**************************** FASTAtoRF version 1.01 *************************** *.............................................................................* * Copyright 2014 Hamed S. Najafabadi .........................................* *.............................................................................* *.............................................................................* Received parameters: Input FASTA file: /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/C2H2ProteinSequences/KLF13.fa Randomize ZF sequences: 0 The zinc-finger span for each motif: 2 The minimum linker length between two ZFs: 2 The maximum linker length between two ZFs: 8 Output file: ./tmp/KLF13.IDR0.05.filt.narrowPeak/_predict.in.span2 Opening the FASTA file... EOL candidate no. 1 was approved. Reading FASTA sequences... 1 sequences were read. Finding C2H2 zinc fingers... Writing the output... Job finished successfully. **************************** FASTAtoRF version 1.01 *************************** *.............................................................................* * Copyright 2014 Hamed S. Najafabadi .........................................* *.............................................................................* *.............................................................................* Received parameters: Input FASTA file: /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/C2H2ProteinSequences/KLF13.fa Randomize ZF sequences: 0 The zinc-finger span for each motif: 3 The minimum linker length between two ZFs: 2 The maximum linker length between two ZFs: 8 Output file: ./tmp/KLF13.IDR0.05.filt.narrowPeak/_predict.in.span3 Opening the FASTA file... EOL candidate no. 1 was approved. Reading FASTA sequences... 1 sequences were read. Finding C2H2 zinc fingers... Writing the output... Job finished successfully. **************************** FASTAtoRF version 1.01 *************************** *.............................................................................* * Copyright 2014 Hamed S. Najafabadi .........................................* *.............................................................................* *.............................................................................* Received parameters: Input FASTA file: /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/C2H2ProteinSequences/KLF13.fa Randomize ZF sequences: 0 The zinc-finger span for each motif: 4 The minimum linker length between two ZFs: 2 The maximum linker length between two ZFs: 8 Output file: ./tmp/KLF13.IDR0.05.filt.narrowPeak/_predict.in.span4 Opening the FASTA file... EOL candidate no. 1 was approved. Reading FASTA sequences... 1 sequences were read. Finding C2H2 zinc fingers... Writing the output... Job finished successfully. **************************** FASTAtoRF version 1.01 *************************** *.............................................................................* * Copyright 2014 Hamed S. Najafabadi .........................................* *.............................................................................* *.............................................................................* Received parameters: Input FASTA file: /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/C2H2ProteinSequences/KLF13.fa Randomize ZF sequences: 0 The zinc-finger span for each motif: 5 The minimum linker length between two ZFs: 2 The maximum linker length between two ZFs: 8 Output file: ./tmp/KLF13.IDR0.05.filt.narrowPeak/_predict.in.span5 Opening the FASTA file... EOL candidate no. 1 was approved. Reading FASTA sequences... 1 sequences were read. Finding C2H2 zinc fingers... Writing the output... Job finished successfully. **************************** FASTAtoRF version 1.01 *************************** *.............................................................................* * Copyright 2014 Hamed S. Najafabadi .........................................* *.............................................................................* *.............................................................................* Received parameters: Input FASTA file: /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/C2H2ProteinSequences/KLF13.fa Randomize ZF sequences: 0 The zinc-finger span for each motif: 6 The minimum linker length between two ZFs: 2 The maximum linker length between two ZFs: 8 Output file: ./tmp/KLF13.IDR0.05.filt.narrowPeak/_predict.in.span6 Opening the FASTA file... EOL candidate no. 1 was approved. Reading FASTA sequences... 1 sequences were read. Finding C2H2 zinc fingers... Writing the output... Job finished successfully. **************************** FASTAtoRF version 1.01 *************************** *.............................................................................* * Copyright 2014 Hamed S. Najafabadi .........................................* *.............................................................................* *.............................................................................* Received parameters: Input FASTA file: /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/C2H2ProteinSequences/KLF13.fa Randomize ZF sequences: 0 The zinc-finger span for each motif: 7 The minimum linker length between two ZFs: 2 The maximum linker length between two ZFs: 8 Output file: ./tmp/KLF13.IDR0.05.filt.narrowPeak/_predict.in.span7 Opening the FASTA file... EOL candidate no. 1 was approved. Reading FASTA sequences... 1 sequences were read. Finding C2H2 zinc fingers... Writing the output... Job finished successfully. **************************** FASTAtoRF version 1.01 *************************** *.............................................................................* * Copyright 2014 Hamed S. Najafabadi .........................................* *.............................................................................* *.............................................................................* Received parameters: Input FASTA file: /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/C2H2ProteinSequences/KLF13.fa Randomize ZF sequences: 0 The zinc-finger span for each motif: 8 The minimum linker length between two ZFs: 2 The maximum linker length between two ZFs: 8 Output file: ./tmp/KLF13.IDR0.05.filt.narrowPeak/_predict.in.span8 Opening the FASTA file... EOL candidate no. 1 was approved. Reading FASTA sequences... 1 sequences were read. Finding C2H2 zinc fingers... Writing the output... Job finished successfully. **************************** FASTAtoRF version 1.01 *************************** *.............................................................................* * Copyright 2014 Hamed S. Najafabadi .........................................* *.............................................................................* *.............................................................................* Received parameters: Input FASTA file: /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/C2H2ProteinSequences/KLF13.fa Randomize ZF sequences: 0 The zinc-finger span for each motif: 9 The minimum linker length between two ZFs: 2 The maximum linker length between two ZFs: 8 Output file: ./tmp/KLF13.IDR0.05.filt.narrowPeak/_predict.in.span9 Opening the FASTA file... EOL candidate no. 1 was approved. Reading FASTA sequences... 1 sequences were read. Finding C2H2 zinc fingers... Writing the output... Job finished successfully. **************************** FASTAtoRF version 1.01 *************************** *.............................................................................* * Copyright 2014 Hamed S. Najafabadi .........................................* *.............................................................................* *.............................................................................* Received parameters: Input FASTA file: /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/C2H2ProteinSequences/KLF13.fa Randomize ZF sequences: 0 The zinc-finger span for each motif: 10 The minimum linker length between two ZFs: 2 The maximum linker length between two ZFs: 8 Output file: ./tmp/KLF13.IDR0.05.filt.narrowPeak/_predict.in.span10 Opening the FASTA file... EOL candidate no. 1 was approved. Reading FASTA sequences... 1 sequences were read. Finding C2H2 zinc fingers... Writing the output... Job finished successfully. **************************** FASTAtoRF version 1.01 *************************** *.............................................................................* * Copyright 2014 Hamed S. Najafabadi .........................................* *.............................................................................* *.............................................................................* Received parameters: Input FASTA file: /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/C2H2ProteinSequences/KLF13.fa Randomize ZF sequences: 0 The zinc-finger span for each motif: 11 The minimum linker length between two ZFs: 2 The maximum linker length between two ZFs: 8 Output file: ./tmp/KLF13.IDR0.05.filt.narrowPeak/_predict.in.span11 Opening the FASTA file... EOL candidate no. 1 was approved. Reading FASTA sequences... 1 sequences were read. Finding C2H2 zinc fingers... Writing the output... Job finished successfully. **************************** FASTAtoRF version 1.01 *************************** *.............................................................................* * Copyright 2014 Hamed S. Najafabadi .........................................* *.............................................................................* *.............................................................................* Received parameters: Input FASTA file: /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/C2H2ProteinSequences/KLF13.fa Randomize ZF sequences: 0 The zinc-finger span for each motif: 12 The minimum linker length between two ZFs: 2 The maximum linker length between two ZFs: 8 Output file: ./tmp/KLF13.IDR0.05.filt.narrowPeak/_predict.in.span12 Opening the FASTA file... EOL candidate no. 1 was approved. Reading FASTA sequences... 1 sequences were read. Finding C2H2 zinc fingers... Writing the output... Job finished successfully. **************************** FASTAtoRF version 1.01 *************************** *.............................................................................* * Copyright 2014 Hamed S. Najafabadi .........................................* *.............................................................................* *.............................................................................* Received parameters: Input FASTA file: /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/C2H2ProteinSequences/KLF13.fa Randomize ZF sequences: 0 The zinc-finger span for each motif: 13 The minimum linker length between two ZFs: 2 The maximum linker length between two ZFs: 8 Output file: ./tmp/KLF13.IDR0.05.filt.narrowPeak/_predict.in.span13 Opening the FASTA file... EOL candidate no. 1 was approved. Reading FASTA sequences... 1 sequences were read. Finding C2H2 zinc fingers... Writing the output... Job finished successfully. **************************** FASTAtoRF version 1.01 *************************** *.............................................................................* * Copyright 2014 Hamed S. Najafabadi .........................................* *.............................................................................* *.............................................................................* Received parameters: Input FASTA file: /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/C2H2ProteinSequences/KLF13.fa Randomize ZF sequences: 0 The zinc-finger span for each motif: 14 The minimum linker length between two ZFs: 2 The maximum linker length between two ZFs: 8 Output file: ./tmp/KLF13.IDR0.05.filt.narrowPeak/_predict.in.span14 Opening the FASTA file... EOL candidate no. 1 was approved. Reading FASTA sequences... 1 sequences were read. Finding C2H2 zinc fingers... Writing the output... Job finished successfully. **************************** FASTAtoRF version 1.01 *************************** *.............................................................................* * Copyright 2014 Hamed S. Najafabadi .........................................* *.............................................................................* *.............................................................................* Received parameters: Input FASTA file: /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/C2H2ProteinSequences/KLF13.fa Randomize ZF sequences: 0 The zinc-finger span for each motif: 15 The minimum linker length between two ZFs: 2 The maximum linker length between two ZFs: 8 Output file: ./tmp/KLF13.IDR0.05.filt.narrowPeak/_predict.in.span15 Opening the FASTA file... EOL candidate no. 1 was approved. Reading FASTA sequences... 1 sequences were read. Finding C2H2 zinc fingers... Writing the output... Job finished successfully.