACTCCGCCCACTTC CCCAGCCCCT chr12:131224380-13122488 - 68 4.31e-06 GCTCCTCCCC TCACCCTGGCCCCACCCCTATC TCCACACCCA chr19:49363414-49363914 - 63 5.15e-06 CCGTGAGTTC ATTCCCTGGCCACGCCCACACA GTCAGACCAC chr19:55081336-55081836 - 18 5.15e-06 ACGCCCGTCC CGCAGCCGGCCCCGCCCTTCCA CGCCCTAGCC chr19:7870607-7871107 - 29 5.15e-06 GCACCACCTT CGCCATTGACCACGCCCCCTCC GGAGACGCCC chr3:88058893-88059393 - 67 5.15e-06 GGCTGGGCTC TACTTCCGGCTCCGCCCACCCA CGCCCCCAGT chr17:48025112-48025612 - 21 5.15e-06 CACCCCGGCT CCACCCCGGCCCCGCCCCTGGA GTGCGCTGAG chr4:731298-731798 - 19 6.12e-06 CGCCCTACAC CCCTGAGGGCCACGCCCACCCA CGAGGGGACA chr20:63941591-63942091 - 63 6.12e-06 TGCATCACCC CCTTTCCTGCCCCGCCCCATTC CCTGCCCCTG chr21:37267326-37267826 + 33 6.12e-06 AAAGACGGGG CCAAGCTAGCCCCACCCCTTCC GTAGGGACAG chr5:180810315-180810815 - 21 6.12e-06 CGTCCTCGCC CCTCCCAAGCTCCGCCCAGCAC CCCAAGGGCC chr6:169840248-169840748 + 11 7.25e-06 actccacact acacccacaccacgcccactcc acatcatgcc chr12:132303862-13230436 + 50 7.25e-06 CAGACACAGC CTCACCCGGGCACACCCTCTCC GGGGCACACC chr19:40609837-40610337 + 7 7.25e-06 CCAGCC TCCCTTTGACCCCACCCCTACC CAGCTCCCAA chr12:132304551-13230505 + 33 7.25e-06 CGGGCACACC CTCGCCCAGACACACCCTCACC TGGGCACACC chr19:54190030-54190530 - 64 7.25e-06 CCGCGCCACG CGCTCCTTGCTCCACCCCCTCA TGCCGACACC chr17:48998065-48998565 + 2 7.25e-06 C CACGCCCAGCCCCTCCCTATCC GCCGGTGGAC chr12:132305192-13230569 + 16 8.55e-06 GGGGCACACC CTCACCCGGGCACACCCTCACC CGGGCACAGA chr12:56079839-56080339 + 66 8.55e-06 ctctctctct ctcacacacacacacccctccc ctgccatccc chr8:10839707-10840207 - 25 8.55e-06 CCCAGGTTGC CCCGCCCTGCTCCGCCCCCTCG CCGCCGCGTG chr4:1566450-1566950 - 12 8.55e-06 CCTGTGACTC CCGCCAAAGCCACACCCACCTG AAGCCACACC chr5:173056977-173057477 - 49 8.55e-06 ATTAGTGGCC CCCCCGCGGCACCGCCTCCCCC ACGCCCATTG chr1:32817214-32817714 - 71 8.55e-06 CCGCTCAG GCGCCTCAGCCCCGCCCTCCGC ACCGCCCACC chr22:19432102-19432602 - 24 8.55e-06 TCGGGGTCCT CCCTTCCGTCCCCGCCCTGTGC TGGGAGCGCG chr17:28726422-28726922 + 1 8.55e-06 . CCGACACGCCCACGCCCCCTAA GTCCTGGTCC chr17:78140322-78140822 - 9 1.01e-05 AGACCACGAC CTCCAAGGGCCCCGCCCCCAAC GCACCCTG chr19:16628452-16628952 - 76 1.01e-05 CCC GCCCTGCCACCACACCCATTCC CACACCCTCT chr19:35899516-35900016 - 36 1.01e-05 CCGAGCCACC TCCTCCCGCCCCCGCCCCGCGC AATCCCCACT chr22:21629834-21630334 + 26 1.01e-05 GTGGGCCGGA CAgcccaggccccgcccccgga cgctgcccgg chr9:135189420-135189920 + 12 1.01e-05 tgccacaccc cccatcatgccacaccccacta ctccCTCATG chr1:159924397-159924897 + 7 1.01e-05 CCCCCA CCCCCACGACCACACCCTGGGC CGTTACAACA chr14:24299545-24300045 - 17 1.01e-05 GGGTGTGTCA CCCAGATCGCTCCGCCCCCATC CGCAGGTTCT chr10:101569970-10157047 + 59 1.01e-05 ACCCTtccgc cccaccccactccaccccactc cactctcacg chr19:48170239-48170739 - 5 1.18e-05 CGCCCCACTT CACCCCTTTTCCCGCCCTCCTC CCAT chr19:43463548-43464048 - 49 1.18e-05 GGCCACGCCC CATCTGAGACCACGCCCACAGC TAATCCCGCC chr19:49659763-49660263 + 51 1.18e-05 cacacacaca cacacacacacacacCCCCTGC TGTAACTGAA chr17:50866455-50866955 - 50 1.18e-05 CCGGGCGTCA GCCGCCCTACCCCACCCCTTTC TCTCTCATTG chr22:36387963-36388463 + 35 1.38e-05 ATTCAACATC CTCTTTCCGCCCCACCTCCACC CGCTCCACCT chr8:18083966-18084466 - 32 1.38e-05 CCCCGTCCTC TCCTCCCAGTCCCGCCTCCTCC GAGCGTTCCC chr19:36115404-36115904 - 64 1.38e-05 CCGGACCCCG CCCCCATGGCCACACCTTGAAC TCAGCGATGG chr4:731948-732448 - 58 1.60e-05 CACCCTACGC CCCTAAGGACCACGCCCACCCA CGAGGGGAGG chr1:7770941-7771441 + 62 1.60e-05 ACGCACCCAC CCACGACGCCCCCGCCCACTTC CGGCGCGCCC chr20:31572735-31573235 - 11 1.60e-05 CAGGGGCAGG CCCCTGAGGCCCCGCCCCTGAT AGCCATTTGA chr5:75511589-75512089 - 21 1.60e-05 CAGCACAGCT GCATCCCTACCCCGCCCTCTCC TTTCTCCGCT chr19:40623896-40624396 + 74 1.60e-05 CGGCCACGCC CTCCGAAGGCCACGCCCCATGC TCCTG chr1:244450952-244451452 - 29 1.60e-05 CCCCATCACC GCCCCCCCGCCCCGCCCAGGGC GGCGGAGTGG chr12:121399705-12140020 + 41 1.86e-05 CCAGGAGGAA CGCCAGAGGCCCCGCCCAATCC CTGTCGCTTC chr4:82373988-82374488 + 60 1.86e-05 GGCTAGAGGG GCCCCCTGCCTCCGCCCCCGCC CTTCCGAGGA chr19:49640531-49641031 - 40 1.86e-05 GAATGCAGTG ATCTCACGGCCCCTCCCTGCCC CGTTACCCTG chr14:30621986-30622486 + 48 1.86e-05 ACTCAGGCAC ACCCTTTGGCCCCGCCCTTCCG GGCTTTGCTT chr19:40444306-40444806 - 2 2.15e-05 CTCCACCCCG GAGTCGCTGCCCCGCCCCCTGC C chr19:1905015-1905515 - 17 2.15e-05 ACTGCGCGCC GCCGCCTCGCCCCGCCCCGCTC CGGCACTGCG chr5:37371070-37371570 - 64 2.15e-05 CTCACCCTAT CCAACCCCATCCCGCCCCTCTC CTTCCCTGTT chr12:53727356-53727856 - 24 2.15e-05 CCGTCACGGA CGCCCTCTTCCCCGCCCTCCTT GCGCGCAGCC chr19:47112068-47112568 + 17 2.15e-05 atcgagagaC ACCCACCGACCCCGCCCTtcct cctcctcctc chr10:75234105-75234605 - 15 2.15e-05 TGGGCACCTC CCTCCAAGACCCCGCCTCCCGC CCGGGCACCT chr10:31032187-31032687 + 7 2.15e-05 GCGGCT CCCGCTAGACTCCGCCCAGACC CCGAGCAGTC chr17:48908108-48908608 - 36 2.15e-05 CGGTGCTGGC TCCGCCCACCCCCGCCCCAACC AGCGAGAGGC chr1:35031570-35032070 + 5 2.15e-05 CTCC GCCCCGCCGTCCCGCCCACTAC CACTGCGGCC chr7:100436234-100436734 + 19 2.15e-05 CTGGCTGCCG CCTCCTTTCCCCCGCCCCTCCT AGACGCCGCT chr19:36214330-36214830 + 55 2.15e-05 GGCTCCGGAC ACGCCCCGGCCCCGCCCAGGAC TCCCAGACCC chr16:3158548-3159048 - 55 2.15e-05 CGCCTTCACT CCACCCCTACCCCTCCCCGCCC GGGTCCCGGC chr17:43842299-43842799 + 36 2.47e-05 cccctctctc cacgcctctccacgcctctctc cacgcctctc chr17:43842498-43842998 + 1 2.47e-05 . cacgcctctccacgcctctctc cacgcctctc chr19:33795463-33795963 - 33 2.47e-05 TCCTCCTTTT CTCCCACTCCCACTCCTCCTCC CCTTCCTCTT chr19:35879732-35880232 - 1 2.47e-05 CCTATCCCTG GCCTCTGAGCCCCGCCCCCGGC chr7:100874780-100875280 + 65 2.47e-05 TCCCATCACG CCCTGCTCTCCCCGCCCTTCGC GCTCGGTTTG chr16:11256335-11256835 + 14 2.47e-05 CCTCTTGGGA CGCGCCCTGACACACCCTCCTC CGCCCCAGCT chr19:1062951-1063451 + 20 2.84e-05 GGCTCCACCC ACACCATGGCCCCGCCCCATAC TCATGCTGGC chr16:29805289-29805789 - 34 2.84e-05 TCCTGCAGGC CACCGTCCTCCCCGCCCCACCC CAGCGGTGTA chr6:108558332-108558832 - 56 2.84e-05 TCACTCAAGT GACGCGCGGCCCCGCCCCTGCA CCAAGCTAGT chr20:33709959-33710459 + 21 2.84e-05 CTCCTACCTC TATACAGAACCACACCCCTTCC CCCACTCCCA chr19:47483961-47484461 + 20 2.84e-05 TAAGCACCCT CTCCGCAGCCCCCGCCCCAACC CGCACTACCC chr19:38506883-38507383 - 57 2.84e-05 GGTCCCGCCT GTGCTTAAGCCCCGCCCATTTC GAACTCCTCC chr1:27383222-27383722 - 24 2.84e-05 ACCTGGCCGC GCACACTAGCCACGCCCCTAAC TGGCCCCGCC chr15:72783550-72784050 - 62 2.84e-05 GTCCTGGCGC CGCCCGTCGCCCCGCCCCTTGG GGGGCCCCGT chr2:109613968-109614468 - 64 3.26e-05 CCGCTCCCCG CTGTCTCGGCCACACCTACCTA GGGCGGCCTC chr20:56468297-56468797 + 62 3.26e-05 cgcctagcgt gccgccccgccccgccccgcta cgccacgacc chr2:241541182-241541682 - 9 3.26e-05 GCCCCGCCCC TCCCAGCGGCCACGCCCCAACA ACCACGCC chr12:6493032-6493532 + 37 3.26e-05 CTGTGGGCGC ACCGCCCACCTACGCCCCATCC GCAACAGCCA chr17:38559295-38559795 - 48 3.26e-05 GTCCTGGGCC CCGCCCCACCAACGCCCACCTA CTGGTAGAAG chr1:25819721-25820221 - 60 3.26e-05 GGACTCTCTC ACCTCACGGCCCCTCCTTCCAC CTTGGGCCGC chr3:129121885-129122385 + 49 3.72e-05 CCACCTCAGC CCTCCCCGACTCCGCCTTCAGC CCGACCTCGA chr1:31938377-31938877 + 63 3.72e-05 GTCGCTCGCC CACGCTGCGCCCCGCCCATCCG CACCTGGGCT chr19:51367471-51367971 + 64 3.72e-05 CTCTGAACTC TGTCTCGAGCCCCGCCCACCTC TCTCGGCTTC chr17:18039195-18039695 - 10 3.72e-05 AACACACAAA CACACACAGACACACACACACC CCGCCCCTT chr1:153958492-153958992 + 79 4.24e-05 CTTGGCTCCA CCCTCTCGGCTACTCCCTGAGA chr14:105490678-10549117 - 27 4.24e-05 ATCGTCACGA CACCCGACACCCCGCCTCGCTC AGACCCCACC chr7:158084723-158085223 + 13 4.24e-05 CCACACCCTC GACGCCCATCCACACCCACGAC GCCCATCCAC chr19:33080891-33081391 - 76 4.24e-05 TGC TCTTCCGGGCCCCGCCCCCTCG CTACGGCGGC chr2:197499753-197500253 + 21 4.24e-05 TGCACACCCT GCGCGCGAGCCCCGCCCCTCCC TACCCGCGCA chr3:11846637-11847137 + 46 4.24e-05 GCAGAGCTTC CGTCCCTTGCTACGCCCCACGC ACGCACAGGC chr21:46264680-46265180 + 71 4.82e-05 GGGACATGCC CACTCCAGGCCACACCCAAGGG GACACACC chr17:7836700-7837200 + 17 4.82e-05 GGCTTCCTCC CCCTTCTATTCCCTCCCACCTC TGCCCCGAGT chr19:58519475-58519975 + 52 4.82e-05 CAGGGGGATG CCCATTCGACCCCACCTCCGAC TCCTCTTCAG chr19:39341737-39342237 - 46 4.82e-05 GCGTTCCAGG CCTCCTCTTCCCCGCCCCTTGG GTGGCCCGCC chr9:85743205-85743705 + 63 4.82e-05 GGTAATTAAG AACTTAGAGCTACTCCCCCACC CCCTGGGAAT chr4:37686403-37686903 + 21 4.82e-05 CCATGGACAC GCCCTCTTTCTCCACCCACCTC AGCTTGGCCC chr10:74825734-74826234 - 3 4.82e-05 CCGGAGCGTT CCATCCCGCCCCCTCCTCCACC CT chr1:156740889-156741389 + 15 4.82e-05 CTCAGCGTCC CCTCCCCCGCCACGCCCGTCGA CTTTCTGGGA chr10:69123867-69124367 - 56 4.82e-05 CTCCCTTCCT CTCCCCCACCCCCGCACCCGTC CCTCTCCCAG chr1:244970534-244971034 + 17 4.82e-05 CCGCCCTCTT CACCCTCTTCCCCTCCTCCCGC CCCGTCCTCC chr19:58408243-58408743 + 57 4.82e-05 cgaaagccga cgccggaagccccgccccacgc AGGGCCCGCC chr14:22871491-22871991 - 25 4.82e-05 GGGCGGGTGA CAAGCCCGGTCCCACCCCTGCC AATCAACGCA chr5:139273804-139274304 + 39 5.46e-05 AGGGCCCCGC CCACCGAAGCCACGCCCAGTAG CCGCCCCGGG chr21:42974012-42974512 + 40 5.46e-05 GGCAAGACGT GCGCTGAGGCCACGCCCCTACT GCATAGTCAT chr6:5003558-5004058 + 22 5.46e-05 CTCCGCGTAC CGCCGGCGGCCCCGCCCCGCGA AGCCTAGCAC chr17:51121661-51122161 - 4 5.46e-05 GACTTATTCA CTCCAGTGACTCCACCCCTTAC CTC chr12:6765973-6766473 + 48 5.46e-05 CTCGCTTTCA TCCTCCTATCCCCACCTCTCCA ACCTCCTCTT chr14:23285904-23286404 - 11 5.46e-05 CGCCCACCCC ACCCATCCGCCCCGCCTCCAAC TTGCTCGAGC chr22:41446615-41447115 - 69 6.17e-05 AGTCCCGGCC GGGCCCTGGCCCCGCCCCTGCA GGGCGGAGGG chr10:72625882-72626382 + 11 6.17e-05 GGAGACAAAC CTCCACCCCCTCCGCCCACTCT CACGTGACTC chr1:185156981-185157481 - 45 6.17e-05 CCCGCCTCCC AACACACACACACACCCCGCCC CACCAACTGT chr12:57546998-57547498 + 46 6.17e-05 CGCGAGAACA GCCCTGCTGCCACACCCCTGGA GAGGCCGGGA chr19:38196245-38196745 - 2 6.17e-05 TCTGCCCTTG ACCTCCACACTCCGCCCTTGAC C chr17:58417399-58417899 - 24 6.17e-05 GAGTGGTTGC CTCTAGCAGCTCCACCCTCACT TTGTCAGCAG chr8:1823310-1823810 - 2 6.17e-05 CCCTAACCCT CTCCCAGAGCACCGCCCTTTCT G chr19:45092705-45093205 + 16 6.17e-05 GGAGACGGCG TCTACTTCGCCCCGCCCCTCAT AGTCTGCAGT chr10:17228328-17228828 + 14 6.17e-05 ACCGCCGGTG ACTAAGCGACCCCACCCCTCTC CCTCGGGCTT chr14:91510382-91510882 - 19 6.17e-05 GCAGAGGCCG CAAACGTATCCACGCCCCTCGT GCATCCTGGA chr15:67254500-67255000 + 44 6.96e-05 AATGACCAGG CTGGCCTGACCCCGCCCCTAGA CCCCCTTCCG chr19:35931416-35931916 - 10 6.96e-05 TCCAATGTGG AGGCAGAGGCCACACCCACTCC TAGCGCGCC chr5:10353477-10353977 + 16 6.96e-05 TCGCCCCTAG GTGTTCCCGCCCCTCCCCCTCC CGTGTCGCTC chr1:29230719-29231219 + 46 6.96e-05 CAGCGACCGC GCGCCTGCGCCCCGCCCCTGCC CCGCCGGGTG chr12:57752212-57752712 - 63 6.96e-05 CACGTGGCTG CCATCGCCCCTCCGCCCCCTTA CACTCTTCGC chr20:33993046-33993546 + 7 6.96e-05 TAGCCA CCCCCGGGGCCCCTCCTCCCCT CCCTGCTTCC chr16:68244996-68245496 - 48 6.96e-05 AATAGGGACT CGCCGCCATATACGCCCCTCCC AGTCGGAGGT chr7:42237309-42237809 + 70 6.96e-05 cttcctcctc ctccccgcgctcctcctccccc AAGTTTTAA chr10:67884310-67884810 - 72 6.96e-05 CCCGCCC CATCGCCGCCCCCGCCCTCTCG GCGCTCCCGC chr20:3811632-3812132 - 61 6.96e-05 GAGGCCCAGC CACGTGAGGCCCCTCCCTTCCT GCTGCCCCAG chr7:2314404-2314904 + 8 6.96e-05 TAGCCAC GCCCACATGCCCCTCCCCGTCC ACGTGGACAC chr1:114716560-114717060 + 42 6.96e-05 GCGCCCCAGG CGCCTGAGTCCCCGCCCCGGCC ACGTGGGCCT chr21:28992690-28993190 + 63 7.83e-05 TTTGCTGCCC CACTTCCGCTCCCGCCTCCCGC TGTGTCCCTG chr1:25998121-25998621 + 61 7.83e-05 TCCCGTGCGT AACCCTCCGCCTCACCCTCCTC AAATAGTCCT chr6:149963654-149964154 - 28 7.83e-05 TTGGGGATGC TCCACCCCGTCACGCCCCGGGC TCGTCATCTG chr16:29806528-29807028 + 72 7.83e-05 CCTTCCCGCC ACCTCAGGGTCACGCCCAGAAC CCCCTGC chr3:48446407-48446907 - 31 7.83e-05 AGCGCGCCGC CACACCCGGCCCCGCCCGGTGT TTAGAGGTCC chr19:17215163-17215663 - 15 7.83e-05 CCATTATCGC CCGGCCCTACACCACCCCTTCC GCCGGCTCCA chr19:10565853-10566353 + 4 7.83e-05 GGC CGCCCTCAGTCCCGCCCGCATC CACTTGTAAA chr19:39308384-39308884 + 13 8.79e-05 CACGCCCCTT CGCTTTATGCCCCGCCCATGGT GAACAGTGGG chr19:40798677-40799177 + 65 8.79e-05 CGCCCCCTCC CAGACCCGGCCCCTCACACTGC GTTCCCCCTC chr19:680693-681193 - 29 8.79e-05 TTCCATCATG CCCCTCTGGTTACACCCACAAG CCCCTCTCTG chr19:17337112-17337612 + 70 9.84e-05 CCCGGGGAAC AACATTTCGCTACACCTACCTC CATACCGCC chr12:1907471-1907971 - 65 9.84e-05 CACCAGACAC ACCCACCAGACACGCCCACCAG GCACGCCCAC chr19:39480493-39480993 + 57 9.84e-05 CTCTCTCGGG CTTCCGTCCACCCGCCCCTCCC CCGCGTTTCC chr12:121799718-12180021 - 54 9.84e-05 TCTCTCCCCC AACGCCCTGATCCGCCCTCCAC CTTCCTCTCC chr21:39312318-39312818 + 20 9.84e-05 GAATGGCTGG CTGCGCACGCCACACCCCCGCA GAGGCGGCCG chr1:229508141-229508641 - 59 9.84e-05 ACCGCCCTTA ACGTCACGATCCCGCCCCCGCC AGCGCTCCGA chr1:234723900-234724400 - 36 1.10e-04 CACCTCCCTC CTCCCTTCCTCCCTCCCTCTCC CTCCATTTCT chr19:35558010-35558510 - 3 1.10e-04 AACCCCACCC CATCTCCCGCTCCGCCTATGGC CC chr1:228109113-228109613 - 70 1.10e-04 TACATCACG CCGCGCCGGCCCCGCCCAACAG GGGCGTATAT chr21:25607279-25607779 + 21 1.10e-04 CCGTCGCGCG CAAGTCCTTCTCCGCCCTCCTC CCCCGGAAAC chr9:135188516-135189016 + 63 1.10e-04 CTGTGCCGCA CCTACCATGTCACACCTATGCC ACACACACCA chr6:31547286-31547786 + 34 1.10e-04 GGGGCGGAAC GACATCCGGTAACGCCCCTCAC AGTTCACTTC chr5:40835067-40835567 - 49 1.10e-04 TACCGCATCC TCCTCTTGACCCCACCTACACT ACGACGACGG chr19:57240392-57240892 - 63 1.10e-04 CAGGGAGGCG GCCACGGAACACCGCCCCCTCC CTAGAGCCGG chr18:74495928-74496428 - 15 1.10e-04 TCTCCCAGCT CCATTTCCGTCCCGCCCACCAA TCCCGGCCTG chrX:15737907-15738407 - 40 1.22e-04 TCCGTACTTA TTGCCCCGGTCACGCCCAACCA AACTGTGCCA chr6:37169503-37170003 + 72 1.22e-04 ACCCAGCTCC CGCCTCCCCTCACGCCCCGCGC CCCTCCC chr3:15860077-15860577 - 11 1.22e-04 CTCATCCCAC TCCTTGGCTCCCCACCCTCCCC AAACCCAGGG chr19:38402888-38403388 - 74 1.22e-04 GCCCC CTCCCACGCTTCCGCCTTCACC GCCTCCATGA chr1:31937439-31937939 + 57 1.22e-04 ACTGCCTCCC GACGCGCTCCCACTCCCCCCAC CTCCTCGCAC chr22:20496057-20496557 + 14 1.22e-04 cttactcccc ccctctcattccctccctcctt cactctctca chr1:225428014-225428514 + 7 1.22e-04 GCCGTG GCGCGTCCGCCCCGCCCCACCC TGCCTGGGGG chr1:156705880-156706380 - 70 1.22e-04 GTGGGGGGA CCGTGCCGCCCCCGCCCAGCCT CTCCGAGTTG chr8:37736321-37736821 - 14 1.36e-04 TCACGCGAGA AGACCACACCCCCGCCCCGCGC TCGCTCTGCG chr14:23306553-23307053 + 74 1.36e-04 ccctcccttc ctccctctctccctccctcccA GCTCC chr19:45769265-45769765 - 37 1.36e-04 CGAGCGGGCC ACCCGGAGGCACCGCCCCCGCC CAGCTGTGGC chr9:131502743-131503243 - 15 1.36e-04 GAGGCCGCTC GGCACTCCGCACCACCCACCGC CCTGCTCAAC chr5:178153774-178154274 - 69 1.36e-04 TCCGCTCCGC CCTAATCGGTTCCGCCCAGTCC CTTGGTCCGG chr6:79078069-79078569 + 71 1.36e-04 CCCCGGCTCT GGCCCGCGCCCCCGCCCCCCGG CGCTAAAA chr9:121074946-121075446 - 35 1.36e-04 CCAATTCCCA GACACGCGCCCCCGCCCCGAAT CCATCCCAAG chr22:39520144-39520644 + 54 1.36e-04 ACTCCTTTTC TCGTCACAGCTACGCCCTGGGC ATAAACGGTT chr1:228139955-228140455 - 42 1.51e-04 TGACGTCATG AGGCGACTGCCCCGCCCATGTC TCACTCGTTC chr16:30923121-30923621 + 2 1.51e-04 T CCCGGCTGGGCACGCCCTCCGC CGTCCTGTTT chr19:45770478-45770978 + 20 1.51e-04 CTCCTGGGAC TCGCCCCGCCTACGCCCATAGG TGGGcccgca chr20:326980-327480 + 25 1.51e-04 CCCTCCTCGT GGCCGGAGGACCCGCCCCCTCC TTTGCTCCGG chr7:105012476-105012976 + 38 1.51e-04 GCCCAAGCCC TGTCCCCTCCCCCGCCCCGGCC TGGGTCGGAG chr12:50167277-50167777 + 46 1.51e-04 GGGGACCGCC TCCGGGGATCCACGCCCCTTCC CGAGCCTCTG chr21:33491442-33491942 + 68 1.51e-04 CCCGACCGGG GACCACCAGCTCCACCTCCGTC CCCGCCCCGA chr19:55643334-55643834 + 56 1.67e-04 TTTCGCGACG GCCCGGGCGCCCCGCCCCAACC TTCCTTCCCT chr10:97687228-97687728 + 2 1.67e-04 C CACCGCCCTCTCCGCCCCCGCG CGGCGCCCGA chr10:87845991-87846491 + 77 1.67e-04 GAGCTGTTTA ATCTCCCTTCCACTCCCAGCAA GT chr20:324231-324731 + 76 1.67e-04 GTGAGCCGGG AGcgcgcggcccctccccgcca cgc chr1:38859666-38860166 - 48 1.67e-04 CGGGCCGCCC TCCTCGTGACTCCTCCTCCCCC CTCCGCGGCT chr9:127771247-127771747 + 57 1.67e-04 GGGAAGGCCT CGCCCCCTAGCACACCCCTCCG CCTCGCCCGC chr6:87322336-87322836 - 48 1.67e-04 CCTCTCCTCG CCCGAGACGCCCCGCCCCGCTT CGCCGCCCCG chr15:90994507-90995007 - 7 1.67e-04 AGGCGCAGGC CACGCCCGGCCACTCACAGACA GTGACG chr2:48314203-48314703 + 7 1.67e-04 TGCTTT CCGTGTGAGCCCCGCCCTTCCG GACCCTGCAT chr10:119725664-11972616 - 9 1.67e-04 CCCGGGTGTC TCCTCCCAGCTCCTCCCCGCGG GTCTTTCC chr19:17202202-17202702 + 6 1.85e-04 cacac ccacccatgccctgcccatacc acagccactg chr22:41448096-41448596 + 53 1.85e-04 GCCTGAGCGC CCCCCCATCCCCCACACTCTGA GCGTCGCAAC chr4:6595859-6596359 - 72 1.85e-04 CACGCCC ACCTGGATACCACGCCCACCTG GACACCACGC chr5:116574672-116575172 + 20 1.85e-04 TCGGACTCTC CTTCCGCAACTCCGCCTACTTT GGCTGGCGTC chr10:5889838-5890338 + 66 2.04e-04 CGTTAGTGGC CGTCCGTCAGCACGCCCCCTCC GGTCTCGCGT chr19:8389860-8390360 + 57 2.04e-04 TCATTCCTGC AGTCTTCCGCCCCGCCCTCTTG AGCTCGCCCC chr1:225999200-225999700 - 64 2.04e-04 GTTCCCCTCC CCCAGCCCGCACCGCCCCGCCG CCCGGCTCAC chr17:8138746-8139246 + 79 2.04e-04 tccagccggc tccgcccggctccgcccggctc chr8:630793-631293 + 34 2.04e-04 CTGACTCACA CCCTCCCGTGACCACCCACCAC CCACATTGAC chr6:26171753-26172253 + 36 2.04e-04 ACGTTACGCC GCCGCCCCGTTACGCCCATCCG GCTCCCGCAT chr5:181246155-181246655 + 22 2.04e-04 TTCCACAGGG AGTCCAGGTCCCCACCCACGCC CAAGGGAAAG chr19:1490558-1491058 + 40 2.04e-04 CTGCCTCCTT TGTGATCAGCCCCGCCCTCCAC TGGTCTCGCC chr19:38336071-38336571 - 62 2.25e-04 GCCCCGTCCC GCCCTCTGGTAACGCCCCTCCT CCTCGCCCTG chrX:153971827-153972327 + 49 2.25e-04 ACCGGGCGAG CCTCCACGCCTCCGCCCTGGGA GCCGCCATCT chr19:37594296-37594796 + 18 2.25e-04 AGGAACACAA CTAGCAGCACCACACCCCCGCC ACTGCCAGAA chr12:12724541-12725041 + 46 2.25e-04 CACCTGGGCC ACACCCTACGCCCACCCACCCC CTCTCAGCCA chr19:35947343-35947843 - 56 2.47e-04 CACACACACA CACACACACACACACACACACA CGAACAGTGC chr1:229558632-229559132 + 13 2.47e-04 TCCGCGCGGT GCCGCGCCTCTCCGCCCCACTC CGGGGACTGC chr7:129224527-129225027 + 44 2.47e-04 TCCCAGGGGA CGCTGCGGGCCCCGCCCATGGG GCGCGCAGTG chr10:101442038-10144253 - 55 2.47e-04 CATTTACACA CACACACACACACACACATACA CACAGAGACA chr19:33176977-33177477 - 72 2.47e-04 GCCCCCG TGGCCGAGGCCACGCCCCGTTG GGGGGCCCGT chr10:101830478-10183097 + 6 2.47e-04 GCCca cacacacacacacacacacaca cacacGCACG chr19:40602269-40602769 + 70 2.47e-04 GCTCATCTCC CGCCTGAGCCCCCGCCCGCTGC CActccctc chr1:26432031-26432531 - 37 2.47e-04 GTCATCTTTG GGCGCTGCGACACGCCCCTTCC GTCACCCAAA chr19:42283167-42283667 - 30 2.47e-04 ACGCTCACGG TCCATCGCTCCCCACCCACCAT CGTGCATTCA chr1:28581641-28582141 + 69 2.47e-04 TATAGGCCGC CCCTCGCGGCCACACCCGACAG TAGGCCGCCC chr15:75347446-75347946 - 22 2.47e-04 CCCCCCACAA CCCGATCCTGCACGCCCCCTCC CCGGGAACCC chr19:39970726-39971226 + 55 2.47e-04 CGCACGCCCA CAGCTCCCGTCCCGCCCTCGCG CCTGCGGGTA chr22:35840358-35840858 - 75 2.47e-04 TACA CACACACACACACACACACACA CGCACACACG chr6:41920945-41921445 + 6 2.71e-04 ACAGA GCGCCGGGTCCACGCCTTCCCC AAGGAATGGG chr10:102151941-10215244 + 8 2.71e-04 ATCCCTG ACGTCAGAGCTCCGCCTCCACA AGCTGGCGGC chr19:40420968-40421468 + 77 2.71e-04 ACCCGCAGTT TTCACGGTGACACTCCCTCCCC TC chr14:22982548-22983048 - 78 2.71e-04 T CCCCTACCCCCACACTCTTTCC TATTCCAATT chr19:2096001-2096501 + 37 2.71e-04 GATCGCCTCT GCCGCCCGCCTTCGCCCCTCCC GGTACCCAAC chr19:4310656-4311156 + 31 2.71e-04 TGGTTGAGTC CTCATGAGGCCCCGCCCTGGGG TGGAGCCATG chr1:153566457-153566957 + 76 2.71e-04 CCCAGGCAGT GACTCAGCGGCACACCCTCCTC CCC chr17:49677837-49678337 + 13 2.71e-04 tcggagcgcg cacactcacacacacacataca caccgacaca chr22:41468712-41469212 + 71 2.96e-04 TCTGTTCGTT GCACGTGAGCTCCGCCCATTGC GTTCACAG chr10:132671174-13267167 + 39 2.96e-04 CCGCCCTCCC TGCTTCGGACTCCGCCCTCCCT GCTTCGGACT chr21:29073490-29073990 + 15 2.96e-04 CTTCCTGGCT CTCCAATTAGCCCACCCTTTCC CTGCCGCCAG chr7:44200623-44201123 - 30 2.96e-04 ACGCCTCGCG TAAGCTTGGCCCCTCCCTGCTC GCCAGGTGGA chr16:68237477-68237977 + 78 2.96e-04 GGCGCAACCG CGAGTAACGCTCCTCCCCCTCC C chr10:1056411-1056911 - 20 2.96e-04 ACCCCTTCGG CTGCTGGGCCAACGCCCCCACC CTTGGTCACG chr19:56121186-56121686 + 13 2.96e-04 GCGAGCCCGC TATCCCGGCCACCGCCCCCAGC TCTGTGGTGC chr19:35628757-35629257 - 10 3.24e-04 GAGAGCCAAT GAGATTTGGCCACACCCTCAGG GGGAATATA chr17:74514051-74514551 - 51 3.24e-04 CATGACCACC CCCACATGACATCACCCATTAC ATATCACCCA chr20:63432037-63432537 + 50 3.24e-04 TCCCCACCCT CAGGGAAGGCTCCACCCACAGA GAAGGCTCCA chr12:389103-389603 + 15 3.24e-04 TTACCGTGCT GTCAAATCCCTCCGCCCCCTGC AGGAAACGGA chr6:85642980-85643480 + 52 3.24e-04 TTctggctcg cacgctccctcactccctccct cgctcgctcg chr6:26285332-26285832 + 10 3.24e-04 CTAAACGCC AAGGCAAAGCAACGCCCTTATA TGCCGGGAAT chr19:41959153-41959653 + 7 3.24e-04 CCCGCC CGACGCCGGCCCCACCCAGCGG AGTCGACGTG chr22:42965009-42965509 - 61 3.24e-04 TGTCCCTTTG AAGTCAGTCCCCCACCCTGCCC CCTGGCCCTG chr15:90954826-90955326 - 36 3.24e-04 CAGAGGTTGG GCCAGGTGGTCCCGCCCCTGCA GGAACCCGTG chr3:9749892-9750392 - 17 3.53e-04 TTCCTCCACC TCCTGCATGCCTCGCCCTTTGC GGGTCATCAA chr17:41689135-41689635 + 1 3.53e-04 . CCACACCCGCCCCTCCCGTCAC CATTGCGTCA chr10:93496245-93496745 + 15 3.53e-04 CGGCCCCAGC CACTTCTCGGCCCGCCCTCAGG TTTACTCTCC chr1:36224005-36224505 - 13 3.85e-04 GTGGGTTGCT CGGGGCCGTCCCCTCCCCCCGC CTGGGTGGCC chr2:190319719-190320219 - 72 3.85e-04 ATCCTCC CTCTTCCCGCTCCGCCTCAGCT CGCTCTCCGC chr13:30617613-30618113 + 23 3.85e-04 CACGTCTTCA CCTTCCCCGCCACGCCACCGTC CTTTCAGGCC chr10:130110447-13011094 + 72 3.85e-04 CCCCCGGAAC CTGCAGATCCTCCGCCCTCCGC TGTCGCC chr10:132279913-13228041 + 15 3.85e-04 TGAGGCCTCC ACTCTGTGATCACGCCCCTGCA CTCTGTGATC chr21:34889748-34890248 + 74 3.85e-04 ACGGGGCCCC TGACGCCCGCTCCTCCCTCCCC CAGGG chr1:228647592-228648092 - 26 4.18e-04 AAATCTGCTC CCTCTTTTCACACGCCCAAGCC CACACAACAG chr19:40465548-40466048 - 38 4.18e-04 GCGTGGCCCT TCGAGCCAGCTCCGCCCCGTTG TTCCTGGCTT chr1:53220247-53220747 + 72 4.18e-04 TTGCCTCCCA GACCCTCGCCACCTCCCCTCCG TGTCCCC chr7:103074658-103075158 - 9 4.18e-04 AGCGGAGCGC GGGGCGGTGCCACGCCCAGCCC CGCCCCCT chr21:34615108-34615608 + 3 4.54e-04 GG GTTATTGTACCCCGCCCTTCCA GGAGACGGGG chr1:163321649-163322149 - 72 4.54e-04 GTCCCGC CCCATTCCGCCAAGCCCACGTC CAACCGCGAC chr3:194134780-194135280 + 74 4.54e-04 cactcactca cacacgcacgcacacacacaTC CTCCC chr7:99465980-99466480 - 28 4.54e-04 CTTCCCGTGA GCCTCTGCTCTACGCCCCTGGA TGGGGCGTGC chr6:143450485-143450985 - 4 4.54e-04 CCGCGTTCCG CTGCCCGCGCTCCTCCTCTGCC GCG chr19:46600818-46601318 - 40 4.92e-04 TACTTTCCCT CGCCGCGCGCCCCGCCTCCCGG GCCCACTTCA chr15:76905015-76905515 + 52 4.92e-04 CCGCCCGGGT CTGCGCTACGCACGCCCCTCGC GGACACTCAC chr16:11915831-11916331 - 66 4.92e-04 GCGCTGCCGG AACTTGTAGTTCCACCTCCCGC CGCGCTAAAT chr1:155000785-155001285 - 27 4.92e-04 CAGGCCAAAC CAAACAGCCCCCCACCCCAGAC ATTATCTCAC chr19:35248561-35249061 - 12 4.92e-04 CCCGCCGCGG TCCTCCGAGCCACACTCCACCC GCTGCGCGCT chr1:1308031-1308531 - 74 4.92e-04 ATTCG CCGCCGCCCACACTCCCCGAGC GCGCCCGTTC chr19:36572858-36573358 + 31 4.92e-04 ACTAGGGTCT CCGTCTCTCACACACACACACC ACAATGACGT chr5:138464595-138465095 + 59 4.92e-04 GAACCCCGGC CCGACTCGCCCTCGCCCCCGCT CTGGGTCTGG chr16:2682227-2682727 - 24 4.92e-04 AGTTCTGTCC CGCCCACAGGTCCGCCCTGGTA GAGCGCCCGC chr19:41884091-41884591 - 4 5.32e-04 GGCTCCGGCC CCGACGACTCTACTCCTCCCGC CGG chr15:72375823-72376323 + 67 5.32e-04 CGCCTGCGAC CCCAGGAGGACCCACACCCTGC CCTTTCACTT chr15:82540311-82540811 - 50 5.75e-04 AGGGGCGCGC CACCGCCGCCCCCGCTCCACTC CGCCAGGGGG chr22:20117188-20117688 - 13 5.75e-04 CGGACACTCT CATTGTCCGGCCCGCCCCGCGC TTCCCGCCAA chr17:16535614-16536114 + 7 5.75e-04 ACACTG CGTTCCTGGGCCCGCCCAGTGT CCCAGAGTCC chr9:100098860-100099360 + 21 6.21e-04 AAATGTAGTC CTGCACTAGCCTCACCCCGCAC GTCGTCCGTC chr10:97334658-97335158 - 34 7.19e-04 GGAGGTCGGA AATCAGTCCCCACGCCCCGGAC CCCCTCCTGG chr17:74514440-74514940 - 48 7.19e-04 ATGACATCAC CCATCACATGACCACCCATTAC ATGACAGCAC chr17:42154845-42155345 - 69 7.19e-04 CCTCGCGCGC TCCCTACCGCCACTCCCGCGTT CCTACCGGCG chr1:46132509-46133009 + 50 7.73e-04 CACCGCCCCT TCCACGCCGTCCCGCCTCGATG TACCGGGATT chr19:55599898-55600398 - 54 8.29e-04 TCCTAACGAC CGGTCGCGGCCACGCCCGGAAG CCGCGCCTGC chr16:1971714-1972214 + 20 8.29e-04 CCCTCCAGGC CGGAAACGTCTCCGCCCGCTTC CGCTTCCCGA chr19:4723791-4724291 - 72 8.29e-04 CTAACCA CTATACCACCAACGCCCTGATA GGTAGCATCC chr19:41310152-41310652 - 27 8.89e-04 CTAGAGACAC CGCAACCGCACCCACCCGCCGC CTGCGCGTGA chr16:30021381-30021881 + 2 8.89e-04 C CCCCGACGGCCATTCCCAGCCA TCCGTTTTCC chr19:49641775-49642275 + 57 9.51e-04 CCGGCGTGCA TCGCGCGGACCCCGCCCCATGT GTCCCATTGG chr19:36139745-36140245 - 15 9.51e-04 ATTGCGCATG CGCACCCCACACCGCCCGGCTA GCTGGATCCA chr5:5422185-5422685 + 10 1.16e-03 CTTACGTCA CGGGCGGGTCACCGCCCACATA GCGGAGGCCT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CMCCCCCVGCCMCGCCCMYYCC MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr12:132159309-13215980 7.4e-09 17_[-1]_61 chr19:6530686-6531186 4e-08 34_[-1]_44 chr10:102114816-10211531 4e-08 18_[+1]_60 chr20:62598640-62599140 5.5e-08 51_[-1]_27 chr19:33521596-33522096 1.3e-07 36_[-1]_42 chr8:144580377-144580877 1.7e-07 76_[+1]_2 chr19:7871843-7872343 1.7e-07 16_[-1]_62 chr19:6677836-6678336 2.2e-07 51_[-1]_27 chr6:3258622-3259122 2.8e-07 51_[+1]_27 chr19:5686881-5687381 3.6e-07 19_[+1]_59 chr19:17209582-17210082 3.6e-07 35_[-1]_43 chr6:169840042-169840542 4.5e-07 32_[+1]_46 chr21:46635786-46636286 4.5e-07 17_[+1]_61 chr19:39125758-39126258 4.5e-07 31_[-1]_47 chr1:24744889-24745389 5.7e-07 64_[+1]_14 chr19:34134249-34134749 5.7e-07 6_[-1]_72 chr20:44885235-44885735 5.7e-07 1_[+1]_77 chr1:227787848-227788348 5.7e-07 21_[-1]_57 chr17:17206306-17206806 7.2e-07 39_[+1]_39 chr21:45500575-45501075 7.2e-07 13_[-1]_65 chr13:110705983-11070648 7.2e-07 9_[+1]_69 chr6:87155166-87155666 7.2e-07 19_[+1]_59 chr19:49712290-49712790 8.9e-07 77_[-1]_1 chr20:63350817-63351317 8.9e-07 70_[+1]_8 chr7:892965-893465 8.9e-07 57_[-1]_21 chr9:136342680-136343180 8.9e-07 67_[-1]_11 chr2:241881425-241881925 8.9e-07 52_[-1]_26 chr10:132752301-13275280 1.1e-06 34_[-1]_44 chr6:3118361-3118861 1.1e-06 77_[-1]_1 chr5:665553-666053 1.1e-06 55_[+1]_23 chr12:121839382-12183988 1.4e-06 10_[-1]_68 chr19:16111386-16111886 1.4e-06 8_[+1]_70 chr12:121888467-12188896 1.7e-06 43_[+1]_35 chr8:12194038-12194538 1.7e-06 3_[-1]_75 chr10:75235214-75235714 1.7e-06 36_[-1]_42 chr19:1122965-1123465 1.7e-06 20_[-1]_58 chr2:130727472-130727972 1.7e-06 30_[-1]_48 chr4:4672969-4673469 2e-06 47_[+1]_31 chr19:40716784-40717284 2e-06 71_[+1]_7 chrX:135098719-135099219 2.5e-06 72_[+1]_6 chr16:89142383-89142883 3e-06 14_[+1]_64 chr1:225777505-225778005 3e-06 21_[+1]_57 chr21:45287692-45288192 3e-06 68_[+1]_10 chrX:1452896-1453396 3.6e-06 22_[+1]_56 chr21:39183371-39183871 3.6e-06 21_[+1]_57 chr16:11742710-11743210 3.6e-06 33_[+1]_45 chr12:132305394-13230589 3.6e-06 37_[+1]_41 chr5:132963497-132963997 3.6e-06 20_[-1]_58 chr7:1011242-1011742 4.3e-06 13_[+1]_65 chr22:31970564-31971064 4.3e-06 7_[+1]_71 chr12:131224380-13122488 4.3e-06 67_[-1]_11 chr19:49363414-49363914 5.1e-06 62_[-1]_16 chr19:55081336-55081836 5.1e-06 17_[-1]_61 chr19:7870607-7871107 5.1e-06 28_[-1]_50 chr3:88058893-88059393 5.1e-06 66_[-1]_12 chr17:48025112-48025612 5.1e-06 20_[-1]_58 chr4:731298-731798 6.1e-06 18_[-1]_60 chr20:63941591-63942091 6.1e-06 62_[-1]_16 chr21:37267326-37267826 6.1e-06 32_[+1]_46 chr5:180810315-180810815 6.1e-06 20_[-1]_58 chr6:169840248-169840748 7.2e-06 10_[+1]_68 chr12:132303862-13230436 7.2e-06 49_[+1]_29 chr19:40609837-40610337 7.2e-06 6_[+1]_72 chr12:132304551-13230505 7.2e-06 32_[+1]_46 chr19:54190030-54190530 7.2e-06 63_[-1]_15 chr17:48998065-48998565 7.2e-06 1_[+1]_77 chr12:132305192-13230569 8.6e-06 15_[+1]_63 chr12:56079839-56080339 8.6e-06 65_[+1]_13 chr8:10839707-10840207 8.6e-06 24_[-1]_54 chr4:1566450-1566950 8.6e-06 11_[-1]_67 chr5:173056977-173057477 8.6e-06 48_[-1]_30 chr1:32817214-32817714 8.6e-06 70_[-1]_8 chr22:19432102-19432602 8.6e-06 23_[-1]_55 chr17:28726422-28726922 8.6e-06 [+1]_78 chr17:78140322-78140822 1e-05 8_[-1]_70 chr19:16628452-16628952 1e-05 75_[-1]_3 chr19:35899516-35900016 1e-05 35_[-1]_43 chr22:21629834-21630334 1e-05 25_[+1]_53 chr9:135189420-135189920 1e-05 11_[+1]_67 chr1:159924397-159924897 1e-05 6_[+1]_72 chr14:24299545-24300045 1e-05 16_[-1]_62 chr10:101569970-10157047 1e-05 58_[+1]_20 chr19:48170239-48170739 1.2e-05 4_[-1]_74 chr19:43463548-43464048 1.2e-05 48_[-1]_30 chr19:49659763-49660263 1.2e-05 50_[+1]_28 chr17:50866455-50866955 1.2e-05 49_[-1]_29 chr22:36387963-36388463 1.4e-05 34_[+1]_44 chr8:18083966-18084466 1.4e-05 31_[-1]_47 chr19:36115404-36115904 1.4e-05 63_[-1]_15 chr4:731948-732448 1.6e-05 57_[-1]_21 chr1:7770941-7771441 1.6e-05 61_[+1]_17 chr20:31572735-31573235 1.6e-05 10_[-1]_68 chr5:75511589-75512089 1.6e-05 20_[-1]_58 chr19:40623896-40624396 1.6e-05 73_[+1]_5 chr1:244450952-244451452 1.6e-05 28_[-1]_50 chr12:121399705-12140020 1.9e-05 40_[+1]_38 chr4:82373988-82374488 1.9e-05 59_[+1]_19 chr19:49640531-49641031 1.9e-05 39_[-1]_39 chr14:30621986-30622486 1.9e-05 47_[+1]_31 chr19:40444306-40444806 2.1e-05 1_[-1]_77 chr19:1905015-1905515 2.1e-05 16_[-1]_62 chr5:37371070-37371570 2.1e-05 63_[-1]_15 chr12:53727356-53727856 2.1e-05 23_[-1]_55 chr19:47112068-47112568 2.1e-05 16_[+1]_62 chr10:75234105-75234605 2.1e-05 14_[-1]_64 chr10:31032187-31032687 2.1e-05 6_[+1]_72 chr17:48908108-48908608 2.1e-05 35_[-1]_43 chr1:35031570-35032070 2.1e-05 4_[+1]_74 chr7:100436234-100436734 2.1e-05 18_[+1]_60 chr19:36214330-36214830 2.1e-05 54_[+1]_24 chr16:3158548-3159048 2.1e-05 54_[-1]_24 chr17:43842299-43842799 2.5e-05 35_[+1]_43 chr17:43842498-43842998 2.5e-05 [+1]_78 chr19:33795463-33795963 2.5e-05 32_[-1]_46 chr19:35879732-35880232 2.5e-05 [-1]_78 chr7:100874780-100875280 2.5e-05 64_[+1]_14 chr16:11256335-11256835 2.5e-05 13_[+1]_65 chr19:1062951-1063451 2.8e-05 19_[+1]_59 chr16:29805289-29805789 2.8e-05 33_[-1]_45 chr6:108558332-108558832 2.8e-05 55_[-1]_23 chr20:33709959-33710459 2.8e-05 20_[+1]_58 chr19:47483961-47484461 2.8e-05 19_[+1]_59 chr19:38506883-38507383 2.8e-05 56_[-1]_22 chr1:27383222-27383722 2.8e-05 23_[-1]_55 chr15:72783550-72784050 2.8e-05 61_[-1]_17 chr2:109613968-109614468 3.3e-05 63_[-1]_15 chr20:56468297-56468797 3.3e-05 61_[+1]_17 chr2:241541182-241541682 3.3e-05 8_[-1]_70 chr12:6493032-6493532 3.3e-05 36_[+1]_42 chr17:38559295-38559795 3.3e-05 47_[-1]_31 chr1:25819721-25820221 3.3e-05 59_[-1]_19 chr3:129121885-129122385 3.7e-05 48_[+1]_30 chr1:31938377-31938877 3.7e-05 62_[+1]_16 chr19:51367471-51367971 3.7e-05 63_[+1]_15 chr17:18039195-18039695 3.7e-05 9_[-1]_69 chr1:153958492-153958992 4.2e-05 78_[+1] chr14:105490678-10549117 4.2e-05 26_[-1]_52 chr7:158084723-158085223 4.2e-05 12_[+1]_66 chr19:33080891-33081391 4.2e-05 75_[-1]_3 chr2:197499753-197500253 4.2e-05 20_[+1]_58 chr3:11846637-11847137 4.2e-05 45_[+1]_33 chr21:46264680-46265180 4.8e-05 70_[+1]_8 chr17:7836700-7837200 4.8e-05 16_[+1]_62 chr19:58519475-58519975 4.8e-05 51_[+1]_27 chr19:39341737-39342237 4.8e-05 45_[-1]_33 chr9:85743205-85743705 4.8e-05 62_[+1]_16 chr4:37686403-37686903 4.8e-05 20_[+1]_58 chr10:74825734-74826234 4.8e-05 2_[-1]_76 chr1:156740889-156741389 4.8e-05 14_[+1]_64 chr10:69123867-69124367 4.8e-05 55_[-1]_23 chr1:244970534-244971034 4.8e-05 16_[+1]_62 chr19:58408243-58408743 4.8e-05 56_[+1]_22 chr14:22871491-22871991 4.8e-05 24_[-1]_54 chr5:139273804-139274304 5.5e-05 38_[+1]_40 chr21:42974012-42974512 5.5e-05 39_[+1]_39 chr6:5003558-5004058 5.5e-05 21_[+1]_57 chr17:51121661-51122161 5.5e-05 3_[-1]_75 chr12:6765973-6766473 5.5e-05 47_[+1]_31 chr14:23285904-23286404 5.5e-05 10_[-1]_68 chr22:41446615-41447115 6.2e-05 68_[-1]_10 chr10:72625882-72626382 6.2e-05 10_[+1]_68 chr1:185156981-185157481 6.2e-05 44_[-1]_34 chr12:57546998-57547498 6.2e-05 45_[+1]_33 chr19:38196245-38196745 6.2e-05 1_[-1]_77 chr17:58417399-58417899 6.2e-05 23_[-1]_55 chr8:1823310-1823810 6.2e-05 1_[-1]_77 chr19:45092705-45093205 6.2e-05 15_[+1]_63 chr10:17228328-17228828 6.2e-05 13_[+1]_65 chr14:91510382-91510882 6.2e-05 18_[-1]_60 chr15:67254500-67255000 7e-05 43_[+1]_35 chr19:35931416-35931916 7e-05 9_[-1]_69 chr5:10353477-10353977 7e-05 15_[+1]_63 chr1:29230719-29231219 7e-05 45_[+1]_33 chr12:57752212-57752712 7e-05 62_[-1]_16 chr20:33993046-33993546 7e-05 6_[+1]_72 chr16:68244996-68245496 7e-05 47_[-1]_31 chr7:42237309-42237809 7e-05 69_[+1]_9 chr10:67884310-67884810 7e-05 71_[-1]_7 chr20:3811632-3812132 7e-05 60_[-1]_18 chr7:2314404-2314904 7e-05 7_[+1]_71 chr1:114716560-114717060 7e-05 41_[+1]_37 chr21:28992690-28993190 7.8e-05 62_[+1]_16 chr1:25998121-25998621 7.8e-05 60_[+1]_18 chr6:149963654-149964154 7.8e-05 27_[-1]_51 chr16:29806528-29807028 7.8e-05 71_[+1]_7 chr3:48446407-48446907 7.8e-05 30_[-1]_48 chr19:17215163-17215663 7.8e-05 14_[-1]_64 chr19:10565853-10566353 7.8e-05 3_[+1]_75 chr19:39308384-39308884 8.8e-05 12_[+1]_66 chr19:40798677-40799177 8.8e-05 64_[+1]_14 chr19:680693-681193 8.8e-05 28_[-1]_50 chr19:17337112-17337612 9.8e-05 69_[+1]_9 chr12:1907471-1907971 9.8e-05 64_[-1]_14 chr19:39480493-39480993 9.8e-05 56_[+1]_22 chr12:121799718-12180021 9.8e-05 53_[-1]_25 chr21:39312318-39312818 9.8e-05 19_[+1]_59 chr1:229508141-229508641 9.8e-05 58_[-1]_20 chr1:234723900-234724400 0.00011 35_[-1]_43 chr19:35558010-35558510 0.00011 2_[-1]_76 chr1:228109113-228109613 0.00011 69_[-1]_9 chr21:25607279-25607779 0.00011 20_[+1]_58 chr9:135188516-135189016 0.00011 62_[+1]_16 chr6:31547286-31547786 0.00011 33_[+1]_45 chr5:40835067-40835567 0.00011 48_[-1]_30 chr19:57240392-57240892 0.00011 62_[-1]_16 chr18:74495928-74496428 0.00011 14_[-1]_64 chrX:15737907-15738407 0.00012 39_[-1]_39 chr6:37169503-37170003 0.00012 71_[+1]_7 chr3:15860077-15860577 0.00012 10_[-1]_68 chr19:38402888-38403388 0.00012 73_[-1]_5 chr1:31937439-31937939 0.00012 56_[+1]_22 chr22:20496057-20496557 0.00012 13_[+1]_65 chr1:225428014-225428514 0.00012 6_[+1]_72 chr1:156705880-156706380 0.00012 69_[-1]_9 chr8:37736321-37736821 0.00014 13_[-1]_65 chr14:23306553-23307053 0.00014 73_[+1]_5 chr19:45769265-45769765 0.00014 36_[-1]_42 chr9:131502743-131503243 0.00014 14_[-1]_64 chr5:178153774-178154274 0.00014 68_[-1]_10 chr6:79078069-79078569 0.00014 70_[+1]_8 chr9:121074946-121075446 0.00014 34_[-1]_44 chr22:39520144-39520644 0.00014 53_[+1]_25 chr1:228139955-228140455 0.00015 41_[-1]_37 chr16:30923121-30923621 0.00015 1_[+1]_77 chr19:45770478-45770978 0.00015 19_[+1]_59 chr20:326980-327480 0.00015 24_[+1]_54 chr7:105012476-105012976 0.00015 37_[+1]_41 chr12:50167277-50167777 0.00015 45_[+1]_33 chr21:33491442-33491942 0.00015 67_[+1]_11 chr19:55643334-55643834 0.00017 55_[+1]_23 chr10:97687228-97687728 0.00017 1_[+1]_77 chr10:87845991-87846491 0.00017 76_[+1]_2 chr20:324231-324731 0.00017 75_[+1]_3 chr1:38859666-38860166 0.00017 47_[-1]_31 chr9:127771247-127771747 0.00017 56_[+1]_22 chr6:87322336-87322836 0.00017 47_[-1]_31 chr15:90994507-90995007 0.00017 6_[-1]_72 chr2:48314203-48314703 0.00017 6_[+1]_72 chr10:119725664-11972616 0.00017 8_[-1]_70 chr19:17202202-17202702 0.00018 5_[+1]_73 chr22:41448096-41448596 0.00018 52_[+1]_26 chr4:6595859-6596359 0.00018 71_[-1]_7 chr5:116574672-116575172 0.00018 19_[+1]_59 chr10:5889838-5890338 0.0002 65_[+1]_13 chr19:8389860-8390360 0.0002 56_[+1]_22 chr1:225999200-225999700 0.0002 63_[-1]_15 chr17:8138746-8139246 0.0002 78_[+1] chr8:630793-631293 0.0002 33_[+1]_45 chr6:26171753-26172253 0.0002 35_[+1]_43 chr5:181246155-181246655 0.0002 21_[+1]_57 chr19:1490558-1491058 0.0002 39_[+1]_39 chr19:38336071-38336571 0.00022 61_[-1]_17 chrX:153971827-153972327 0.00022 48_[+1]_30 chr19:37594296-37594796 0.00022 17_[+1]_61 chr12:12724541-12725041 0.00022 45_[+1]_33 chr19:35947343-35947843 0.00025 55_[-1]_23 chr1:229558632-229559132 0.00025 12_[+1]_66 chr7:129224527-129225027 0.00025 43_[+1]_35 chr10:101442038-10144253 0.00025 54_[-1]_24 chr19:33176977-33177477 0.00025 71_[-1]_7 chr10:101830478-10183097 0.00025 5_[+1]_73 chr19:40602269-40602769 0.00025 69_[+1]_9 chr1:26432031-26432531 0.00025 36_[-1]_42 chr19:42283167-42283667 0.00025 29_[-1]_49 chr1:28581641-28582141 0.00025 68_[+1]_10 chr15:75347446-75347946 0.00025 21_[-1]_57 chr19:39970726-39971226 0.00025 54_[+1]_24 chr22:35840358-35840858 0.00025 74_[-1]_4 chr6:41920945-41921445 0.00027 5_[+1]_73 chr10:102151941-10215244 0.00027 7_[+1]_71 chr19:40420968-40421468 0.00027 76_[+1]_2 chr14:22982548-22983048 0.00027 77_[-1]_1 chr19:2096001-2096501 0.00027 36_[+1]_42 chr19:4310656-4311156 0.00027 30_[+1]_48 chr1:153566457-153566957 0.00027 75_[+1]_3 chr17:49677837-49678337 0.00027 12_[+1]_66 chr22:41468712-41469212 0.0003 70_[+1]_8 chr10:132671174-13267167 0.0003 38_[+1]_40 chr21:29073490-29073990 0.0003 14_[+1]_64 chr7:44200623-44201123 0.0003 29_[-1]_49 chr16:68237477-68237977 0.0003 77_[+1]_1 chr10:1056411-1056911 0.0003 19_[-1]_59 chr19:56121186-56121686 0.0003 12_[+1]_66 chr19:35628757-35629257 0.00032 9_[-1]_69 chr17:74514051-74514551 0.00032 50_[-1]_28 chr20:63432037-63432537 0.00032 49_[+1]_29 chr12:389103-389603 0.00032 14_[+1]_64 chr6:85642980-85643480 0.00032 51_[+1]_27 chr6:26285332-26285832 0.00032 9_[+1]_69 chr19:41959153-41959653 0.00032 6_[+1]_72 chr22:42965009-42965509 0.00032 60_[-1]_18 chr15:90954826-90955326 0.00032 35_[-1]_43 chr3:9749892-9750392 0.00035 16_[-1]_62 chr17:41689135-41689635 0.00035 [+1]_78 chr10:93496245-93496745 0.00035 14_[+1]_64 chr1:36224005-36224505 0.00038 12_[-1]_66 chr2:190319719-190320219 0.00038 71_[-1]_7 chr13:30617613-30618113 0.00038 22_[+1]_56 chr10:130110447-13011094 0.00038 71_[+1]_7 chr10:132279913-13228041 0.00038 14_[+1]_64 chr21:34889748-34890248 0.00038 73_[+1]_5 chr1:228647592-228648092 0.00042 25_[-1]_53 chr19:40465548-40466048 0.00042 37_[-1]_41 chr1:53220247-53220747 0.00042 71_[+1]_7 chr7:103074658-103075158 0.00042 8_[-1]_70 chr21:34615108-34615608 0.00045 2_[+1]_76 chr1:163321649-163322149 0.00045 71_[-1]_7 chr3:194134780-194135280 0.00045 73_[+1]_5 chr7:99465980-99466480 0.00045 27_[-1]_51 chr6:143450485-143450985 0.00045 3_[-1]_75 chr19:46600818-46601318 0.00049 39_[-1]_39 chr15:76905015-76905515 0.00049 51_[+1]_27 chr16:11915831-11916331 0.00049 65_[-1]_13 chr1:155000785-155001285 0.00049 26_[-1]_52 chr19:35248561-35249061 0.00049 11_[-1]_67 chr1:1308031-1308531 0.00049 73_[-1]_5 chr19:36572858-36573358 0.00049 30_[+1]_48 chr5:138464595-138465095 0.00049 58_[+1]_20 chr16:2682227-2682727 0.00049 23_[-1]_55 chr19:41884091-41884591 0.00053 3_[-1]_75 chr15:72375823-72376323 0.00053 66_[+1]_12 chr15:82540311-82540811 0.00058 49_[-1]_29 chr22:20117188-20117688 0.00058 12_[-1]_66 chr17:16535614-16536114 0.00058 6_[+1]_72 chr9:100098860-100099360 0.00062 20_[+1]_58 chr10:97334658-97335158 0.00072 33_[-1]_45 chr17:74514440-74514940 0.00072 47_[-1]_31 chr17:42154845-42155345 0.00072 68_[-1]_10 chr1:46132509-46133009 0.00077 49_[+1]_29 chr19:55599898-55600398 0.00083 53_[-1]_25 chr16:1971714-1972214 0.00083 19_[+1]_59 chr19:4723791-4724291 0.00083 71_[-1]_7 chr19:41310152-41310652 0.00089 26_[-1]_52 chr16:30021381-30021881 0.00089 1_[+1]_77 chr19:49641775-49642275 0.00095 56_[+1]_22 chr19:36139745-36140245 0.00095 14_[-1]_64 chr5:5422185-5422685 0.0012 9_[+1]_69 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CMCCCCCVGCCMCGCCCMYYCC MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CMCCCCCVGCCMCGCCCMYYCC width=22 seqs=337 chr12:132159309-13215980 ( 18) CACACCCCGCCACGCCCATACC 1 chr19:6530686-6531186 ( 35) CGCCCGCGGCCACGCCCCTTCC 1 chr10:102114816-10211531 ( 19) CCCCACCGGCCCCGCCCCCTCC 1 chr20:62598640-62599140 ( 52) CACACCCAGCCACACCCAGCCC 1 chr19:33521596-33522096 ( 37) CGCCCCCTGCCCCGCCCTTACC 1 chr8:144580377-144580877 ( 77) CTCACGTGGCCCCGCCCATTCC 1 chr19:7871843-7872343 ( 17) CTCCACCAGCCACGCCCCCCTC 1 chr19:6677836-6678336 ( 52) CCGCCCATGCCACGCCCACACC 1 chr6:3258622-3259122 ( 52) CCTCCCCGACCACGCCCCTCAC 1 chr19:5686881-5687381 ( 20) CCGCCCCAGCCACGCCCCTCCT 1 chr19:17209582-17210082 ( 36) CACCCAAGGCCCCGCCCACCAA 1 chr6:169840042-169840542 ( 33) CACTCCACGCTACACCCACACC 1 chr21:46635786-46636286 ( 18) CTTCTACGGCCACGCCCACCCC 1 chr19:39125758-39126258 ( 32) CCCCGGCGGCCCCGCCCCCCTC 1 chr1:24744889-24745389 ( 65) CCACCAAGGCCACGCCCCCTAC 1 chr19:34134249-34134749 ( 7) CAGCCGCGGCCACGCCCCTCGC 1 chr20:44885235-44885735 ( 2) CACCCCCAGCTCCGCCCTCTCT 1 chr1:227787848-227788348 ( 22) CCCGCCTGGCCACACCCACAGC 1 chr17:17206306-17206806 ( 40) CACGCCAGGCCACGCCCCCGTC 1 chr21:45500575-45501075 ( 14) CACACCAAACCACACCCCCACA 1 chr13:110705983-11070648 ( 10) CCCTTGGGGCCACGCCCACTCC 1 chr6:87155166-87155666 ( 20) CCGCCCCAACCCCGCCCTTCTC 1 chr19:49712290-49712790 ( 78) CCTATCTGGCCACGCCCCTCAC 1 chr20:63350817-63351317 ( 71) CGCCCACTGCCACACCCATGCC 1 chr7:892965-893465 ( 58) CACACACCACCACGCCCACGCC 1 chr9:136342680-136343180 ( 68) CAGCCTCTGCCACGCCCACCGC 1 chr2:241881425-241881925 ( 53) CGCTCGTGGCCACGCCCCCTGC 1 chr10:132752301-13275280 ( 35) ACCTCCTCGCCACGCCCCTCCA 1 chr6:3118361-3118861 ( 78) CGCCCTCTGCTCCGCCCACCTC 1 chr5:665553-666053 ( 56) CACACCAGGCCACGCCCTCCTG 1 chr12:121839382-12183988 ( 11) CCCCCAAGGCTCCGCCCACACT 1 chr19:16111386-16111886 ( 9) CACATAATGCCACGCCCCCGCC 1 chr12:121888467-12188896 ( 44) CATCCCAAGCCCCGCCCCTTGA 1 chr8:12194038-12194538 ( 4) TACCCCAGGCCCCGCCCTCCTA 1 chr10:75235214-75235714 ( 37) TCCCCCAGGCCACGCCCAGAAC 1 chr19:1122965-1123465 ( 21) CATTCCTGGCCACGCCCATGAC 1 chr2:130727472-130727972 ( 31) AGCCCAAGGCCACGCCCATCAC 1 chr4:4672969-4673469 ( 48) CCTCCCTGACCACTCCCATCCC 1 chr19:40716784-40717284 ( 72) GCTCCCCAGCCACACCCCTCGC 1 chrX:135098719-135099219 ( 73) CATTCTCAGCTCCGCCCACCGC 1 chr16:89142383-89142883 ( 15) CACCTGCAGACACACCCACACC 1 chr1:225777505-225778005 ( 22) CGCCCTGGGCTCCGCCCACTCC 1 chr21:45287692-45288192 ( 69) AACGCCCAGCTCCGCCCTCCCC 1 chrX:1452896-1453396 ( 23) CCCCTGAGACCACGCCCAGACC 1 chr21:39183371-39183871 ( 22) AGCTCGCGGCCACGCCCTCTAC 1 chr16:11742710-11743210 ( 34) CGCCCAAATCCCCGCCCCCAAC 1 chr12:132305394-13230589 ( 38) CTCACCCGGACACGCCCTCGCC 1 chr5:132963497-132963997 ( 21) CCCACAGACCCCCGCCCCCTAC 1 chr7:1011242-1011742 ( 14) GACACCCAGACACACCCACACC 1 chr22:31970564-31971064 ( 8) CGCCCTTGACTCCGCCCACTTC 1 chr12:131224380-13122488 ( 68) TCACCCTGGCCCCACCCCTATC 1 chr19:49363414-49363914 ( 63) ATTCCCTGGCCACGCCCACACA 1 chr19:55081336-55081836 ( 18) CGCAGCCGGCCCCGCCCTTCCA 1 chr19:7870607-7871107 ( 29) CGCCATTGACCACGCCCCCTCC 1 chr3:88058893-88059393 ( 67) TACTTCCGGCTCCGCCCACCCA 1 chr17:48025112-48025612 ( 21) CCACCCCGGCCCCGCCCCTGGA 1 chr4:731298-731798 ( 19) CCCTGAGGGCCACGCCCACCCA 1 chr20:63941591-63942091 ( 63) CCTTTCCTGCCCCGCCCCATTC 1 chr21:37267326-37267826 ( 33) CCAAGCTAGCCCCACCCCTTCC 1 chr5:180810315-180810815 ( 21) CCTCCCAAGCTCCGCCCAGCAC 1 chr6:169840248-169840748 ( 11) ACACCCACACCACGCCCACTCC 1 chr12:132303862-13230436 ( 50) CTCACCCGGGCACACCCTCTCC 1 chr19:40609837-40610337 ( 7) TCCCTTTGACCCCACCCCTACC 1 chr12:132304551-13230505 ( 33) CTCGCCCAGACACACCCTCACC 1 chr19:54190030-54190530 ( 64) CGCTCCTTGCTCCACCCCCTCA 1 chr17:48998065-48998565 ( 2) CACGCCCAGCCCCTCCCTATCC 1 chr12:132305192-13230569 ( 16) CTCACCCGGGCACACCCTCACC 1 chr12:56079839-56080339 ( 66) CTCACACACACACACCCCTCCC 1 chr8:10839707-10840207 ( 25) CCCGCCCTGCTCCGCCCCCTCG 1 chr4:1566450-1566950 ( 12) CCGCCAAAGCCACACCCACCTG 1 chr5:173056977-173057477 ( 49) CCCCCGCGGCACCGCCTCCCCC 1 chr1:32817214-32817714 ( 71) GCGCCTCAGCCCCGCCCTCCGC 1 chr22:19432102-19432602 ( 24) CCCTTCCGTCCCCGCCCTGTGC 1 chr17:28726422-28726922 ( 1) CCGACACGCCCACGCCCCCTAA 1 chr17:78140322-78140822 ( 9) CTCCAAGGGCCCCGCCCCCAAC 1 chr19:16628452-16628952 ( 76) GCCCTGCCACCACACCCATTCC 1 chr19:35899516-35900016 ( 36) TCCTCCCGCCCCCGCCCCGCGC 1 chr22:21629834-21630334 ( 26) CAGCCCAGGCCCCGCCCCCGGA 1 chr9:135189420-135189920 ( 12) CCCATCATGCCACACCCCACTA 1 chr1:159924397-159924897 ( 7) CCCCCACGACCACACCCTGGGC 1 chr14:24299545-24300045 ( 17) CCCAGATCGCTCCGCCCCCATC 1 chr10:101569970-10157047 ( 59) CCCACCCCACTCCACCCCACTC 1 chr19:48170239-48170739 ( 5) CACCCCTTTTCCCGCCCTCCTC 1 chr19:43463548-43464048 ( 49) CATCTGAGACCACGCCCACAGC 1 chr19:49659763-49660263 ( 51) CACACACACACACACCCCCTGC 1 chr17:50866455-50866955 ( 50) GCCGCCCTACCCCACCCCTTTC 1 chr22:36387963-36388463 ( 35) CTCTTTCCGCCCCACCTCCACC 1 chr8:18083966-18084466 ( 32) TCCTCCCAGTCCCGCCTCCTCC 1 chr19:36115404-36115904 ( 64) CCCCCATGGCCACACCTTGAAC 1 chr4:731948-732448 ( 58) CCCTAAGGACCACGCCCACCCA 1 chr1:7770941-7771441 ( 62) CCACGACGCCCCCGCCCACTTC 1 chr20:31572735-31573235 ( 11) CCCCTGAGGCCCCGCCCCTGAT 1 chr5:75511589-75512089 ( 21) GCATCCCTACCCCGCCCTCTCC 1 chr19:40623896-40624396 ( 74) CTCCGAAGGCCACGCCCCATGC 1 chr1:244450952-244451452 ( 29) GCCCCCCCGCCCCGCCCAGGGC 1 chr12:121399705-12140020 ( 41) CGCCAGAGGCCCCGCCCAATCC 1 chr4:82373988-82374488 ( 60) GCCCCCTGCCTCCGCCCCCGCC 1 chr19:49640531-49641031 ( 40) ATCTCACGGCCCCTCCCTGCCC 1 chr14:30621986-30622486 ( 48) ACCCTTTGGCCCCGCCCTTCCG 1 chr19:40444306-40444806 ( 2) GAGTCGCTGCCCCGCCCCCTGC 1 chr19:1905015-1905515 ( 17) GCCGCCTCGCCCCGCCCCGCTC 1 chr5:37371070-37371570 ( 64) CCAACCCCATCCCGCCCCTCTC 1 chr12:53727356-53727856 ( 24) CGCCCTCTTCCCCGCCCTCCTT 1 chr19:47112068-47112568 ( 17) ACCCACCGACCCCGCCCTTCCT 1 chr10:75234105-75234605 ( 15) CCTCCAAGACCCCGCCTCCCGC 1 chr10:31032187-31032687 ( 7) CCCGCTAGACTCCGCCCAGACC 1 chr17:48908108-48908608 ( 36) TCCGCCCACCCCCGCCCCAACC 1 chr1:35031570-35032070 ( 5) GCCCCGCCGTCCCGCCCACTAC 1 chr7:100436234-100436734 ( 19) CCTCCTTTCCCCCGCCCCTCCT 1 chr19:36214330-36214830 ( 55) ACGCCCCGGCCCCGCCCAGGAC 1 chr16:3158548-3159048 ( 55) CCACCCCTACCCCTCCCCGCCC 1 chr17:43842299-43842799 ( 36) CACGCCTCTCCACGCCTCTCTC 1 chr17:43842498-43842998 ( 1) CACGCCTCTCCACGCCTCTCTC 1 chr19:33795463-33795963 ( 33) CTCCCACTCCCACTCCTCCTCC 1 chr19:35879732-35880232 ( 1) GCCTCTGAGCCCCGCCCCCGGC 1 chr7:100874780-100875280 ( 65) CCCTGCTCTCCCCGCCCTTCGC 1 chr16:11256335-11256835 ( 14) CGCGCCCTGACACACCCTCCTC 1 chr19:1062951-1063451 ( 20) ACACCATGGCCCCGCCCCATAC 1 chr16:29805289-29805789 ( 34) CACCGTCCTCCCCGCCCCACCC 1 chr6:108558332-108558832 ( 56) GACGCGCGGCCCCGCCCCTGCA 1 chr20:33709959-33710459 ( 21) TATACAGAACCACACCCCTTCC 1 chr19:47483961-47484461 ( 20) CTCCGCAGCCCCCGCCCCAACC 1 chr19:38506883-38507383 ( 57) GTGCTTAAGCCCCGCCCATTTC 1 chr1:27383222-27383722 ( 24) GCACACTAGCCACGCCCCTAAC 1 chr15:72783550-72784050 ( 62) CGCCCGTCGCCCCGCCCCTTGG 1 chr2:109613968-109614468 ( 64) CTGTCTCGGCCACACCTACCTA 1 chr20:56468297-56468797 ( 62) GCCGCCCCGCCCCGCCCCGCTA 1 chr2:241541182-241541682 ( 9) TCCCAGCGGCCACGCCCCAACA 1 chr12:6493032-6493532 ( 37) ACCGCCCACCTACGCCCCATCC 1 chr17:38559295-38559795 ( 48) CCGCCCCACCAACGCCCACCTA 1 chr1:25819721-25820221 ( 60) ACCTCACGGCCCCTCCTTCCAC 1 chr3:129121885-129122385 ( 49) CCTCCCCGACTCCGCCTTCAGC 1 chr1:31938377-31938877 ( 63) CACGCTGCGCCCCGCCCATCCG 1 chr19:51367471-51367971 ( 64) TGTCTCGAGCCCCGCCCACCTC 1 chr17:18039195-18039695 ( 10) CACACACAGACACACACACACC 1 chr1:153958492-153958992 ( 79) CCCTCTCGGCTACTCCCTGAGA 1 chr14:105490678-10549117 ( 27) CACCCGACACCCCGCCTCGCTC 1 chr7:158084723-158085223 ( 13) GACGCCCATCCACACCCACGAC 1 chr19:33080891-33081391 ( 76) TCTTCCGGGCCCCGCCCCCTCG 1 chr2:197499753-197500253 ( 21) GCGCGCGAGCCCCGCCCCTCCC 1 chr3:11846637-11847137 ( 46) CGTCCCTTGCTACGCCCCACGC 1 chr21:46264680-46265180 ( 71) CACTCCAGGCCACACCCAAGGG 1 chr17:7836700-7837200 ( 17) CCCTTCTATTCCCTCCCACCTC 1 chr19:58519475-58519975 ( 52) CCCATTCGACCCCACCTCCGAC 1 chr19:39341737-39342237 ( 46) CCTCCTCTTCCCCGCCCCTTGG 1 chr9:85743205-85743705 ( 63) AACTTAGAGCTACTCCCCCACC 1 chr4:37686403-37686903 ( 21) GCCCTCTTTCTCCACCCACCTC 1 chr10:74825734-74826234 ( 3) CCATCCCGCCCCCTCCTCCACC 1 chr1:156740889-156741389 ( 15) CCTCCCCCGCCACGCCCGTCGA 1 chr10:69123867-69124367 ( 56) CTCCCCCACCCCCGCACCCGTC 1 chr1:244970534-244971034 ( 17) CACCCTCTTCCCCTCCTCCCGC 1 chr19:58408243-58408743 ( 57) CGCCGGAAGCCCCGCCCCACGC 1 chr14:22871491-22871991 ( 25) CAAGCCCGGTCCCACCCCTGCC 1 chr5:139273804-139274304 ( 39) CCACCGAAGCCACGCCCAGTAG 1 chr21:42974012-42974512 ( 40) GCGCTGAGGCCACGCCCCTACT 1 chr6:5003558-5004058 ( 22) CGCCGGCGGCCCCGCCCCGCGA 1 chr17:51121661-51122161 ( 4) CTCCAGTGACTCCACCCCTTAC 1 chr12:6765973-6766473 ( 48) TCCTCCTATCCCCACCTCTCCA 1 chr14:23285904-23286404 ( 11) ACCCATCCGCCCCGCCTCCAAC 1 chr22:41446615-41447115 ( 69) GGGCCCTGGCCCCGCCCCTGCA 1 chr10:72625882-72626382 ( 11) CTCCACCCCCTCCGCCCACTCT 1 chr1:185156981-185157481 ( 45) AACACACACACACACCCCGCCC 1 chr12:57546998-57547498 ( 46) GCCCTGCTGCCACACCCCTGGA 1 chr19:38196245-38196745 ( 2) ACCTCCACACTCCGCCCTTGAC 1 chr17:58417399-58417899 ( 24) CTCTAGCAGCTCCACCCTCACT 1 chr8:1823310-1823810 ( 2) CTCCCAGAGCACCGCCCTTTCT 1 chr19:45092705-45093205 ( 16) TCTACTTCGCCCCGCCCCTCAT 1 chr10:17228328-17228828 ( 14) ACTAAGCGACCCCACCCCTCTC 1 chr14:91510382-91510882 ( 19) CAAACGTATCCACGCCCCTCGT 1 chr15:67254500-67255000 ( 44) CTGGCCTGACCCCGCCCCTAGA 1 chr19:35931416-35931916 ( 10) AGGCAGAGGCCACACCCACTCC 1 chr5:10353477-10353977 ( 16) GTGTTCCCGCCCCTCCCCCTCC 1 chr1:29230719-29231219 ( 46) GCGCCTGCGCCCCGCCCCTGCC 1 chr12:57752212-57752712 ( 63) CCATCGCCCCTCCGCCCCCTTA 1 chr20:33993046-33993546 ( 7) CCCCCGGGGCCCCTCCTCCCCT 1 chr16:68244996-68245496 ( 48) CGCCGCCATATACGCCCCTCCC 1 chr7:42237309-42237809 ( 70) CTCCCCGCGCTCCTCCTCCCCC 1 chr10:67884310-67884810 ( 72) CATCGCCGCCCCCGCCCTCTCG 1 chr20:3811632-3812132 ( 61) CACGTGAGGCCCCTCCCTTCCT 1 chr7:2314404-2314904 ( 8) GCCCACATGCCCCTCCCCGTCC 1 chr1:114716560-114717060 ( 42) CGCCTGAGTCCCCGCCCCGGCC 1 chr21:28992690-28993190 ( 63) CACTTCCGCTCCCGCCTCCCGC 1 chr1:25998121-25998621 ( 61) AACCCTCCGCCTCACCCTCCTC 1 chr6:149963654-149964154 ( 28) TCCACCCCGTCACGCCCCGGGC 1 chr16:29806528-29807028 ( 72) ACCTCAGGGTCACGCCCAGAAC 1 chr3:48446407-48446907 ( 31) CACACCCGGCCCCGCCCGGTGT 1 chr19:17215163-17215663 ( 15) CCGGCCCTACACCACCCCTTCC 1 chr19:10565853-10566353 ( 4) CGCCCTCAGTCCCGCCCGCATC 1 chr19:39308384-39308884 ( 13) CGCTTTATGCCCCGCCCATGGT 1 chr19:40798677-40799177 ( 65) CAGACCCGGCCCCTCACACTGC 1 chr19:680693-681193 ( 29) CCCCTCTGGTTACACCCACAAG 1 chr19:17337112-17337612 ( 70) AACATTTCGCTACACCTACCTC 1 chr12:1907471-1907971 ( 65) ACCCACCAGACACGCCCACCAG 1 chr19:39480493-39480993 ( 57) CTTCCGTCCACCCGCCCCTCCC 1 chr12:121799718-12180021 ( 54) AACGCCCTGATCCGCCCTCCAC 1 chr21:39312318-39312818 ( 20) CTGCGCACGCCACACCCCCGCA 1 chr1:229508141-229508641 ( 59) ACGTCACGATCCCGCCCCCGCC 1 chr1:234723900-234724400 ( 36) CTCCCTTCCTCCCTCCCTCTCC 1 chr19:35558010-35558510 ( 3) CATCTCCCGCTCCGCCTATGGC 1 chr1:228109113-228109613 ( 70) CCGCGCCGGCCCCGCCCAACAG 1 chr21:25607279-25607779 ( 21) CAAGTCCTTCTCCGCCCTCCTC 1 chr9:135188516-135189016 ( 63) CCTACCATGTCACACCTATGCC 1 chr6:31547286-31547786 ( 34) GACATCCGGTAACGCCCCTCAC 1 chr5:40835067-40835567 ( 49) TCCTCTTGACCCCACCTACACT 1 chr19:57240392-57240892 ( 63) GCCACGGAACACCGCCCCCTCC 1 chr18:74495928-74496428 ( 15) CCATTTCCGTCCCGCCCACCAA 1 chrX:15737907-15738407 ( 40) TTGCCCCGGTCACGCCCAACCA 1 chr6:37169503-37170003 ( 72) CGCCTCCCCTCACGCCCCGCGC 1 chr3:15860077-15860577 ( 11) TCCTTGGCTCCCCACCCTCCCC 1 chr19:38402888-38403388 ( 74) CTCCCACGCTTCCGCCTTCACC 1 chr1:31937439-31937939 ( 57) GACGCGCTCCCACTCCCCCCAC 1 chr22:20496057-20496557 ( 14) CCCTCTCATTCCCTCCCTCCTT 1 chr1:225428014-225428514 ( 7) GCGCGTCCGCCCCGCCCCACCC 1 chr1:156705880-156706380 ( 70) CCGTGCCGCCCCCGCCCAGCCT 1 chr8:37736321-37736821 ( 14) AGACCACACCCCCGCCCCGCGC 1 chr14:23306553-23307053 ( 74) CTCCCTCTCTCCCTCCCTCCCA 1 chr19:45769265-45769765 ( 37) ACCCGGAGGCACCGCCCCCGCC 1 chr9:131502743-131503243 ( 15) GGCACTCCGCACCACCCACCGC 1 chr5:178153774-178154274 ( 69) CCTAATCGGTTCCGCCCAGTCC 1 chr6:79078069-79078569 ( 71) GGCCCGCGCCCCCGCCCCCCGG 1 chr9:121074946-121075446 ( 35) GACACGCGCCCCCGCCCCGAAT 1 chr22:39520144-39520644 ( 54) TCGTCACAGCTACGCCCTGGGC 1 chr1:228139955-228140455 ( 42) AGGCGACTGCCCCGCCCATGTC 1 chr16:30923121-30923621 ( 2) CCCGGCTGGGCACGCCCTCCGC 1 chr19:45770478-45770978 ( 20) TCGCCCCGCCTACGCCCATAGG 1 chr20:326980-327480 ( 25) GGCCGGAGGACCCGCCCCCTCC 1 chr7:105012476-105012976 ( 38) TGTCCCCTCCCCCGCCCCGGCC 1 chr12:50167277-50167777 ( 46) TCCGGGGATCCACGCCCCTTCC 1 chr21:33491442-33491942 ( 68) GACCACCAGCTCCACCTCCGTC 1 chr19:55643334-55643834 ( 56) GCCCGGGCGCCCCGCCCCAACC 1 chr10:97687228-97687728 ( 2) CACCGCCCTCTCCGCCCCCGCG 1 chr10:87845991-87846491 ( 77) ATCTCCCTTCCACTCCCAGCAA 1 chr20:324231-324731 ( 76) AGCGCGCGGCCCCTCCCCGCCA 1 chr1:38859666-38860166 ( 48) TCCTCGTGACTCCTCCTCCCCC 1 chr9:127771247-127771747 ( 57) CGCCCCCTAGCACACCCCTCCG 1 chr6:87322336-87322836 ( 48) CCCGAGACGCCCCGCCCCGCTT 1 chr15:90994507-90995007 ( 7) CACGCCCGGCCACTCACAGACA 1 chr2:48314203-48314703 ( 7) CCGTGTGAGCCCCGCCCTTCCG 1 chr10:119725664-11972616 ( 9) TCCTCCCAGCTCCTCCCCGCGG 1 chr19:17202202-17202702 ( 6) CCACCCATGCCCTGCCCATACC 1 chr22:41448096-41448596 ( 53) CCCCCCATCCCCCACACTCTGA 1 chr4:6595859-6596359 ( 72) ACCTGGATACCACGCCCACCTG 1 chr5:116574672-116575172 ( 20) CTTCCGCAACTCCGCCTACTTT 1 chr10:5889838-5890338 ( 66) CGTCCGTCAGCACGCCCCCTCC 1 chr19:8389860-8390360 ( 57) AGTCTTCCGCCCCGCCCTCTTG 1 chr1:225999200-225999700 ( 64) CCCAGCCCGCACCGCCCCGCCG 1 chr17:8138746-8139246 ( 79) TCCGCCCGGCTCCGCCCGGCTC 1 chr8:630793-631293 ( 34) CCCTCCCGTGACCACCCACCAC 1 chr6:26171753-26172253 ( 36) GCCGCCCCGTTACGCCCATCCG 1 chr5:181246155-181246655 ( 22) AGTCCAGGTCCCCACCCACGCC 1 chr19:1490558-1491058 ( 40) TGTGATCAGCCCCGCCCTCCAC 1 chr19:38336071-38336571 ( 62) GCCCTCTGGTAACGCCCCTCCT 1 chrX:153971827-153972327 ( 49) CCTCCACGCCTCCGCCCTGGGA 1 chr19:37594296-37594796 ( 18) CTAGCAGCACCACACCCCCGCC 1 chr12:12724541-12725041 ( 46) ACACCCTACGCCCACCCACCCC 1 chr19:35947343-35947843 ( 56) CACACACACACACACACACACA 1 chr1:229558632-229559132 ( 13) GCCGCGCCTCTCCGCCCCACTC 1 chr7:129224527-129225027 ( 44) CGCTGCGGGCCCCGCCCATGGG 1 chr10:101442038-10144253 ( 55) CACACACACACACACACATACA 1 chr19:33176977-33177477 ( 72) TGGCCGAGGCCACGCCCCGTTG 1 chr10:101830478-10183097 ( 6) CACACACACACACACACACACA 1 chr19:40602269-40602769 ( 70) CGCCTGAGCCCCCGCCCGCTGC 1 chr1:26432031-26432531 ( 37) GGCGCTGCGACACGCCCCTTCC 1 chr19:42283167-42283667 ( 30) TCCATCGCTCCCCACCCACCAT 1 chr1:28581641-28582141 ( 69) CCCTCGCGGCCACACCCGACAG 1 chr15:75347446-75347946 ( 22) CCCGATCCTGCACGCCCCCTCC 1 chr19:39970726-39971226 ( 55) CAGCTCCCGTCCCGCCCTCGCG 1 chr22:35840358-35840858 ( 75) CACACACACACACACACACACA 1 chr6:41920945-41921445 ( 6) GCGCCGGGTCCACGCCTTCCCC 1 chr10:102151941-10215244 ( 8) ACGTCAGAGCTCCGCCTCCACA 1 chr19:40420968-40421468 ( 77) TTCACGGTGACACTCCCTCCCC 1 chr14:22982548-22983048 ( 78) CCCCTACCCCCACACTCTTTCC 1 chr19:2096001-2096501 ( 37) GCCGCCCGCCTTCGCCCCTCCC 1 chr19:4310656-4311156 ( 31) CTCATGAGGCCCCGCCCTGGGG 1 chr1:153566457-153566957 ( 76) GACTCAGCGGCACACCCTCCTC 1 chr17:49677837-49678337 ( 13) CACACTCACACACACACATACA 1 chr22:41468712-41469212 ( 71) GCACGTGAGCTCCGCCCATTGC 1 chr10:132671174-13267167 ( 39) TGCTTCGGACTCCGCCCTCCCT 1 chr21:29073490-29073990 ( 15) CTCCAATTAGCCCACCCTTTCC 1 chr7:44200623-44201123 ( 30) TAAGCTTGGCCCCTCCCTGCTC 1 chr16:68237477-68237977 ( 78) CGAGTAACGCTCCTCCCCCTCC 1 chr10:1056411-1056911 ( 20) CTGCTGGGCCAACGCCCCCACC 1 chr19:56121186-56121686 ( 13) TATCCCGGCCACCGCCCCCAGC 1 chr19:35628757-35629257 ( 10) GAGATTTGGCCACACCCTCAGG 1 chr17:74514051-74514551 ( 51) CCCACATGACATCACCCATTAC 1 chr20:63432037-63432537 ( 50) CAGGGAAGGCTCCACCCACAGA 1 chr12:389103-389603 ( 15) GTCAAATCCCTCCGCCCCCTGC 1 chr6:85642980-85643480 ( 52) CACGCTCCCTCACTCCCTCCCT 1 chr6:26285332-26285832 ( 10) AAGGCAAAGCAACGCCCTTATA 1 chr19:41959153-41959653 ( 7) CGACGCCGGCCCCACCCAGCGG 1 chr22:42965009-42965509 ( 61) AAGTCAGTCCCCCACCCTGCCC 1 chr15:90954826-90955326 ( 36) GCCAGGTGGTCCCGCCCCTGCA 1 chr3:9749892-9750392 ( 17) TCCTGCATGCCTCGCCCTTTGC 1 chr17:41689135-41689635 ( 1) CCACACCCGCCCCTCCCGTCAC 1 chr10:93496245-93496745 ( 15) CACTTCTCGGCCCGCCCTCAGG 1 chr1:36224005-36224505 ( 13) CGGGGCCGTCCCCTCCCCCCGC 1 chr2:190319719-190320219 ( 72) CTCTTCCCGCTCCGCCTCAGCT 1 chr13:30617613-30618113 ( 23) CCTTCCCCGCCACGCCACCGTC 1 chr10:130110447-13011094 ( 72) CTGCAGATCCTCCGCCCTCCGC 1 chr10:132279913-13228041 ( 15) ACTCTGTGATCACGCCCCTGCA 1 chr21:34889748-34890248 ( 74) TGACGCCCGCTCCTCCCTCCCC 1 chr1:228647592-228648092 ( 26) CCTCTTTTCACACGCCCAAGCC 1 chr19:40465548-40466048 ( 38) TCGAGCCAGCTCCGCCCCGTTG 1 chr1:53220247-53220747 ( 72) GACCCTCGCCACCTCCCCTCCG 1 chr7:103074658-103075158 ( 9) GGGGCGGTGCCACGCCCAGCCC 1 chr21:34615108-34615608 ( 3) GTTATTGTACCCCGCCCTTCCA 1 chr1:163321649-163322149 ( 72) CCCATTCCGCCAAGCCCACGTC 1 chr3:194134780-194135280 ( 74) CACACGCACGCACACACACATC 1 chr7:99465980-99466480 ( 28) GCCTCTGCTCTACGCCCCTGGA 1 chr6:143450485-143450985 ( 4) CTGCCCGCGCTCCTCCTCTGCC 1 chr19:46600818-46601318 ( 40) CGCCGCGCGCCCCGCCTCCCGG 1 chr15:76905015-76905515 ( 52) CTGCGCTACGCACGCCCCTCGC 1 chr16:11915831-11916331 ( 66) AACTTGTAGTTCCACCTCCCGC 1 chr1:155000785-155001285 ( 27) CAAACAGCCCCCCACCCCAGAC 1 chr19:35248561-35249061 ( 12) TCCTCCGAGCCACACTCCACCC 1 chr1:1308031-1308531 ( 74) CCGCCGCCCACACTCCCCGAGC 1 chr19:36572858-36573358 ( 31) CCGTCTCTCACACACACACACC 1 chr5:138464595-138465095 ( 59) CCGACTCGCCCTCGCCCCCGCT 1 chr16:2682227-2682727 ( 24) CGCCCACAGGTCCGCCCTGGTA 1 chr19:41884091-41884591 ( 4) CCGACGACTCTACTCCTCCCGC 1 chr15:72375823-72376323 ( 67) CCCAGGAGGACCCACACCCTGC 1 chr15:82540311-82540811 ( 50) CACCGCCGCCCCCGCTCCACTC 1 chr22:20117188-20117688 ( 13) CATTGTCCGGCCCGCCCCGCGC 1 chr17:16535614-16536114 ( 7) CGTTCCTGGGCCCGCCCAGTGT 1 chr9:100098860-100099360 ( 21) CTGCACTAGCCTCACCCCGCAC 1 chr10:97334658-97335158 ( 34) AATCAGTCCCCACGCCCCGGAC 1 chr17:74514440-74514940 ( 48) CCATCACATGACCACCCATTAC 1 chr17:42154845-42155345 ( 69) TCCCTACCGCCACTCCCGCGTT 1 chr1:46132509-46133009 ( 50) TCCACGCCGTCCCGCCTCGATG 1 chr19:55599898-55600398 ( 54) CGGTCGCGGCCACGCCCGGAAG 1 chr16:1971714-1972214 ( 20) CGGAAACGTCTCCGCCCGCTTC 1 chr19:4723791-4724291 ( 72) CTATACCACCAACGCCCTGATA 1 chr19:41310152-41310652 ( 27) CGCAACCGCACCCACCCGCCGC 1 chr16:30021381-30021881 ( 2) CCCCGACGGCCATTCCCAGCCA 1 chr19:49641775-49642275 ( 57) TCGCGCGGACCCCGCCCCATGT 1 chr19:36139745-36140245 ( 15) CGCACCCCACACCGCCCGGCTA 1 chr5:5422185-5422685 ( 10) CGGGCGGGTCACCGCCCACATA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CMCCCCCVGCCMCGCCCMYYCC MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 22 n= 47400 bayes= 8.63902 E= 2.5e-162 -60 95 -111 -64 38 51 -90 -40 -97 93 -92 -50 8 55 -123 19 -97 93 -126 -11 1 48 -60 -14 -9 69 -123 -1 31 -49 34 -34 -37 -82 85 -79 -122 129 -267 -101 -160 123 -1504 8 112 88 -1504 -334 -592 163 -1504 -492 42 -1504 101 -64 -1504 164 -1504 -1504 -222 157 -1504 -434 -592 148 -1504 -75 69 56 -317 17 -117 59 -90 57 10 36 -95 36 -34 49 -54 6 -17 99 -154 -92 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CMCCCCCVGCCMCGCCCMYYCC MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 22 nsites= 337 E= 2.5e-162 0.118694 0.617211 0.148368 0.115727 0.234421 0.456973 0.172107 0.136499 0.091988 0.611276 0.169139 0.127596 0.189911 0.468843 0.136499 0.204748 0.091988 0.608309 0.133531 0.166172 0.181009 0.445104 0.210682 0.163205 0.169139 0.516320 0.136499 0.178042 0.222552 0.228487 0.406528 0.142433 0.139466 0.181009 0.575668 0.103858 0.077151 0.783383 0.050445 0.089021 0.059347 0.750742 0.000000 0.189911 0.391691 0.590504 0.000000 0.017804 0.002967 0.991098 0.000000 0.005935 0.240356 0.000000 0.643917 0.115727 0.000000 1.000000 0.000000 0.000000 0.038576 0.952522 0.000000 0.008902 0.002967 0.890208 0.000000 0.106825 0.290801 0.471810 0.035608 0.201780 0.080119 0.480712 0.172107 0.267062 0.192878 0.409496 0.166172 0.231454 0.142433 0.451039 0.219585 0.186944 0.160237 0.635015 0.109792 0.094955 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CMCCCCCVGCCMCGCCCMYYCC MEME-1 regular expression -------------------------------------------------------------------------------- C[CA]C[CT]C[CG]C[GCA]GCC[CA]C[GA]CCC[CAT][CT][CT][CG]C -------------------------------------------------------------------------------- Time 548.69 secs. ******************************************************************************** ******************************************************************************** MOTIF TKCTGGGARDTGTAGT MEME-2 width = 16 sites = 25 llr = 392 E-value = 5.8e-037 ******************************************************************************** -------------------------------------------------------------------------------- Motif TKCTGGGARDTGTAGT MEME-2 Description -------------------------------------------------------------------------------- Simplified A :1:::::a43:::a:: pos.-specific C 2192::::1:2::::: probability G :3::aa9:52:a::a: matrix T 8417::::147:a::a bits 2.5 * * 2.2 * ** * 2.0 * ** * 1.7 * * ** * Relative 1.5 * ** * ***** Entropy 1.2 * ***** ***** (22.6 bits) 1.0 * ****** ****** 0.7 * ****** ****** 0.5 * ************** 0.2 **************** 0.0 ---------------- Multilevel TTCTGGGAGTTGTAGT consensus CG C AAC sequence G -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TKCTGGGARDTGTAGT MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ---------------- chr1:156740889-156741389 + 39 1.06e-10 CCCGTCGACT TTCTGGGAGTTGTAGT CCAAGTGTAA chr19:35931416-35931916 + 72 1.45e-10 TCGCGTGGTC TTCTGGGAAATGTAGT TCGTCTGCCA chr17:17591472-17591972 + 84 1.45e-10 TATTCCGGCC TTCTGGGAAATGTAGT T chr16:70439071-70439571 - 64 2.13e-10 GCGCGCTGTC TTCTGGGAGATGTAGT CCTGGATGCG chr19:44259625-44260125 + 25 4.70e-10 CGCTCGGGCA TTCTGGGAAGTGTAGT GCAGAAGCCG chr19:49659763-49660263 + 3 4.70e-10 GC TGCTGGGAGTTGTAGT TTTacacaca chr14:73027009-73027509 - 73 9.26e-10 GCCTCTTCAG TACTGGGAGTTGTAGT CATTCAGAGT chr9:15422495-15422995 + 45 5.82e-09 GCCCATGGCC TGCCGGGAAATGTAGT TTCTGATGCC chr1:185156981-185157481 - 14 7.27e-09 ACTGTATGCC TGCTGGGAAACGTAGT TCTGCGCCCG chr19:41959153-41959653 + 84 1.03e-08 CCGCCGAGTA TTGTGGGAGTTGTAGT C chr7:129224527-129225027 - 26 1.53e-08 CCGCAGCGTC CCCTGGGAGTTGTAGT CCTTTCAGCC chr20:18288026-18288526 + 26 2.09e-08 CTCCAGGGGT CACTGGGAAGTGTAGT TTTCGAGACA chr1:1115923-1116423 - 61 3.14e-08 TCGCGCGGGC CGCCGGGAGTTGTAGT TTTCTTTGGG chr6:30907821-30908321 + 63 4.76e-08 CCACGGTGCC TTTCGGGATTTGTAGT CAGACGCGCT chr12:53727356-53727856 + 72 5.68e-08 CACCGCGGCA TCCTGGGAGGCGTAGT TCTCACTCCT chr20:34676965-34677465 - 51 5.68e-08 CCGCAAGGCT TTCTGGGAGCCGTAGT CCCCACGTCT chr9:100098860-100099360 + 4 8.12e-08 GCA CTTCGGGAAATGTAGT CCTGCACTAG chr1:153958492-153958992 - 27 9.69e-08 TCAGCAGGGC TGCTGGGAAGTGGAGT CCGTTTCCTC chr6:157379844-157380344 + 26 9.69e-08 TCGCGGGGGA TGCAGGGACTTGTAGT TTCTAAGGCC chr3:50292238-50292738 - 59 1.24e-07 GCGCTCAGGC CTCTGGGATTAGTAGT TTTAGCCTCG chr19:1905015-1905515 + 52 2.54e-07 gCGCAGTGCC TACTAGCAATTGTAGT CCTTGCCCCA chr11:78188453-78188953 + 36 2.84e-07 GTGCGCTGCC TTCCGGGACTGGTAGT TCTCTCTGGG chr19:49641775-49642275 - 37 3.74e-07 GCGCGATGCA CGCCGGGAGGCGTAGT CCGCGCACCG chr5:665553-666053 - 78 8.67e-07 GGGGGGG TCCTGGGAGGCGTGGT CAGGAGGGCG chr8:37302610-37303110 - 78 1.14e-06 TGTTTGG TGCTGGAAGATATATT GTGACACAGT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TKCTGGGARDTGTAGT MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr1:156740889-156741389 1.1e-10 38_[+2]_46 chr19:35931416-35931916 1.4e-10 71_[+2]_13 chr17:17591472-17591972 1.4e-10 83_[+2]_1 chr16:70439071-70439571 2.1e-10 63_[-2]_21 chr19:44259625-44260125 4.7e-10 24_[+2]_60 chr19:49659763-49660263 4.7e-10 2_[+2]_82 chr14:73027009-73027509 9.3e-10 72_[-2]_12 chr9:15422495-15422995 5.8e-09 44_[+2]_40 chr1:185156981-185157481 7.3e-09 13_[-2]_71 chr19:41959153-41959653 1e-08 83_[+2]_1 chr7:129224527-129225027 1.5e-08 25_[-2]_59 chr20:18288026-18288526 2.1e-08 25_[+2]_59 chr1:1115923-1116423 3.1e-08 60_[-2]_24 chr6:30907821-30908321 4.8e-08 62_[+2]_22 chr12:53727356-53727856 5.7e-08 71_[+2]_13 chr20:34676965-34677465 5.7e-08 50_[-2]_34 chr9:100098860-100099360 8.1e-08 3_[+2]_81 chr1:153958492-153958992 9.7e-08 26_[-2]_58 chr6:157379844-157380344 9.7e-08 25_[+2]_59 chr3:50292238-50292738 1.2e-07 58_[-2]_26 chr19:1905015-1905515 2.5e-07 51_[+2]_33 chr11:78188453-78188953 2.8e-07 35_[+2]_49 chr19:49641775-49642275 3.7e-07 36_[-2]_48 chr5:665553-666053 8.7e-07 77_[-2]_7 chr8:37302610-37303110 1.1e-06 77_[-2]_7 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TKCTGGGARDTGTAGT MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TKCTGGGARDTGTAGT width=16 seqs=25 chr1:156740889-156741389 ( 39) TTCTGGGAGTTGTAGT 1 chr19:35931416-35931916 ( 72) TTCTGGGAAATGTAGT 1 chr17:17591472-17591972 ( 84) TTCTGGGAAATGTAGT 1 chr16:70439071-70439571 ( 64) TTCTGGGAGATGTAGT 1 chr19:44259625-44260125 ( 25) TTCTGGGAAGTGTAGT 1 chr19:49659763-49660263 ( 3) TGCTGGGAGTTGTAGT 1 chr14:73027009-73027509 ( 73) TACTGGGAGTTGTAGT 1 chr9:15422495-15422995 ( 45) TGCCGGGAAATGTAGT 1 chr1:185156981-185157481 ( 14) TGCTGGGAAACGTAGT 1 chr19:41959153-41959653 ( 84) TTGTGGGAGTTGTAGT 1 chr7:129224527-129225027 ( 26) CCCTGGGAGTTGTAGT 1 chr20:18288026-18288526 ( 26) CACTGGGAAGTGTAGT 1 chr1:1115923-1116423 ( 61) CGCCGGGAGTTGTAGT 1 chr6:30907821-30908321 ( 63) TTTCGGGATTTGTAGT 1 chr12:53727356-53727856 ( 72) TCCTGGGAGGCGTAGT 1 chr20:34676965-34677465 ( 51) TTCTGGGAGCCGTAGT 1 chr9:100098860-100099360 ( 4) CTTCGGGAAATGTAGT 1 chr1:153958492-153958992 ( 27) TGCTGGGAAGTGGAGT 1 chr6:157379844-157380344 ( 26) TGCAGGGACTTGTAGT 1 chr3:50292238-50292738 ( 59) CTCTGGGATTAGTAGT 1 chr19:1905015-1905515 ( 52) TACTAGCAATTGTAGT 1 chr11:78188453-78188953 ( 36) TTCCGGGACTGGTAGT 1 chr19:49641775-49642275 ( 37) CGCCGGGAGGCGTAGT 1 chr5:665553-666053 ( 78) TCCTGGGAGGCGTGGT 1 chr8:37302610-37303110 ( 78) TGCTGGAAGATATATT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TKCTGGGARDTGTAGT MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 16 n= 51000 bayes= 12.1269 E= 5.8e-037 -1129 -42 -1129 208 -58 -141 0 129 -1129 146 -300 -117 -217 -42 -1129 200 -217 -1129 158 -1129 -1129 -1129 164 -1129 -217 -300 152 -1129 247 -1129 -1129 -1129 100 -200 58 -117 64 -300 -42 129 -217 -68 -300 200 -217 -1129 158 -1129 -1129 -1129 -300 242 242 -1129 -300 -1129 -1129 -1129 158 -217 -1129 -1129 -1129 247 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TKCTGGGARDTGTAGT MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 16 nsites= 25 E= 5.8e-037 0.000000 0.240000 0.000000 0.760000 0.120000 0.120000 0.320000 0.440000 0.000000 0.880000 0.040000 0.080000 0.040000 0.240000 0.000000 0.720000 0.040000 0.000000 0.960000 0.000000 0.000000 0.000000 1.000000 0.000000 0.040000 0.040000 0.920000 0.000000 1.000000 0.000000 0.000000 0.000000 0.360000 0.080000 0.480000 0.080000 0.280000 0.040000 0.240000 0.440000 0.040000 0.200000 0.040000 0.720000 0.040000 0.000000 0.960000 0.000000 0.000000 0.000000 0.040000 0.960000 0.960000 0.000000 0.040000 0.000000 0.000000 0.000000 0.960000 0.040000 0.000000 0.000000 0.000000 1.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TKCTGGGARDTGTAGT MEME-2 regular expression -------------------------------------------------------------------------------- [TC][TG]C[TC]GGGA[GA][TAG][TC]GTAGT -------------------------------------------------------------------------------- Time 997.97 secs. ******************************************************************************** ******************************************************************************** MOTIF GRRRGAGRRRGAGGGA MEME-3 width = 16 sites = 74 llr = 797 E-value = 1.2e-040 ******************************************************************************** -------------------------------------------------------------------------------- Motif GRRRGAGRRRGAGGGA MEME-3 Description -------------------------------------------------------------------------------- Simplified A 164429:544171338 pos.-specific C 11::::::1121:1:: probability G 846681a545628671 matrix T ::::::::::1::::: bits 2.5 2.2 2.0 1.7 * Relative 1.5 ** * Entropy 1.2 ** * (15.5 bits) 1.0 * ****** ** ** 0.7 ******** * ** ** 0.5 ********** ***** 0.2 **************** 0.0 ---------------- Multilevel GAGGGAGAGGGAGGGA consensus GAA GAA AA sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GRRRGAGRRRGAGGGA MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ---------------- chr17:47650473-47650973 + 48 1.20e-09 GGTGCAGCGG GAGGGAGAAAGAGGGA GGGAAGGGAA chr12:56079839-56080339 - 49 3.92e-09 GTGTGTGAGA GAGAGAGAGAGAGGGA GGGAGGAACG chr1:234723900-234724400 + 9 8.56e-09 gtgtgtgt gagagagagagagaga gagaaatgga chr1:155244584-155245084 + 66 8.56e-09 gagagcgagc gagagagagagagaga gagagaggag chr10:101442038-10144253 - 25 8.56e-09 GAGACAGAGA GAGAGAGAGAGAGAGA TTCTAATTCA chr19:33080891-33081391 + 31 1.79e-08 CGGGGTTCGC GGAGGAGAAAGAGGAA AGGCGTTTGG chr5:10353477-10353977 - 62 2.57e-08 GGAGAGGGGA GAGGGAGAGGGAGAGA GGCTGACAGA chr7:42237309-42237809 - 49 7.68e-08 GGGAGGAGGA GGAAGAGGAGGAGAGA AGGGAAGGAG chr2:190319719-190320219 + 23 2.25e-07 GGAAATAGTT GAGGGAGAGGAAGGGA TCGGGGACCG chr19:7871843-7872343 + 68 2.25e-07 AGGTGGAGCA GAGGGAGAAGGAGGGG CTAGAGGAAG chr2:97995933-97996433 + 16 2.61e-07 GCTACCTGGC GCAGGAGAAGGAGGGA GGCAGGCCCA chr1:244970534-244971034 - 46 2.61e-07 CCCGGCCTCC GAGGGAGGGGGAAGGA GGACGGGGCG chr17:16535614-16536114 - 63 2.61e-07 CCACGGCCCA GAAAGAGACGCAGGGA GGAGCCCAGC chr10:102114816-10211531 + 48 3.05e-07 TCCCTGAGAG GAAAGAGGAAGAGCAa gggagggagg chr9:135189420-135189920 - 55 3.48e-07 GCTCCTGCCT GAGGGAGAGATAAGGA TGGGCCTCCG chr17:45148268-45148768 + 82 3.94e-07 ggagctgtgg gaagggggaggaggga ggg chr1:155002087-155002587 + 75 4.48e-07 gcggcaggtg aagggagacagagaga aggaaagaag chr5:37371070-37371570 + 18 5.18e-07 TTagggaagg gagggagggaaaggaa gggaaggata chr10:17201398-17201898 - 84 5.97e-07 G GAGGGAGGAGGAGCGA CGGACCGGCA chr17:46192455-46192955 + 76 6.80e-07 TTACAACTAA CAAAGAGAGAGAGAAA TGGGAGCCA chr1:45521696-45522196 + 64 9.78e-07 GGGTGCCGGA GGAGGAGAGAGAGGAG GGGGATGTGG chr1:183471795-183472295 + 49 1.12e-06 TGGAGGCGTG CAAAAAGGAAGAGGGA AATCGGCAGG chr8:10839707-10840207 + 63 1.25e-06 TGGGGAGGTG ACGGGAGAAAGAGGGA CTGAGGGGGC chr12:6765973-6766473 - 20 1.25e-06 AAAGCGAGGG GAGGGAGAGCTAGGGA GTCGGGAGGG chr14:23306553-23307053 - 45 1.57e-06 GGGAGGGAAG GAAGGAGGGAGGAGAA AGGGGGGGGC chr19:49712290-49712790 + 35 1.76e-06 GGCGTGGTCC GAGGGAGAAGAGGAGA GGGACGTGGG chr19:47112068-47112568 - 40 1.76e-06 CGGAGGAGGA GGAGGAGGAGGAGGAG GAGGAAGGGC chr8:123396407-123396907 + 85 1.97e-06 GAGCTCGGCG GAAGGAGACGGTGGGA chr19:35154708-35155208 - 16 1.97e-06 GTAGCCCAGG AGAGGAGGCAGAGAGA TGTGGGCGTG chr15:68277530-68278030 - 8 2.22e-06 GACAGGGCCG GGAGGAGAGGGCGGGA GCGGGAG chr12:49060543-49061043 + 2 2.22e-06 A GGGGGAGAAAGGAGAA GAGGCGGCCC chr19:33795463-33795963 + 15 2.48e-06 cgcaaaggaa acaggaggaagaggaa ggggaggagg chr12:389103-389603 - 82 2.75e-06 AGA GAAGAAGAAGGAAAGG CCAGACACAC chr10:119725664-11972616 + 39 2.75e-06 GAGACACCCG GGAGAAGGCGGAGGAA AGGGCAGGAA chr3:170222090-170222590 - 2 3.05e-06 GGGGGCAGAG AAAGGGGACAGAGGGA A chr17:43842299-43842799 - 20 3.39e-06 GAGAGGCGTG GAGAGAGGGGTGGAGA GGCGTAGAGA chr17:2401394-2401894 - 54 4.21e-06 ACGCACTGCG GGGGGAGGAACGGAGA CAAAACGCGG chr21:32771774-32772274 + 2 5.11e-06 a gagagagagagagagC CCCACACCTC chr1:111755502-111756002 - 12 5.11e-06 AAAGCCCCAA GAGGGAGGAGAGGAAA GATGAGGCAA chr20:44885235-44885735 - 26 5.62e-06 CGGGGGAGCG GGAAAAGGAGGTGGGA GGAGAGAGGG chr19:51367471-51367971 - 39 5.62e-06 AGAGTTCAGA GCGGGAGGAGCAGGAA GGGGCCTGGG chr12:54359108-54359608 + 59 6.90e-06 AAGAGACAGC GAAAGAGAGAGAGCGT GCGAACGAGC chr15:75625564-75626064 - 37 6.90e-06 GTTCGCAAAG GAGGGAGGAGCCGGAA ACTCAGGGCG chr17:7836700-7837200 - 74 7.58e-06 TAAGACCACG GGAAGGGAGAGGGGAA AGAGATGGCA chr19:41859514-41860014 - 66 8.27e-06 AGGGAACCTA GGGGAAGGGCGAGGAA GAAATGTGGC chr17:43842498-43842998 - 41 9.05e-06 GAGAGGCGTG GAGAGAGGCGTGGAGA GGCGTGGAGA chr19:40420968-40421468 - 44 9.05e-06 GGTGCGCATG GAGAGAGGCGCAGGGG GCTGGACGGT chr19:38196245-38196745 + 64 9.05e-06 CAAGGAGGTC AAGGGAGGAGCATGGA GGTCAAGGGC chr12:131224380-13122488 + 15 9.96e-06 GAAATGGCTA GAAAGAGGGGGTGGGG ATAGGATGGA chr16:30021381-30021881 + 56 1.10e-05 TGCAACCTGT GGAAGAGGCGGGAGGA GGCCCGGGAG chr7:103074658-103075158 + 80 1.10e-05 TCACGCCCCG GGGGAAGAGACGGGAA GCTCG chr17:59209720-59210220 + 3 1.10e-05 GG AGAAGAGGAGGCGGAA CTCAAGTGAC chr5:176388756-176389256 + 67 1.30e-05 TGATGTCGGA GGGAAGGAAGTAGAGA AGGACCAGAG chr5:96935747-96936247 - 28 1.30e-05 GTGGCAGCTG CAGAAAGAGCGAGGGA AGCAAGAGGG chr20:58650958-58651458 + 41 1.42e-05 GGGCACTCGC GAGGGACGGACAGGAA GAGGGCCAGG chr20:63350817-63351317 + 18 1.55e-05 GCACTGGGCA GGAAGAGAGCGAAGGG TGTGAGaccc chr12:124917062-12491756 + 82 1.55e-05 TGGCACCAAT GGAGAAGGGACAGAGG CCC chr22:20496057-20496557 - 72 1.55e-05 GTGAATGAGT GAGGGAGGAAGGGAAT GGTGGGTAAG chr19:43463548-43464048 + 25 1.69e-05 CCGTGGACTA GGGAGAGGGACAAGGG CGGGATTAGC chr7:100874780-100875280 - 43 1.69e-05 AGGGCGTGAT GGGAAAGGGGCGGGGA TCTCGCAAGT chr20:33993046-33993546 - 63 1.84e-05 GAAGCTTAGA GTGGGAGGAAGATGGA AGCGGGCCTG chr5:75511589-75512089 + 3 1.84e-05 AA GCAGGAGGAGCGGAGA AAGGAGAGGG chr19:35558010-35558510 + 44 2.00e-05 TTGGCTGCGG AGAGAAGGGGCAAGGA GCGAAGCCCC chr5:173887812-173888312 + 32 2.00e-05 GCCCAGTTAG GGAAGAGAAATATCAA AGGAGTCCCT chr20:33709959-33710459 - 5 2.16e-05 GTTCTGTATA GAGGTAGGAGTGGGGA AAGG chr17:42388512-42389012 + 66 2.35e-05 CACAGAAGCC CGGGGGGAGGGAGGGA AGATGACCGG chr12:12724541-12725041 + 77 2.55e-05 CCTCTCAGCC AAAAGGGAGGTAAAAA ATCCTGCG chr5:180810315-180810815 - 84 2.55e-05 G GAGGGAGAGGGCAGGG CTGCACCGCA chr19:38975154-38975654 + 65 3.23e-05 GCCTCAGGCC GAGGGAGGGCCCGGGA AAGCGACGCT chr1:228139955-228140455 + 26 3.47e-05 CCTAAGGGGC GGGGAAGAACGAGTGA GACATGGGCG chr5:137754343-137754843 - 63 3.47e-05 GGTGGTGCGC GGAGGGCAGGGAGGGA CCCATGTCAA chr4:77075910-77076410 + 81 4.05e-05 CGTTGGCACT AGGATGGAAGGAGGGA GGAC chr9:127771247-127771747 - 16 4.37e-05 TGACTGATGG GGAGGGGGCGGAGCGA GACCGCAGGC chr10:93702422-93702922 + 83 4.70e-05 AAACGGCCCG GAAAGGGACGAAGAGG CT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GRRRGAGRRRGAGGGA MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr17:47650473-47650973 1.2e-09 47_[+3]_37 chr12:56079839-56080339 3.9e-09 48_[-3]_36 chr1:234723900-234724400 8.6e-09 8_[+3]_76 chr1:155244584-155245084 8.6e-09 65_[+3]_19 chr10:101442038-10144253 8.6e-09 24_[-3]_60 chr19:33080891-33081391 1.8e-08 30_[+3]_54 chr5:10353477-10353977 2.6e-08 61_[-3]_23 chr7:42237309-42237809 7.7e-08 48_[-3]_36 chr2:190319719-190320219 2.3e-07 22_[+3]_62 chr19:7871843-7872343 2.3e-07 67_[+3]_17 chr2:97995933-97996433 2.6e-07 15_[+3]_69 chr1:244970534-244971034 2.6e-07 45_[-3]_39 chr17:16535614-16536114 2.6e-07 62_[-3]_22 chr10:102114816-10211531 3e-07 47_[+3]_37 chr9:135189420-135189920 3.5e-07 54_[-3]_30 chr17:45148268-45148768 3.9e-07 81_[+3]_3 chr1:155002087-155002587 4.5e-07 74_[+3]_10 chr5:37371070-37371570 5.2e-07 17_[+3]_67 chr10:17201398-17201898 6e-07 83_[-3]_1 chr17:46192455-46192955 6.8e-07 75_[+3]_9 chr1:45521696-45522196 9.8e-07 63_[+3]_21 chr1:183471795-183472295 1.1e-06 48_[+3]_36 chr8:10839707-10840207 1.3e-06 62_[+3]_22 chr12:6765973-6766473 1.3e-06 19_[-3]_65 chr14:23306553-23307053 1.6e-06 44_[-3]_40 chr19:49712290-49712790 1.8e-06 34_[+3]_50 chr19:47112068-47112568 1.8e-06 39_[-3]_45 chr8:123396407-123396907 2e-06 84_[+3] chr19:35154708-35155208 2e-06 15_[-3]_69 chr15:68277530-68278030 2.2e-06 7_[-3]_77 chr12:49060543-49061043 2.2e-06 1_[+3]_83 chr19:33795463-33795963 2.5e-06 14_[+3]_70 chr12:389103-389603 2.7e-06 81_[-3]_3 chr10:119725664-11972616 2.7e-06 38_[+3]_46 chr3:170222090-170222590 3e-06 1_[-3]_83 chr17:43842299-43842799 3.4e-06 19_[-3]_65 chr17:2401394-2401894 4.2e-06 53_[-3]_31 chr21:32771774-32772274 5.1e-06 1_[+3]_83 chr1:111755502-111756002 5.1e-06 11_[-3]_73 chr20:44885235-44885735 5.6e-06 25_[-3]_59 chr19:51367471-51367971 5.6e-06 38_[-3]_46 chr12:54359108-54359608 6.9e-06 58_[+3]_26 chr15:75625564-75626064 6.9e-06 36_[-3]_48 chr17:7836700-7837200 7.6e-06 73_[-3]_11 chr19:41859514-41860014 8.3e-06 65_[-3]_19 chr17:43842498-43842998 9.1e-06 40_[-3]_44 chr19:40420968-40421468 9.1e-06 43_[-3]_41 chr19:38196245-38196745 9.1e-06 63_[+3]_21 chr12:131224380-13122488 1e-05 14_[+3]_70 chr16:30021381-30021881 1.1e-05 55_[+3]_29 chr7:103074658-103075158 1.1e-05 79_[+3]_5 chr17:59209720-59210220 1.1e-05 2_[+3]_82 chr5:176388756-176389256 1.3e-05 66_[+3]_18 chr5:96935747-96936247 1.3e-05 27_[-3]_57 chr20:58650958-58651458 1.4e-05 40_[+3]_44 chr20:63350817-63351317 1.5e-05 17_[+3]_67 chr12:124917062-12491756 1.5e-05 81_[+3]_3 chr22:20496057-20496557 1.5e-05 71_[-3]_13 chr19:43463548-43464048 1.7e-05 24_[+3]_60 chr7:100874780-100875280 1.7e-05 42_[-3]_42 chr20:33993046-33993546 1.8e-05 62_[-3]_22 chr5:75511589-75512089 1.8e-05 2_[+3]_82 chr19:35558010-35558510 2e-05 43_[+3]_41 chr5:173887812-173888312 2e-05 31_[+3]_53 chr20:33709959-33710459 2.2e-05 4_[-3]_80 chr17:42388512-42389012 2.3e-05 65_[+3]_19 chr12:12724541-12725041 2.5e-05 76_[+3]_8 chr5:180810315-180810815 2.5e-05 83_[-3]_1 chr19:38975154-38975654 3.2e-05 64_[+3]_20 chr1:228139955-228140455 3.5e-05 25_[+3]_59 chr5:137754343-137754843 3.5e-05 62_[-3]_22 chr4:77075910-77076410 4.1e-05 80_[+3]_4 chr9:127771247-127771747 4.4e-05 15_[-3]_69 chr10:93702422-93702922 4.7e-05 82_[+3]_2 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GRRRGAGRRRGAGGGA MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF GRRRGAGRRRGAGGGA width=16 seqs=74 chr17:47650473-47650973 ( 48) GAGGGAGAAAGAGGGA 1 chr12:56079839-56080339 ( 49) GAGAGAGAGAGAGGGA 1 chr1:234723900-234724400 ( 9) GAGAGAGAGAGAGAGA 1 chr1:155244584-155245084 ( 66) GAGAGAGAGAGAGAGA 1 chr10:101442038-10144253 ( 25) GAGAGAGAGAGAGAGA 1 chr19:33080891-33081391 ( 31) GGAGGAGAAAGAGGAA 1 chr5:10353477-10353977 ( 62) GAGGGAGAGGGAGAGA 1 chr7:42237309-42237809 ( 49) GGAAGAGGAGGAGAGA 1 chr2:190319719-190320219 ( 23) GAGGGAGAGGAAGGGA 1 chr19:7871843-7872343 ( 68) GAGGGAGAAGGAGGGG 1 chr2:97995933-97996433 ( 16) GCAGGAGAAGGAGGGA 1 chr1:244970534-244971034 ( 46) GAGGGAGGGGGAAGGA 1 chr17:16535614-16536114 ( 63) GAAAGAGACGCAGGGA 1 chr10:102114816-10211531 ( 48) GAAAGAGGAAGAGCAA 1 chr9:135189420-135189920 ( 55) GAGGGAGAGATAAGGA 1 chr17:45148268-45148768 ( 82) GAAGGGGGAGGAGGGA 1 chr1:155002087-155002587 ( 75) AAGGGAGACAGAGAGA 1 chr5:37371070-37371570 ( 18) GAGGGAGGGAAAGGAA 1 chr10:17201398-17201898 ( 84) GAGGGAGGAGGAGCGA 1 chr17:46192455-46192955 ( 76) CAAAGAGAGAGAGAAA 1 chr1:45521696-45522196 ( 64) GGAGGAGAGAGAGGAG 1 chr1:183471795-183472295 ( 49) CAAAAAGGAAGAGGGA 1 chr8:10839707-10840207 ( 63) ACGGGAGAAAGAGGGA 1 chr12:6765973-6766473 ( 20) GAGGGAGAGCTAGGGA 1 chr14:23306553-23307053 ( 45) GAAGGAGGGAGGAGAA 1 chr19:49712290-49712790 ( 35) GAGGGAGAAGAGGAGA 1 chr19:47112068-47112568 ( 40) GGAGGAGGAGGAGGAG 1 chr8:123396407-123396907 ( 85) GAAGGAGACGGTGGGA 1 chr19:35154708-35155208 ( 16) AGAGGAGGCAGAGAGA 1 chr15:68277530-68278030 ( 8) GGAGGAGAGGGCGGGA 1 chr12:49060543-49061043 ( 2) GGGGGAGAAAGGAGAA 1 chr19:33795463-33795963 ( 15) ACAGGAGGAAGAGGAA 1 chr12:389103-389603 ( 82) GAAGAAGAAGGAAAGG 1 chr10:119725664-11972616 ( 39) GGAGAAGGCGGAGGAA 1 chr3:170222090-170222590 ( 2) AAAGGGGACAGAGGGA 1 chr17:43842299-43842799 ( 20) GAGAGAGGGGTGGAGA 1 chr17:2401394-2401894 ( 54) GGGGGAGGAACGGAGA 1 chr21:32771774-32772274 ( 2) GAGAGAGAGAGAGAGC 1 chr1:111755502-111756002 ( 12) GAGGGAGGAGAGGAAA 1 chr20:44885235-44885735 ( 26) GGAAAAGGAGGTGGGA 1 chr19:51367471-51367971 ( 39) GCGGGAGGAGCAGGAA 1 chr12:54359108-54359608 ( 59) GAAAGAGAGAGAGCGT 1 chr15:75625564-75626064 ( 37) GAGGGAGGAGCCGGAA 1 chr17:7836700-7837200 ( 74) GGAAGGGAGAGGGGAA 1 chr19:41859514-41860014 ( 66) GGGGAAGGGCGAGGAA 1 chr17:43842498-43842998 ( 41) GAGAGAGGCGTGGAGA 1 chr19:40420968-40421468 ( 44) GAGAGAGGCGCAGGGG 1 chr19:38196245-38196745 ( 64) AAGGGAGGAGCATGGA 1 chr12:131224380-13122488 ( 15) GAAAGAGGGGGTGGGG 1 chr16:30021381-30021881 ( 56) GGAAGAGGCGGGAGGA 1 chr7:103074658-103075158 ( 80) GGGGAAGAGACGGGAA 1 chr17:59209720-59210220 ( 3) AGAAGAGGAGGCGGAA 1 chr5:176388756-176389256 ( 67) GGGAAGGAAGTAGAGA 1 chr5:96935747-96936247 ( 28) CAGAAAGAGCGAGGGA 1 chr20:58650958-58651458 ( 41) GAGGGACGGACAGGAA 1 chr20:63350817-63351317 ( 18) GGAAGAGAGCGAAGGG 1 chr12:124917062-12491756 ( 82) GGAGAAGGGACAGAGG 1 chr22:20496057-20496557 ( 72) GAGGGAGGAAGGGAAT 1 chr19:43463548-43464048 ( 25) GGGAGAGGGACAAGGG 1 chr7:100874780-100875280 ( 43) GGGAAAGGGGCGGGGA 1 chr20:33993046-33993546 ( 63) GTGGGAGGAAGATGGA 1 chr5:75511589-75512089 ( 3) GCAGGAGGAGCGGAGA 1 chr19:35558010-35558510 ( 44) AGAGAAGGGGCAAGGA 1 chr5:173887812-173888312 ( 32) GGAAGAGAAATATCAA 1 chr20:33709959-33710459 ( 5) GAGGTAGGAGTGGGGA 1 chr17:42388512-42389012 ( 66) CGGGGGGAGGGAGGGA 1 chr12:12724541-12725041 ( 77) AAAAGGGAGGTAAAAA 1 chr5:180810315-180810815 ( 84) GAGGGAGAGGGCAGGG 1 chr19:38975154-38975654 ( 65) GAGGGAGGGCCCGGGA 1 chr1:228139955-228140455 ( 26) GGGGAAGAACGAGTGA 1 chr5:137754343-137754843 ( 63) GGAGGGCAGGGAGGGA 1 chr4:77075910-77076410 ( 81) AGGATGGAAGGAGGGA 1 chr9:127771247-127771747 ( 16) GGAGGGGGCGGAGCGA 1 chr10:93702422-93702922 ( 83) GAAAGGGACGAAGAGG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GRRRGAGRRRGAGGGA MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 16 n= 51000 bayes= 10.3008 E= 1.2e-040 -41 -257 134 -1285 162 -224 19 -373 131 -1285 79 -1285 107 -1285 96 -1285 -15 -1285 134 -273 227 -1285 -124 -1285 -1285 -356 160 -1285 151 -1285 60 -1285 117 -111 48 -1285 117 -198 68 -1285 -141 -76 99 -73 197 -224 -76 -215 -28 -1285 134 -215 66 -224 99 -373 66 -1285 116 -1285 217 -456 -111 -273 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GRRRGAGRRRGAGGGA MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 16 nsites= 74 E= 1.2e-040 0.135135 0.054054 0.810811 0.000000 0.554054 0.067568 0.364865 0.013514 0.445946 0.000000 0.554054 0.000000 0.378378 0.000000 0.621622 0.000000 0.162162 0.000000 0.810811 0.027027 0.864865 0.000000 0.135135 0.000000 0.000000 0.027027 0.972973 0.000000 0.513514 0.000000 0.486486 0.000000 0.405405 0.148649 0.445946 0.000000 0.405405 0.081081 0.513514 0.000000 0.067568 0.189189 0.635135 0.108108 0.702703 0.067568 0.189189 0.040541 0.148649 0.000000 0.810811 0.040541 0.283784 0.067568 0.635135 0.013514 0.283784 0.000000 0.716216 0.000000 0.810811 0.013514 0.148649 0.027027 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GRRRGAGRRRGAGGGA MEME-3 regular expression -------------------------------------------------------------------------------- G[AG][GA][GA]GAG[AG][GA][GA]GAG[GA][GA]A -------------------------------------------------------------------------------- Time 1414.24 secs. ******************************************************************************** ******************************************************************************** MOTIF WAWTHDGNYABWWTKRTHWBWTWTTTDYDBDDHDTWDBWYWTW MEME-4 width = 43 sites = 30 llr = 516 E-value = 4.8e-023 ******************************************************************************** -------------------------------------------------------------------------------- Motif WAWTHDGNYABWWTKRTHWBWTWTTTDYDBDDHDTWDBWYWTW MEME-4 Description -------------------------------------------------------------------------------- Simplified A 564:221326133225233:416:1:32324323252:52516 pos.-specific C 11:231123231:::::3132211211512113:1:1314111 probability G 111213631131125321131::1213:2422:3113311:1: matrix T 3166442341355631535547376833423344544433563 bits 2.5 2.2 2.0 1.7 Relative 1.5 Entropy 1.2 * * * (24.8 bits) 1.0 * * *** * * * 0.7 **** *** * * *** * * * * *** 0.5 **** * ****** ******** * * **** ** *** 0.2 ******* ** ****************** ************* 0.0 ------------------------------------------- Multilevel AATTTTGATACTTTGATTTTATATTTACTGAATTTATTACATA consensus T AGCGTGCCGAAATGAAACTCT C GTATTTCGATGCTTT T sequence AA T T GA GC G TAGCGGAA AG A C -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WAWTHDGNYABWWTKRTHWBWTWTTTDYDBDDHDTWDBWYWTW MEME-4 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ------------------------------------------- chrUn_KI270467v1:2896-33 + 32 3.52e-19 tataatacat aatttgggtactttgatattttatgtacagtatgtaatatata ttttgagtat chrUn_KI270466v1:187-687 + 47 7.97e-16 cataatacat attttgtgtactttgatattttatgtacagcatataatatata tttggggtat chrUn_KI270467v1:2000-25 + 11 2.39e-13 tataatatat atttggtgtactttgagattttatgtacagaatataatatatc tttcatgtac chr6:43321918-43322418 - 14 2.23e-11 GTTTTGTTTT TATTCATCTCAAAGTGTTTTATACCTTCTTTTATGAGTTCTTT GACTCATTGA chr21:29217711-29218211 + 16 3.16e-11 ATTTTCCTGG AATTACATCATATTGATGACACATTTATGCGCCTTTGCAATTA CAAAATTCCT chr19:42889589-42890089 - 49 1.21e-10 GTTAAGTGG AATCATGCAATGTTTGTCTTTTTGAGTCTGATTATTTCACTTA GCAGAAAGAA chr15:66504778-66505278 - 43 1.68e-10 CCCTATGGAT TATTCCGCAAAAAGGAGTCCCTATTTTCTAAGAATTATTATTA CGTTTGGAAG chr5:59303274-59303774 + 19 3.18e-10 ggtttttcca aagttatcttctaaaatttcatagtttcacgtcttaggtttaa gcccttaatc chr17:77233792-77234292 - 43 2.18e-09 CCTCATCCCT CTATTTGTCAGAATGAACTCATTTTTGCTGACCTCATCCCTGT ATTTGTCAGA chr12:131710731-13171123 - 41 2.65e-09 GGCTTGGAGC TCTTTTAGCCGCTAGGAAATATTTTGGCTTTAATTTTCGCATT CAGGTGTGCC chr14:99821631-99822131 + 3 2.92e-09 GC TAATATGTCGGTTTTATAATGTACTTCTGTGGCTAACCACAGA CCACTGGCAG chr3:181328956-181329456 + 22 3.54e-09 CTTGGTAGTA AATGGATTTACAATGTGAGTCTTTCTGCACTCAATTTCACTTT ATTGCCTCTT chr4:72112451-72112951 + 20 8.23e-09 GCATGAAAAG ACATATGACACTTGTGAGTCATATGTCTCATATGTCTCACAAT GAGTCATGTT chr5:124740978-124741478 - 41 9.02e-09 AAAACATGAT AAATTGGACCTTATGAAACCTAATTAAATCAATGAGTGTTCTA CTCCTTTATG chr19:38975154-38975654 + 7 1.42e-08 CTTCCA GATTTAGGGCTTTCTAACGTGCATTTGTATAACTTTGGGTTTA AAGGAGCCTC chr10:75379145-75379645 + 30 1.55e-08 AGCATGATTT ACTTCGGATGGATAATAATGTCATTTGCTTGATGCAGTAGATC TGTTTACGAG chr1:125179942-125180442 + 32 1.70e-08 GATTCTCTTC GATTCCATTCGATAATTCCGTTTTTTTCCGTTTGGTGTTGATA CCATTCGATT chr9:85743205-85743705 + 18 1.86e-08 TCCAATCACA TAGTTTGCCACAAGAGTGAGTGATTTATGTTTTGCGGTAATTA AGAACTTAGA chr12:56041719-56042219 - 32 2.64e-08 CTAGGGTGGA AATGCGTTCCTAGTGTTTATTTATCCATGGAACAAAGTGCACA TGGGACTATT chr12:31749184-31749684 - 52 2.89e-08 AAGCGC TATTGTGAAACCTGAGACTGATCTCTGAGATATTTTTCAGACT TTGCCTTCAG chrX:53225072-53225572 + 55 3.15e-08 AGACCGAGCT AAATAGGCTGGTATGGGTTTCTATTTGGAAGGGGTTACTCAAA AGT chr21:43857381-43857881 - 1 4.44e-08 ATGAGTCACT ACACCCGACAGATTTGTTTGTTTATTTTTGAGATAGAGTTTTG chr10:93208998-93209498 + 40 4.83e-08 TCTCACTGCT TATGATCTGTTTATGATCTCACTGCTTATGATCTCACTGCTTA TGATCTCACT chr6:82260147-82260647 + 17 5.26e-08 ACAAGACCTT CTAGTTGTGACTTGAATTTGATATTCAACCACTTAACCTAAGA CCCATTACTT chr1:27490009-27490509 - 35 5.73e-08 AGGGTACCCG TGAGTACGTCTTTTGCGTAGTTATTTAACTGGCGTTTTACTCA GGCCAATGGA chr10:87845991-87846491 + 23 6.23e-08 atgtcacgca agactAGATAATGAGGGAATCCTTTTCCTCCTAATTGGTTATT TGAGCTGTTT chr19:40920926-40921426 + 9 1.21e-07 CCTCATAA AAATCAGGATTGTTTATCTTATCCTCCTGGGTCAAAGTAACTT CTGGGCTCAG chr5:14156534-14157034 - 56 1.67e-07 GG GAACTGCAGAGCATTACTTCATCTGTTTTGTTTGGATGACTAA CTGACAAGGC chr8:37302610-37303110 - 8 2.68e-07 TTTCTAAGCT TGTCCTGGAAGTGTTATTGGCATTCTAATGATTTATTGCATGT TCCAGTT chr17:78558299-78558799 - 35 1.29e-06 ACCCACCCGT GGTGATGACAATGATGTCATACACATGCAATGATGATGTCATC CACCCATGAG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WAWTHDGNYABWWTKRTHWBWTWTTTDYDBDDHDTWDBWYWTW MEME-4 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrUn_KI270467v1:2896-33 3.5e-19 31_[+4]_26 chrUn_KI270466v1:187-687 8e-16 46_[+4]_11 chrUn_KI270467v1:2000-25 2.4e-13 10_[+4]_47 chr6:43321918-43322418 2.2e-11 13_[-4]_44 chr21:29217711-29218211 3.2e-11 15_[+4]_42 chr19:42889589-42890089 1.2e-10 48_[-4]_9 chr15:66504778-66505278 1.7e-10 42_[-4]_15 chr5:59303274-59303774 3.2e-10 18_[+4]_39 chr17:77233792-77234292 2.2e-09 42_[-4]_15 chr12:131710731-13171123 2.7e-09 40_[-4]_17 chr14:99821631-99822131 2.9e-09 2_[+4]_55 chr3:181328956-181329456 3.5e-09 21_[+4]_36 chr4:72112451-72112951 8.2e-09 19_[+4]_38 chr5:124740978-124741478 9e-09 40_[-4]_17 chr19:38975154-38975654 1.4e-08 6_[+4]_51 chr10:75379145-75379645 1.6e-08 29_[+4]_28 chr1:125179942-125180442 1.7e-08 31_[+4]_26 chr9:85743205-85743705 1.9e-08 17_[+4]_40 chr12:56041719-56042219 2.6e-08 31_[-4]_26 chr12:31749184-31749684 2.9e-08 51_[-4]_6 chrX:53225072-53225572 3.1e-08 54_[+4]_3 chr21:43857381-43857881 4.4e-08 [-4]_57 chr10:93208998-93209498 4.8e-08 39_[+4]_18 chr6:82260147-82260647 5.3e-08 16_[+4]_41 chr1:27490009-27490509 5.7e-08 34_[-4]_23 chr10:87845991-87846491 6.2e-08 22_[+4]_35 chr19:40920926-40921426 1.2e-07 8_[+4]_49 chr5:14156534-14157034 1.7e-07 55_[-4]_2 chr8:37302610-37303110 2.7e-07 7_[-4]_50 chr17:78558299-78558799 1.3e-06 34_[-4]_23 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WAWTHDGNYABWWTKRTHWBWTWTTTDYDBDDHDTWDBWYWTW MEME-4 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF WAWTHDGNYABWWTKRTHWBWTWTTTDYDBDDHDTWDBWYWTW width=43 seqs=30 chrUn_KI270467v1:2896-33 ( 32) AATTTGGGTACTTTGATATTTTATGTACAGTATGTAATATATA 1 chrUn_KI270466v1:187-687 ( 47) ATTTTGTGTACTTTGATATTTTATGTACAGCATATAATATATA 1 chrUn_KI270467v1:2000-25 ( 11) ATTTGGTGTACTTTGAGATTTTATGTACAGAATATAATATATC 1 chr6:43321918-43322418 ( 14) TATTCATCTCAAAGTGTTTTATACCTTCTTTTATGAGTTCTTT 1 chr21:29217711-29218211 ( 16) AATTACATCATATTGATGACACATTTATGCGCCTTTGCAATTA 1 chr19:42889589-42890089 ( 49) AATCATGCAATGTTTGTCTTTTTGAGTCTGATTATTTCACTTA 1 chr15:66504778-66505278 ( 43) TATTCCGCAAAAAGGAGTCCCTATTTTCTAAGAATTATTATTA 1 chr5:59303274-59303774 ( 19) AAGTTATCTTCTAAAATTTCATAGTTTCACGTCTTAGGTTTAA 1 chr17:77233792-77234292 ( 43) CTATTTGTCAGAATGAACTCATTTTTGCTGACCTCATCCCTGT 1 chr12:131710731-13171123 ( 41) TCTTTTAGCCGCTAGGAAATATTTTGGCTTTAATTTTCGCATT 1 chr14:99821631-99822131 ( 3) TAATATGTCGGTTTTATAATGTACTTCTGTGGCTAACCACAGA 1 chr3:181328956-181329456 ( 22) AATGGATTTACAATGTGAGTCTTTCTGCACTCAATTTCACTTT 1 chr4:72112451-72112951 ( 20) ACATATGACACTTGTGAGTCATATGTCTCATATGTCTCACAAT 1 chr5:124740978-124741478 ( 41) AAATTGGACCTTATGAAACCTAATTAAATCAATGAGTGTTCTA 1 chr19:38975154-38975654 ( 7) GATTTAGGGCTTTCTAACGTGCATTTGTATAACTTTGGGTTTA 1 chr10:75379145-75379645 ( 30) ACTTCGGATGGATAATAATGTCATTTGCTTGATGCAGTAGATC 1 chr1:125179942-125180442 ( 32) GATTCCATTCGATAATTCCGTTTTTTTCCGTTTGGTGTTGATA 1 chr9:85743205-85743705 ( 18) TAGTTTGCCACAAGAGTGAGTGATTTATGTTTTGCGGTAATTA 1 chr12:56041719-56042219 ( 32) AATGCGTTCCTAGTGTTTATTTATCCATGGAACAAAGTGCACA 1 chr12:31749184-31749684 ( 52) TATTGTGAAACCTGAGACTGATCTCTGAGATATTTTTCAGACT 1 chrX:53225072-53225572 ( 55) AAATAGGCTGGTATGGGTTTCTATTTGGAAGGGGTTACTCAAA 1 chr21:43857381-43857881 ( 1) ACACCCGACAGATTTGTTTGTTTATTTTTGAGATAGAGTTTTG 1 chr10:93208998-93209498 ( 40) TATGATCTGTTTATGATCTCACTGCTTATGATCTCACTGCTTA 1 chr6:82260147-82260647 ( 17) CTAGTTGTGACTTGAATTTGATATTCAACCACTTAACCTAAGA 1 chr1:27490009-27490509 ( 35) TGAGTACGTCTTTTGCGTAGTTATTTAACTGGCGTTTTACTCA 1 chr10:87845991-87846491 ( 23) AGACTAGATAATGAGGGAATCCTTTTCCTCCTAATTGGTTATT 1 chr19:40920926-40921426 ( 9) AAATCAGGATTGTTTATCTTATCCTCCTGGGTCAAAGTAACTT 1 chr5:14156534-14157034 ( 56) GAACTGCAGAGCATTACTTCATCTGTTTTGTTTGGATGACTAA 1 chr8:37302610-37303110 ( 8) TGTCCTGGAAGTGTTATTGGCATTCTAATGATTTATTGCATGT 1 chr17:78558299-78558799 ( 35) GGTGATGACAATGATGTCATACACATGCAATGATGATGTCATC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WAWTHDGNYABWWTKRTHWBWTWTTTDYDBDDHDTWDBWYWTW MEME-4 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 43 n= 34800 bayes= 11.454 E= 4.8e-023 147 -226 -126 74 174 -126 -126 -43 103 -1155 -226 165 -1155 -94 -68 182 38 -26 -168 115 38 -126 -26 103 -85 -168 91 15 57 -68 -26 57 -11 6 -126 103 165 -46 -168 -85 -43 -9 -9 57 89 -168 -226 147 89 -1155 -126 157 15 -326 -68 165 15 -1155 54 89 147 -326 6 -43 38 -326 -68 157 74 -26 -168 89 57 -168 -168 157 -1155 -26 -26 137 115 -94 -226 103 -143 -68 -326 196 174 -168 -1155 74 -243 -126 -168 203 -143 -68 -94 165 -243 -168 -226 215 89 -126 -26 57 15 54 -326 74 57 -126 -68 115 -11 -68 32 38 103 -226 -46 89 89 -126 -68 89 38 -9 -326 127 57 -1155 -9 127 38 -126 -126 147 137 -326 -168 115 15 -168 6 103 -1155 6 -26 115 137 -226 -126 89 15 44 -168 57 137 -226 -1155 137 -43 -168 -126 182 165 -168 -326 74 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WAWTHDGNYABWWTKRTHWBWTWTTTDYDBDDHDTWDBWYWTW MEME-4 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 43 nsites= 30 E= 4.8e-023 0.500000 0.066667 0.133333 0.300000 0.600000 0.133333 0.133333 0.133333 0.366667 0.000000 0.066667 0.566667 0.000000 0.166667 0.200000 0.633333 0.233333 0.266667 0.100000 0.400000 0.233333 0.133333 0.266667 0.366667 0.100000 0.100000 0.600000 0.200000 0.266667 0.200000 0.266667 0.266667 0.166667 0.333333 0.133333 0.366667 0.566667 0.233333 0.100000 0.100000 0.133333 0.300000 0.300000 0.266667 0.333333 0.100000 0.066667 0.500000 0.333333 0.000000 0.133333 0.533333 0.200000 0.033333 0.200000 0.566667 0.200000 0.000000 0.466667 0.333333 0.500000 0.033333 0.333333 0.133333 0.233333 0.033333 0.200000 0.533333 0.300000 0.266667 0.100000 0.333333 0.266667 0.100000 0.100000 0.533333 0.000000 0.266667 0.266667 0.466667 0.400000 0.166667 0.066667 0.366667 0.066667 0.200000 0.033333 0.700000 0.600000 0.100000 0.000000 0.300000 0.033333 0.133333 0.100000 0.733333 0.066667 0.200000 0.166667 0.566667 0.033333 0.100000 0.066667 0.800000 0.333333 0.133333 0.266667 0.266667 0.200000 0.466667 0.033333 0.300000 0.266667 0.133333 0.200000 0.400000 0.166667 0.200000 0.400000 0.233333 0.366667 0.066667 0.233333 0.333333 0.333333 0.133333 0.200000 0.333333 0.233333 0.300000 0.033333 0.433333 0.266667 0.000000 0.300000 0.433333 0.233333 0.133333 0.133333 0.500000 0.466667 0.033333 0.100000 0.400000 0.200000 0.100000 0.333333 0.366667 0.000000 0.333333 0.266667 0.400000 0.466667 0.066667 0.133333 0.333333 0.200000 0.433333 0.100000 0.266667 0.466667 0.066667 0.000000 0.466667 0.133333 0.100000 0.133333 0.633333 0.566667 0.100000 0.033333 0.300000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WAWTHDGNYABWWTKRTHWBWTWTTTDYDBDDHDTWDBWYWTW MEME-4 regular expression -------------------------------------------------------------------------------- [AT]A[TA][TG][TCA][TGA][GT][AGTC][TC][AC][CGT][TA][TA][TAG][GTA][AG][TAG][TAC][TA][TCG][AT][TC][AT]T[TC]T[AGT][CTA][TAG][GTC][ATG][ATG][TCA][TGA][TA][AT][TGA][TCG][AT][CTA][AT]T[AT] -------------------------------------------------------------------------------- Time 1820.85 secs. ******************************************************************************** ******************************************************************************** MOTIF CCWCACCSRKGCACACCCWCACCCRSRCACA MEME-5 width = 31 sites = 10 llr = 252 E-value = 2.4e-015 ******************************************************************************** -------------------------------------------------------------------------------- Motif CCWCACCSRKGCACACCCWCACCCRSRCACA MEME-5 Description -------------------------------------------------------------------------------- Simplified A 2:6:8:2:4:2:8:a12:5:8:3:5:6:9:8 pos.-specific C 68:9196611:82a:78a:a:a78:5:91a1 probability G :1:11:23468::::1::::1::15531::1 matrix T 214::1:113:2:::1::5:1::1::1:::: bits 2.5 * 2.2 * 2.0 * * 1.7 ** * * * ** Relative 1.5 * * *** ***** *** Entropy 1.2 **** *** ***** **** (36.4 bits) 1.0 **** ***** ******* * ***** 0.7 ***** ***** *************** 0.5 ******** ********************** 0.2 ******************************* 0.0 ------------------------------- Multilevel CCACACCCAGGCACACCCACACCCACACACA consensus A T AGGTATC A T A GGG sequence T G -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCWCACCSRKGCACACCCWCACCCRSRCACA MEME-5 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ------------------------------- chr12:132303862-13230436 + 17 4.90e-16 CTGGGCACAG CCTCACCGGGGCACACCCTCACCCAGACACA GCCTCACCCG chr12:132305394-13230589 + 5 4.84e-15 ACAA CCTCACCCGGGCACACCCTCACCCGGGCACA CCCTCACCCG chr12:132305192-13230569 + 63 5.08e-13 CCAGACACAG CCTGACCTGGGCACACCCTCACCCGGGCACA CCCTCAC chr19:49659763-49660263 + 20 5.60e-13 AGTTGTAGTT TTacacacacacacacacacacacacacaca cacacacaca chr2:241881425-241881925 - 3 1.08e-12 TCGCGCGTGG CCACACCCCTGTCCAGCCACACACACACACA CA chr7:1011242-1011742 + 57 1.85e-12 tcacacgccc agacaccctgacacacccacacccagacacc tgcagacacc chr12:132304551-13230505 + 64 3.36e-12 CTGGGCACAC CCTCGCCCGGGCACACCCTCGCCCGGGCACA CCCTCA chr19:42283167-42283667 - 53 1.08e-11 ACATACCTGC TCACACAGATGTACAACCTCACACGCTCACG GTCCATCGCT chr16:89142383-89142883 + 48 2.04e-11 GCAGACACCT ACACCTGCAGGCACACCCACACCTGCAGACA GAGCCACACC chr7:158084723-158085223 + 60 1.43e-10 CGACGCCCAT CCACACGGATGCCCATACACTCCGACACCCA TCCACACCCA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCWCACCSRKGCACACCCWCACCCRSRCACA MEME-5 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr12:132303862-13230436 4.9e-16 16_[+5]_53 chr12:132305394-13230589 4.8e-15 4_[+5]_65 chr12:132305192-13230569 5.1e-13 62_[+5]_7 chr19:49659763-49660263 5.6e-13 19_[+5]_50 chr2:241881425-241881925 1.1e-12 2_[-5]_67 chr7:1011242-1011742 1.9e-12 56_[+5]_13 chr12:132304551-13230505 3.4e-12 63_[+5]_6 chr19:42283167-42283667 1.1e-11 52_[-5]_17 chr16:89142383-89142883 2e-11 47_[+5]_22 chr7:158084723-158085223 1.4e-10 59_[+5]_10 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCWCACCSRKGCACACCCWCACCCRSRCACA MEME-5 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CCWCACCSRKGCACACCCWCACCCRSRCACA width=31 seqs=10 chr12:132303862-13230436 ( 17) CCTCACCGGGGCACACCCTCACCCAGACACA 1 chr12:132305394-13230589 ( 5) CCTCACCCGGGCACACCCTCACCCGGGCACA 1 chr12:132305192-13230569 ( 63) CCTGACCTGGGCACACCCTCACCCGGGCACA 1 chr19:49659763-49660263 ( 20) TTACACACACACACACACACACACACACACA 1 chr2:241881425-241881925 ( 3) CCACACCCCTGTCCAGCCACACACACACACA 1 chr7:1011242-1011742 ( 57) AGACACCCTGACACACCCACACCCAGACACC 1 chr12:132304551-13230505 ( 64) CCTCGCCCGGGCACACCCTCGCCCGGGCACA 1 chr19:42283167-42283667 ( 53) TCACACAGATGTACAACCTCACACGCTCACG 1 chr16:89142383-89142883 ( 48) ACACCTGCAGGCACACCCACACCTGCAGACA 1 chr7:158084723-158085223 ( 60) CCACACGGATGCCCATACACTCCGACACCCA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCWCACCSRKGCACACCCWCACCCRSRCACA MEME-5 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 31 n= 42000 bayes= 12.2874 E= 2.4e-015 15 91 -997 15 -997 132 -168 -85 174 -997 -997 115 -997 149 -168 -997 215 -168 -168 -997 -997 149 -997 -85 15 91 -68 -997 -997 91 -9 -85 115 -168 32 -85 -997 -168 91 74 15 -997 132 -997 -997 132 -997 15 215 -68 -997 -997 -997 164 -997 -997 247 -997 -997 -997 -85 113 -168 -85 15 132 -997 -997 -997 164 -997 -997 147 -997 -997 147 -997 164 -997 -997 215 -997 -168 -85 -997 164 -997 -997 74 113 -997 -997 -997 132 -168 -85 147 -997 64 -997 -997 64 64 -997 174 -997 -9 -85 -997 149 -168 -997 232 -168 -997 -997 -997 164 -997 -997 215 -168 -168 -997 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCWCACCSRKGCACACCCWCACCCRSRCACA MEME-5 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 31 nsites= 10 E= 2.4e-015 0.200000 0.600000 0.000000 0.200000 0.000000 0.800000 0.100000 0.100000 0.600000 0.000000 0.000000 0.400000 0.000000 0.900000 0.100000 0.000000 0.800000 0.100000 0.100000 0.000000 0.000000 0.900000 0.000000 0.100000 0.200000 0.600000 0.200000 0.000000 0.000000 0.600000 0.300000 0.100000 0.400000 0.100000 0.400000 0.100000 0.000000 0.100000 0.600000 0.300000 0.200000 0.000000 0.800000 0.000000 0.000000 0.800000 0.000000 0.200000 0.800000 0.200000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.100000 0.700000 0.100000 0.100000 0.200000 0.800000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.500000 0.000000 0.000000 0.500000 0.000000 1.000000 0.000000 0.000000 0.800000 0.000000 0.100000 0.100000 0.000000 1.000000 0.000000 0.000000 0.300000 0.700000 0.000000 0.000000 0.000000 0.800000 0.100000 0.100000 0.500000 0.000000 0.500000 0.000000 0.000000 0.500000 0.500000 0.000000 0.600000 0.000000 0.300000 0.100000 0.000000 0.900000 0.100000 0.000000 0.900000 0.100000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.800000 0.100000 0.100000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCWCACCSRKGCACACCCWCACCCRSRCACA MEME-5 regular expression -------------------------------------------------------------------------------- [CAT]C[AT]CAC[CAG][CG][AG][GT][GA][CT][AC]CAC[CA]C[AT]CAC[CA]C[AG][CG][AG]CACA -------------------------------------------------------------------------------- Time 2209.30 secs. ******************************************************************************** ******************************************************************************** MOTIF TTTBATATTKTABGTACAGTAHAYAATAHAT MEME-6 width = 31 sites = 4 llr = 145 E-value = 3.7e-005 ******************************************************************************** -------------------------------------------------------------------------------- Motif TTTBATATTKTABGTACAGTAHAYAATAHAT MEME-6 Description -------------------------------------------------------------------------------- Simplified A ::::a383:::a::3a:a3:a3a:88:a38: pos.-specific C 33:3::::::3:33::a::::3:5::3:5:: probability G :::5:::::5::38::::8::::::::::3: matrix T 88a3:838a58:5:8::::a:5:5338:3:a bits 2.5 * * * * * * ** * * * 2.2 * * * * * * ** * * * 2.0 * * * * * * ** * * * 1.7 * ***** * **** ** * ** * * Relative 1.5 *** ***** ** **** ** * **** ** Entropy 1.2 *** ***** ** **** ** * **** ** (52.4 bits) 1.0 *** ******** ******* ****** ** 0.7 *** ******** *************** ** 0.5 *** *************************** 0.2 ******************************* 0.0 ------------------------------- Multilevel TTTGATATTGTATGTACAGTATACAATACAT consensus CC C ATA TC CCA A A TTTC AG sequence T G C T -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTBATATTKTABGTACAGTAHAYAATAHAT MEME-6 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ------------------------------- chrUn_KI270466v1:187-687 + 16 3.75e-20 ttttgggtcc tttgatattgtatgtacagtacataatacat attttgtgta chrUn_KI270467v1:2000-25 + 64 4.62e-19 tttcatgtac cttcatattttatgtacagtatacaatatat attttg chrUn_KI270467v1:2896-33 + 1 1.99e-18 . tctgataatttacgtacagtatataatacat aatttgggta chr6:82260147-82260647 - 66 1.59e-14 TGGA TTTTAATTTGCAGCAACAATAAACTTCAAGT AATGGGTCTT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTBATATTKTABGTACAGTAHAYAATAHAT MEME-6 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrUn_KI270466v1:187-687 3.7e-20 15_[+6]_54 chrUn_KI270467v1:2000-25 4.6e-19 63_[+6]_6 chrUn_KI270467v1:2896-33 2e-18 [+6]_69 chr6:82260147-82260647 1.6e-14 65_[-6]_4 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTBATATTKTABGTACAGTAHAYAATAHAT MEME-6 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TTTBATATTKTABGTACAGTAHAYAATAHAT width=31 seqs=4 chrUn_KI270466v1:187-687 ( 16) TTTGATATTGTATGTACAGTACATAATACAT 1 chrUn_KI270467v1:2000-25 ( 64) CTTCATATTTTATGTACAGTATACAATATAT 1 chrUn_KI270467v1:2896-33 ( 1) TCTGATAATTTACGTACAGTATATAATACAT 1 chr6:82260147-82260647 ( 66) TTTTAATTTGCAGCAACAATAAACTTCAAGT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTBATATTKTABGTACAGTAHAYAATAHAT MEME-6 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 31 n= 42000 bayes= 14.095 E= 3.7e-005 -865 -36 -865 206 -865 -36 -865 206 -865 -865 -865 247 -865 -36 64 47 247 -865 -865 -865 47 -865 -865 206 206 -865 -865 47 47 -865 -865 206 -865 -865 -865 247 -865 -865 64 147 -865 -36 -865 206 247 -865 -865 -865 -865 -36 -36 147 -865 -36 123 -865 47 -865 -865 206 247 -865 -865 -865 -865 164 -865 -865 247 -865 -865 -865 47 -865 123 -865 -865 -865 -865 247 247 -865 -865 -865 47 -36 -865 147 247 -865 -865 -865 -865 64 -865 147 206 -865 -865 47 206 -865 -865 47 -865 -36 -865 206 247 -865 -865 -865 47 64 -865 47 206 -865 -36 -865 -865 -865 -865 247 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTBATATTKTABGTACAGTAHAYAATAHAT MEME-6 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 31 nsites= 4 E= 3.7e-005 0.000000 0.250000 0.000000 0.750000 0.000000 0.250000 0.000000 0.750000 0.000000 0.000000 0.000000 1.000000 0.000000 0.250000 0.500000 0.250000 1.000000 0.000000 0.000000 0.000000 0.250000 0.000000 0.000000 0.750000 0.750000 0.000000 0.000000 0.250000 0.250000 0.000000 0.000000 0.750000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.500000 0.500000 0.000000 0.250000 0.000000 0.750000 1.000000 0.000000 0.000000 0.000000 0.000000 0.250000 0.250000 0.500000 0.000000 0.250000 0.750000 0.000000 0.250000 0.000000 0.000000 0.750000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.250000 0.000000 0.750000 0.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 0.250000 0.250000 0.000000 0.500000 1.000000 0.000000 0.000000 0.000000 0.000000 0.500000 0.000000 0.500000 0.750000 0.000000 0.000000 0.250000 0.750000 0.000000 0.000000 0.250000 0.000000 0.250000 0.000000 0.750000 1.000000 0.000000 0.000000 0.000000 0.250000 0.500000 0.000000 0.250000 0.750000 0.000000 0.250000 0.000000 0.000000 0.000000 0.000000 1.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTBATATTKTABGTACAGTAHAYAATAHAT MEME-6 regular expression -------------------------------------------------------------------------------- [TC][TC]T[GCT]A[TA][AT][TA]T[GT][TC]A[TCG][GC][TA]ACA[GA]TA[TAC]A[CT][AT][AT][TC]A[CAT][AG]T -------------------------------------------------------------------------------- Time 2595.72 secs. ******************************************************************************** ******************************************************************************** MOTIF GTKMTGTCAYGTGANRKSWGRTCAYRTGADG MEME-7 width = 31 sites = 6 llr = 174 E-value = 2.2e-003 ******************************************************************************** -------------------------------------------------------------------------------- Motif GTKMTGTCAYGTGANRKSWGRTCAYRTGADG MEME-7 Description -------------------------------------------------------------------------------- Simplified A 2::7:2::a:22:825::5:3::8:32273: pos.-specific C :::3:::a:3:::23::3::::8:5:::2:: probability G 827:28::::82a:2557:a7:2::7:823a matrix T :83:8:a::7:7::3:5:5::a:25:8::3: bits 2.5 * * * 2.2 * * * 2.0 * * * 1.7 * * *** ** * * * * * Relative 1.5 * * *** ** ** * * * * Entropy 1.2 ** ******** ** ** * * ** * (42.0 bits) 1.0 ************** ** *********** * 0.7 ************** ************** * 0.5 ************** **************** 0.2 ******************************* 0.0 ------------------------------- Multilevel GTGATGTCATGTGACAGGAGGTCACGTGAAG consensus TC C TGTCT A TA G sequence T -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GTKMTGTCAYGTGANRKSWGRTCAYRTGADG MEME-7 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ------------------------------- chr17:74514051-74514551 + 12 4.02e-18 catgtgacag gtgatgtcatgtgatgggtggtcatgtgatg ggtgatatgt chr17:74514440-74514940 + 6 5.84e-16 tgaca gggatgtcatgtgatgggtgatcatgtgatg ggtgctgtca chr10:50067626-50068126 + 47 6.68e-15 TCACGTGCGG GTTCTGTCACGTGACATCAGGTCACGTGAGG CCGGTCACGC chr10:45726933-45727433 + 52 6.68e-15 TCACGTGCGG GTTCTGTCACGTGACATCAGGTCACGTGAGG CCGGTCACGC chr1:3991993-3992493 + 52 1.11e-12 CAAAGGGGAG ATGATGTCATGGGAGAGGTGATGTCATGGAG AGGTGATGTC chr10:93208998-93209498 - 5 5.78e-12 ATCATAAGCA GTGAGATCATAAGCAGTGAGGTCATAAACAG TGAG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GTKMTGTCAYGTGANRKSWGRTCAYRTGADG MEME-7 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr17:74514051-74514551 4e-18 11_[+7]_58 chr17:74514440-74514940 5.8e-16 5_[+7]_64 chr10:50067626-50068126 6.7e-15 46_[+7]_23 chr10:45726933-45727433 6.7e-15 51_[+7]_18 chr1:3991993-3992493 1.1e-12 51_[+7]_18 chr10:93208998-93209498 5.8e-12 4_[-7]_65 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GTKMTGTCAYGTGANRKSWGRTCAYRTGADG MEME-7 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF GTKMTGTCAYGTGANRKSWGRTCAYRTGADG width=31 seqs=6 chr17:74514051-74514551 ( 12) GTGATGTCATGTGATGGGTGGTCATGTGATG 1 chr17:74514440-74514940 ( 6) GGGATGTCATGTGATGGGTGATCATGTGATG 1 chr10:50067626-50068126 ( 47) GTTCTGTCACGTGACATCAGGTCACGTGAGG 1 chr10:45726933-45727433 ( 52) GTTCTGTCACGTGACATCAGGTCACGTGAGG 1 chr1:3991993-3992493 ( 52) ATGATGTCATGGGAGAGGTGATGTCATGGAG 1 chr10:93208998-93209498 ( 5) GTGAGATCATAAGCAGTGAGGTCATAAACAG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GTKMTGTCAYGTGANRKSWGRTCAYRTGADG MEME-7 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 31 n= 42000 bayes= 13.2204 E= 2.2e-003 -11 -923 138 -923 -923 -923 -94 221 -923 -923 106 89 189 6 -923 -923 -923 -923 -94 221 -11 -923 138 -923 -923 -923 -923 247 -923 164 -923 -923 247 -923 -923 -923 -923 6 -923 189 -11 -923 138 -923 -11 -923 -94 189 -923 -923 164 -923 221 -94 -923 -923 -11 6 -94 89 147 -923 64 -923 -923 -923 64 147 -923 6 106 -923 147 -923 -923 147 -923 -923 164 -923 89 -923 106 -923 -923 -923 -923 247 -923 138 -94 -923 221 -923 -923 -11 -923 64 -923 147 89 -923 106 -923 -11 -923 -923 221 -11 -923 138 -923 189 -94 -94 -923 89 -923 6 89 -923 -923 164 -923 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GTKMTGTCAYGTGANRKSWGRTCAYRTGADG MEME-7 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 31 nsites= 6 E= 2.2e-003 0.166667 0.000000 0.833333 0.000000 0.000000 0.000000 0.166667 0.833333 0.000000 0.000000 0.666667 0.333333 0.666667 0.333333 0.000000 0.000000 0.000000 0.000000 0.166667 0.833333 0.166667 0.000000 0.833333 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.333333 0.000000 0.666667 0.166667 0.000000 0.833333 0.000000 0.166667 0.000000 0.166667 0.666667 0.000000 0.000000 1.000000 0.000000 0.833333 0.166667 0.000000 0.000000 0.166667 0.333333 0.166667 0.333333 0.500000 0.000000 0.500000 0.000000 0.000000 0.000000 0.500000 0.500000 0.000000 0.333333 0.666667 0.000000 0.500000 0.000000 0.000000 0.500000 0.000000 0.000000 1.000000 0.000000 0.333333 0.000000 0.666667 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.833333 0.166667 0.000000 0.833333 0.000000 0.000000 0.166667 0.000000 0.500000 0.000000 0.500000 0.333333 0.000000 0.666667 0.000000 0.166667 0.000000 0.000000 0.833333 0.166667 0.000000 0.833333 0.000000 0.666667 0.166667 0.166667 0.000000 0.333333 0.000000 0.333333 0.333333 0.000000 0.000000 1.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GTKMTGTCAYGTGANRKSWGRTCAYRTGADG MEME-7 regular expression -------------------------------------------------------------------------------- GT[GT][AC]TGTCA[TC]GTGA[CT][AG][GT][GC][AT]G[GA]TCA[CT][GA]TGA[AGT]G -------------------------------------------------------------------------------- Time 2979.08 secs. ******************************************************************************** ******************************************************************************** MOTIF RCCMCGCCC MEME-8 width = 9 sites = 93 llr = 799 E-value = 7.8e-001 ******************************************************************************** -------------------------------------------------------------------------------- Motif RCCMCGCCC MEME-8 Description -------------------------------------------------------------------------------- Simplified A 3::6:1::: pos.-specific C :aa4a:aa9 probability G 5::::9::: matrix T 2:::::::1 bits 2.5 2.2 2.0 1.7 * * ** Relative 1.5 ** * ** Entropy 1.2 ******** (12.4 bits) 1.0 ******** 0.7 ******** 0.5 ********* 0.2 ********* 0.0 --------- Multilevel GCCACGCCC consensus A C sequence T -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RCCMCGCCC MEME-8 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- --------- chrX:1452896-1453396 + 70 3.09e-05 TCTCCGTCAG GCCACGCCC AGGCCACACC chr19:49712290-49712790 - 24 3.09e-05 TCTCCCTCGG ACCACGCCC CTCCTCTGAC chr21:46635786-46636286 + 67 3.09e-05 gcccttcgcg gccacgccc acCTGCCTGG chr10:132752301-13275280 - 9 3.09e-05 CCTCCTCCAC GCCACGCCC CTCCACAC chr6:3118361-3118861 - 27 3.09e-05 CCGCCCCGAA GCCACGCCC TGCCGGGTGC chr17:17206306-17206806 + 17 3.09e-05 cacgtgccag gccacgCCC AGCACCCATG chr4:731298-731798 - 74 3.09e-05 ATGCCCGAGG ACCACGCCC ACCCACGACG chr4:731948-732448 - 14 3.09e-05 CAACCTGAGG ACCACGCCC ACTCACGAGG chr10:5889838-5890338 - 2 3.09e-05 CAGCTACCGG GCCACGCCC C chr19:39308384-39308884 + 1 3.09e-05 . ACCACGCCC CTTCGCTTTA chr19:6530686-6531186 - 60 3.09e-05 TCCGCCCGCG GCCACGCCC CTCCGCCCGC chr20:1118285-1118785 + 14 3.09e-05 GCTTTGAGGG GCCACGCCC CGCTCGCACT chr19:49363414-49363914 - 49 3.09e-05 ACACAGTCAG ACCACGCCC ACGTCAGTTG chr11:78188453-78188953 - 5 3.09e-05 ACCCCGGACC GCCACGCCC CTGG chr9:136342680-136343180 - 51 3.09e-05 GCCCCCATGG ACCACGCCC ACAACAGCAA chr20:62598640-62599140 - 2 3.09e-05 GCCCAGCCTA GCCACGCCC A chr2:241881425-241881925 - 86 3.09e-05 CGCGTG ACCACGCCC CTTAGTCTCC chr20:33709959-33710459 + 65 3.09e-05 TCTACAATGA ACCACGCCC TTTCCCCCAC chr19:43463548-43464048 - 71 3.09e-05 CCAACTCTGG GCCACGCCC CATCTGAGAC chr9:131373507-131374007 - 75 3.09e-05 GGCGTGAGCC ACCACGCCC GGCCTAGACG chr19:3557505-3558005 - 5 3.09e-05 GAGCCCTGCG GCCACGCCC CTCT chr19:6677836-6678336 - 16 3.09e-05 CCACGCCCAC ACCACGCCC CTTCCTGACC chr21:45287692-45288192 + 26 3.09e-05 ccgccccgga accacgccc cgccccCGTG chr16:11742710-11743210 + 58 3.09e-05 CCCCCAACGG GCCACGCCC TGCACCCTAC chr12:121839382-12183988 - 1 3.09e-05 GCCCACACTG ACCACGCCC chr4:6595859-6596359 - 60 3.09e-05 CCACCTGGAC ACCACGCCC ACCTGGACAG chr1:228173829-228174329 - 88 3.09e-05 GCGA GCCACGCCC ACAGCCACAC chr2:130727472-130727972 - 14 3.09e-05 ACAGCCAAAG ACCACGCCC AGAACAGCCC chr6:3258622-3259122 + 21 3.09e-05 CCCCGCCTCG ACCACGCCC CCAACCCAAG chr9:121074946-121075446 - 7 3.09e-05 GCCGGCCCAC ACCACGCCC GGTCCG chrX:15737907-15738407 - 79 4.21e-05 ACCTGGCAGA TCCACGCCC CACTACGTCC chr12:132159309-13215980 - 43 4.21e-05 TCCATGCCCC TCCACGCCC AGCCACACCC chr7:129825555-129826055 + 63 4.21e-05 GCCTCCCGGG TCCACGCCC GCGGGCCACT chr19:35154708-35155208 + 4 4.21e-05 CCA TCCACGCCC ACATCTCTCT chr19:1062951-1063451 + 64 9.70e-05 CACCAGTGTG GCCCCGCCC CATACTCATG chr8:144580377-144580877 + 47 9.70e-05 TCCTCACCTG GCCCCGCCC ACCACCGTCA chr15:65869107-65869607 - 89 9.70e-05 GGC GCCCCGCCC CTGAGCCCAA chr1:225999200-225999700 + 2 9.70e-05 C GCCCCGCCC CTCACGCTTC chr5:139273804-139274304 - 69 9.70e-05 GCCGAGGGGA ACCCCGCCC CGGGGCGGCT chr22:36387963-36388463 + 90 9.70e-05 CTAGGCGGGA GCCCCGCCC TC chr17:76353765-76354265 + 82 9.70e-05 TCACAGGTTC GCCCCGCCC CTGCTTTGAC chr1:7770941-7771441 + 40 9.70e-05 TCTCGCTCTG ACCCCGCCC TGGACGCACC chr22:21629834-21630334 + 58 9.70e-05 cgctgcccgg gccccgccc cgacgcacac chr19:45770478-45770978 + 63 9.70e-05 tcttccctgc gccccgccc ccgccccAAC chr16:68244996-68245496 - 25 9.70e-05 GGAGGTCGCC GCCCCGCCC TTGCCCAACC chrX:153971827-153972327 + 18 9.70e-05 GCGCAGGCGC GCCCCGCCC CACGGCCCCC chr19:40798677-40799177 + 13 9.70e-05 TCATTTGCGT GCCCCGCCC CGCCGACGCC chr19:5686881-5687381 + 67 9.70e-05 TCCGGCCTTG ACCCCGCCC TCGGACCCGC chr10:69123867-69124367 - 31 9.70e-05 CCAGCCTCCT GCCCCGCCC TGCTGGCCGC chr1:27383222-27383722 - 71 9.70e-05 TTTAGTCCAA GCCCCGCCC CAGACCCCCG chr2:241541182-241541682 - 32 9.70e-05 GCGCAGAGAA GCCCCGCCC CTCCCAGCGG chr14:24299545-24300045 + 49 9.70e-05 TGACACACCC ACCCCGCCC GGCTGGGGCG chr6:87322336-87322836 - 4 9.70e-05 GGCGGAGGGC GCCCCGCCC GGC chr6:5003558-5004058 + 3 9.70e-05 GG GCCCCGCCC CTCCGCGTAC chr22:50562672-50563172 + 67 9.70e-05 CGAGAGGGAT GCCCCGCCC TTTCCGTTAG chr12:6493032-6493532 + 72 9.70e-05 ACAGCCACGA GCCCCGCCC CCCGGGTTCC chr17:80147045-80147545 - 88 9.70e-05 GGGT GCCCCGCCC TCAACGAGAT chr16:68237477-68237977 - 62 9.70e-05 TCGCGGTTGC GCCCCGCCC CGCGAACAAA chr21:37267326-37267826 + 2 9.70e-05 C ACCCCGCCC CCTCTGGGCG chr1:114716560-114717060 + 7 9.70e-05 CTTCCG GCCCCGCCC GCTACGTAAT chr19:680693-681193 - 89 9.70e-05 AGA GCCCCGCCC CTTACATGAC chrX:135098719-135099219 + 49 9.70e-05 CGGCGTAGCG GCCCCGCCC ACTAGACCCG chr1:46719020-46719520 + 56 9.70e-05 GATTAGGGTG GCCCCGCCC CCAGGAGGGC chr19:10565853-10566353 + 54 9.70e-05 ACCGCTGCTA ACCCCGCCC CTGGCTTTTC chr19:55082406-55082906 - 2 9.70e-05 CTGCCTCCCA GCCCCGCCC C chr17:78140322-78140822 - 42 1.17e-04 TCCTTCCACG TCCCCGCCC GAGACCACGA chr15:68277530-68278030 + 52 1.17e-04 CTCGTCTTCC TCCCCGCCC AAGTTCCGGC chr20:31572735-31573235 + 45 1.17e-04 TGCCCCTGCC TCCCCGCCC TGCGTTTGGA chr12:56126100-56126600 - 77 1.17e-04 ACAGGGTGGG TCCCCGCCC ACTGACAATT chr19:17334704-17335204 + 85 1.17e-04 CTGCTGCTGG TCCCCGCCC GCACTGA chr6:158999965-159000465 - 27 1.17e-04 AGGAAGCTCT TCCCCGCCC GGGCACGTAA chr10:31032187-31032687 + 37 1.17e-04 CCCCGAGCAG TCCCCGCCC ATCTCTTGAC chr1:225428014-225428514 - 36 1.17e-04 CTCACCGGCC TCCCCGCCC CCAGGCAGGG chr18:74495928-74496428 - 86 1.17e-04 ACTCTC TCCCCGCCC CATTTCCGCC chr6:169840248-169840748 + 71 1.34e-04 cccatgccat accacaccc acaccatgct chr19:35558010-35558510 - 87 1.34e-04 CCCAG GCCACACCC ACATCAGCGG chr19:41262177-41262677 - 3 1.34e-04 TTTGCTGCCG GCCACACCC GC chr21:45500575-45501075 - 55 1.34e-04 AACACACCAA ACCACACCC CCACACTACA chr4:1566450-1566950 - 90 1.34e-04 GA ACCACACCC ACCTGTGACT chr19:1122965-1123465 - 79 1.34e-04 GCAGGCCGCG GCCACACCC CCGACCCGGC chr9:135189420-135189920 + 3 1.34e-04 at gccacaccc cccatcatgc chr14:22871491-22871991 - 3 1.34e-04 CAACGCACGG GCCACACCC AC chr16:3158548-3159048 - 38 1.34e-04 CCGGGTCCCG GCCACACCC CAACCTCAAG chr20:63350817-63351317 + 61 1.40e-04 catgcccacg tccacaccc acgcccactg chr12:131224380-13122488 - 59 1.40e-04 CACCCCTATC TCCACACCC ATGGCTTGGC chr16:11256335-11256835 + 49 1.40e-04 CCCAGCTGTC TCCACACCC GCCGGGGGCA chr4:4672969-4673469 + 35 1.58e-04 CCCCTTCAGG ACCACGCCT ACCCCCTCCC chr19:40465548-40466048 + 63 1.58e-04 GGCTCGAAGG GCCACGCCT CAGACTCTCC chr7:44200623-44201123 - 56 1.58e-04 GGGGCGGGAT GCCACGCCT CGCGTAAGCT chr19:7870607-7871107 - 1 1.58e-04 CTCTTCCATA GCCACGCCT chr17:48998065-48998565 - 86 1.95e-04 ACCCCT TCCACGCCT GGAAAGGCCT chr11:61581261-61581761 - 16 1.95e-04 GGAGTGGATC TCCACGCCT TTTGGATCGG chr21:36069765-36070265 - 23 3.03e-04 ACCCGTGGGT TACACGCCC GGCCGCTGAG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RCCMCGCCC MEME-8 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrX:1452896-1453396 3.1e-05 69_[+8]_22 chr19:49712290-49712790 3.1e-05 23_[-8]_68 chr21:46635786-46636286 3.1e-05 66_[+8]_25 chr10:132752301-13275280 3.1e-05 8_[-8]_83 chr6:3118361-3118861 3.1e-05 26_[-8]_65 chr17:17206306-17206806 3.1e-05 16_[+8]_75 chr4:731298-731798 3.1e-05 73_[-8]_18 chr4:731948-732448 3.1e-05 13_[-8]_78 chr10:5889838-5890338 3.1e-05 1_[-8]_90 chr19:39308384-39308884 3.1e-05 [+8]_91 chr19:6530686-6531186 3.1e-05 59_[-8]_32 chr20:1118285-1118785 3.1e-05 13_[+8]_78 chr19:49363414-49363914 3.1e-05 48_[-8]_43 chr11:78188453-78188953 3.1e-05 4_[-8]_87 chr9:136342680-136343180 3.1e-05 50_[-8]_41 chr20:62598640-62599140 3.1e-05 1_[-8]_90 chr2:241881425-241881925 3.1e-05 85_[-8]_6 chr20:33709959-33710459 3.1e-05 64_[+8]_27 chr19:43463548-43464048 3.1e-05 70_[-8]_21 chr9:131373507-131374007 3.1e-05 74_[-8]_17 chr19:3557505-3558005 3.1e-05 4_[-8]_87 chr19:6677836-6678336 3.1e-05 15_[-8]_76 chr21:45287692-45288192 3.1e-05 25_[+8]_66 chr16:11742710-11743210 3.1e-05 57_[+8]_34 chr12:121839382-12183988 3.1e-05 [-8]_91 chr4:6595859-6596359 3.1e-05 59_[-8]_32 chr1:228173829-228174329 3.1e-05 87_[-8]_4 chr2:130727472-130727972 3.1e-05 13_[-8]_78 chr6:3258622-3259122 3.1e-05 20_[+8]_71 chr9:121074946-121075446 3.1e-05 6_[-8]_85 chrX:15737907-15738407 4.2e-05 78_[-8]_13 chr12:132159309-13215980 4.2e-05 42_[-8]_49 chr7:129825555-129826055 4.2e-05 62_[+8]_29 chr19:35154708-35155208 4.2e-05 3_[+8]_88 chr19:1062951-1063451 9.7e-05 63_[+8]_28 chr8:144580377-144580877 9.7e-05 46_[+8]_45 chr15:65869107-65869607 9.7e-05 88_[-8]_3 chr1:225999200-225999700 9.7e-05 1_[+8]_90 chr5:139273804-139274304 9.7e-05 68_[-8]_23 chr22:36387963-36388463 9.7e-05 89_[+8]_2 chr17:76353765-76354265 9.7e-05 81_[+8]_10 chr1:7770941-7771441 9.7e-05 39_[+8]_52 chr22:21629834-21630334 9.7e-05 57_[+8]_34 chr19:45770478-45770978 9.7e-05 62_[+8]_29 chr16:68244996-68245496 9.7e-05 24_[-8]_67 chrX:153971827-153972327 9.7e-05 17_[+8]_74 chr19:40798677-40799177 9.7e-05 12_[+8]_79 chr19:5686881-5687381 9.7e-05 66_[+8]_25 chr10:69123867-69124367 9.7e-05 30_[-8]_61 chr1:27383222-27383722 9.7e-05 70_[-8]_21 chr2:241541182-241541682 9.7e-05 31_[-8]_60 chr14:24299545-24300045 9.7e-05 48_[+8]_43 chr6:87322336-87322836 9.7e-05 3_[-8]_88 chr6:5003558-5004058 9.7e-05 2_[+8]_89 chr22:50562672-50563172 9.7e-05 66_[+8]_25 chr12:6493032-6493532 9.7e-05 71_[+8]_20 chr17:80147045-80147545 9.7e-05 87_[-8]_4 chr16:68237477-68237977 9.7e-05 61_[-8]_30 chr21:37267326-37267826 9.7e-05 1_[+8]_90 chr1:114716560-114717060 9.7e-05 6_[+8]_85 chr19:680693-681193 9.7e-05 88_[-8]_3 chrX:135098719-135099219 9.7e-05 48_[+8]_43 chr1:46719020-46719520 9.7e-05 55_[+8]_36 chr19:10565853-10566353 9.7e-05 53_[+8]_38 chr19:55082406-55082906 9.7e-05 1_[-8]_90 chr17:78140322-78140822 0.00012 41_[-8]_50 chr15:68277530-68278030 0.00012 51_[+8]_40 chr20:31572735-31573235 0.00012 44_[+8]_47 chr12:56126100-56126600 0.00012 76_[-8]_15 chr19:17334704-17335204 0.00012 84_[+8]_7 chr6:158999965-159000465 0.00012 26_[-8]_65 chr10:31032187-31032687 0.00012 36_[+8]_55 chr1:225428014-225428514 0.00012 35_[-8]_56 chr18:74495928-74496428 0.00012 85_[-8]_6 chr6:169840248-169840748 0.00013 70_[+8]_21 chr19:35558010-35558510 0.00013 86_[-8]_5 chr19:41262177-41262677 0.00013 2_[-8]_89 chr21:45500575-45501075 0.00013 54_[-8]_37 chr4:1566450-1566950 0.00013 89_[-8]_2 chr19:1122965-1123465 0.00013 78_[-8]_13 chr9:135189420-135189920 0.00013 2_[+8]_89 chr14:22871491-22871991 0.00013 2_[-8]_89 chr16:3158548-3159048 0.00013 37_[-8]_54 chr20:63350817-63351317 0.00014 60_[+8]_31 chr12:131224380-13122488 0.00014 58_[-8]_33 chr16:11256335-11256835 0.00014 48_[+8]_43 chr4:4672969-4673469 0.00016 34_[+8]_57 chr19:40465548-40466048 0.00016 62_[+8]_29 chr7:44200623-44201123 0.00016 55_[-8]_36 chr19:7870607-7871107 0.00016 [-8]_91 chr17:48998065-48998565 0.0002 85_[-8]_6 chr11:61581261-61581761 0.0002 15_[-8]_76 chr21:36069765-36070265 0.0003 22_[-8]_69 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RCCMCGCCC MEME-8 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF RCCMCGCCC width=9 seqs=93 chrX:1452896-1453396 ( 70) GCCACGCCC 1 chr19:49712290-49712790 ( 24) ACCACGCCC 1 chr21:46635786-46636286 ( 67) GCCACGCCC 1 chr10:132752301-13275280 ( 9) GCCACGCCC 1 chr6:3118361-3118861 ( 27) GCCACGCCC 1 chr17:17206306-17206806 ( 17) GCCACGCCC 1 chr4:731298-731798 ( 74) ACCACGCCC 1 chr4:731948-732448 ( 14) ACCACGCCC 1 chr10:5889838-5890338 ( 2) GCCACGCCC 1 chr19:39308384-39308884 ( 1) ACCACGCCC 1 chr19:6530686-6531186 ( 60) GCCACGCCC 1 chr20:1118285-1118785 ( 14) GCCACGCCC 1 chr19:49363414-49363914 ( 49) ACCACGCCC 1 chr11:78188453-78188953 ( 5) GCCACGCCC 1 chr9:136342680-136343180 ( 51) ACCACGCCC 1 chr20:62598640-62599140 ( 2) GCCACGCCC 1 chr2:241881425-241881925 ( 86) ACCACGCCC 1 chr20:33709959-33710459 ( 65) ACCACGCCC 1 chr19:43463548-43464048 ( 71) GCCACGCCC 1 chr9:131373507-131374007 ( 75) ACCACGCCC 1 chr19:3557505-3558005 ( 5) GCCACGCCC 1 chr19:6677836-6678336 ( 16) ACCACGCCC 1 chr21:45287692-45288192 ( 26) ACCACGCCC 1 chr16:11742710-11743210 ( 58) GCCACGCCC 1 chr12:121839382-12183988 ( 1) ACCACGCCC 1 chr4:6595859-6596359 ( 60) ACCACGCCC 1 chr1:228173829-228174329 ( 88) GCCACGCCC 1 chr2:130727472-130727972 ( 14) ACCACGCCC 1 chr6:3258622-3259122 ( 21) ACCACGCCC 1 chr9:121074946-121075446 ( 7) ACCACGCCC 1 chrX:15737907-15738407 ( 79) TCCACGCCC 1 chr12:132159309-13215980 ( 43) TCCACGCCC 1 chr7:129825555-129826055 ( 63) TCCACGCCC 1 chr19:35154708-35155208 ( 4) TCCACGCCC 1 chr19:1062951-1063451 ( 64) GCCCCGCCC 1 chr8:144580377-144580877 ( 47) GCCCCGCCC 1 chr15:65869107-65869607 ( 89) GCCCCGCCC 1 chr1:225999200-225999700 ( 2) GCCCCGCCC 1 chr5:139273804-139274304 ( 69) ACCCCGCCC 1 chr22:36387963-36388463 ( 90) GCCCCGCCC 1 chr17:76353765-76354265 ( 82) GCCCCGCCC 1 chr1:7770941-7771441 ( 40) ACCCCGCCC 1 chr22:21629834-21630334 ( 58) GCCCCGCCC 1 chr19:45770478-45770978 ( 63) GCCCCGCCC 1 chr16:68244996-68245496 ( 25) GCCCCGCCC 1 chrX:153971827-153972327 ( 18) GCCCCGCCC 1 chr19:40798677-40799177 ( 13) GCCCCGCCC 1 chr19:5686881-5687381 ( 67) ACCCCGCCC 1 chr10:69123867-69124367 ( 31) GCCCCGCCC 1 chr1:27383222-27383722 ( 71) GCCCCGCCC 1 chr2:241541182-241541682 ( 32) GCCCCGCCC 1 chr14:24299545-24300045 ( 49) ACCCCGCCC 1 chr6:87322336-87322836 ( 4) GCCCCGCCC 1 chr6:5003558-5004058 ( 3) GCCCCGCCC 1 chr22:50562672-50563172 ( 67) GCCCCGCCC 1 chr12:6493032-6493532 ( 72) GCCCCGCCC 1 chr17:80147045-80147545 ( 88) GCCCCGCCC 1 chr16:68237477-68237977 ( 62) GCCCCGCCC 1 chr21:37267326-37267826 ( 2) ACCCCGCCC 1 chr1:114716560-114717060 ( 7) GCCCCGCCC 1 chr19:680693-681193 ( 89) GCCCCGCCC 1 chrX:135098719-135099219 ( 49) GCCCCGCCC 1 chr1:46719020-46719520 ( 56) GCCCCGCCC 1 chr19:10565853-10566353 ( 54) ACCCCGCCC 1 chr19:55082406-55082906 ( 2) GCCCCGCCC 1 chr17:78140322-78140822 ( 42) TCCCCGCCC 1 chr15:68277530-68278030 ( 52) TCCCCGCCC 1 chr20:31572735-31573235 ( 45) TCCCCGCCC 1 chr12:56126100-56126600 ( 77) TCCCCGCCC 1 chr19:17334704-17335204 ( 85) TCCCCGCCC 1 chr6:158999965-159000465 ( 27) TCCCCGCCC 1 chr10:31032187-31032687 ( 37) TCCCCGCCC 1 chr1:225428014-225428514 ( 36) TCCCCGCCC 1 chr18:74495928-74496428 ( 86) TCCCCGCCC 1 chr6:169840248-169840748 ( 71) ACCACACCC 1 chr19:35558010-35558510 ( 87) GCCACACCC 1 chr19:41262177-41262677 ( 3) GCCACACCC 1 chr21:45500575-45501075 ( 55) ACCACACCC 1 chr4:1566450-1566950 ( 90) ACCACACCC 1 chr19:1122965-1123465 ( 79) GCCACACCC 1 chr9:135189420-135189920 ( 3) GCCACACCC 1 chr14:22871491-22871991 ( 3) GCCACACCC 1 chr16:3158548-3159048 ( 38) GCCACACCC 1 chr20:63350817-63351317 ( 61) TCCACACCC 1 chr12:131224380-13122488 ( 59) TCCACACCC 1 chr16:11256335-11256835 ( 49) TCCACACCC 1 chr4:4672969-4673469 ( 35) ACCACGCCT 1 chr19:40465548-40466048 ( 63) GCCACGCCT 1 chr7:44200623-44201123 ( 56) GCCACGCCT 1 chr19:7870607-7871107 ( 1) GCCACGCCT 1 chr17:48998065-48998565 ( 86) TCCACGCCT 1 chr11:61581261-61581761 ( 16) TCCACGCCT 1 chr21:36069765-36070265 ( 23) TACACGCCC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RCCMCGCCC MEME-8 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 9 n= 55200 bayes= 10.2853 E= 7.8e-001 64 -1318 69 18 -406 163 -1318 -1318 -1318 164 -1318 -1318 166 43 -1318 -1318 -1318 164 -1318 -1318 -48 -1318 144 -1318 -1318 164 -1318 -1318 -1318 164 -1318 -1318 -1318 155 -1318 -148 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RCCMCGCCC MEME-8 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 9 nsites= 93 E= 7.8e-001 0.279570 0.000000 0.516129 0.204301 0.010753 0.989247 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.569892 0.430108 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.129032 0.000000 0.870968 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.935484 0.000000 0.064516 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RCCMCGCCC MEME-8 regular expression -------------------------------------------------------------------------------- [GAT]CC[AC]CGCCC -------------------------------------------------------------------------------- Time 3360.20 secs. ******************************************************************************** ******************************************************************************** MOTIF YGSCCWHAACMAAGATGGCGVC MEME-9 width = 22 sites = 10 llr = 180 E-value = 6.9e+000 ******************************************************************************** -------------------------------------------------------------------------------- Motif YGSCCWHAACMAAGATGGCGVC MEME-9 Description -------------------------------------------------------------------------------- Simplified A :212:63761499:9::1::41 pos.-specific C 3:689:4:185::21:::a:27 probability G 183:111:11:1:8::a9:94: matrix T 6::::3232:1:1::a:::1:2 bits 2.5 * 2.2 * 2.0 ** ** 1.7 ** *** * Relative 1.5 * ** *** * Entropy 1.2 * * ** ****** (26.0 bits) 1.0 * *** * ********* 0.7 ** *** ************* * 0.5 ****** *************** 0.2 ********************** 0.0 ---------------------- Multilevel TGCCCACAACCAAGATGGCGAC consensus CAGA TATT A C GT sequence T C -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif YGSCCWHAACMAAGATGGCGVC MEME-9 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ---------------------- chr10:102151941-10215244 + 50 8.98e-11 CGGTGGGCTC CGCCCTTAACCAAGATGGCGAT ACGCGTGGGA chr1:35557431-35557931 + 20 2.12e-10 ACTCGGGCAA TACCCACAAGCAAGATGGCGGC AACGGCGGCA chr5:173887812-173888312 + 58 2.39e-10 AGGAGTCCCT TGCCCACACAAAAGATGGCGAC CTGCTGCGCT chr10:123008550-12300905 - 29 1.28e-09 AAGGGAGTCG GAGACACAACAAAGATGGCGGC GGCGACTGTG chr17:76353765-76354265 - 5 1.54e-09 CCAGGCTCCC TGCCCTCATCCGAGATGGCGGC CTGA chr16:1971714-1972214 + 64 1.85e-09 CAGCCGCCAC TGCCCGAAGCAAAGATGGCGCC AAGTGCGCGG chr9:128656575-128657075 - 44 6.06e-09 GGAGGCGCTG CGACCAATTCAAACATGGCGCC GTCAGCCTCA chr19:38899579-38900079 - 12 6.55e-09 ATTTTCCGGG CGCCCTTTACCAACATGGCTGC TGACGCCACG chr21:29073490-29073990 + 78 1.11e-08 GCAACCTCTG TGGCCAGAACCAAGCTGACGAT C chr19:41859714-41860214 - 9 4.36e-08 GGAACAGTGG TGGAGAATACTATGATGGCGAA AGTACGGG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif YGSCCWHAACMAAGATGGCGVC MEME-9 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr10:102151941-10215244 9e-11 49_[+9]_29 chr1:35557431-35557931 2.1e-10 19_[+9]_59 chr5:173887812-173888312 2.4e-10 57_[+9]_21 chr10:123008550-12300905 1.3e-09 28_[-9]_50 chr17:76353765-76354265 1.5e-09 4_[-9]_74 chr16:1971714-1972214 1.9e-09 63_[+9]_15 chr9:128656575-128657075 6.1e-09 43_[-9]_35 chr19:38899579-38900079 6.5e-09 11_[-9]_67 chr21:29073490-29073990 1.1e-08 77_[+9]_1 chr19:41859714-41860214 4.4e-08 8_[-9]_70 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif YGSCCWHAACMAAGATGGCGVC MEME-9 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF YGSCCWHAACMAAGATGGCGVC width=22 seqs=10 chr10:102151941-10215244 ( 50) CGCCCTTAACCAAGATGGCGAT 1 chr1:35557431-35557931 ( 20) TACCCACAAGCAAGATGGCGGC 1 chr5:173887812-173888312 ( 58) TGCCCACACAAAAGATGGCGAC 1 chr10:123008550-12300905 ( 29) GAGACACAACAAAGATGGCGGC 1 chr17:76353765-76354265 ( 5) TGCCCTCATCCGAGATGGCGGC 1 chr16:1971714-1972214 ( 64) TGCCCGAAGCAAAGATGGCGCC 1 chr9:128656575-128657075 ( 44) CGACCAATTCAAACATGGCGCC 1 chr19:38899579-38900079 ( 12) CGCCCTTTACCAACATGGCTGC 1 chr21:29073490-29073990 ( 78) TGGCCAGAACCAAGCTGACGAT 1 chr19:41859714-41860214 ( 9) TGGAGAATACTATGATGGCGAA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif YGSCCWHAACMAAGATGGCGVC MEME-9 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 22 n= 47400 bayes= 12.462 E= 6.9e+000 -997 -9 -168 174 15 -997 132 -997 -85 91 -9 -997 15 132 -997 -997 -997 149 -168 -997 174 -997 -168 74 74 32 -168 15 196 -997 -997 74 174 -168 -168 15 -85 132 -168 -997 115 64 -997 -85 232 -997 -168 -997 232 -997 -997 -85 -997 -68 132 -997 232 -168 -997 -997 -997 -997 -997 247 -997 -997 164 -997 -85 -997 149 -997 -997 164 -997 -997 -997 -997 149 -85 115 -68 32 -997 -85 113 -997 15 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif YGSCCWHAACMAAGATGGCGVC MEME-9 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 22 nsites= 10 E= 6.9e+000 0.000000 0.300000 0.100000 0.600000 0.200000 0.000000 0.800000 0.000000 0.100000 0.600000 0.300000 0.000000 0.200000 0.800000 0.000000 0.000000 0.000000 0.900000 0.100000 0.000000 0.600000 0.000000 0.100000 0.300000 0.300000 0.400000 0.100000 0.200000 0.700000 0.000000 0.000000 0.300000 0.600000 0.100000 0.100000 0.200000 0.100000 0.800000 0.100000 0.000000 0.400000 0.500000 0.000000 0.100000 0.900000 0.000000 0.100000 0.000000 0.900000 0.000000 0.000000 0.100000 0.000000 0.200000 0.800000 0.000000 0.900000 0.100000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.100000 0.000000 0.900000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.900000 0.100000 0.400000 0.200000 0.400000 0.000000 0.100000 0.700000 0.000000 0.200000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif YGSCCWHAACMAAGATGGCGVC MEME-9 regular expression -------------------------------------------------------------------------------- [TC][GA][CG][CA]C[AT][CAT][AT][AT]C[CA]AA[GC]ATGGCG[AGC][CT] -------------------------------------------------------------------------------- Time 3736.55 secs. ******************************************************************************** ******************************************************************************** MOTIF TCATGTKWTRRRTVATGTKAT MEME-10 width = 21 sites = 7 llr = 136 E-value = 5.1e+002 ******************************************************************************** -------------------------------------------------------------------------------- Motif TCATGTKWTRRRTVATGTKAT MEME-10 Description -------------------------------------------------------------------------------- Simplified A 1:7:3113:663139:1::91 pos.-specific C :a11:::1:::1:3:11:1:: probability G ::::7161:446:4::7:41: matrix T 9:19:734a:::9:19:a4:9 bits 2.5 * * 2.2 * * 2.0 * * * * * * 1.7 ** * * * ** * ** Relative 1.5 ** * * * ** * ** Entropy 1.2 **** * *** * ** * ** (28.1 bits) 1.0 ****** *** * ** * ** 0.7 ******* *** * ** * ** 0.5 ************* ******* 0.2 ********************* 0.0 --------------------- Multilevel TCATGTGTTAAGTGATGTGAT consensus A TA GGA A T sequence C -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCATGTKWTRRRTVATGTKAT MEME-10 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- --------------------- chr17:74514440-74514940 + 76 8.97e-12 atgggtgatg tcatgtgatgggtgatgtgat gggc chr17:74514051-74514551 + 78 1.31e-11 gtgggggtgg tcatgtgataggtgatgtcat gt chr21:29217711-29218211 + 68 2.64e-10 ACAAAATTCC TCCTATGTTGAATGTTGTtat tctcccctca chr17:7242761-7243261 + 63 6.49e-10 ACACTGCGGG ACTTGAGTTAAATCATGTGAT CTCAAAGAGG chr4:72112451-72112951 + 66 9.10e-10 TCACAATGAG TCATGTTGTGAGTCATATTGT GACATCTGTG chr12:53625970-53626470 + 78 5.24e-09 TCCCGTCAGA TCATGGACTAGCTAATGTTAA AA chr15:72231140-72231640 + 79 7.64e-09 AGATTCAGAG TCACATTTTAAGAAACCTGAT G -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCATGTKWTRRRTVATGTKAT MEME-10 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr17:74514440-74514940 9e-12 75_[+10]_4 chr17:74514051-74514551 1.3e-11 77_[+10]_2 chr21:29217711-29218211 2.6e-10 67_[+10]_12 chr17:7242761-7243261 6.5e-10 62_[+10]_17 chr4:72112451-72112951 9.1e-10 65_[+10]_14 chr12:53625970-53626470 5.2e-09 77_[+10]_2 chr15:72231140-72231640 7.6e-09 78_[+10]_1 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCATGTKWTRRRTVATGTKAT MEME-10 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TCATGTKWTRRRTVATGTKAT width=21 seqs=7 chr17:74514440-74514940 ( 76) TCATGTGATGGGTGATGTGAT 1 chr17:74514051-74514551 ( 78) TCATGTGATAGGTGATGTCAT 1 chr21:29217711-29218211 ( 68) TCCTATGTTGAATGTTGTTAT 1 chr17:7242761-7243261 ( 63) ACTTGAGTTAAATCATGTGAT 1 chr4:72112451-72112951 ( 66) TCATGTTGTGAGTCATATTGT 1 chr12:53625970-53626470 ( 78) TCATGGACTAGCTAATGTTAA 1 chr15:72231140-72231640 ( 79) TCACATTTTAAGAAACCTGAT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCATGTKWTRRRTVATGTKAT MEME-10 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 21 n= 48000 bayes= 13.9657 E= 5.1e+002 -33 -945 -945 225 -945 164 -945 -945 199 -116 -945 -33 -945 -116 -945 225 67 -945 116 -945 -33 -945 -116 199 -33 -945 84 67 67 -116 -116 125 -945 -945 -945 247 167 -945 42 -945 167 -945 42 -945 67 -116 84 -945 -33 -945 -945 225 67 -16 42 -945 225 -945 -945 -33 -945 -116 -945 225 -33 -116 116 -945 -945 -945 -945 247 -945 -116 42 125 225 -945 -116 -945 -33 -945 -945 225 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCATGTKWTRRRTVATGTKAT MEME-10 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 21 nsites= 7 E= 5.1e+002 0.142857 0.000000 0.000000 0.857143 0.000000 1.000000 0.000000 0.000000 0.714286 0.142857 0.000000 0.142857 0.000000 0.142857 0.000000 0.857143 0.285714 0.000000 0.714286 0.000000 0.142857 0.000000 0.142857 0.714286 0.142857 0.000000 0.571429 0.285714 0.285714 0.142857 0.142857 0.428571 0.000000 0.000000 0.000000 1.000000 0.571429 0.000000 0.428571 0.000000 0.571429 0.000000 0.428571 0.000000 0.285714 0.142857 0.571429 0.000000 0.142857 0.000000 0.000000 0.857143 0.285714 0.285714 0.428571 0.000000 0.857143 0.000000 0.000000 0.142857 0.000000 0.142857 0.000000 0.857143 0.142857 0.142857 0.714286 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.142857 0.428571 0.428571 0.857143 0.000000 0.142857 0.000000 0.142857 0.000000 0.000000 0.857143 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCATGTKWTRRRTVATGTKAT MEME-10 regular expression -------------------------------------------------------------------------------- TCAT[GA]T[GT][TA]T[AG][AG][GA]T[GAC]ATGT[GT]AT -------------------------------------------------------------------------------- Time 4101.47 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr22:39520144-39520644 7.96e-03 100 chr12:56041719-56042219 9.95e-04 31_[-4(2.64e-08)]_26 chr19:55082406-55082906 2.11e-02 1_[-8(9.70e-05)]_90 chr17:28726422-28726922 1.01e-01 [+1(8.55e-06)]_78 chr16:11256335-11256835 1.52e-03 13_[+1(2.47e-05)]_65 chr19:1082304-1082804 4.13e-01 100 chr1:75724558-75725058 9.12e-02 15_[+9(1.87e-05)]_63 chr5:1950705-1951205 1.13e-01 100 chr15:89893821-89894321 9.85e-01 100 chr19:10565853-10566353 2.99e-01 3_[+1(7.83e-05)]_20_[+1(4.82e-05)]_\ 33 chr9:15422495-15422995 3.11e-03 44_[+2(5.82e-09)]_40 chr16:3158548-3159048 1.45e-03 32_[-1(3.72e-05)]_[-1(2.15e-05)]_\ [-1(1.38e-05)]_2 chr6:3251394-3251894 7.03e-01 100 chr3:170222090-170222590 2.93e-02 1_[-3(3.05e-06)]_83 chr5:137754343-137754843 2.06e-01 62_[-3(3.47e-05)]_22 chr5:180810315-180810815 2.21e-02 20_[-1(6.12e-06)]_41_[-3(2.55e-05)]_\ 1 chr18:74495928-74496428 1.08e-02 100 chr19:56121186-56121686 7.18e-01 100 chr5:14156534-14157034 6.65e-04 55_[-4(1.67e-07)]_2 chr1:205122031-205122531 2.19e-01 100 chr12:12724541-12725041 1.44e-05 76_[+3(2.55e-05)]_8 chr9:121074946-121075446 2.41e-03 6_[-8(3.09e-05)]_59_[+3(5.03e-05)]_\ 10 chr1:25819721-25820221 3.04e-03 59_[-1(3.26e-05)]_19 chr15:72783550-72784050 1.16e-01 61_[-1(2.84e-05)]_17 chr1:46719020-46719520 5.32e-01 55_[+8(9.70e-05)]_36 chr21:36069765-36070265 8.56e-01 100 chr19:4723791-4724291 2.03e-01 100 chr17:59209720-59210220 3.35e-03 2_[+3(1.10e-05)]_18_[-4(2.86e-05)]_\ 21 chr6:159726711-159727211 7.53e-01 100 chr1:156705880-156706380 3.28e-01 100 chr14:22871491-22871991 3.44e-02 24_[-1(4.82e-05)]_54 chr5:132963497-132963997 1.09e-02 20_[-1(3.60e-06)]_58 chr6:3258622-3259122 1.94e-03 12_[+1(1.36e-06)]_17_[+1(2.80e-07)]_\ 27 chr2:201451306-201451806 7.79e-01 100 chr19:36115404-36115904 2.76e-03 77_[-1(1.18e-05)]_1 chr6:143450485-143450985 2.14e-01 100 chr19:17215163-17215663 4.31e-02 10_[+2(5.94e-05)]_74 chr11:125625796-12562629 5.80e-02 100 chr17:51153278-51153778 4.17e-01 100 chr17:63842682-63843182 8.28e-01 100 chr17:48025112-48025612 2.54e-02 20_[-1(5.15e-06)]_58 chr21:33491442-33491942 1.86e-01 100 chr19:55259034-55259534 3.94e-01 100 chr17:42388512-42389012 3.39e-01 67_[+3(2.16e-05)]_17 chr19:58408243-58408743 7.06e-02 56_[+1(4.82e-05)]_22 chr3:11846637-11847137 4.52e-01 45_[+1(4.24e-05)]_33 chr20:34676965-34677465 6.49e-03 50_[-2(5.68e-08)]_34 chr1:151070373-151070873 6.97e-01 100 chr22:35840358-35840858 1.69e-06 66_[-5(1.83e-13)]_3 chr22:19432102-19432602 2.31e-02 23_[-1(8.55e-06)]_55 chrX:135098719-135099219 3.34e-02 48_[+8(9.70e-05)]_15_[+1(2.47e-06)]_\ 6 chr10:119725664-11972616 1.56e-02 11_[+3(8.16e-05)]_11_[+3(2.75e-06)]_\ 46 chr1:225428014-225428514 1.43e-01 11_[+1(6.96e-05)]_67 chr19:49118665-49119165 8.41e-01 100 chr16:2682227-2682727 1.70e-01 44_[+9(8.21e-05)]_34 chr1:244450952-244451452 2.62e-02 28_[-1(1.60e-05)]_50 chr2:130727472-130727972 1.22e-02 13_[-8(3.09e-05)]_8_[-1(1.67e-06)]_\ 5_[-8(3.09e-05)]_34 chr17:16535614-16536114 2.21e-02 62_[-3(2.61e-07)]_22 chr1:99849897-99850397 6.92e-01 100 chr3:48446407-48446907 3.42e-02 30_[-1(7.83e-05)]_48 chr12:50167277-50167777 5.38e-02 53_[+8(4.21e-05)]_38 chr19:1490558-1491058 8.34e-02 47_[+8(9.70e-05)]_44 chr1:206612245-206612745 1.00e+00 100 chr16:30634166-30634666 9.54e-01 100 chr4:170027156-170027656 5.39e-01 100 chr15:64387534-64388034 1.55e-01 100 chr11:61581261-61581761 2.18e-01 100 chr20:25407420-25407920 5.06e-01 100 chr5:138464595-138465095 5.32e-01 100 chr9:37800521-37801021 8.80e-01 100 chr17:47650473-47650973 2.92e-03 47_[+3(1.20e-09)]_37 chr5:59303274-59303774 1.69e-05 18_[+4(3.18e-10)]_39 chr14:23285904-23286404 1.52e-01 10_[-1(5.46e-05)]_68 chr19:36214330-36214830 6.76e-02 54_[+1(2.15e-05)]_24 chr18:62522585-62523085 1.93e-01 100 chr19:39970726-39971226 2.04e-01 100 chr7:99465980-99466480 4.34e-01 100 chr19:680693-681193 3.60e-02 28_[-1(8.79e-05)]_38_[-8(9.70e-05)]_\ 3 chr1:114716560-114717060 2.06e-01 6_[+8(9.70e-05)]_26_[+1(6.96e-05)]_\ 37 chr16:1971714-1972214 2.33e-03 63_[+9(1.85e-09)]_15 chr12:31749184-31749684 4.56e-03 51_[-4(2.89e-08)]_6 chr21:37267326-37267826 3.74e-02 1_[+8(9.70e-05)]_22_[+1(6.12e-06)]_\ 46 chr4:72112451-72112951 9.89e-10 19_[+4(8.23e-09)]_3_[+10(9.10e-10)]_\ 14 chr3:88058893-88059393 4.72e-04 66_[-1(5.15e-06)]_12 chr19:16111386-16111886 1.46e-03 8_[+1(1.36e-06)]_70 chr5:138752975-138753475 9.29e-01 100 chr7:100436234-100436734 2.34e-02 18_[+1(2.15e-05)]_60 chr6:79078069-79078569 5.04e-01 100 chr21:34889748-34890248 6.01e-01 100 chr19:36572858-36573358 1.69e-01 100 chr10:101569970-10157047 8.50e-03 7_[+3(8.73e-05)]_35_[+1(1.01e-05)]_\ 20 chr6:24720810-24721310 5.30e-03 21_[+4(3.80e-05)]_36 chr19:38849880-38850380 5.08e-01 100 chr14:30621986-30622486 2.14e-02 47_[+1(1.86e-05)]_31 chr4:789753-790253 7.16e-01 68_[-8(9.70e-05)]_23 chr1:1511682-1512182 9.87e-01 100 chr7:103074658-103075158 3.18e-03 3_[-8(9.70e-05)]_1_[-8(3.09e-05)]_\ 57_[+3(1.10e-05)]_5 chr2:26033906-26034406 2.84e-01 100 chr20:50165934-50166434 1.40e-01 100 chr1:35031570-35032070 1.49e-02 4_[+1(2.15e-05)]_74 chr2:86440843-86441343 6.82e-02 100 chr11:65095895-65096395 2.54e-01 100 chr19:40831798-40832298 1.80e-02 100 chr5:116574672-116575172 2.18e-01 100 chr6:87155166-87155666 1.68e-04 19_[+1(7.16e-07)]_36_[+1(7.83e-05)]_\ 1 chr10:1056411-1056911 6.95e-01 100 chr5:181246155-181246655 4.51e-01 100 chr6:49463033-49463533 5.15e-01 100 chr19:40623896-40624396 9.24e-04 14_[+5(2.43e-05)]_28_[+1(1.60e-05)]_\ 5 chr14:64387697-64388197 7.11e-01 100 chr6:26171753-26172253 4.19e-01 100 chr16:68237477-68237977 4.18e-03 61_[-8(9.70e-05)]_30 chr17:49677837-49678337 3.05e-05 15_[+5(4.65e-12)]_54 chr1:153566457-153566957 1.19e-01 60_[+5(3.40e-05)]_9 chr1:27321910-27322410 3.13e-01 10_[-2(6.38e-05)]_74 chr1:228173829-228174329 7.72e-02 87_[-8(3.09e-05)]_4 chr2:48314203-48314703 1.44e-01 14_[+8(9.70e-05)]_77 chr15:74099994-74100494 3.97e-01 100 chr14:91510382-91510882 2.58e-01 23_[-8(4.21e-05)]_68 chr19:48619079-48619579 9.08e-01 100 chr17:38559295-38559795 6.28e-03 47_[-1(3.26e-05)]_31 chr13:21663157-21663657 2.12e-01 100 chr17:27353558-27354058 1.19e-01 100 chr7:2314404-2314904 2.66e-02 2_[+8(3.09e-05)]_89 chrX:153928177-153928677 4.03e-01 100 chr17:80147045-80147545 6.20e-02 87_[-8(9.70e-05)]_4 chr22:20496057-20496557 8.84e-04 16_[-3(9.05e-06)]_10_[-3(4.05e-05)]_\ 13_[-3(1.55e-05)]_13 chr1:50960048-50960548 7.04e-01 100 chr1:244970534-244971034 1.25e-02 19_[-3(1.30e-05)]_10_[-3(2.61e-07)]_\ 39 chr20:3811632-3812132 4.47e-01 60_[-1(6.96e-05)]_18 chr5:179818847-179819347 7.21e-01 100 chr19:7870607-7871107 1.84e-03 28_[-1(5.15e-06)]_50 chr7:100874780-100875280 6.04e-03 42_[-3(1.69e-05)]_6_[+1(2.47e-05)]_\ 14 chr12:6493032-6493532 1.37e-01 36_[+1(3.26e-05)]_13_[+8(9.70e-05)]_\ 20 chr12:122526953-12252745 2.35e-03 21_[+6(3.77e-05)]_48 chr5:124735023-124735523 2.62e-03 100 chr12:6765973-6766473 9.17e-04 [-3(9.93e-05)]_3_[-3(1.25e-06)]_8_\ [-3(3.47e-05)]_6_[-3(7.58e-06)]_1_[-3(2.35e-05)]_2 chr10:132279913-13228041 1.16e-01 100 chr22:50562672-50563172 5.99e-01 66_[+8(9.70e-05)]_25 chr17:18039195-18039695 5.84e-07 7_[-5(5.46e-09)]_2_[-5(1.01e-09)]_\ 29 chr17:51121661-51122161 4.87e-03 3_[-1(5.46e-05)]_[-10(2.91e-05)]_54 chr12:131224380-13122488 8.73e-04 14_[+3(9.96e-06)]_37_[-1(4.31e-06)]_\ 11 chr15:90994507-90995007 9.78e-02 21_[-8(3.09e-05)]_70 chr10:17228328-17228828 1.61e-02 23_[-3(2.99e-05)]_61 chr10:93496245-93496745 1.38e-01 100 chr20:37095788-37096288 1.89e-01 43_[+2(7.05e-05)]_41 chr15:90954826-90955326 1.75e-01 100 chr19:39445316-39445816 2.71e-02 10_[+10(1.05e-05)]_69 chr1:149636390-149636890 5.92e-01 100 chr1:227787848-227788348 1.12e-04 21_[-1(5.71e-07)]_57 chr17:27293912-27294412 4.36e-01 100 chr19:40920926-40921426 1.77e-02 8_[+4(1.21e-07)]_49 chr17:48908108-48908608 4.53e-02 35_[-1(2.15e-05)]_43 chr19:35879732-35880232 2.50e-01 [-1(2.47e-05)]_78 chr19:37655761-37656261 8.90e-01 100 chr19:34254210-34254710 7.25e-01 100 chr19:38899579-38900079 1.32e-04 11_[-9(6.55e-09)]_67 chr1:37989839-37990339 8.66e-01 100 chr15:75347446-75347946 9.12e-02 20_[+7(8.95e-05)]_49 chr3:194134780-194135280 5.64e-04 58_[+5(1.91e-09)]_11 chr17:50866455-50866955 3.43e-03 49_[-1(1.18e-05)]_29 chr4:6595859-6596359 5.89e-04 59_[-8(3.09e-05)]_8_[-8(3.09e-05)]_\ 15 chr5:124740978-124741478 1.48e-06 9_[-6(8.55e-05)]_[-4(9.02e-09)]_17 chr10:31032187-31032687 6.19e-03 6_[+1(2.15e-05)]_[+1(2.15e-05)]_6_\ [+1(3.72e-05)]_22 chr17:18087615-18088115 5.21e-01 66_[-2(2.08e-05)]_18 chr6:5003558-5004058 1.55e-01 2_[+8(9.70e-05)]_10_[+1(5.46e-05)]_\ 57 chr17:41689135-41689635 5.41e-02 100 chr6:87322336-87322836 1.78e-03 3_[-8(9.70e-05)]_40_[-8(9.70e-05)]_\ 39 chr19:49659763-49660263 1.12e-14 19_[+5(5.60e-13)]_[+1(1.18e-05)]_28 chr3:181328956-181329456 7.15e-06 21_[+4(3.54e-09)]_36 chr22:31749770-31750270 4.11e-01 100 chr9:127771247-127771747 1.26e-01 15_[-3(4.37e-05)]_69 chr17:48998065-48998565 1.39e-01 1_[+1(7.25e-06)]_77 chr1:38859666-38860166 1.97e-02 44_[+3(9.96e-06)]_40 chr14:24299545-24300045 8.71e-02 16_[-1(1.01e-05)]_10_[+8(9.70e-05)]_\ 43 chr1:827248-827748 4.09e-01 100 chr12:53625970-53626470 2.98e-03 77_[+10(5.24e-09)]_2 chr17:45148268-45148768 8.46e-04 53_[+3(2.55e-05)]_12_[+3(3.94e-07)]_\ 3 chr20:33810909-33811409 1.68e-01 100 chr1:32817214-32817714 1.36e-01 36_[-1(9.84e-05)]_12_[-1(8.55e-06)]_\ 8 chr2:241541182-241541682 3.75e-02 13_[-8(3.09e-05)]_9_[-8(9.70e-05)]_\ 60 chr20:38446386-38446886 7.99e-01 100 chr1:28581641-28582141 1.59e-02 100 chr5:178153774-178154274 6.32e-02 100 chr1:27383222-27383722 6.82e-03 7_[-1(2.84e-05)]_36_[-1(7.83e-05)]_\ 13 chr22:42965009-42965509 2.14e-02 82_[+3(6.69e-05)]_2 chr12:48716820-48717320 6.16e-01 100 chr19:39125758-39126258 5.28e-03 31_[-1(4.53e-07)]_47 chr1:36088622-36089122 8.66e-01 100 chr7:44200623-44201123 3.16e-01 100 chr10:123008550-12300905 3.08e-04 28_[-9(1.28e-09)]_50 chr19:55599898-55600398 1.30e-01 58_[-8(3.09e-05)]_33 chr17:64506232-64506732 6.57e-03 100 chr1:1308031-1308531 2.07e-01 69_[-5(3.79e-05)] chr19:4575287-4575787 2.72e-02 53_[-2(6.91e-06)]_31 chr6:158999965-159000465 7.70e-03 3_[-9(9.15e-05)]_75 chr9:135188716-135189216 1.11e-01 100 chr19:51367471-51367971 4.34e-03 38_[-3(5.62e-06)]_9_[+1(3.72e-05)]_\ 15 chr19:35248561-35249061 6.24e-01 100 chr19:42889589-42890089 2.70e-06 48_[-4(1.21e-10)]_9 chr1:193059259-193059759 1.87e-01 100 chr5:173887812-173888312 4.93e-08 57_[+9(2.39e-10)]_21 chr1:159924397-159924897 9.37e-03 6_[+1(1.01e-05)]_72 chr10:69123867-69124367 2.60e-03 30_[-8(9.70e-05)]_31_[+3(8.58e-07)]_\ 14 chr10:75379145-75379645 6.34e-06 29_[+4(1.55e-08)]_28 chr7:105012476-105012976 5.98e-02 31_[+1(8.79e-05)]_47 chr17:42154845-42155345 3.08e-01 100 chr14:102139372-10213987 9.71e-01 100 chr10:93702422-93702922 1.30e-01 82_[+3(4.70e-05)]_2 chr3:9749892-9750392 2.97e-01 100 chr1:81126904-81127404 8.20e-02 100 chr7:139359472-139359972 7.12e-01 100 chr1:229508141-229508641 1.24e-02 14_[+9(9.91e-05)]_22_[-1(9.84e-05)]_\ 20 chr19:40603616-40604116 4.48e-01 100 chr22:41448096-41448596 1.56e-01 100 chr17:46192455-46192955 1.26e-03 75_[+3(6.80e-07)]_9 chr15:75625564-75626064 4.69e-02 36_[-3(6.90e-06)]_48 chr19:57240392-57240892 3.08e-02 100 chr14:99821631-99822131 3.86e-04 2_[+4(2.92e-09)]_55 chr12:132305394-13230589 5.00e-09 4_[+5(4.84e-15)]_1_[+5(4.75e-10)]_1_\ [+5(1.37e-09)]_1 chrX:53225072-53225572 6.99e-04 54_[+4(3.15e-08)]_3 chr1:205211456-205211956 4.21e-01 100 chr12:121839382-12183988 2.42e-02 [-8(3.09e-05)]_1_[-1(1.36e-06)]_68 chr16:30021381-30021881 9.60e-02 55_[+3(1.10e-05)]_29 chr19:33795463-33795963 1.11e-03 14_[+3(2.48e-06)]_2_[+3(2.99e-05)]_\ 4_[+3(2.55e-05)]_32 chr1:53220247-53220747 1.36e-01 100 chr1:159916170-159916670 4.93e-04 2_[-10(4.04e-05)]_21_[+4(5.41e-06)]_\ 13 chr19:40716784-40717284 6.73e-02 71_[+1(2.04e-06)]_7 chr17:2401394-2401894 4.39e-01 53_[-3(4.21e-06)]_31 chr19:42283167-42283667 3.20e-06 52_[-5(1.08e-11)]_17 chr16:11742710-11743210 4.07e-02 33_[+1(3.60e-06)]_2_[+8(3.09e-05)]_\ 34 chr21:39312318-39312818 3.39e-02 19_[+1(9.84e-05)]_10_[+1(7.25e-06)]_\ 27 chr16:29806528-29807028 4.14e-01 71_[+1(7.83e-05)]_7 chr19:35154708-35155208 2.20e-03 3_[+8(4.21e-05)]_3_[-3(1.97e-06)]_\ 69 chr12:124917062-12491756 4.59e-02 81_[+3(1.55e-05)]_3 chr19:38506883-38507383 2.07e-01 25_[-1(6.17e-05)]_9_[-1(2.84e-05)]_\ 22 chr19:40715536-40716036 2.50e-02 100 chr21:39183371-39183871 1.82e-02 21_[+1(3.60e-06)]_57 chr5:40835067-40835567 1.07e-02 100 chr10:45726933-45727433 1.67e-08 51_[+7(6.68e-15)]_18 chr1:156740889-156741389 7.56e-10 22_[+8(3.09e-05)]_7_[+2(1.06e-10)]_\ 46 chr21:45287692-45288192 1.80e-02 17_[+1(2.47e-05)]_29_[+1(2.99e-06)]_\ 10 chr19:17209582-17210082 7.54e-04 9_[+2(5.03e-05)]_10_[-1(3.57e-07)]_\ 43 chr19:38975154-38975654 1.04e-04 6_[+4(1.42e-08)]_15_[+3(3.23e-05)]_\ 20 chr10:130110447-13011094 8.59e-02 54_[-2(3.95e-05)]_30 chr19:34134449-34134949 1.14e-01 100 chr2:197499753-197500253 5.55e-02 20_[+1(4.24e-05)]_58 chr19:6677836-6678336 3.05e-03 21_[-1(3.60e-06)]_8_[-1(2.18e-07)]_\ 27 chr10:75234105-75234605 2.82e-02 14_[-1(2.15e-05)]_64 chr1:155000785-155001285 6.55e-02 100 chr1:155002087-155002587 2.01e-03 46_[+3(1.25e-06)]_12_[+3(4.48e-07)]_\ 10 chr12:49060543-49061043 4.46e-02 1_[+3(2.22e-06)]_83 chr20:324231-324731 3.82e-01 100 chr10:67884310-67884810 5.00e-02 71_[-1(6.96e-05)]_7 chr1:226121554-226122054 1.40e-01 100 chr9:133030702-133031202 5.14e-01 100 chr6:30617048-30617548 4.25e-01 100 chr19:41959153-41959653 1.48e-04 83_[+2(1.03e-08)]_1 chr5:75511589-75512089 3.52e-04 2_[+3(1.84e-05)]_2_[-1(1.60e-05)]_\ 58 chr12:121799718-12180021 8.38e-02 42_[+3(2.35e-05)]_42 chr19:7871843-7872343 8.11e-07 16_[-1(1.68e-07)]_29_[+3(2.25e-07)]_\ 17 chr17:82273357-82273857 1.80e-01 100 chr19:1383557-1384057 9.13e-01 100 chr10:102114816-10211531 1.68e-05 18_[+1(4.04e-08)]_7_[+3(3.05e-07)]_\ 4_[+3(5.81e-05)]_17 chr7:42237309-42237809 1.66e-03 48_[-3(7.68e-08)]_5_[+1(6.96e-05)]_\ 9 chr17:16380755-16381255 4.98e-01 100 chr17:80415116-80415616 6.60e-01 100 chr9:137240304-137240804 9.83e-01 100 chr5:665553-666053 3.18e-08 28_[+1(1.60e-05)]_5_[+1(1.10e-06)]_\ [-2(8.67e-07)]_7 chr19:55081336-55081836 2.82e-03 17_[-1(5.15e-06)]_61 chr19:5686881-5687381 1.02e-03 19_[+1(3.57e-07)]_25_[+8(9.70e-05)]_\ 25 chr1:26432031-26432531 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34_[+1(1.38e-05)]_33_[+8(9.70e-05)]_\ 2 chr15:68277530-68278030 6.92e-03 7_[-3(2.22e-06)]_77 chr12:56079839-56080339 1.53e-06 48_[-3(3.92e-09)]_1_[+1(8.55e-06)]_\ 13 chr17:7234328-7234828 3.51e-01 100 chr16:30923121-30923621 4.62e-02 100 chr10:72625882-72626382 1.66e-01 10_[+1(6.17e-05)]_68 chr20:63432037-63432537 4.31e-01 100 chr2:109613968-109614468 2.02e-02 32_[-1(2.84e-05)]_9_[-1(3.26e-05)]_\ 15 chr20:63941591-63942091 3.10e-03 7_[-1(4.82e-05)]_33_[-1(6.12e-06)]_\ 16 chr19:6530686-6531186 4.30e-04 34_[-1(4.04e-08)]_3_[-8(3.09e-05)]_\ 11_[-8(3.09e-05)]_12 chr22:50508043-50508543 7.25e-01 100 chr12:1907471-1907971 4.06e-01 64_[-1(9.84e-05)]_14 chr1:236097024-236097524 7.30e-01 100 chrUn_KI270467v1:2000-25 1.06e-18 21_[+6(1.68e-14)]_11_[+6(4.62e-19)]_\ 6 chr10:102151941-10215244 1.51e-04 49_[+9(8.98e-11)]_29 chr12:49296449-49296949 5.76e-01 100 chr9:135188516-135189016 1.38e-02 13_[+1(5.46e-05)]_65 chr16:29807704-29808204 7.52e-01 100 chr15:82540311-82540811 7.20e-01 100 chr17:8138746-8139246 4.69e-02 100 chr5:139273804-139274304 1.82e-01 46_[+8(3.09e-05)]_13_[-8(9.70e-05)]_\ 23 chr21:32771774-32772274 3.88e-02 1_[+3(5.11e-06)]_83 chr19:36139745-36140245 6.93e-01 100 chr5:10353477-10353977 2.27e-04 18_[-3(1.10e-05)]_27_[-3(2.57e-08)]_\ [-3(6.90e-06)]_7 chr1:16122830-16123330 1.55e-02 54_[-7(9.56e-06)]_15 chr16:29805289-29805789 2.47e-02 33_[-1(2.84e-05)]_45 chr6:37169503-37170003 2.93e-02 35_[-3(9.93e-05)]_49 chr7:892965-893465 3.14e-06 20_[-5(1.01e-06)]_4_[-5(4.79e-08)]_\ 14 chr6:30907821-30908321 6.54e-03 62_[+2(4.76e-08)]_22 chr9:128656575-128657075 7.26e-04 43_[-9(6.06e-09)]_35 chr12:121888467-12188896 2.31e-02 43_[+1(1.67e-06)]_35 chr7:129224527-129225027 1.44e-04 25_[-2(1.53e-08)]_10_[+8(9.70e-05)]_\ 40 chr1:26620532-26621032 8.85e-01 100 chr1:225999200-225999700 8.79e-03 1_[+8(9.70e-05)]_12_[-3(7.14e-05)]_\ 46_[+3(6.90e-06)] chr1:229558632-229559132 4.78e-01 100 chr20:63350817-63351317 2.90e-06 17_[+3(1.55e-05)]_4_[+5(5.15e-05)]_\ 2_[+1(8.91e-07)]_8 chr6:41920945-41921445 2.24e-01 100 chr16:30957554-30958054 9.69e-01 100 chr19:34134249-34134749 3.33e-03 6_[-1(5.71e-07)]_72 chr1:225777505-225778005 4.45e-03 21_[+1(2.99e-06)]_24_[+7(7.64e-05)]_\ 2 chr19:40690649-40691149 1.42e-02 66_[-7(6.77e-06)]_3 chr10:97334658-97335158 1.21e-01 100 chr21:25607279-25607779 2.61e-02 27_[-3(2.99e-05)]_57 chr15:65610922-65611422 6.70e-01 100 chr19:35947343-35947843 3.05e-09 55_[-5(8.40e-14)]_14 chr12:54359108-54359608 2.01e-02 58_[+3(6.90e-06)]_26 chr19:8389860-8390360 4.27e-04 10_[+4(5.32e-05)]_11_[+8(9.70e-05)]_\ 27 chr15:76905015-76905515 5.98e-01 100 chr16:23149327-23149827 9.86e-01 100 chr19:41262177-41262677 2.30e-01 100 chr1:228109113-228109613 2.78e-03 24_[+3(7.14e-05)]_34_[-8(9.70e-05)]_\ 17 chr19:49641775-49642275 1.26e-02 36_[-2(3.74e-07)]_12_[+8(9.70e-05)]_\ 27 chr17:43842498-43842998 9.02e-03 6_[-3(9.05e-06)]_18_[-3(9.05e-06)]_\ 6_[-3(9.05e-06)]_6_[-3(9.05e-06)] chr14:90383181-90383681 7.68e-01 100 chr19:39308384-39308884 1.77e-02 [+8(3.09e-05)]_3_[+1(8.79e-05)]_66 chr15:65869107-65869607 1.69e-01 88_[-8(9.70e-05)]_3 chr2:97995933-97996433 3.80e-04 15_[+3(2.61e-07)]_18_[+9(5.29e-05)]_\ 29 chr19:35931416-35931916 4.42e-08 9_[-1(6.96e-05)]_40_[+2(1.45e-10)]_\ 13 chr12:53727356-53727856 4.91e-05 23_[-1(2.15e-05)]_26_[+2(5.68e-08)]_\ 13 chr14:73027009-73027509 6.96e-06 6_[+2(4.19e-06)]_50_[-2(9.26e-10)]_\ 12 chr17:59619547-59620047 9.68e-01 100 chr19:39341737-39342237 1.61e-02 45_[-1(4.82e-05)]_33 chr5:37371070-37371570 9.58e-04 17_[+3(5.18e-07)]_12_[+3(1.30e-05)]_\ 2_[-1(2.15e-05)]_15 chr1:24744889-24745389 6.15e-03 64_[+1(5.71e-07)]_14 chr1:36224005-36224505 3.95e-01 100 chr4:77075910-77076410 2.23e-01 80_[+3(4.05e-05)]_4 chr14:103628805-10362930 1.54e-01 8_[-7(8.20e-05)]_61 chr10:97687228-97687728 3.58e-01 100 chr12:121399705-12140020 8.38e-02 40_[+1(1.86e-05)]_38 chr12:132828725-13282922 8.50e-01 100 chr12:52069581-52070081 4.25e-01 100 chr1:45521696-45522196 2.04e-02 63_[+3(9.78e-07)]_21 chr1:228139955-228140455 1.58e-02 25_[+3(3.47e-05)]_5_[-8(9.70e-05)]_\ 45 chr3:129121885-129122385 1.59e-01 48_[+1(3.72e-05)]_30 chr1:183471795-183472295 2.81e-02 48_[+3(1.12e-06)]_36 chr17:74514051-74514551 7.00e-21 11_[+7(4.02e-18)]_4_[+10(1.40e-07)]_\ 10_[+10(1.31e-11)]_2 chr19:35643407-35643907 8.45e-01 100 chr19:35758253-35758753 2.32e-03 12_[+4(8.49e-06)]_45 chr19:41859514-41860014 7.74e-03 65_[-3(8.27e-06)]_19 chr17:3890035-3890535 6.02e-01 100 chr19:58519475-58519975 2.34e-01 1_[+1(9.84e-05)]_28_[+1(4.82e-05)]_\ 27 chr19:55643334-55643834 1.20e-02 63_[+8(9.70e-05)]_28 chrUn_KI270467v1:2896-33 3.88e-25 [+6(1.99e-18)]_[+4(3.52e-19)]_26 chr10:5889838-5890338 3.09e-01 1_[-8(3.09e-05)]_90 chr19:41884091-41884591 3.76e-02 3_[+3(7.14e-05)]_81 chr19:46600818-46601318 2.26e-01 100 chr19:17337112-17337612 6.14e-04 28_[+7(8.95e-05)]_10_[+1(9.84e-05)]_\ 9 chr17:77233792-77234292 7.07e-08 42_[-4(2.18e-09)]_15 chr12:132305192-13230569 4.42e-08 14_[+5(4.84e-15)]_17_[+5(5.08e-13)]_\ 7 chr19:1905015-1905515 6.99e-04 16_[-1(2.15e-05)]_13_[+2(2.54e-07)]_\ 33 chr21:39313508-39314008 7.27e-01 100 chr4:731948-732448 1.57e-02 13_[-8(3.09e-05)]_35_[-1(1.60e-05)]_\ 21 chr8:144580377-144580877 5.24e-04 38_[+1(1.29e-07)]_16_[+1(1.68e-07)]_\ 2 chr19:35558010-35558510 3.71e-03 43_[+3(2.00e-05)]_41 chr12:132304551-13230505 1.45e-08 15_[+5(1.49e-14)]_1_[+5(8.22e-13)]_\ 22 chr4:731298-731798 3.72e-03 18_[-1(6.12e-06)]_5_[-8(9.70e-05)]_\ 19_[-8(3.09e-05)]_18 chr1:40257837-40258337 2.06e-01 100 chr17:43842299-43842799 3.85e-03 19_[-3(3.39e-06)]_6_[-3(9.05e-06)]_\ 6_[-3(9.05e-06)]_21 chr5:5422185-5422685 1.05e-01 100 chr1:153958492-153958992 1.59e-03 26_[-2(9.69e-08)]_36_[+1(4.24e-05)] chr1:155244584-155245084 3.54e-02 3_[+3(2.61e-07)]_16_[+3(3.48e-07)]_\ 14_[+3(8.56e-09)]_19 chr8:37736321-37736821 6.68e-02 100 chr12:12266919-12267419 4.00e-02 23_[+5(3.11e-05)]_46 chr19:40609837-40610337 3.33e-03 6_[+1(7.25e-06)]_72 chr19:42280287-42280787 3.20e-01 100 chr22:41446615-41447115 2.61e-01 68_[-1(6.17e-05)]_10 chr20:45972092-45972592 9.09e-01 100 chr17:42998040-42998540 2.79e-01 100 chr12:132303862-13230436 6.61e-10 16_[+5(4.90e-16)]_1_[+5(1.19e-12)]_\ 21 chr19:41310152-41310652 1.31e-01 76_[+10(9.65e-05)]_3 chr17:7242761-7243261 1.37e-06 62_[+10(6.49e-10)]_17 chr17:17206306-17206806 4.87e-04 8_[+1(2.47e-05)]_9_[+1(7.16e-07)]_\ 39 chr19:35628757-35629257 1.04e-01 100 chr19:17202202-17202702 1.18e-02 100 chr6:3118361-3118861 3.18e-03 26_[-8(3.09e-05)]_4_[-8(9.70e-05)]_\ 2_[-1(1.18e-05)]_5_[-1(1.10e-06)]_1 chr19:44259625-44260125 6.46e-06 24_[+2(4.70e-10)]_60 chr19:40444306-40444806 2.79e-02 1_[-1(2.15e-05)]_77 chr19:39833871-39834371 8.58e-01 100 chr10:132752301-13275280 1.15e-03 8_[-8(3.09e-05)]_2_[-1(1.10e-06)]_6_\ [-1(1.60e-05)]_6_[-1(3.60e-06)]_3 chr21:46635786-46636286 6.61e-04 17_[+1(4.53e-07)]_19_[+1(4.31e-06)]_\ 20 chr22:41468712-41469212 2.28e-02 100 chr16:89142383-89142883 2.71e-07 13_[+5(3.94e-11)]_3_[+5(2.04e-11)]_\ 22 chr7:1011242-1011742 8.04e-11 12_[+5(1.31e-14)]_13_[+5(1.85e-12)]_\ 13 chr19:49712290-49712790 5.11e-06 1_[-1(7.16e-07)]_[-8(3.09e-05)]_2_\ [+3(1.76e-06)]_27_[-1(8.91e-07)]_1 chr17:78558299-78558799 1.54e-02 34_[-4(1.29e-06)]_23 chr1:234723900-234724400 6.36e-05 8_[+3(8.56e-09)]_8_[+3(1.37e-08)]_\ 19_[+3(1.47e-07)]_17 chrX:15737907-15738407 3.09e-02 78_[-8(4.21e-05)]_13 chr17:7836700-7837200 3.00e-03 9_[-3(3.47e-05)]_48_[-3(7.58e-06)]_\ 11 chr12:124914546-12491504 3.03e-01 48_[+4(6.27e-05)]_9 chr6:169840248-169840748 1.86e-04 10_[+1(7.25e-06)]_30_[+1(1.01e-05)]_\ 16 chr15:67254500-67255000 1.35e-02 43_[+1(6.96e-05)]_35 chr3:9731298-9731798 2.56e-01 100 chr19:47778288-47778788 9.18e-01 100 chr19:1652609-1653109 6.54e-01 100 chr17:78140322-78140822 2.67e-03 8_[-1(1.01e-05)]_70 chr19:1062951-1063451 7.06e-03 19_[+1(2.84e-05)]_22_[+8(9.70e-05)]_\ 28 chr21:46264680-46265180 7.00e-04 70_[+1(4.82e-05)]_8 chr19:7829780-7830280 2.35e-02 13_[+6(5.44e-05)]_56 chr6:169840042-169840542 5.12e-04 32_[+1(4.53e-07)]_46 chrX:1452896-1453396 1.55e-03 22_[+1(3.60e-06)]_25_[+8(3.09e-05)]_\ 22 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (10) found. ******************************************************************************** CPU: kali ********************************************************************************