******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 4.12.0 (Release date: Tue Jun 27 16:22:50 2017 -0700) For further information on how to interpret these results or to get a copy of the MEME software please access http://meme-suite.org . This file may be used as input to the MAST algorithm for searching sequence databases for matches to groups of motifs. MAST is available for interactive use and downloading at http://meme-suite.org . ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** DATAFILE= /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/KLF13.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/seqs-centered ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chr15:74614640-74615140 1.0000 100 chr9:137156920-137157420 1.0000 100 chr5:56123720-56124220 1.0000 100 chr17:28728486-28728986 1.0000 100 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chr19:41706699-41707199 1.0000 100 chr16:2682219-2682719 1.0000 100 chrUn_KI270467v1:2038-25 1.0000 100 chr10:50067621-50068121 1.0000 100 chr15:84980629-84981129 1.0000 100 chr16:28924634-28925134 1.0000 100 chr19:4723769-4724269 1.0000 100 chr5:176388744-176389244 1.0000 100 chr19:35903637-35904137 1.0000 100 chr10:93702438-93702938 1.0000 100 chr1:27321854-27322354 1.0000 100 chr11:47578730-47579230 1.0000 100 chr19:17202251-17202751 1.0000 100 chr1:37989786-37990286 1.0000 100 chr6:110179723-110180223 1.0000 100 chr19:6677828-6678328 1.0000 100 chr1:236097023-236097523 1.0000 100 chr19:37594313-37594813 1.0000 100 chr14:24114576-24115076 1.0000 100 chr10:17201428-17201928 1.0000 100 chr19:36604694-36605194 1.0000 100 chr19:40570494-40570994 1.0000 100 chr17:77233797-77234297 1.0000 100 chr1:183471823-183472323 1.0000 100 chr1:40257848-40258348 1.0000 100 chr5:1950692-1951192 1.0000 100 chr19:43475186-43475686 1.0000 100 chr2:241881440-241881940 1.0000 100 chr19:17075237-17075737 1.0000 100 chr19:55643343-55643843 1.0000 100 chr5:134371102-134371602 1.0000 100 chr17:17206273-17206773 1.0000 100 chr21:39313505-39314005 1.0000 100 chr19:38335508-38336008 1.0000 100 chr6:157323332-157323832 1.0000 100 chr14:22982550-22983050 1.0000 100 chr19:36114733-36115233 1.0000 100 chr19:39390668-39391168 1.0000 100 chr19:41310148-41310648 1.0000 100 chr16:88882182-88882682 1.0000 100 chr12:116910645-11691114 1.0000 100 chr7:876170-876670 1.0000 100 chr4:77075938-77076438 1.0000 100 chr19:46600765-46601265 1.0000 100 chr12:49060548-49061048 1.0000 100 chr1:54715544-54716044 1.0000 100 chr17:82273275-82273775 1.0000 100 chrX:73944015-73944515 1.0000 100 chr1:25998135-25998635 1.0000 100 chr12:132828692-13282919 1.0000 100 chr12:12266881-12267381 1.0000 100 chr12:57752241-57752741 1.0000 100 chr1:3992025-3992525 1.0000 100 chr12:1907471-1907971 1.0000 100 chr21:44810816-44811316 1.0000 100 chr17:7836739-7837239 1.0000 100 chr19:38402953-38403453 1.0000 100 chr19:33080940-33081440 1.0000 100 chr8:25458845-25459345 1.0000 100 chr1:154558621-154559121 1.0000 100 chr17:78558297-78558797 1.0000 100 chr16:1271747-1272247 1.0000 100 chr15:67254496-67254996 1.0000 100 chrUn_KI270467v1:2770-32 1.0000 100 chr10:101830475-10183097 1.0000 100 chr1:228109140-228109640 1.0000 100 chr19:40444335-40444835 1.0000 100 chr19:17337092-17337592 1.0000 100 chr19:1652592-1653092 1.0000 100 chrX:15737879-15738379 1.0000 100 chr10:97687168-97687668 1.0000 100 chr19:35557995-35558495 1.0000 100 chr17:7242740-7243240 1.0000 100 chr15:65868966-65869466 1.0000 100 chr19:49363383-49363883 1.0000 100 chr10:132752267-13275276 1.0000 100 chr16:30957582-30958082 1.0000 100 chr19:47778292-47778792 1.0000 100 chr16:89008739-89009239 1.0000 100 chr19:39125748-39126248 1.0000 100 chr9:132944470-132944970 1.0000 100 chr6:169840137-169840637 1.0000 100 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/KLF13.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/seqs-centered -oc /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/KLF13.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/meme_out -mod zoops -nmotifs 10 -minw 5 -maxw 50 -bfile /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/KLF13.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/background -dna -revcomp -nostatus model: mod= zoops nmotifs= 10 evt= inf object function= E-value of product of p-values width: minw= 5 maxw= 50 width: wg= 11 ws= 1 endgaps= yes nsites: minsites= 2 maxsites= 600 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 global: substring= yes branching= no wbranch= no em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 data: n= 60000 N= 600 shuffle= -1 strands: + - sample: seed= 0 ctfrac= -1 maxwords= -1 Letter frequencies in dataset: A 0.182 C 0.318 G 0.318 T 0.182 Background letter frequencies (from /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/KLF13.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/background): A 0.189 C 0.311 G 0.311 T 0.189 ******************************************************************************** ******************************************************************************** MOTIF GRRGKGGGCGKGGCBG MEME-1 width = 16 sites = 309 llr = 2591 E-value = 2.3e-191 ******************************************************************************** -------------------------------------------------------------------------------- Motif GRRGKGGGCGKGGCBG MEME-1 Description -------------------------------------------------------------------------------- Simplified A 134211:::::11112 pos.-specific C 221:::::8:::1642 probability G 5438599a:a686225 matrix T 112:4:1:2:412132 bits 2.4 2.2 1.9 1.7 * * Relative 1.4 *** * Entropy 1.2 ***** (12.1 bits) 1.0 * ***** 0.7 ********* 0.5 ********** 0.2 ************** * 0.0 ---------------- Multilevel GGAGGGGGCGGGGCCG consensus CAG T T TGT sequence T -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GRRGKGGGCGKGGCBG MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ---------------- chr1:154973605-154974105 + 29 4.94e-08 CGTGGATTAC GGAGGGGGCGTGGCTT CGGAGGGGCG chr6:6686927-6687427 - 51 4.94e-08 GGTGAGGACT GGAGTGGGCGGGGCTT CCAGCCAGGA chr19:8922495-8922995 + 10 6.87e-08 GACCAGGGT GAGGTGGGCGTGGCTG AAATCAGTGG chr1:235504255-235504755 - 7 6.87e-08 AAGGCCAGGC GGAGGGGGCGGGGCTT CGGCCG chr6:169840137-169840637 - 13 1.02e-07 GGTGTGGTCT GGAGTGGGCGTGGGTG GGTGTGGTGT chr7:100852153-100852653 - 38 1.02e-07 AAGCGGCAGG GAGGTGGGCGGGGCTG CAACACCTGG chr16:70800932-70801432 - 77 1.02e-07 CGGCCTGC GGTGGGGGCGTGGCTG GAGAGGGGCG chr17:7435136-7435636 + 70 1.49e-07 ACAGCCTCCA GAAAGGGGCGTGGCTG AAAATGTAGG chr19:42302169-42302669 - 10 1.49e-07 GCGAGGGGTA GGAGTGGGCGTGGCGG AGCCAGCTC chr19:17293879-17294379 - 83 2.08e-07 CC CGAGGGGGCGTGGCTG CCGGGTGGGC chr19:49867364-49867864 - 61 2.84e-07 CGGGAGTCGG GGAAGGGGCGTGGCTG CTGTGGGAGG chr19:43533781-43534281 - 61 2.84e-07 CTGCAGTCCT GGAATGGGCGGGGCTG TACAAAAAAA chr19:39125748-39126248 + 42 3.71e-07 TTTCCGCGAG GAGGGGGGCGGGGCCG CCGGGGTCAA chr5:138352203-138352703 - 49 3.71e-07 CCGGGGTAGG GAAGTGGGCGGGTCCT TCAGCTTCCC chr19:39480576-39481076 + 45 4.81e-07 GAAGAGGGAG CGAGTGGGCGGGGCCG CGTGGCGTCA chr15:45200281-45200781 - 57 4.81e-07 AATGACATTG CAAGGGGGCGGGGCTT TCAACAGAGA chr12:56152317-56152817 - 73 4.81e-07 CTGGGGCTGG GGAGGGGGCGGGGCAT AGCGCGGCCC chr9:137423034-137423534 + 77 6.25e-07 CTGAGGGTCT GGAGTGGGCGTAGCCG TTTCTGGC chr22:31661949-31662449 - 80 8.03e-07 CGTGT GAAGGGGGCGTGGCAC GCTGAGAAGG chr10:97687168-97687668 + 33 1.03e-06 GGAGCGGCGG TGAGGGGGCGTGTCTG CCCGGGCCCT chr19:6161189-6161689 + 76 1.03e-06 gtgaggaaag gaaGTGGGTGGGGCCT TGTGAGGAA chrX:15737879-15738379 + 5 1.31e-06 GGGC GAGAGGGGCGTGGCTG TAGCTAAAGG chr19:17075237-17075737 - 32 1.31e-06 GACCCGCAAG CAAGGGGGCGGGTCCG GCTTTGAAAA chr19:6677828-6678328 + 60 1.31e-06 gcgtgacaat ggtgtgggcgtggcat gggcggggcA chr5:180494025-180494525 + 18 1.31e-06 AGCGCGGGGG TAAGGGGGCGGGGCCT GGGCAGCTGC chr7:75914819-75915319 - 55 1.31e-06 CGGCCGCGGG GGTGGGGGCGTGGCCA TTGGGCCGCC chr1:171741866-171742366 + 34 1.31e-06 GGCGCCAGGC GGAGGGGGCGGGTCCA GGGCACGGAG chr18:12377198-12377698 + 84 1.31e-06 GCGAGCGAGA GCTGGGGGCGGGGCTG A chr17:74776112-74776612 - 62 1.31e-06 CAGCATGGCG GAAGTGGGCGGGGCGC GTTCTCACGC chr9:137156920-137157420 + 5 1.31e-06 TGGG GAGGTGGGCGGGGCCA CTCTCCAGAG chr19:49580372-49580872 - 20 1.66e-06 CTGCTGGGCG GAAGTGGGCGGAGCGG AGGGGGAAAA chr20:35771609-35772109 + 51 1.66e-06 GCGCGTCAGG GTAGTGGGCGTGGCCT GCGCAGGCCG chr19:55624405-55624905 + 73 1.66e-06 gcgtggtgca gcagggggcgtggcgg ggcggggcgt chr5:139403659-139404159 - 21 1.66e-06 ATGCCTCACT GGTGGGGGCGGGGCCA GAACCTGTTC chr2:219552489-219552989 - 57 1.66e-06 AAGGGGGCGT GGAGGGGGCGTGACCG GTAACTGCCC chr2:241881440-241881940 + 38 2.08e-06 AGGGGGCCGT GCAGGGGGCGTGGCCA CGAGCGAGGA chr19:48321769-48322269 - 46 2.08e-06 GGGTGTAACC AGAGGGGGCGTGGCCA GAAACCGGGG chr18:74495855-74496355 - 16 2.08e-06 GGTAGACGGG GATGTGGGCGTGGCGA GGGGGCGGAG chr1:24744931-24745431 - 29 2.08e-06 CCCACAGCTG GTAGGGGGCGTGGCCT TGGTGGGCGG chr10:102743415-10274391 - 49 2.08e-06 AGCAGCTTCA TAAGGGGGCGGGGCCA CCCAGGTGGA chr9:113401128-113401628 - 67 2.08e-06 GGCCTCGTTG CGTGTGGGCGGGGCCG CGGCTGGAGC chr7:103074628-103075128 + 29 2.08e-06 GTCCCGGCAA CCAGGGGGCGGGGCTG GGCGTGGCAC chr19:35869574-35870074 + 34 2.08e-06 GTACTGCAGA CAGGTGGGCGGGGCCG AACGGGAGAG chr12:52023584-52024084 + 43 2.08e-06 GCGGGTCCTG GTAGGGGGCGTGGCCT GGCCGACTTG chr2:121076799-121077299 + 83 2.08e-06 gggaagaagc aaggtgggcggggccg gc chr19:40570494-40570994 + 40 2.56e-06 AACCGGTGAG CGTGTGGGCGGGGCTT TGGAAGGCGG chr19:7871907-7872407 + 25 2.56e-06 AGGGGCTAGA GGAAGGGGCGTGGCCA ACTGACAGGT chr16:89142387-89142887 - 17 3.12e-06 GGTGTCTGCA GGTGTGGGTGTGTCTG CAGGTGTGGC chr12:64759205-64759705 + 74 3.12e-06 CGTGACGGCC GGCGTGGGCGGGGCTG CGGACTGGCG chr19:33521613-33522113 + 32 3.12e-06 taagggcggg gcagggggcggggcAT GGAGTCCTTG chr6:37819212-37819712 + 31 3.12e-06 CGCACGCCGG GGAGGGGGCGGAGCGG CCATTGTCCG chr5:173331937-173332437 - 10 3.12e-06 CAGTCGGCCC CAAGGGGGCGGGGCGT GCAGTGGGT chr19:47428128-47428628 + 81 3.12e-06 ATGACTGATG GATGGGGGTGTGGCTA GTGG chr7:1011206-1011706 - 56 3.12e-06 GGTGTGTCTG GGTGTGGGTGTGTCTG GGTGTCTGTG chr17:82273275-82273775 - 6 3.80e-06 GCGGGGCCGT GAGGGGGGCGGAGCCG GGAGC chr19:54417022-54417522 - 45 3.80e-06 GTAATGGGAG TAAGTGGGTGTGTCTG AGTGTGCCTG chr17:45161326-45161826 - 39 3.80e-06 AGATCCGGCT AAGGTGGGCGGGGCAG CAGGCGCGGA chr19:7870602-7871102 + 34 3.80e-06 GGGCGTCTCC GGAGGGGGCGTGGTCA ATGGCGAAGG chr17:48830768-48831268 + 7 3.80e-06 TTGTGA CGTGTGGGCGGGGCAG GCGGGACGGG chr19:33080940-33081440 + 27 4.60e-06 GCCGCCGTAG CGAGGGGGCGGGGCCC GGAAGAGCAG chr9:136342690-136343190 + 58 4.60e-06 GTCCATGGGG GCGGTGGGCGTGGCAG AGGCTGGTGG chr19:11346420-11346920 - 79 4.60e-06 ATTTAG GGAGGGGGCGGGGTCA TCATCCTGGC chr19:35903637-35904137 + 76 5.54e-06 GGTGAGGGCG GAGATGGGCGGGGCCT GGAAGGTGT chr19:3573851-3574351 - 62 5.54e-06 GTTGACTTCG GTTGTGGGCGTGGCCT CTGCTTGGTG chr19:6767420-6767920 - 13 5.54e-06 GTGCGATGCA GAAGGAGGCGTGGCTA GTAGCAAAAA chr1:244864385-244864885 - 53 5.54e-06 GGTAAGTACG GTAATGGGCGGGGCCG AGCGCGGGCG chr16:88882182-88882682 + 16 6.63e-06 TATGGCTGTG TGTGTGGGTGTGGCTG TGTGTGTATG chr12:132305303-13230580 - 71 6.63e-06 GTTGTGCCCG GGTGAGGGCGTGTCTG GGTGAGGGTG chr9:137022003-137022503 + 2 6.63e-06 G AGTGGGGGCGTGGCTC AGATGGTGGG chr1:92080231-92080731 - 60 6.63e-06 CCAGGAGGAA GAAGGGGGCGTTTCCG ACCGAACGCT chr1:15246916-15247416 - 60 6.63e-06 CAGCCTAATA GATGAGGGCGTGGCCT GCGCGGCAGA chr17:17206273-17206773 - 79 7.90e-06 GGGCGT GACGGGGGCGTGGCCT GGCGTGTGGC chr11:112961078-11296157 - 39 7.90e-06 GGAGCGAGGA GCGGGGGGCGGGGGTG AGAACCTCAC chr1:33181900-33182400 - 65 7.90e-06 GCTGGAGGAT GGTGGGGGTGGGGCGG GGTCAACCGG chr16:89008739-89009239 - 36 9.37e-06 CTGCAAAGAT GAGGTGGGTGTGTCAG GGTCCTCCTG chr15:65868966-65869466 - 9 9.37e-06 TGGGTTTGTG GATGGGGGCGGGGTTC TCTGAGGA chr1:54715544-54716044 - 24 9.37e-06 GTTCCGCCGG CCTGGGGGCGTGGCCG GGCGTGGCCA chr8:10839693-10840193 + 39 9.37e-06 CACGCGGCGG CGAGGGGGCGGAGCAG GGCGGGGCAA chr11:72223089-72223589 + 44 9.37e-06 TCTTTTTTTG GGAGGGGGCGGGCCAG ACCCTTTTAT chr1:2586348-2586848 + 80 9.37e-06 GGGGCGAATC CGAGGGGGCGGAGCAG GGCTC chr17:35947063-35947563 + 54 9.37e-06 TCAGGTAGAG GAAGTGGGCGTTTCAG GGCTTGAATG chr1:228130882-228131382 - 11 9.37e-06 AACCTCAAAG CAAGTGGGCGTAGCAT GACCTGCAGG chr2:9630880-9631380 + 54 9.37e-06 GGAAGGGGGC GAGGGGGGCGGAGCGG GAGGGAACGC chr17:28728486-28728986 + 67 9.37e-06 GGCGGGGCCC AGAGTGGGTGGGTCCG CGCACGCGCC chr19:40798656-40799156 - 70 1.10e-05 GCCGGGTCTG GGAGGGGGCGTTTCTT GCATGTTGGA chr1:151282155-151282655 - 71 1.10e-05 CCGCCCCCCC CAAGGGGGCGGAGCCA AGGGCGGGTA chr16:11742625-11743125 - 76 1.10e-05 ACTCCGTGA GCGGTGGGCGGAGCTG CGTGCTCTGG chr10:130110560-13011106 - 64 1.10e-05 GCCTTGTGCG GAAGGGGGCGTGGTGC GCGGGCCTCG chr8:94719611-94720111 + 53 1.29e-05 GGCGACACCG GAGGGGGGTGGGTCAG GAAGTGGGGG chr2:197499753-197500253 - 27 1.29e-05 TGCGCGGGTA GGGAGGGGCGGGGCTC GCGCGCAGGG chr17:64975383-64975883 - 21 1.29e-05 GGGCGTGGCG CCAGTGGGCGTGGCGT AGTGCGAAGA chr19:43754470-43754970 + 44 1.51e-05 ACGGGAGTCG GGTGGGGGCGGGGAGG CTGACCCAAG chr1:108746419-108746919 + 4 1.51e-05 GCT AGAGGGGGTGGGGCAT TCCCCTGCAG chr6:17706121-17706621 - 27 1.51e-05 CGGAGGAGTC GGAGGGGGCGGTGGCG GCAAGATCCG chr2:222656119-222656619 + 73 1.51e-05 GGACGCCCAC CAGGTGGGCGGGGCGA GAGTGGGGCG chr4:731282-731782 + 35 1.51e-05 TGTCCCCTCG TGGGTGGGCGTGGCCC TCAGGGGTGT chr18:24397732-24398232 - 2 1.51e-05 GCAGGGGCGG GGAGTGGGCGGGGAAC G chr19:36114733-36115233 + 17 1.75e-05 TGCTTCGCCA AAAGAGGGCGGAGCTG CGCACACGTG chr17:47971116-47971616 - 10 1.75e-05 ACACGGTGAG GAGGGGGGCGTGAGCG CGGAGAGAG chr17:78140317-78140817 + 14 1.75e-05 CTCAGGGTGC GTTGGGGGCGGGGCCC TTGGAGGTCG chr17:35141972-35142472 - 57 1.75e-05 GGTGTGCGTG GATGGGGGCGGGGGGC GTCGCCGCGG chr1:84690570-84691070 - 17 1.75e-05 GCAGGCGTCA GAAGGGGGCGGGGAGC AGAAAACGGC chr12:1907471-1907971 + 27 2.02e-05 GTGGGTGTGC CTGGTGGGCGTGTCTG GTGGACGGCC chr11:69376929-69377429 - 31 2.02e-05 ACTGCATTCA CGGGTGGGCGTGTGCG TTCACAGGTG chr14:105562657-10556315 + 40 2.02e-05 tgtgtgaggg tgagtgggtgtgtcgg tgtgagggtg chr4:88456812-88457312 + 77 2.02e-05 CAAACAGCAC GTGGGGGGCGTGGCGT CCCGGCAG chr5:56123720-56124220 + 55 2.02e-05 AGCAGAGACA AGAGTGGGCGGATGTG GTGGCCGCTG chr5:134371102-134371602 - 65 2.33e-05 TGCTGGGGGA GGAGGGGGCGGGACGC GGGAGCGCGC chr1:26432023-26432523 + 45 2.33e-05 TTTGGGTGAC GGAAGGGGCGTGTCGC AGCGCCCAAA chr12:121839367-12183986 + 26 2.33e-05 GGGCGTGGTC AGTGTGGGCGGAGCCT TGGGGGCCGA chr1:35031536-35032036 - 45 2.33e-05 GGCCGCAGTG GTAGTGGGCGGGACGG CGGGGCGGAG chr7:129952765-129953265 + 27 2.33e-05 GTGACGTCAT CGGAGGGGCGGGTCTG GTCGCTGAGA chr1:228139855-228140355 + 76 2.33e-05 GGCCAGCGCA GGTGGAGGCGGGGCTA GCGAGGCAC chr19:43463557-43464057 + 40 2.33e-05 GGCGGGATTA GCTGTGGGCGTGGTCT CAGATGGGGC chr6:166956332-166956832 - 57 2.33e-05 GGCGTGCCGT CCTGGGGGCGTGGCTC TCTGCTCCGG chr19:49877117-49877617 + 78 2.33e-05 TATGGAGAAG GAAGTGGGCGTTTCAA GGCGTGC chr12:50167250-50167750 - 79 2.33e-05 GGCTCG GGAAGGGGCGTGGATC CCCGGAGGCG chr17:60392016-60392516 - 12 2.33e-05 GGAGCTGGCG GGAGGGGGCGGAAGTG GCAAGAGGGC chr19:37906611-37907111 - 9 2.33e-05 GACCCCCAGC GGAGGGGGCGGTGGAG GAGGGCGT chr5:177497415-177497915 - 60 2.33e-05 CGGAGAAAGT CTAGTGGGCGTGGTCG CGACGAGGGC chr19:50384041-50384541 + 44 2.33e-05 CACTTGGGCA GGCGGGGGCGTGGCCC GTCTCTGAGC chr19:43475186-43475686 + 24 2.67e-05 GCGGGGCCAC TCAGGGGGCGTGGTTT TCGTCAGCGG chr19:17202251-17202751 - 44 2.67e-05 TGTGGCATGT CAGGTGGGTGTGGCAT AAGTGATCAT chr19:45467669-45468169 + 76 2.67e-05 GTGACGTAAG CAGGGGGGCGGGTCCC GGGCATATA chrX:1452822-1453322 - 66 2.67e-05 AATGGGGCGT GACATGGGCGTGGCCT GGTGGAGAGG chr8:18083983-18084483 + 15 2.67e-05 GGGAACGCTC GGAGGAGGCGGGACTG GGAGGAGAGG chr19:2335256-2335756 - 22 2.67e-05 ATGCAGTGGG AAAGGAGGCGGGGCCT GAAGGATGCA chr19:8592368-8592868 + 6 2.67e-05 CATAG ACGGTGGGCGTGGCCA ACGCGGGAAG chr17:7281274-7281774 + 82 2.67e-05 GCCAGCCACG CGGAGGGGCGTGGCCT CAT chr6:170160306-170160806 + 80 2.67e-05 GGGCGGCCCT TCTGGGGGCGTGGCCA GGCAG chr12:57752241-57752741 + 34 3.05e-05 GCGAAGAGTG TAAGGGGGCGGAGGGG CGATGGCAGC chr5:180594723-180595223 + 85 3.05e-05 tgtgggtgtg tatgtgggtgtgtgtg chr10:72625844-72626344 - 55 3.05e-05 GAGTCACGTG AGAGTGGGCGGAGGGG GTGGAGGTTT chr14:106348922-10634942 - 6 3.05e-05 GAGCAGGTGC AGGGAGGGCGGGGCTT CCTCA chr19:8525510-8526010 - 57 3.05e-05 GGAGTGACCT AAAGTGGGCGGGCCCA AAGAGCAAGG chr19:3434972-3435472 + 47 3.05e-05 TAGGGCTGGT GGCGGGGGCGGAGCCG GCCTTCCGGT chr18:80033805-80034305 - 41 3.05e-05 AGGCGAACGG CGAGTGGGCGGGGTGA AGACCGACGC chr11:133738487-13373898 + 39 3.05e-05 agggtgtgtg tatgtgggtgtgtgtg ggtgtgtgta chr19:49363383-49363883 + 75 3.48e-05 GAGGTCAACT GACGTGGGCGTGGTCT GACTGTGTGG chr15:42920675-42921175 + 68 3.48e-05 TGCCTATCAC GAAGGGGGCGGAGAGT CGGGCAGAAA chr16:1342797-1343297 + 21 3.48e-05 GGCCGTGCTG TGAGTGGGTGGAGCTA CGAGTGGGCG chr6:69796801-69797301 + 57 3.48e-05 CGGCGAGCCG AGCGGGGGCGGGGCAG CAAGGACTGC chr1:46132500-46133000 - 46 3.48e-05 GGGACGGCGT GGAAGGGGCGGTGGTG ATGCCTGCTG chr12:116910645-11691114 + 41 3.95e-05 CAGGGGCAGC GCCGGGGGCGTGGCGG GGGCGTGGAC chr16:2603106-2603606 + 80 3.95e-05 CAAGGGCTGA CCAGTGGGCGGGACAG AACGC chr14:106872513-10687301 - 47 3.95e-05 GCAGGGAGGC GGAGGGGGCGGGCGCA GGTGCCGCTC chr12:132303820-13230432 - 18 3.95e-05 GGTGTGCCCG GGTGAGGGTGTGTCCG GGCGAGGGTG chr3:194352476-194352976 + 43 3.95e-05 aaatgtgtgg taagtgggtgtgagtg tgcagtgagt chr6:79078126-79078626 - 20 3.95e-05 TTTTTTAGCG CCGGGGGGCGGGGGCG CGGGCCAGAG chr1:231528340-231528840 + 55 3.95e-05 CTTGGACCAC GCGGTGGGCGGAGCCA GCGGCGACGG chr15:83206993-83207493 + 65 3.95e-05 GGCGATGGGG AAAGGGGGCGGGCGCG CCATCATGAA chr21:44810816-44811316 - 9 4.46e-05 TGCGTGTGTG TATGTGGGTGTGTGCG TGTGTGCA chr19:36604694-36605194 - 4 4.46e-05 GTGATGGTCC CGGGGGGGCGGGGGGT GTG chr22:41468738-41469238 - 51 4.46e-05 CCCTGTGAAC GCAATGGGCGGAGCTC ACGTGCAACG chr21:46635658-46636158 - 7 4.46e-05 GGAGGTCCCA AAAGGGGGCGGAGGCC TCTGTC chr6:34888938-34889438 + 67 4.46e-05 GCTAGGTGAG CTAgggggcggggcgc gggggcgcgg chr16:740917-741417 - 17 4.46e-05 GGGTTCCCGC GAGGTGGGCGGGGAGC CGCAGCGCCG chr17:40476138-40476638 + 23 4.46e-05 CACATAGCAG TAGAGGGGCgtgtgtg tgtgtgtgtg chr15:68277456-68277956 - 79 4.46e-05 CCGGGA GGAGAGGGCGGGAGCG GGAGGGACGC chr16:28924634-28925134 - 19 5.03e-05 GCGCGGCCAC TAGGAGGGCGGGGCCA GGTGGGACCG chr1:202204265-202204765 - 61 5.03e-05 GTGTGTGTTT GAAGGAGGTGTGTGTG TTTGGAGGTG chr16:31179764-31180264 + 64 5.03e-05 CCTGCCCTAC GAAGGGGGCGGAGTGC GTTCCTGCCT chr1:212791572-212792072 + 3 5.03e-05 GA ACTGTGGGCGGGGCAC TCTGGGAGCG chr7:100081507-100082007 - 79 5.03e-05 ACAGAA CAAGTGGGCGTTGGGG GTACGGGTGA chr10:132752267-13275276 + 38 5.65e-05 GGGTGCAGTG TGGAGGGGCGTGGCGT GGAGGAGGTG chr5:103119977-103120477 + 84 5.65e-05 CGTGAGACCC GAGGAGGGCGGGGAAG A chr19:40284971-40285471 - 48 5.65e-05 GCGCAGCGTG GCGATGGGCGGGGGTA GAGCCCCGCC chr4:4673001-4673501 - 64 5.65e-05 CCTGGAATGG GAGAGGGGCGTGGTCC TGAGGGGAGG chr17:82223968-82224468 - 37 5.65e-05 TCTGCACGGG TGTAGGGGTGTGTCTG CACAGGTGTC chr1:226978484-226978984 - 60 5.65e-05 ATGCGGGTGT GAGGTGGGTGTGTAAG GAGGTGTGCA chr20:38446409-38446909 - 46 5.65e-05 CGGAAATACG GCTGGGGGCGCGGCTG CAGCCTAGAG chr5:138337319-138337819 + 29 5.65e-05 CTGCTGGGGG GGAGGGGGCGGAGAGA GAAGAGAGGG chr12:12611654-12612154 - 4 6.33e-05 CCGAGACCGG AGGGTGGGCGGGAGCG CTG chr10:5889817-5890317 - 42 6.33e-05 ATGCGCAATC GGTGGGGGCGCGGCCA CAGCTACCGG chr9:85743204-85743704 - 76 6.33e-05 GTCACATTC CCAGGGGGTGGGGGAG TAGCTCTAAG chr1:228438217-228438717 - 66 6.33e-05 GGCACCCTTC AGAGAGGGTGTGGCAT CATCTGGGGA chr1:232950442-232950942 - 52 6.33e-05 CCGGGCCATA CTGGTGGGCGGGGGTA GGGGTTGCGG chr1:8878533-8879033 - 17 6.33e-05 GAGGCGGAGC TGAGGGGGCGTGCCCC GGAGGCGGGA chr7:1718963-1719463 - 7 6.33e-05 TTGGGTCCTG TTGGTGGGCGGGGCCC TGTTGG chr5:173056941-173057441 + 74 6.33e-05 GACTTCTGCA CCAATGGGCGTGGGGG AGGCGGTGCC chr17:42181064-42181564 + 70 6.33e-05 GAGGCCTGAA ATGATGGGCGGGGCTT GAATAACAGA chr5:145835119-145835619 + 31 7.08e-05 CTCGGACAGC CACATGGGCGTGGCCT TTTTCCTCCG chr19:2945134-2945634 + 47 7.08e-05 CGGAGTCCTG CGTGGGGGCGGGACCC GCGTGCGTGA chr19:42133025-42133525 + 48 7.08e-05 AGCCAATGGG CCGGAGGGCGGGGCCG GCTGCGGAGA chr12:389106-389606 - 18 7.08e-05 TCCGTTTCCT GCAGGGGGCGGAGGGA TTTGACAGCA chr15:67049338-67049838 - 43 7.08e-05 CATGCCTGAG AGAGTGGGTGTGTAAG CCTTTGGGAA chr6:28764044-28764544 - 72 7.08e-05 CTTCATTTGT AAAGTGGGCGTATTTC CTAATGCCTA chr15:67521623-67522123 + 6 7.08e-05 GCCTA GGGAGGGGCGGGTCGC CCTCCTGTCC chr16:2682219-2682719 + 44 7.88e-05 CCAGGGCGGA CCTGTGGGCGGGACAG AACTCAGAGG chr17:21235874-21236374 - 36 7.88e-05 GGTGAATCAG TGGATGGGTGTGGGTG GATGGATGGC chr19:42325345-42325845 - 24 7.88e-05 TGTGGGAGGG CGAGGGGGCGGGAGCC GAGCAGCCGC chr6:149963608-149964108 + 18 7.88e-05 GCCACCAAGC CGCGGGGGCGGGTCGG AGGGGAGAGT chr10:102420852-10242135 + 2 7.88e-05 C CAAGGAGGCGGGTTTG GTGCGGCCAC chr19:7394768-7395268 - 75 7.88e-05 GCGTGACCCG GAAGGAGGCGTGCCCT CGAGGGCGGG chr1:175023211-175023711 + 59 7.88e-05 AGCGCAGGAC ACGAGGGGCGGGGCCT GGGCCGCCTG chr17:45148340-45148840 + 38 8.76e-05 gaggaaaaga ggaggaggcggaggag aactgagcag chr9:135967577-135968077 + 50 8.76e-05 CGCGCGCCtg tgtgtgggcgtgttgt gtgcatgtgt chr4:105708457-105708957 + 81 9.71e-05 AGGTTCCCAC AGTAGGGGCGGGGGAA ACGT chr3:41199151-41199651 - 44 9.71e-05 CCGCGCGAGG ACAAGGGGCGGGGCGC GAGGGGGCGG chrX:15675361-15675861 + 84 9.71e-05 AATGGGGACT GATAGGGGCGTAACCT G chr15:89334783-89335283 + 34 9.71e-05 CCCGAGCTAG CTGGTGGGCGGAGGTG ACGTTTTTAT chr19:38975200-38975700 - 64 9.71e-05 AGGCCCTGCC CGGAGGGGCGGGTCCC TGGGAGTCCC chr12:2004286-2004786 - 76 9.71e-05 GTCGGCGGG CAGGAGGGTGGGGGTG ACTGGAGCCG chr1:241998455-241998955 - 75 1.07e-04 CGCTGGGGGG CGTGGGGGTGGGGTTC CGATCCTGTT chr2:74454791-74455291 + 66 1.07e-04 TCCGCGGGGC GGAAAAGGCGTGTCTG CGTGTGTCCC chr19:12840495-12840995 + 31 1.07e-04 GGCGGAGACT CAGGTGGGCGGAGACT CAGGTGGGAC chr1:26692821-26693321 - 11 1.07e-04 AGCAGCCAAG GAAGGGGGCAGGGCTG CCAGGACAAA chr6:13614996-13615496 - 20 1.07e-04 GCGCGAAGGG AGGAAGGGCGTGGCCT GTAGGCAGTG chr9:129496552-129497052 - 17 1.07e-04 CGGACTGCGC GAAAGGGGCGGACCGG CTCCCTGCAG chr19:38335508-38336008 + 41 1.18e-04 GACCGCGTGA GAGGAGGGCGTGCCTC TGCAAAGGCG chr9:128786930-128787430 + 57 1.18e-04 GTGACTGGCG GGGCGGGGCGGGGCTG AGGCGGTGGA chr19:38388015-38388515 - 59 1.18e-04 GCGTGCGTCA CGAAGGGGCGGGCCCA CGGTGGATGG chr16:68244974-68245474 + 70 1.18e-04 ACCTCCGACT GGGAGGGGCGTATATG GCGGCGAGTC chr5:116574640-116575140 - 58 1.18e-04 GACGCCAGCC AAAGTAGGCGGAGTTG CGGAAGGAGA chr17:68457513-68458013 + 40 1.18e-04 ATCCGTGGCA GCTGTGGGCGGACCCG CCCGGCTGGC chr1:155050347-155050847 - 47 1.18e-04 GCGCTGTTGG GAGGTGGGCGTTAGCG CCAGCCCGGG chr22:35840392-35840892 + 23 1.18e-04 TGTGCGCACG Cgtgtgtgcgtgtgtg cgtgtgtgtg chr19:38224126-38224626 - 61 1.18e-04 TATGTGGACG AGTGAGGGCGGGTGAG TGACGGTGCG chr19:8240350-8240850 + 33 1.30e-04 TCAATGTATG CAAgtgtgtgtgtgtg tgtgtgtgtg chr1:29230706-29231206 - 65 1.30e-04 CACCCGGCGG GGCAGGGGCGGGGCGC AGGCGCGCGG chr4:4541842-4542342 - 15 1.30e-04 GCCGTTGCCG GGGGGAGGCGTGTGGG GCAGGACCAG chr19:37594932-37595432 + 75 1.30e-04 GCCAtgtgtg tgtgtgtgcgtgtgtg tgtgggtctg chr20:38356210-38356710 - 31 1.30e-04 TACAGACGAG GGTGTGTGTGTGTGTG TGTGTGTGTG chr1:154558621-154559121 - 25 1.43e-04 CAGGCGAGAA CAGGGGGGCGGGAAAG ACGGAGAGAT chr5:141618903-141619403 + 30 1.43e-04 TGGGGGAAGG GAGAGGGGCGGAGGGA AGCCGCGGAA chr6:35342188-35342688 + 35 1.43e-04 GGGGCAGCGT GCGGTGGGCGGAGAGG CAGAATTAGG chr1:31815820-31816320 + 36 1.43e-04 CTTGCTGAGG GATAGGGGCGGAGTCC CTGATGATGA chr22:41446660-41447160 + 24 1.43e-04 CCCTCCGCCC TGCAGGGGCGGGGCCA GGGCCCGGCC chr1:243256039-243256539 + 48 1.43e-04 TGCCCAGGGC CTAGTGGGCGGGAGCA GACCAGGTGC chr18:50281843-50282343 + 85 1.43e-04 GGGCTTGTGG GGAAAAGGCGGGGCCT chr1:202205553-202206053 - 23 1.43e-04 ATGTTTGAAG GAGGTGTGCGTATGTG TTTGGAGGTG chr12:96035718-96036218 + 40 1.57e-04 GTTTGCATAT AGCGAGGGCGGGGCGG AGCAAAAACG chr12:6937930-6938430 + 33 1.57e-04 GGGCTGTGGC TGGGTGGGCGGGCGAG TCACGTCGCC chr15:78750948-78751448 - 11 1.57e-04 GCGGTGCCAG GGAAGGGGCGGGCACT CGCCAGAGCC chr17:39154318-39154818 + 84 1.57e-04 ATTTCTATGG AATAGGGGTGTGGTCT T chr17:80980358-80980858 + 72 1.71e-04 agtgtgtgag tgagtgtgtgtgtgtg agtgtgtgtg chr19:40576639-40577139 + 25 1.71e-04 TGCACACCCG GAAGTGGGTGCGGGCC AGCCGGCTCG chr16:22296930-22297430 + 58 1.71e-04 ctccagtctc ttcgggggcgtgggtt cgaatcccac chr16:4253819-4254319 - 14 1.71e-04 AGAGGCGTGG CTTGGGGGCGGGCCAG GGGAATCCCA chr1:111592701-111593201 + 60 1.71e-04 GCTCTGAGGA TCAGTGGGTGTGTTGG GGGGTAAATA chr10:123008529-12300902 - 78 1.71e-04 AGCAAGG CAGGGGGGCGGGAAGG GAGTCGGAGA chr14:103520893-10352139 - 83 1.71e-04 CT CGCGGGGGTGGGGCCC CTCGCGGCGA chr4:3074159-3074659 - 2 1.87e-04 GACGAGGAAG GGACGGGGCGGGACTG C chr20:62500147-62500647 + 38 1.87e-04 CGTGGGTGTG CGGGAGGGCGGGGGGA GGGTGTGAGC chr14:91060388-91060888 - 58 1.87e-04 CGGCGGTGGA GCAGGGGGCGGTTTGG TTGCGCGGTA chr12:54207673-54208173 - 56 1.87e-04 GTGACCTCCA GGAAGGGGTGTGCGCT CACCTGGCCC chr7:1115617-1116117 - 77 2.04e-04 TGTCATCC TGCGTGGGCGTTGGTG ATGGAAGCCG chr3:194672340-194672840 + 52 2.04e-04 GTGGCGCTGG GACGGGGGCGTTTCCC AGCGCTGGTT chr1:228109140-228109640 + 10 2.21e-04 GGAGAGGCA AGAGTGGGCGGTGAGA CACGAAGATA chr1:228173819-228174319 + 9 2.21e-04 CTCGCATT GCTGTGGGCGCGGCAC TCTGCGCTGG chr20:3710824-3711324 + 81 2.21e-04 GGGTCCCGGG AAAGGGGGCGGTGTGC CAGC chr15:67254496-67254996 - 54 2.40e-04 CGGAAGGGGG TCTAGGGGCGGGGTCA GGCCAGCCTG chr7:876170-876670 - 48 2.40e-04 CAACACGTGA CCCAGGGGCGGGTCCG CAGGCAACAC chr16:31032947-31033447 + 9 2.40e-04 GCGGGGGC CGTGTGGGCGTCGCTC GGTCGTTGGG chr1:226977817-226978317 - 76 2.40e-04 GGGGTGTGT GACGTGTGCGGGTGTT CGGTGGGTGT chr11:78188306-78188806 - 54 2.40e-04 GCGAGGGCAG GAGGTGGGTGCGGCAC GGCCGGGGTC chr19:2168818-2169318 + 30 2.40e-04 TGACTCACAG GCTGTGGGCGGGCAGG GGCGGCCTCC chr17:20155659-20156159 + 40 2.40e-04 GTATGCAGAT GACGGGGGCGGGCCGC GCCTGGCGGG chr10:101830475-10183097 - 21 2.60e-04 GGCCTGCGTG CGTGTGTGTGTGTGTG TGTGTGTGTG chr20:45891023-45891523 - 16 2.60e-04 CCCTACGGAC CTGGGGGGCGGTGGCG GTCAATGCCG chr20:1118287-1118787 - 10 2.60e-04 CAGGGAGTGC GAGCGGGGCGTGGCCC CTCAAAGCC chr17:7329417-7329917 - 53 2.60e-04 ACCGCCCCCT AGCGAGGGCGGGGTCG TCGGTGCCGC chr19:39390668-39391168 + 51 2.81e-04 AAGGGGGACG CAGAGGGGCGTGCCGA CTTCAGGGGA chr5:1950692-1951192 + 14 2.81e-04 TGTGTCGTCT GCTGTGGGCGCGTGAG TCATCTGCTC chr16:30923113-30923613 - 16 2.81e-04 AAACAGGACG GCGGAGGGCGTGCCCA GCCGGGAGCC chr19:40690716-40691216 - 69 2.81e-04 CGGGAAGATT TGGGGGTGTGGGGCGG CAAGGCGCCT chr22:31159887-31160387 + 75 2.81e-04 AAGTCCCTCC GAGAGGGGCGGCTCCG CGTCATGTGA chr16:71845672-71846172 + 78 2.81e-04 ATCTCTCCGC GCCGGGGGCGGGACGA GCTTGAC chr1:27489206-27489706 - 49 2.81e-04 TGTGTGTGTG TGTGTGTGTGTGTGTG TACGTACCAT chr14:103921400-10392190 + 82 2.81e-04 GAGAGGGTGC GTTAGGGGTGTGCCCG CGT chr5:181223217-181223717 + 16 2.81e-04 GCGGGGGATG GGGGTAGGCGGTTCCT CTGTTCTTTC chr19:17334710-17335210 - 48 2.81e-04 AGCAGGGAGC GAGGTAGGCGGGCGAG AAGGAAACCC chr19:37594313-37594813 - 7 3.03e-04 TTCTGGCAGT GGCGGGGGTGTGGTGC TGCTAG chr5:176388744-176389244 + 31 3.03e-04 TACCCATAGG TAAGTGGGTGCGGTAG GAACTGCACA chr16:3400906-3401406 + 67 3.03e-04 TCCTCAGCAG CTAGTGGGCGTCTCCG CAGCGAGTGG chr15:76905024-76905524 - 49 3.03e-04 GTGAGTGTCC GCGAGGGGCGTGCGTA GCGCAGACCC chr6:26188908-26189408 + 66 3.03e-04 AAACCTCATG AGAAGGGGCGGGAACC ACAGTCAGTT chr19:35612525-35613025 + 38 3.03e-04 TGAAGAGGCT GAGGGAGGCGGTGTCG CCGCCGCGGC chr12:6662702-6663202 - 15 3.03e-04 AGGAAATATT GGAGGGTGCGGAGAAA GAGGGGGCGG chr5:10353624-10354124 - 53 3.03e-04 CCATCTTGTC TGGGGGGGCGGCGGTG ACGCAGCCAC chrX:73944015-73944515 - 79 3.27e-04 AAGCCG GGGGTGGGCGTCACAG CCAAACAGGC chr12:49060548-49061048 - 51 3.27e-04 GCCTTTCCTC CGAGAGGGCGGGATCC CTCCGCCGCT chr19:33176937-33177437 + 64 3.27e-04 TGCCCGATAC TATGAGGGTGTGAGCG GGATCCCGAG chr8:11016341-11016841 + 75 3.27e-04 CGGGCCCTCG GTAGGGGGCGTTCCAA GGCCCCGCCT chr8:630783-631283 - 57 3.27e-04 CAGCTCTGTC AATGTGGGTGGTGGGT GGTCACGGGA chr19:12669253-12669753 + 12 3.27e-04 CGGCGTGCAA GCTGAGGGCGGATTTT AGAGTAACAC chr7:101165324-101165824 - 52 3.52e-04 TTTATAAGGC GGTGGAGGCGCGGGCG CTGTCCAGCG chr17:3846115-3846615 - 43 3.52e-04 TCTCCCGCCA CCAGGGGGCGGCGGCG CTAAGGGCGG chr19:41310148-41310648 + 37 3.78e-04 GCAGGCGGCG GGTGGGTGCGGTTGCG GTGTCTCTAG chr6:157323332-157323832 - 44 3.78e-04 AGATTGCACA GGAGGAGGCGGTAGCG GAACCTTTCT chr15:49046302-49046802 + 41 3.78e-04 GCCCGAATGG GCTGGAGGCGTAGTTA GAAATGGAGG chr11:57741104-57741604 + 42 3.78e-04 TCCACCCGAA GCGATGGGTGGTTCCG TCAGGCGCTT chr20:1466681-1467181 - 69 4.05e-04 GTGAGGCACC GCGTGGGGCGGGGCTG CGGGCGGGCT chr1:226186639-226187139 - 63 4.05e-04 ATCCGAAAGG ATGGGGTGCGGGGGAG GGGAGTTCGG chr12:121352303-12135280 + 35 4.05e-04 TCAGAATGTA CAAGAGTGCGGGGAGG GGTGCACCAA chr19:44025270-44025770 + 12 4.05e-04 AGCAGAGGTT TGGAGGGGCGCGGGCG GGGATTGCCG chr14:22982550-22983050 + 78 4.34e-04 TTGGAATAGG AAAGAGTGTGGGGGTA GGGGACG chr5:111091980-111092480 - 70 4.34e-04 CAGAGCTCAC ATGGGAGGCGTGACTT GGGTTCCGAG chr17:993473-993973 - 28 4.34e-04 GGATTATGTG AGGGTGGGTGGATTAT GCGAGGTGGA chr15:101295097-10129559 - 32 4.64e-04 CAAGAACGCC CCCGGAGGCGTGGCTC TTCGATTGCT chr1:234373452-234373952 + 8 4.64e-04 GAAGCCG GACGTGGGCGGGCAGA GAGGTCGGCT chr6:33571110-33571610 + 54 4.64e-04 CCCAGAGGCT GGAGTGGGTGCGCCCC AAAGGCCCCG chr14:102591975-10259247 + 73 4.64e-04 GCCAGAGGCT gcgggaggcgtgcgcg ggcagcaagg chr8:25458845-25459345 + 75 4.96e-04 GGGAGCGCTC GGAGTGTGCGCGGACT GGAGAAGGGG chr1:36464186-36464686 + 66 5.29e-04 ATGACGCAAC GCACGGGGCGGAGCTC AGAGACCGGG chr20:327049-327549 - 52 5.64e-04 AGGGAGGGGC GCAGGAGGCGCGTGCG TTGCCACCCG chr15:82540307-82540807 + 60 6.00e-04 GGCGGAGTGG AGCGGGGGCGGCGGTG GCGCGCCCCT chr9:128947493-128947993 + 54 6.00e-04 CGGGCCGTGT GTGAGGTGCGGAGCGG GTCGAATGGA chr9:133417969-133418469 + 83 6.37e-04 CTGGGGGGCC GCTGTGTGTGTAGCAC CT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GRRGKGGGCGKGGCBG MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr1:154973605-154974105 4.9e-08 28_[+1]_56 chr6:6686927-6687427 4.9e-08 50_[-1]_34 chr19:8922495-8922995 6.9e-08 9_[+1]_75 chr1:235504255-235504755 6.9e-08 6_[-1]_78 chr6:169840137-169840637 1e-07 12_[-1]_72 chr7:100852153-100852653 1e-07 37_[-1]_47 chr16:70800932-70801432 1e-07 76_[-1]_8 chr17:7435136-7435636 1.5e-07 69_[+1]_15 chr19:42302169-42302669 1.5e-07 9_[-1]_75 chr19:17293879-17294379 2.1e-07 82_[-1]_2 chr19:49867364-49867864 2.8e-07 60_[-1]_24 chr19:43533781-43534281 2.8e-07 60_[-1]_24 chr19:39125748-39126248 3.7e-07 41_[+1]_43 chr5:138352203-138352703 3.7e-07 48_[-1]_36 chr19:39480576-39481076 4.8e-07 44_[+1]_40 chr15:45200281-45200781 4.8e-07 56_[-1]_28 chr12:56152317-56152817 4.8e-07 72_[-1]_12 chr9:137423034-137423534 6.3e-07 76_[+1]_8 chr22:31661949-31662449 8e-07 79_[-1]_5 chr10:97687168-97687668 1e-06 32_[+1]_52 chr19:6161189-6161689 1e-06 75_[+1]_9 chrX:15737879-15738379 1.3e-06 4_[+1]_80 chr19:17075237-17075737 1.3e-06 31_[-1]_53 chr19:6677828-6678328 1.3e-06 59_[+1]_25 chr5:180494025-180494525 1.3e-06 17_[+1]_67 chr7:75914819-75915319 1.3e-06 54_[-1]_30 chr1:171741866-171742366 1.3e-06 33_[+1]_51 chr18:12377198-12377698 1.3e-06 83_[+1]_1 chr17:74776112-74776612 1.3e-06 61_[-1]_23 chr9:137156920-137157420 1.3e-06 4_[+1]_80 chr19:49580372-49580872 1.7e-06 19_[-1]_65 chr20:35771609-35772109 1.7e-06 50_[+1]_34 chr19:55624405-55624905 1.7e-06 72_[+1]_12 chr5:139403659-139404159 1.7e-06 20_[-1]_64 chr2:219552489-219552989 1.7e-06 56_[-1]_28 chr2:241881440-241881940 2.1e-06 37_[+1]_47 chr19:48321769-48322269 2.1e-06 45_[-1]_39 chr18:74495855-74496355 2.1e-06 15_[-1]_69 chr1:24744931-24745431 2.1e-06 28_[-1]_56 chr10:102743415-10274391 2.1e-06 48_[-1]_36 chr9:113401128-113401628 2.1e-06 66_[-1]_18 chr7:103074628-103075128 2.1e-06 28_[+1]_56 chr19:35869574-35870074 2.1e-06 33_[+1]_51 chr12:52023584-52024084 2.1e-06 42_[+1]_42 chr2:121076799-121077299 2.1e-06 82_[+1]_2 chr19:40570494-40570994 2.6e-06 39_[+1]_45 chr19:7871907-7872407 2.6e-06 24_[+1]_60 chr16:89142387-89142887 3.1e-06 16_[-1]_68 chr12:64759205-64759705 3.1e-06 73_[+1]_11 chr19:33521613-33522113 3.1e-06 31_[+1]_53 chr6:37819212-37819712 3.1e-06 30_[+1]_54 chr5:173331937-173332437 3.1e-06 9_[-1]_75 chr19:47428128-47428628 3.1e-06 80_[+1]_4 chr7:1011206-1011706 3.1e-06 55_[-1]_29 chr17:82273275-82273775 3.8e-06 5_[-1]_79 chr19:54417022-54417522 3.8e-06 44_[-1]_40 chr17:45161326-45161826 3.8e-06 38_[-1]_46 chr19:7870602-7871102 3.8e-06 33_[+1]_51 chr17:48830768-48831268 3.8e-06 6_[+1]_78 chr19:33080940-33081440 4.6e-06 26_[+1]_58 chr9:136342690-136343190 4.6e-06 57_[+1]_27 chr19:11346420-11346920 4.6e-06 78_[-1]_6 chr19:35903637-35904137 5.5e-06 75_[+1]_9 chr19:3573851-3574351 5.5e-06 61_[-1]_23 chr19:6767420-6767920 5.5e-06 12_[-1]_72 chr1:244864385-244864885 5.5e-06 52_[-1]_32 chr16:88882182-88882682 6.6e-06 15_[+1]_69 chr12:132305303-13230580 6.6e-06 70_[-1]_14 chr9:137022003-137022503 6.6e-06 1_[+1]_83 chr1:92080231-92080731 6.6e-06 59_[-1]_25 chr1:15246916-15247416 6.6e-06 59_[-1]_25 chr17:17206273-17206773 7.9e-06 78_[-1]_6 chr11:112961078-11296157 7.9e-06 38_[-1]_46 chr1:33181900-33182400 7.9e-06 64_[-1]_20 chr16:89008739-89009239 9.4e-06 35_[-1]_49 chr15:65868966-65869466 9.4e-06 8_[-1]_76 chr1:54715544-54716044 9.4e-06 23_[-1]_61 chr8:10839693-10840193 9.4e-06 38_[+1]_46 chr11:72223089-72223589 9.4e-06 43_[+1]_41 chr1:2586348-2586848 9.4e-06 79_[+1]_5 chr17:35947063-35947563 9.4e-06 53_[+1]_31 chr1:228130882-228131382 9.4e-06 10_[-1]_74 chr2:9630880-9631380 9.4e-06 53_[+1]_31 chr17:28728486-28728986 9.4e-06 66_[+1]_18 chr19:40798656-40799156 1.1e-05 69_[-1]_15 chr1:151282155-151282655 1.1e-05 70_[-1]_14 chr16:11742625-11743125 1.1e-05 75_[-1]_9 chr10:130110560-13011106 1.1e-05 63_[-1]_21 chr8:94719611-94720111 1.3e-05 52_[+1]_32 chr2:197499753-197500253 1.3e-05 26_[-1]_58 chr17:64975383-64975883 1.3e-05 20_[-1]_64 chr19:43754470-43754970 1.5e-05 43_[+1]_41 chr1:108746419-108746919 1.5e-05 3_[+1]_81 chr6:17706121-17706621 1.5e-05 26_[-1]_58 chr2:222656119-222656619 1.5e-05 72_[+1]_12 chr4:731282-731782 1.5e-05 34_[+1]_50 chr18:24397732-24398232 1.5e-05 1_[-1]_83 chr19:36114733-36115233 1.7e-05 16_[+1]_68 chr17:47971116-47971616 1.7e-05 9_[-1]_75 chr17:78140317-78140817 1.7e-05 13_[+1]_71 chr17:35141972-35142472 1.7e-05 56_[-1]_28 chr1:84690570-84691070 1.7e-05 16_[-1]_68 chr12:1907471-1907971 2e-05 26_[+1]_58 chr11:69376929-69377429 2e-05 30_[-1]_54 chr14:105562657-10556315 2e-05 39_[+1]_45 chr4:88456812-88457312 2e-05 76_[+1]_8 chr5:56123720-56124220 2e-05 54_[+1]_30 chr5:134371102-134371602 2.3e-05 64_[-1]_20 chr1:26432023-26432523 2.3e-05 44_[+1]_40 chr12:121839367-12183986 2.3e-05 25_[+1]_59 chr1:35031536-35032036 2.3e-05 44_[-1]_40 chr7:129952765-129953265 2.3e-05 26_[+1]_58 chr1:228139855-228140355 2.3e-05 75_[+1]_9 chr19:43463557-43464057 2.3e-05 39_[+1]_45 chr6:166956332-166956832 2.3e-05 56_[-1]_28 chr19:49877117-49877617 2.3e-05 77_[+1]_7 chr12:50167250-50167750 2.3e-05 78_[-1]_6 chr17:60392016-60392516 2.3e-05 11_[-1]_73 chr19:37906611-37907111 2.3e-05 8_[-1]_76 chr5:177497415-177497915 2.3e-05 59_[-1]_25 chr19:50384041-50384541 2.3e-05 43_[+1]_41 chr19:43475186-43475686 2.7e-05 23_[+1]_61 chr19:17202251-17202751 2.7e-05 43_[-1]_41 chr19:45467669-45468169 2.7e-05 75_[+1]_9 chrX:1452822-1453322 2.7e-05 65_[-1]_19 chr8:18083983-18084483 2.7e-05 14_[+1]_70 chr19:2335256-2335756 2.7e-05 21_[-1]_63 chr19:8592368-8592868 2.7e-05 5_[+1]_79 chr17:7281274-7281774 2.7e-05 81_[+1]_3 chr6:170160306-170160806 2.7e-05 79_[+1]_5 chr12:57752241-57752741 3.1e-05 33_[+1]_51 chr5:180594723-180595223 3.1e-05 84_[+1] chr10:72625844-72626344 3.1e-05 54_[-1]_30 chr14:106348922-10634942 3.1e-05 5_[-1]_79 chr19:8525510-8526010 3.1e-05 56_[-1]_28 chr19:3434972-3435472 3.1e-05 46_[+1]_38 chr18:80033805-80034305 3.1e-05 40_[-1]_44 chr11:133738487-13373898 3.1e-05 38_[+1]_46 chr19:49363383-49363883 3.5e-05 74_[+1]_10 chr15:42920675-42921175 3.5e-05 67_[+1]_17 chr16:1342797-1343297 3.5e-05 20_[+1]_64 chr6:69796801-69797301 3.5e-05 56_[+1]_28 chr1:46132500-46133000 3.5e-05 45_[-1]_39 chr12:116910645-11691114 3.9e-05 40_[+1]_44 chr16:2603106-2603606 3.9e-05 79_[+1]_5 chr14:106872513-10687301 3.9e-05 46_[-1]_38 chr12:132303820-13230432 3.9e-05 17_[-1]_67 chr3:194352476-194352976 3.9e-05 42_[+1]_42 chr6:79078126-79078626 3.9e-05 19_[-1]_65 chr1:231528340-231528840 3.9e-05 54_[+1]_30 chr15:83206993-83207493 3.9e-05 64_[+1]_20 chr21:44810816-44811316 4.5e-05 8_[-1]_76 chr19:36604694-36605194 4.5e-05 3_[-1]_81 chr22:41468738-41469238 4.5e-05 50_[-1]_34 chr21:46635658-46636158 4.5e-05 6_[-1]_78 chr6:34888938-34889438 4.5e-05 66_[+1]_18 chr16:740917-741417 4.5e-05 16_[-1]_68 chr17:40476138-40476638 4.5e-05 22_[+1]_62 chr15:68277456-68277956 4.5e-05 78_[-1]_6 chr16:28924634-28925134 5e-05 18_[-1]_66 chr1:202204265-202204765 5e-05 60_[-1]_24 chr16:31179764-31180264 5e-05 63_[+1]_21 chr1:212791572-212792072 5e-05 2_[+1]_82 chr7:100081507-100082007 5e-05 78_[-1]_6 chr10:132752267-13275276 5.7e-05 37_[+1]_47 chr5:103119977-103120477 5.7e-05 83_[+1]_1 chr19:40284971-40285471 5.7e-05 47_[-1]_37 chr4:4673001-4673501 5.7e-05 63_[-1]_21 chr17:82223968-82224468 5.7e-05 36_[-1]_48 chr1:226978484-226978984 5.7e-05 59_[-1]_25 chr20:38446409-38446909 5.7e-05 45_[-1]_39 chr5:138337319-138337819 5.7e-05 28_[+1]_56 chr12:12611654-12612154 6.3e-05 3_[-1]_81 chr10:5889817-5890317 6.3e-05 41_[-1]_43 chr9:85743204-85743704 6.3e-05 75_[-1]_9 chr1:228438217-228438717 6.3e-05 65_[-1]_19 chr1:232950442-232950942 6.3e-05 51_[-1]_33 chr1:8878533-8879033 6.3e-05 16_[-1]_68 chr7:1718963-1719463 6.3e-05 6_[-1]_78 chr5:173056941-173057441 6.3e-05 73_[+1]_11 chr17:42181064-42181564 6.3e-05 69_[+1]_15 chr5:145835119-145835619 7.1e-05 30_[+1]_54 chr19:2945134-2945634 7.1e-05 46_[+1]_38 chr19:42133025-42133525 7.1e-05 47_[+1]_37 chr12:389106-389606 7.1e-05 17_[-1]_67 chr15:67049338-67049838 7.1e-05 42_[-1]_42 chr6:28764044-28764544 7.1e-05 71_[-1]_13 chr15:67521623-67522123 7.1e-05 5_[+1]_79 chr16:2682219-2682719 7.9e-05 43_[+1]_41 chr17:21235874-21236374 7.9e-05 35_[-1]_49 chr19:42325345-42325845 7.9e-05 23_[-1]_61 chr6:149963608-149964108 7.9e-05 17_[+1]_67 chr10:102420852-10242135 7.9e-05 1_[+1]_83 chr19:7394768-7395268 7.9e-05 74_[-1]_10 chr1:175023211-175023711 7.9e-05 58_[+1]_26 chr17:45148340-45148840 8.8e-05 37_[+1]_47 chr9:135967577-135968077 8.8e-05 49_[+1]_35 chr4:105708457-105708957 9.7e-05 80_[+1]_4 chr3:41199151-41199651 9.7e-05 43_[-1]_41 chrX:15675361-15675861 9.7e-05 83_[+1]_1 chr15:89334783-89335283 9.7e-05 33_[+1]_51 chr19:38975200-38975700 9.7e-05 63_[-1]_21 chr12:2004286-2004786 9.7e-05 75_[-1]_9 chr1:241998455-241998955 0.00011 74_[-1]_10 chr2:74454791-74455291 0.00011 65_[+1]_19 chr19:12840495-12840995 0.00011 30_[+1]_54 chr1:26692821-26693321 0.00011 10_[-1]_74 chr6:13614996-13615496 0.00011 19_[-1]_65 chr9:129496552-129497052 0.00011 16_[-1]_68 chr19:38335508-38336008 0.00012 40_[+1]_44 chr9:128786930-128787430 0.00012 56_[+1]_28 chr19:38388015-38388515 0.00012 58_[-1]_26 chr16:68244974-68245474 0.00012 69_[+1]_15 chr5:116574640-116575140 0.00012 57_[-1]_27 chr17:68457513-68458013 0.00012 39_[+1]_45 chr1:155050347-155050847 0.00012 46_[-1]_38 chr22:35840392-35840892 0.00012 22_[+1]_62 chr19:38224126-38224626 0.00012 60_[-1]_24 chr19:8240350-8240850 0.00013 32_[+1]_52 chr1:29230706-29231206 0.00013 64_[-1]_20 chr4:4541842-4542342 0.00013 14_[-1]_70 chr19:37594932-37595432 0.00013 74_[+1]_10 chr20:38356210-38356710 0.00013 30_[-1]_54 chr1:154558621-154559121 0.00014 24_[-1]_60 chr5:141618903-141619403 0.00014 29_[+1]_55 chr6:35342188-35342688 0.00014 34_[+1]_50 chr1:31815820-31816320 0.00014 35_[+1]_49 chr22:41446660-41447160 0.00014 23_[+1]_61 chr1:243256039-243256539 0.00014 47_[+1]_37 chr18:50281843-50282343 0.00014 84_[+1] chr1:202205553-202206053 0.00014 22_[-1]_62 chr12:96035718-96036218 0.00016 39_[+1]_45 chr12:6937930-6938430 0.00016 32_[+1]_52 chr15:78750948-78751448 0.00016 10_[-1]_74 chr17:39154318-39154818 0.00016 83_[+1]_1 chr17:80980358-80980858 0.00017 71_[+1]_13 chr19:40576639-40577139 0.00017 24_[+1]_60 chr16:22296930-22297430 0.00017 57_[+1]_27 chr16:4253819-4254319 0.00017 13_[-1]_71 chr1:111592701-111593201 0.00017 59_[+1]_25 chr10:123008529-12300902 0.00017 77_[-1]_7 chr14:103520893-10352139 0.00017 82_[-1]_2 chr4:3074159-3074659 0.00019 1_[-1]_83 chr20:62500147-62500647 0.00019 37_[+1]_47 chr14:91060388-91060888 0.00019 57_[-1]_27 chr12:54207673-54208173 0.00019 55_[-1]_29 chr7:1115617-1116117 0.0002 76_[-1]_8 chr3:194672340-194672840 0.0002 51_[+1]_33 chr1:228109140-228109640 0.00022 9_[+1]_75 chr1:228173819-228174319 0.00022 8_[+1]_76 chr20:3710824-3711324 0.00022 80_[+1]_4 chr15:67254496-67254996 0.00024 53_[-1]_31 chr7:876170-876670 0.00024 47_[-1]_37 chr16:31032947-31033447 0.00024 8_[+1]_76 chr1:226977817-226978317 0.00024 75_[-1]_9 chr11:78188306-78188806 0.00024 53_[-1]_31 chr19:2168818-2169318 0.00024 29_[+1]_55 chr17:20155659-20156159 0.00024 39_[+1]_45 chr10:101830475-10183097 0.00026 20_[-1]_64 chr20:45891023-45891523 0.00026 15_[-1]_69 chr20:1118287-1118787 0.00026 9_[-1]_75 chr17:7329417-7329917 0.00026 52_[-1]_32 chr19:39390668-39391168 0.00028 50_[+1]_34 chr5:1950692-1951192 0.00028 13_[+1]_71 chr16:30923113-30923613 0.00028 15_[-1]_69 chr19:40690716-40691216 0.00028 68_[-1]_16 chr22:31159887-31160387 0.00028 74_[+1]_10 chr16:71845672-71846172 0.00028 77_[+1]_7 chr1:27489206-27489706 0.00028 48_[-1]_36 chr14:103921400-10392190 0.00028 81_[+1]_3 chr5:181223217-181223717 0.00028 15_[+1]_69 chr19:17334710-17335210 0.00028 47_[-1]_37 chr19:37594313-37594813 0.0003 6_[-1]_78 chr5:176388744-176389244 0.0003 30_[+1]_54 chr16:3400906-3401406 0.0003 66_[+1]_18 chr15:76905024-76905524 0.0003 48_[-1]_36 chr6:26188908-26189408 0.0003 65_[+1]_19 chr19:35612525-35613025 0.0003 37_[+1]_47 chr12:6662702-6663202 0.0003 14_[-1]_70 chr5:10353624-10354124 0.0003 52_[-1]_32 chrX:73944015-73944515 0.00033 78_[-1]_6 chr12:49060548-49061048 0.00033 50_[-1]_34 chr19:33176937-33177437 0.00033 63_[+1]_21 chr8:11016341-11016841 0.00033 74_[+1]_10 chr8:630783-631283 0.00033 56_[-1]_28 chr19:12669253-12669753 0.00033 11_[+1]_73 chr7:101165324-101165824 0.00035 51_[-1]_33 chr17:3846115-3846615 0.00035 42_[-1]_42 chr19:41310148-41310648 0.00038 36_[+1]_48 chr6:157323332-157323832 0.00038 43_[-1]_41 chr15:49046302-49046802 0.00038 40_[+1]_44 chr11:57741104-57741604 0.00038 41_[+1]_43 chr20:1466681-1467181 0.00041 68_[-1]_16 chr1:226186639-226187139 0.00041 62_[-1]_22 chr12:121352303-12135280 0.00041 34_[+1]_50 chr19:44025270-44025770 0.00041 11_[+1]_73 chr14:22982550-22983050 0.00043 77_[+1]_7 chr5:111091980-111092480 0.00043 69_[-1]_15 chr17:993473-993973 0.00043 27_[-1]_57 chr15:101295097-10129559 0.00046 31_[-1]_53 chr1:234373452-234373952 0.00046 7_[+1]_77 chr6:33571110-33571610 0.00046 53_[+1]_31 chr14:102591975-10259247 0.00046 72_[+1]_12 chr8:25458845-25459345 0.0005 74_[+1]_10 chr1:36464186-36464686 0.00053 65_[+1]_19 chr20:327049-327549 0.00056 51_[-1]_33 chr15:82540307-82540807 0.0006 59_[+1]_25 chr9:128947493-128947993 0.0006 53_[+1]_31 chr9:133417969-133418469 0.00064 82_[+1]_2 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GRRGKGGGCGKGGCBG MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF GRRGKGGGCGKGGCBG width=16 seqs=309 chr1:154973605-154974105 ( 29) GGAGGGGGCGTGGCTT 1 chr6:6686927-6687427 ( 51) GGAGTGGGCGGGGCTT 1 chr19:8922495-8922995 ( 10) GAGGTGGGCGTGGCTG 1 chr1:235504255-235504755 ( 7) GGAGGGGGCGGGGCTT 1 chr6:169840137-169840637 ( 13) GGAGTGGGCGTGGGTG 1 chr7:100852153-100852653 ( 38) GAGGTGGGCGGGGCTG 1 chr16:70800932-70801432 ( 77) GGTGGGGGCGTGGCTG 1 chr17:7435136-7435636 ( 70) GAAAGGGGCGTGGCTG 1 chr19:42302169-42302669 ( 10) GGAGTGGGCGTGGCGG 1 chr19:17293879-17294379 ( 83) CGAGGGGGCGTGGCTG 1 chr19:49867364-49867864 ( 61) GGAAGGGGCGTGGCTG 1 chr19:43533781-43534281 ( 61) GGAATGGGCGGGGCTG 1 chr19:39125748-39126248 ( 42) GAGGGGGGCGGGGCCG 1 chr5:138352203-138352703 ( 49) GAAGTGGGCGGGTCCT 1 chr19:39480576-39481076 ( 45) CGAGTGGGCGGGGCCG 1 chr15:45200281-45200781 ( 57) CAAGGGGGCGGGGCTT 1 chr12:56152317-56152817 ( 73) GGAGGGGGCGGGGCAT 1 chr9:137423034-137423534 ( 77) GGAGTGGGCGTAGCCG 1 chr22:31661949-31662449 ( 80) GAAGGGGGCGTGGCAC 1 chr10:97687168-97687668 ( 33) TGAGGGGGCGTGTCTG 1 chr19:6161189-6161689 ( 76) GAAGTGGGTGGGGCCT 1 chrX:15737879-15738379 ( 5) GAGAGGGGCGTGGCTG 1 chr19:17075237-17075737 ( 32) CAAGGGGGCGGGTCCG 1 chr19:6677828-6678328 ( 60) GGTGTGGGCGTGGCAT 1 chr5:180494025-180494525 ( 18) TAAGGGGGCGGGGCCT 1 chr7:75914819-75915319 ( 55) GGTGGGGGCGTGGCCA 1 chr1:171741866-171742366 ( 34) GGAGGGGGCGGGTCCA 1 chr18:12377198-12377698 ( 84) GCTGGGGGCGGGGCTG 1 chr17:74776112-74776612 ( 62) GAAGTGGGCGGGGCGC 1 chr9:137156920-137157420 ( 5) GAGGTGGGCGGGGCCA 1 chr19:49580372-49580872 ( 20) GAAGTGGGCGGAGCGG 1 chr20:35771609-35772109 ( 51) GTAGTGGGCGTGGCCT 1 chr19:55624405-55624905 ( 73) GCAGGGGGCGTGGCGG 1 chr5:139403659-139404159 ( 21) GGTGGGGGCGGGGCCA 1 chr2:219552489-219552989 ( 57) GGAGGGGGCGTGACCG 1 chr2:241881440-241881940 ( 38) GCAGGGGGCGTGGCCA 1 chr19:48321769-48322269 ( 46) AGAGGGGGCGTGGCCA 1 chr18:74495855-74496355 ( 16) GATGTGGGCGTGGCGA 1 chr1:24744931-24745431 ( 29) GTAGGGGGCGTGGCCT 1 chr10:102743415-10274391 ( 49) TAAGGGGGCGGGGCCA 1 chr9:113401128-113401628 ( 67) CGTGTGGGCGGGGCCG 1 chr7:103074628-103075128 ( 29) CCAGGGGGCGGGGCTG 1 chr19:35869574-35870074 ( 34) CAGGTGGGCGGGGCCG 1 chr12:52023584-52024084 ( 43) GTAGGGGGCGTGGCCT 1 chr2:121076799-121077299 ( 83) AAGGTGGGCGGGGCCG 1 chr19:40570494-40570994 ( 40) CGTGTGGGCGGGGCTT 1 chr19:7871907-7872407 ( 25) GGAAGGGGCGTGGCCA 1 chr16:89142387-89142887 ( 17) GGTGTGGGTGTGTCTG 1 chr12:64759205-64759705 ( 74) GGCGTGGGCGGGGCTG 1 chr19:33521613-33522113 ( 32) GCAGGGGGCGGGGCAT 1 chr6:37819212-37819712 ( 31) GGAGGGGGCGGAGCGG 1 chr5:173331937-173332437 ( 10) CAAGGGGGCGGGGCGT 1 chr19:47428128-47428628 ( 81) GATGGGGGTGTGGCTA 1 chr7:1011206-1011706 ( 56) GGTGTGGGTGTGTCTG 1 chr17:82273275-82273775 ( 6) GAGGGGGGCGGAGCCG 1 chr19:54417022-54417522 ( 45) TAAGTGGGTGTGTCTG 1 chr17:45161326-45161826 ( 39) AAGGTGGGCGGGGCAG 1 chr19:7870602-7871102 ( 34) GGAGGGGGCGTGGTCA 1 chr17:48830768-48831268 ( 7) CGTGTGGGCGGGGCAG 1 chr19:33080940-33081440 ( 27) CGAGGGGGCGGGGCCC 1 chr9:136342690-136343190 ( 58) GCGGTGGGCGTGGCAG 1 chr19:11346420-11346920 ( 79) GGAGGGGGCGGGGTCA 1 chr19:35903637-35904137 ( 76) GAGATGGGCGGGGCCT 1 chr19:3573851-3574351 ( 62) GTTGTGGGCGTGGCCT 1 chr19:6767420-6767920 ( 13) GAAGGAGGCGTGGCTA 1 chr1:244864385-244864885 ( 53) GTAATGGGCGGGGCCG 1 chr16:88882182-88882682 ( 16) TGTGTGGGTGTGGCTG 1 chr12:132305303-13230580 ( 71) GGTGAGGGCGTGTCTG 1 chr9:137022003-137022503 ( 2) AGTGGGGGCGTGGCTC 1 chr1:92080231-92080731 ( 60) GAAGGGGGCGTTTCCG 1 chr1:15246916-15247416 ( 60) GATGAGGGCGTGGCCT 1 chr17:17206273-17206773 ( 79) GACGGGGGCGTGGCCT 1 chr11:112961078-11296157 ( 39) GCGGGGGGCGGGGGTG 1 chr1:33181900-33182400 ( 65) GGTGGGGGTGGGGCGG 1 chr16:89008739-89009239 ( 36) GAGGTGGGTGTGTCAG 1 chr15:65868966-65869466 ( 9) GATGGGGGCGGGGTTC 1 chr1:54715544-54716044 ( 24) CCTGGGGGCGTGGCCG 1 chr8:10839693-10840193 ( 39) CGAGGGGGCGGAGCAG 1 chr11:72223089-72223589 ( 44) GGAGGGGGCGGGCCAG 1 chr1:2586348-2586848 ( 80) CGAGGGGGCGGAGCAG 1 chr17:35947063-35947563 ( 54) GAAGTGGGCGTTTCAG 1 chr1:228130882-228131382 ( 11) CAAGTGGGCGTAGCAT 1 chr2:9630880-9631380 ( 54) GAGGGGGGCGGAGCGG 1 chr17:28728486-28728986 ( 67) AGAGTGGGTGGGTCCG 1 chr19:40798656-40799156 ( 70) GGAGGGGGCGTTTCTT 1 chr1:151282155-151282655 ( 71) CAAGGGGGCGGAGCCA 1 chr16:11742625-11743125 ( 76) GCGGTGGGCGGAGCTG 1 chr10:130110560-13011106 ( 64) GAAGGGGGCGTGGTGC 1 chr8:94719611-94720111 ( 53) GAGGGGGGTGGGTCAG 1 chr2:197499753-197500253 ( 27) GGGAGGGGCGGGGCTC 1 chr17:64975383-64975883 ( 21) CCAGTGGGCGTGGCGT 1 chr19:43754470-43754970 ( 44) GGTGGGGGCGGGGAGG 1 chr1:108746419-108746919 ( 4) AGAGGGGGTGGGGCAT 1 chr6:17706121-17706621 ( 27) GGAGGGGGCGGTGGCG 1 chr2:222656119-222656619 ( 73) CAGGTGGGCGGGGCGA 1 chr4:731282-731782 ( 35) TGGGTGGGCGTGGCCC 1 chr18:24397732-24398232 ( 2) GGAGTGGGCGGGGAAC 1 chr19:36114733-36115233 ( 17) AAAGAGGGCGGAGCTG 1 chr17:47971116-47971616 ( 10) GAGGGGGGCGTGAGCG 1 chr17:78140317-78140817 ( 14) GTTGGGGGCGGGGCCC 1 chr17:35141972-35142472 ( 57) GATGGGGGCGGGGGGC 1 chr1:84690570-84691070 ( 17) GAAGGGGGCGGGGAGC 1 chr12:1907471-1907971 ( 27) CTGGTGGGCGTGTCTG 1 chr11:69376929-69377429 ( 31) CGGGTGGGCGTGTGCG 1 chr14:105562657-10556315 ( 40) TGAGTGGGTGTGTCGG 1 chr4:88456812-88457312 ( 77) GTGGGGGGCGTGGCGT 1 chr5:56123720-56124220 ( 55) AGAGTGGGCGGATGTG 1 chr5:134371102-134371602 ( 65) GGAGGGGGCGGGACGC 1 chr1:26432023-26432523 ( 45) GGAAGGGGCGTGTCGC 1 chr12:121839367-12183986 ( 26) AGTGTGGGCGGAGCCT 1 chr1:35031536-35032036 ( 45) GTAGTGGGCGGGACGG 1 chr7:129952765-129953265 ( 27) CGGAGGGGCGGGTCTG 1 chr1:228139855-228140355 ( 76) GGTGGAGGCGGGGCTA 1 chr19:43463557-43464057 ( 40) GCTGTGGGCGTGGTCT 1 chr6:166956332-166956832 ( 57) CCTGGGGGCGTGGCTC 1 chr19:49877117-49877617 ( 78) GAAGTGGGCGTTTCAA 1 chr12:50167250-50167750 ( 79) GGAAGGGGCGTGGATC 1 chr17:60392016-60392516 ( 12) GGAGGGGGCGGAAGTG 1 chr19:37906611-37907111 ( 9) GGAGGGGGCGGTGGAG 1 chr5:177497415-177497915 ( 60) CTAGTGGGCGTGGTCG 1 chr19:50384041-50384541 ( 44) GGCGGGGGCGTGGCCC 1 chr19:43475186-43475686 ( 24) TCAGGGGGCGTGGTTT 1 chr19:17202251-17202751 ( 44) CAGGTGGGTGTGGCAT 1 chr19:45467669-45468169 ( 76) CAGGGGGGCGGGTCCC 1 chrX:1452822-1453322 ( 66) GACATGGGCGTGGCCT 1 chr8:18083983-18084483 ( 15) GGAGGAGGCGGGACTG 1 chr19:2335256-2335756 ( 22) AAAGGAGGCGGGGCCT 1 chr19:8592368-8592868 ( 6) ACGGTGGGCGTGGCCA 1 chr17:7281274-7281774 ( 82) CGGAGGGGCGTGGCCT 1 chr6:170160306-170160806 ( 80) TCTGGGGGCGTGGCCA 1 chr12:57752241-57752741 ( 34) TAAGGGGGCGGAGGGG 1 chr5:180594723-180595223 ( 85) TATGTGGGTGTGTGTG 1 chr10:72625844-72626344 ( 55) AGAGTGGGCGGAGGGG 1 chr14:106348922-10634942 ( 6) AGGGAGGGCGGGGCTT 1 chr19:8525510-8526010 ( 57) AAAGTGGGCGGGCCCA 1 chr19:3434972-3435472 ( 47) GGCGGGGGCGGAGCCG 1 chr18:80033805-80034305 ( 41) CGAGTGGGCGGGGTGA 1 chr11:133738487-13373898 ( 39) TATGTGGGTGTGTGTG 1 chr19:49363383-49363883 ( 75) GACGTGGGCGTGGTCT 1 chr15:42920675-42921175 ( 68) GAAGGGGGCGGAGAGT 1 chr16:1342797-1343297 ( 21) TGAGTGGGTGGAGCTA 1 chr6:69796801-69797301 ( 57) AGCGGGGGCGGGGCAG 1 chr1:46132500-46133000 ( 46) GGAAGGGGCGGTGGTG 1 chr12:116910645-11691114 ( 41) GCCGGGGGCGTGGCGG 1 chr16:2603106-2603606 ( 80) CCAGTGGGCGGGACAG 1 chr14:106872513-10687301 ( 47) GGAGGGGGCGGGCGCA 1 chr12:132303820-13230432 ( 18) GGTGAGGGTGTGTCCG 1 chr3:194352476-194352976 ( 43) TAAGTGGGTGTGAGTG 1 chr6:79078126-79078626 ( 20) CCGGGGGGCGGGGGCG 1 chr1:231528340-231528840 ( 55) GCGGTGGGCGGAGCCA 1 chr15:83206993-83207493 ( 65) AAAGGGGGCGGGCGCG 1 chr21:44810816-44811316 ( 9) TATGTGGGTGTGTGCG 1 chr19:36604694-36605194 ( 4) CGGGGGGGCGGGGGGT 1 chr22:41468738-41469238 ( 51) GCAATGGGCGGAGCTC 1 chr21:46635658-46636158 ( 7) AAAGGGGGCGGAGGCC 1 chr6:34888938-34889438 ( 67) CTAGGGGGCGGGGCGC 1 chr16:740917-741417 ( 17) GAGGTGGGCGGGGAGC 1 chr17:40476138-40476638 ( 23) TAGAGGGGCGTGTGTG 1 chr15:68277456-68277956 ( 79) GGAGAGGGCGGGAGCG 1 chr16:28924634-28925134 ( 19) TAGGAGGGCGGGGCCA 1 chr1:202204265-202204765 ( 61) GAAGGAGGTGTGTGTG 1 chr16:31179764-31180264 ( 64) GAAGGGGGCGGAGTGC 1 chr1:212791572-212792072 ( 3) ACTGTGGGCGGGGCAC 1 chr7:100081507-100082007 ( 79) CAAGTGGGCGTTGGGG 1 chr10:132752267-13275276 ( 38) TGGAGGGGCGTGGCGT 1 chr5:103119977-103120477 ( 84) GAGGAGGGCGGGGAAG 1 chr19:40284971-40285471 ( 48) GCGATGGGCGGGGGTA 1 chr4:4673001-4673501 ( 64) GAGAGGGGCGTGGTCC 1 chr17:82223968-82224468 ( 37) TGTAGGGGTGTGTCTG 1 chr1:226978484-226978984 ( 60) GAGGTGGGTGTGTAAG 1 chr20:38446409-38446909 ( 46) GCTGGGGGCGCGGCTG 1 chr5:138337319-138337819 ( 29) GGAGGGGGCGGAGAGA 1 chr12:12611654-12612154 ( 4) AGGGTGGGCGGGAGCG 1 chr10:5889817-5890317 ( 42) GGTGGGGGCGCGGCCA 1 chr9:85743204-85743704 ( 76) CCAGGGGGTGGGGGAG 1 chr1:228438217-228438717 ( 66) AGAGAGGGTGTGGCAT 1 chr1:232950442-232950942 ( 52) CTGGTGGGCGGGGGTA 1 chr1:8878533-8879033 ( 17) TGAGGGGGCGTGCCCC 1 chr7:1718963-1719463 ( 7) TTGGTGGGCGGGGCCC 1 chr5:173056941-173057441 ( 74) CCAATGGGCGTGGGGG 1 chr17:42181064-42181564 ( 70) ATGATGGGCGGGGCTT 1 chr5:145835119-145835619 ( 31) CACATGGGCGTGGCCT 1 chr19:2945134-2945634 ( 47) CGTGGGGGCGGGACCC 1 chr19:42133025-42133525 ( 48) CCGGAGGGCGGGGCCG 1 chr12:389106-389606 ( 18) GCAGGGGGCGGAGGGA 1 chr15:67049338-67049838 ( 43) AGAGTGGGTGTGTAAG 1 chr6:28764044-28764544 ( 72) AAAGTGGGCGTATTTC 1 chr15:67521623-67522123 ( 6) GGGAGGGGCGGGTCGC 1 chr16:2682219-2682719 ( 44) CCTGTGGGCGGGACAG 1 chr17:21235874-21236374 ( 36) TGGATGGGTGTGGGTG 1 chr19:42325345-42325845 ( 24) CGAGGGGGCGGGAGCC 1 chr6:149963608-149964108 ( 18) CGCGGGGGCGGGTCGG 1 chr10:102420852-10242135 ( 2) CAAGGAGGCGGGTTTG 1 chr19:7394768-7395268 ( 75) GAAGGAGGCGTGCCCT 1 chr1:175023211-175023711 ( 59) ACGAGGGGCGGGGCCT 1 chr17:45148340-45148840 ( 38) GGAGGAGGCGGAGGAG 1 chr9:135967577-135968077 ( 50) TGTGTGGGCGTGTTGT 1 chr4:105708457-105708957 ( 81) AGTAGGGGCGGGGGAA 1 chr3:41199151-41199651 ( 44) ACAAGGGGCGGGGCGC 1 chrX:15675361-15675861 ( 84) GATAGGGGCGTAACCT 1 chr15:89334783-89335283 ( 34) CTGGTGGGCGGAGGTG 1 chr19:38975200-38975700 ( 64) CGGAGGGGCGGGTCCC 1 chr12:2004286-2004786 ( 76) CAGGAGGGTGGGGGTG 1 chr1:241998455-241998955 ( 75) CGTGGGGGTGGGGTTC 1 chr2:74454791-74455291 ( 66) GGAAAAGGCGTGTCTG 1 chr19:12840495-12840995 ( 31) CAGGTGGGCGGAGACT 1 chr1:26692821-26693321 ( 11) GAAGGGGGCAGGGCTG 1 chr6:13614996-13615496 ( 20) AGGAAGGGCGTGGCCT 1 chr9:129496552-129497052 ( 17) GAAAGGGGCGGACCGG 1 chr19:38335508-38336008 ( 41) GAGGAGGGCGTGCCTC 1 chr9:128786930-128787430 ( 57) GGGCGGGGCGGGGCTG 1 chr19:38388015-38388515 ( 59) CGAAGGGGCGGGCCCA 1 chr16:68244974-68245474 ( 70) GGGAGGGGCGTATATG 1 chr5:116574640-116575140 ( 58) AAAGTAGGCGGAGTTG 1 chr17:68457513-68458013 ( 40) GCTGTGGGCGGACCCG 1 chr1:155050347-155050847 ( 47) GAGGTGGGCGTTAGCG 1 chr22:35840392-35840892 ( 23) CGTGTGTGCGTGTGTG 1 chr19:38224126-38224626 ( 61) AGTGAGGGCGGGTGAG 1 chr19:8240350-8240850 ( 33) CAAGTGTGTGTGTGTG 1 chr1:29230706-29231206 ( 65) GGCAGGGGCGGGGCGC 1 chr4:4541842-4542342 ( 15) GGGGGAGGCGTGTGGG 1 chr19:37594932-37595432 ( 75) TGTGTGTGCGTGTGTG 1 chr20:38356210-38356710 ( 31) GGTGTGTGTGTGTGTG 1 chr1:154558621-154559121 ( 25) CAGGGGGGCGGGAAAG 1 chr5:141618903-141619403 ( 30) GAGAGGGGCGGAGGGA 1 chr6:35342188-35342688 ( 35) GCGGTGGGCGGAGAGG 1 chr1:31815820-31816320 ( 36) GATAGGGGCGGAGTCC 1 chr22:41446660-41447160 ( 24) TGCAGGGGCGGGGCCA 1 chr1:243256039-243256539 ( 48) CTAGTGGGCGGGAGCA 1 chr18:50281843-50282343 ( 85) GGAAAAGGCGGGGCCT 1 chr1:202205553-202206053 ( 23) GAGGTGTGCGTATGTG 1 chr12:96035718-96036218 ( 40) AGCGAGGGCGGGGCGG 1 chr12:6937930-6938430 ( 33) TGGGTGGGCGGGCGAG 1 chr15:78750948-78751448 ( 11) GGAAGGGGCGGGCACT 1 chr17:39154318-39154818 ( 84) AATAGGGGTGTGGTCT 1 chr17:80980358-80980858 ( 72) TGAGTGTGTGTGTGTG 1 chr19:40576639-40577139 ( 25) GAAGTGGGTGCGGGCC 1 chr16:22296930-22297430 ( 58) TTCGGGGGCGTGGGTT 1 chr16:4253819-4254319 ( 14) CTTGGGGGCGGGCCAG 1 chr1:111592701-111593201 ( 60) TCAGTGGGTGTGTTGG 1 chr10:123008529-12300902 ( 78) CAGGGGGGCGGGAAGG 1 chr14:103520893-10352139 ( 83) CGCGGGGGTGGGGCCC 1 chr4:3074159-3074659 ( 2) GGACGGGGCGGGACTG 1 chr20:62500147-62500647 ( 38) CGGGAGGGCGGGGGGA 1 chr14:91060388-91060888 ( 58) GCAGGGGGCGGTTTGG 1 chr12:54207673-54208173 ( 56) GGAAGGGGTGTGCGCT 1 chr7:1115617-1116117 ( 77) TGCGTGGGCGTTGGTG 1 chr3:194672340-194672840 ( 52) GACGGGGGCGTTTCCC 1 chr1:228109140-228109640 ( 10) AGAGTGGGCGGTGAGA 1 chr1:228173819-228174319 ( 9) GCTGTGGGCGCGGCAC 1 chr20:3710824-3711324 ( 81) AAAGGGGGCGGTGTGC 1 chr15:67254496-67254996 ( 54) TCTAGGGGCGGGGTCA 1 chr7:876170-876670 ( 48) CCCAGGGGCGGGTCCG 1 chr16:31032947-31033447 ( 9) CGTGTGGGCGTCGCTC 1 chr1:226977817-226978317 ( 76) GACGTGTGCGGGTGTT 1 chr11:78188306-78188806 ( 54) GAGGTGGGTGCGGCAC 1 chr19:2168818-2169318 ( 30) GCTGTGGGCGGGCAGG 1 chr17:20155659-20156159 ( 40) GACGGGGGCGGGCCGC 1 chr10:101830475-10183097 ( 21) CGTGTGTGTGTGTGTG 1 chr20:45891023-45891523 ( 16) CTGGGGGGCGGTGGCG 1 chr20:1118287-1118787 ( 10) GAGCGGGGCGTGGCCC 1 chr17:7329417-7329917 ( 53) AGCGAGGGCGGGGTCG 1 chr19:39390668-39391168 ( 51) CAGAGGGGCGTGCCGA 1 chr5:1950692-1951192 ( 14) GCTGTGGGCGCGTGAG 1 chr16:30923113-30923613 ( 16) GCGGAGGGCGTGCCCA 1 chr19:40690716-40691216 ( 69) TGGGGGTGTGGGGCGG 1 chr22:31159887-31160387 ( 75) GAGAGGGGCGGCTCCG 1 chr16:71845672-71846172 ( 78) GCCGGGGGCGGGACGA 1 chr1:27489206-27489706 ( 49) TGTGTGTGTGTGTGTG 1 chr14:103921400-10392190 ( 82) GTTAGGGGTGTGCCCG 1 chr5:181223217-181223717 ( 16) GGGGTAGGCGGTTCCT 1 chr19:17334710-17335210 ( 48) GAGGTAGGCGGGCGAG 1 chr19:37594313-37594813 ( 7) GGCGGGGGTGTGGTGC 1 chr5:176388744-176389244 ( 31) TAAGTGGGTGCGGTAG 1 chr16:3400906-3401406 ( 67) CTAGTGGGCGTCTCCG 1 chr15:76905024-76905524 ( 49) GCGAGGGGCGTGCGTA 1 chr6:26188908-26189408 ( 66) AGAAGGGGCGGGAACC 1 chr19:35612525-35613025 ( 38) GAGGGAGGCGGTGTCG 1 chr12:6662702-6663202 ( 15) GGAGGGTGCGGAGAAA 1 chr5:10353624-10354124 ( 53) TGGGGGGGCGGCGGTG 1 chrX:73944015-73944515 ( 79) GGGGTGGGCGTCACAG 1 chr12:49060548-49061048 ( 51) CGAGAGGGCGGGATCC 1 chr19:33176937-33177437 ( 64) TATGAGGGTGTGAGCG 1 chr8:11016341-11016841 ( 75) GTAGGGGGCGTTCCAA 1 chr8:630783-631283 ( 57) AATGTGGGTGGTGGGT 1 chr19:12669253-12669753 ( 12) GCTGAGGGCGGATTTT 1 chr7:101165324-101165824 ( 52) GGTGGAGGCGCGGGCG 1 chr17:3846115-3846615 ( 43) CCAGGGGGCGGCGGCG 1 chr19:41310148-41310648 ( 37) GGTGGGTGCGGTTGCG 1 chr6:157323332-157323832 ( 44) GGAGGAGGCGGTAGCG 1 chr15:49046302-49046802 ( 41) GCTGGAGGCGTAGTTA 1 chr11:57741104-57741604 ( 42) GCGATGGGTGGTTCCG 1 chr20:1466681-1467181 ( 69) GCGTGGGGCGGGGCTG 1 chr1:226186639-226187139 ( 63) ATGGGGTGCGGGGGAG 1 chr12:121352303-12135280 ( 35) CAAGAGTGCGGGGAGG 1 chr19:44025270-44025770 ( 12) TGGAGGGGCGCGGGCG 1 chr14:22982550-22983050 ( 78) AAAGAGTGTGGGGGTA 1 chr5:111091980-111092480 ( 70) ATGGGAGGCGTGACTT 1 chr17:993473-993973 ( 28) AGGGTGGGTGGATTAT 1 chr15:101295097-10129559 ( 32) CCCGGAGGCGTGGCTC 1 chr1:234373452-234373952 ( 8) GACGTGGGCGGGCAGA 1 chr6:33571110-33571610 ( 54) GGAGTGGGTGCGCCCC 1 chr14:102591975-10259247 ( 73) GCGGGAGGCGTGCGCG 1 chr8:25458845-25459345 ( 75) GGAGTGTGCGCGGACT 1 chr1:36464186-36464686 ( 66) GCACGGGGCGGAGCTC 1 chr20:327049-327549 ( 52) GCAGGAGGCGCGTGCG 1 chr15:82540307-82540807 ( 60) AGCGGGGGCGGCGGTG 1 chr9:128947493-128947993 ( 54) GTGAGGTGCGGAGCGG 1 chr9:133417969-133418469 ( 83) GCTGTGTGTGTAGCAC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GRRGKGGGCGKGGCBG MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 16 n= 51000 bayes= 8.81483 E= 2.3e-191 -51 -54 78 -65 79 -89 44 -122 118 -189 -16 16 -14 -459 138 -586 -122 -1492 79 102 -140 -1492 158 -1492 -1492 -1492 160 -169 -1492 -1492 168 -1492 -1492 143 -1492 -22 -586 -1492 168 -1492 -1492 -300 85 108 -37 -378 129 -140 -116 -194 102 11 -134 92 -38 -96 -37 24 -68 63 -31 -86 66 -3 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GRRGKGGGCGKGGCBG MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 16 nsites= 309 E= 2.3e-191 0.132686 0.213592 0.533981 0.119741 0.326861 0.168285 0.423948 0.080906 0.427184 0.084142 0.278317 0.210356 0.171521 0.012945 0.812298 0.003236 0.080906 0.000000 0.537217 0.381877 0.071197 0.000000 0.928803 0.000000 0.000000 0.000000 0.941748 0.058252 0.000000 0.000000 1.000000 0.000000 0.000000 0.838188 0.000000 0.161812 0.003236 0.000000 0.996764 0.000000 0.000000 0.038835 0.563107 0.398058 0.145631 0.022654 0.760518 0.071197 0.084142 0.080906 0.631068 0.203883 0.074434 0.588997 0.239482 0.097087 0.145631 0.368932 0.194175 0.291262 0.152104 0.171521 0.491909 0.184466 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GRRGKGGGCGKGGCBG MEME-1 regular expression -------------------------------------------------------------------------------- [GC][GA][AGT]G[GT]GGGCG[GT]G[GT][CG][CT]G -------------------------------------------------------------------------------- Time 392.46 secs. ******************************************************************************** ******************************************************************************** MOTIF TGTRTGTGTGKGTGTG MEME-2 width = 16 sites = 34 llr = 485 E-value = 1.2e-042 ******************************************************************************** -------------------------------------------------------------------------------- Motif TGTRTGTGTGKGTGTG MEME-2 Description -------------------------------------------------------------------------------- Simplified A 1:24::1:2:::::11 pos.-specific C :11::::::::::1:: probability G 18262a1a:969:918 matrix T 7:5:7:8:8141a:8: bits 2.4 * 2.2 * 1.9 * 1.7 ** * Relative 1.4 **** *** Entropy 1.2 * ****** **** (20.6 bits) 1.0 ** ************ 0.7 ** ************* 0.5 ** ************* 0.2 **************** 0.0 ---------------- Multilevel TGTGTGTGTGGGTGTG consensus AAG T sequence G -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGTRTGTGTGKGTGTG MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ---------------- chr9:135967577-135968077 + 8 2.25e-10 GCAGGCg tgtgtgtgtgtgtgtg tgtgtgtgCG chr19:35947346-35947846 + 53 2.25e-10 GCACTGTTCg tgtgtgtgtgtgtgtg tgtgtgtgtg chr19:8240350-8240850 + 49 2.25e-10 tgtgtgtgtg tgtgtgtgtgtgtgtg tTTTCATCTC chr22:35840392-35840892 + 41 2.25e-10 cgtgtgtgcg tgtgtgtgtgtgtgtg tgtgtgtgtA chr17:40476138-40476638 + 39 2.25e-10 GGCgtgtgtg tgtgtgtgtgtgtgtg tgtgtgtgtg chr20:38356210-38356710 - 13 2.25e-10 TGTGTGTGTG TGTGTGTGTGTGTGTG TGCGCGTGTG chr21:44810816-44811316 - 35 5.97e-10 TTCGTGTGTG TGTATGTGTGGGTGTG TGCGTGTGTG chr5:180594723-180595223 + 69 5.97e-10 tgtgagggtg tgtatgtgtgggtgtg tatgtgggtg chr11:133738487-13373898 + 75 6.05e-09 tgtgggtgca tgtgggtgtgggtgtg tatgtgggtg chr10:101830475-10183097 - 5 8.14e-09 TGTGTGTGTG TGTGTGTGTGTGTGGG CGTG chr20:62500147-62500647 + 83 1.27e-08 TGTGTGTCCA TGAGTGTGAGGGTGTG TG chr3:194352476-194352976 + 68 1.62e-08 gtgcagtgag tgggtgtgtgggtgta tgtgtgtggt chr1:202204265-202204765 - 43 1.83e-08 TGTGTGTGTT TGGAGGTGTGTGTGTG TTTGGAGGTG chr1:202205553-202206053 - 5 1.83e-08 CGTATGTGTT TGGAGGTGTGTGTGTG TATT chr14:105562657-10556315 + 60 2.69e-08 tgtcggtgtg agggtgtgtgggtgtg agaatgcatg chr16:89142387-89142887 - 55 5.40e-08 TGGCTCTGTC TGCAGGTGTGGGTGTG CCTGCAGGTG chr16:88882182-88882682 + 42 9.65e-08 TGTGTGTATG GCTGTGTGTGGGTGTG GCTGTGTGCG chr7:1011206-1011706 - 22 9.65e-08 TGGGCGTGTT TGGGTGTGTGGGTGTT TCTGGGTGTC chr19:54417022-54417522 - 68 1.30e-07 CATGTGAGTG TGCATGTGAGTGTGTA ATGGGAGTAA chr19:36604694-36605194 - 79 1.43e-07 ACTGTG TGATTGTGTTTGTGTG TGCCGTTCTG chr17:80980358-80980858 + 56 2.07e-07 aatgagtcag tgaatgagtgtgtgag tgagtgtgtg chr12:132303820-13230432 - 70 2.26e-07 TGAGGCTGTG TCTGGGTGAGGGTGTG CCCCGGTGAG chr6:169840137-169840637 - 82 3.76e-07 TGG AGTGGGTGTGGGTGGG CATGGCGTGG chr17:21235874-21236374 - 6 8.21e-07 GATGGCTGAG TGGATGAGTGGGTGGA TGGGT chr2:241620259-241620759 + 9 9.47e-07 gtgagggg tgagtgagttggtgag tgaggagtga chr1:27489206-27489706 - 65 1.02e-06 ATTGAGGAGG ACACTGTGTGTGTGTG TGTGTGTGTG chr17:82223968-82224468 - 59 1.35e-06 ACTGCACAGG TGTAGGGGTGTGTCTG CACGGGTGTA chr19:55643343-55643843 + 11 1.45e-06 TACTTTCCTC TCGGTGTGTGTTTCTG GCCGGAGCCG chr19:17202251-17202751 - 66 1.45e-06 GGCGTGGCAT GGCATGGGTGGGTGTG GCATGTCAGG chr15:67049338-67049838 - 17 1.88e-06 CCTTTGGGAA GGTATGTGATGGTGGG CCAAGATAAA chr17:1293413-1293913 + 67 3.66e-06 TGTCATGAGT TGAGTTTGATGTTGTG GGTTGAGTTT chr19:48321769-48322269 - 65 4.57e-06 CGTGCCTTAC AGAGCGAGTGGGTGTA ACCAGAGGGG chr17:993473-993973 - 65 5.65e-06 GTGAGGGTGG ATTATGTGAGGGTGGA TTATGCGAGG chr2:148020458-148020958 - 70 1.27e-05 CGCGGGGCAT GCCGGGAGTGGTTGTG TACGGTCCGC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGTRTGTGTGKGTGTG MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr9:135967577-135968077 2.2e-10 7_[+2]_77 chr19:35947346-35947846 2.2e-10 52_[+2]_32 chr19:8240350-8240850 2.2e-10 48_[+2]_36 chr22:35840392-35840892 2.2e-10 40_[+2]_44 chr17:40476138-40476638 2.2e-10 38_[+2]_46 chr20:38356210-38356710 2.2e-10 12_[-2]_72 chr21:44810816-44811316 6e-10 34_[-2]_50 chr5:180594723-180595223 6e-10 68_[+2]_16 chr11:133738487-13373898 6e-09 74_[+2]_10 chr10:101830475-10183097 8.1e-09 4_[-2]_80 chr20:62500147-62500647 1.3e-08 82_[+2]_2 chr3:194352476-194352976 1.6e-08 67_[+2]_17 chr1:202204265-202204765 1.8e-08 42_[-2]_42 chr1:202205553-202206053 1.8e-08 4_[-2]_80 chr14:105562657-10556315 2.7e-08 59_[+2]_25 chr16:89142387-89142887 5.4e-08 54_[-2]_30 chr16:88882182-88882682 9.7e-08 41_[+2]_43 chr7:1011206-1011706 9.7e-08 21_[-2]_63 chr19:54417022-54417522 1.3e-07 67_[-2]_17 chr19:36604694-36605194 1.4e-07 78_[-2]_6 chr17:80980358-80980858 2.1e-07 55_[+2]_29 chr12:132303820-13230432 2.3e-07 69_[-2]_15 chr6:169840137-169840637 3.8e-07 81_[-2]_3 chr17:21235874-21236374 8.2e-07 5_[-2]_79 chr2:241620259-241620759 9.5e-07 8_[+2]_76 chr1:27489206-27489706 1e-06 64_[-2]_20 chr17:82223968-82224468 1.3e-06 58_[-2]_26 chr19:55643343-55643843 1.4e-06 10_[+2]_74 chr19:17202251-17202751 1.4e-06 65_[-2]_19 chr15:67049338-67049838 1.9e-06 16_[-2]_68 chr17:1293413-1293913 3.7e-06 66_[+2]_18 chr19:48321769-48322269 4.6e-06 64_[-2]_20 chr17:993473-993973 5.6e-06 64_[-2]_20 chr2:148020458-148020958 1.3e-05 69_[-2]_15 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGTRTGTGTGKGTGTG MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TGTRTGTGTGKGTGTG width=16 seqs=34 chr9:135967577-135968077 ( 8) TGTGTGTGTGTGTGTG 1 chr19:35947346-35947846 ( 53) TGTGTGTGTGTGTGTG 1 chr19:8240350-8240850 ( 49) TGTGTGTGTGTGTGTG 1 chr22:35840392-35840892 ( 41) TGTGTGTGTGTGTGTG 1 chr17:40476138-40476638 ( 39) TGTGTGTGTGTGTGTG 1 chr20:38356210-38356710 ( 13) TGTGTGTGTGTGTGTG 1 chr21:44810816-44811316 ( 35) TGTATGTGTGGGTGTG 1 chr5:180594723-180595223 ( 69) TGTATGTGTGGGTGTG 1 chr11:133738487-13373898 ( 75) TGTGGGTGTGGGTGTG 1 chr10:101830475-10183097 ( 5) TGTGTGTGTGTGTGGG 1 chr20:62500147-62500647 ( 83) TGAGTGTGAGGGTGTG 1 chr3:194352476-194352976 ( 68) TGGGTGTGTGGGTGTA 1 chr1:202204265-202204765 ( 43) TGGAGGTGTGTGTGTG 1 chr1:202205553-202206053 ( 5) TGGAGGTGTGTGTGTG 1 chr14:105562657-10556315 ( 60) AGGGTGTGTGGGTGTG 1 chr16:89142387-89142887 ( 55) TGCAGGTGTGGGTGTG 1 chr16:88882182-88882682 ( 42) GCTGTGTGTGGGTGTG 1 chr7:1011206-1011706 ( 22) TGGGTGTGTGGGTGTT 1 chr19:54417022-54417522 ( 68) TGCATGTGAGTGTGTA 1 chr19:36604694-36605194 ( 79) TGATTGTGTTTGTGTG 1 chr17:80980358-80980858 ( 56) TGAATGAGTGTGTGAG 1 chr12:132303820-13230432 ( 70) TCTGGGTGAGGGTGTG 1 chr6:169840137-169840637 ( 82) AGTGGGTGTGGGTGGG 1 chr17:21235874-21236374 ( 6) TGGATGAGTGGGTGGA 1 chr2:241620259-241620759 ( 9) TGAGTGAGTTGGTGAG 1 chr1:27489206-27489706 ( 65) ACACTGTGTGTGTGTG 1 chr17:82223968-82224468 ( 59) TGTAGGGGTGTGTCTG 1 chr19:55643343-55643843 ( 11) TCGGTGTGTGTTTCTG 1 chr19:17202251-17202751 ( 66) GGCATGGGTGGGTGTG 1 chr15:67049338-67049838 ( 17) GGTATGTGATGGTGGG 1 chr17:1293413-1293913 ( 67) TGAGTTTGATGTTGTG 1 chr19:48321769-48322269 ( 65) AGAGCGAGTGGGTGTA 1 chr17:993473-993973 ( 65) ATTATGTGAGGGTGGA 1 chr2:148020458-148020958 ( 70) GCCGGGAGTGGTTGTG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGTRTGTGTGKGTGTG MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 16 n= 51000 bayes= 10.6194 E= 1.2e-042 -36 -1173 -140 196 -1173 -108 140 -268 13 -140 -60 132 90 -340 92 -268 -1173 -340 -40 196 -1173 -1173 164 -268 -36 -1173 -240 207 -1173 -1173 168 -1173 -10 -1173 -1173 213 -1173 -1173 150 -68 -1173 -1173 84 123 -1173 -1173 155 -109 -1173 -1173 -1173 241 -1173 -240 159 -1173 -168 -1173 -108 207 -36 -1173 140 -268 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGTRTGTGTGKGTGTG MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 16 nsites= 34 E= 1.2e-042 0.147059 0.000000 0.117647 0.735294 0.000000 0.147059 0.823529 0.029412 0.205882 0.117647 0.205882 0.470588 0.352941 0.029412 0.588235 0.029412 0.000000 0.029412 0.235294 0.735294 0.000000 0.000000 0.970588 0.029412 0.147059 0.000000 0.058824 0.794118 0.000000 0.000000 1.000000 0.000000 0.176471 0.000000 0.000000 0.823529 0.000000 0.000000 0.882353 0.117647 0.000000 0.000000 0.558824 0.441176 0.000000 0.000000 0.911765 0.088235 0.000000 0.000000 0.000000 1.000000 0.000000 0.058824 0.941176 0.000000 0.058824 0.000000 0.147059 0.794118 0.147059 0.000000 0.823529 0.029412 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGTRTGTGTGKGTGTG MEME-2 regular expression -------------------------------------------------------------------------------- TG[TAG][GA][TG]GTGTG[GT]GTGTG -------------------------------------------------------------------------------- Time 709.65 secs. ******************************************************************************** ******************************************************************************** MOTIF RKNTTTWWWDTACAYYADWMAWTAWRWWRWW MEME-3 width = 31 sites = 28 llr = 434 E-value = 5.0e-014 ******************************************************************************** -------------------------------------------------------------------------------- Motif RKNTTTWWWDTACAYYADWMAWTAWRWWRWW MEME-3 Description -------------------------------------------------------------------------------- Simplified A 4:42::3532152611644364374543534 pos.-specific C :12:1:22:13251443:1511:1:::1:11 probability G 432212:::3:1111::3111:2::41:4:1 matrix T 1626885364622245244215526146164 bits 2.4 2.2 1.9 1.7 Relative 1.4 * Entropy 1.2 ** ** (22.4 bits) 1.0 ** * * * ** ** * 0.7 * ****** * * **** ******** ** 0.5 ** ****** ** * **** *********** 0.2 ******************************* 0.0 ------------------------------- Multilevel ATATTTTATTTACACTAATCATTATAATATA consensus GGCA GATAGCCTTTCCTAA AATAGTAGAT sequence G CC A G G T -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RKNTTTWWWDTACAYYADWMAWTAWRWWRWW MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ------------------------------- chrUn_KI270467v1:2038-25 + 30 4.42e-15 atgtaccttc atattttatgtacagtatacaatatatattt tgggtacttt chrUn_KI270467v1:2770-32 + 6 1.61e-13 ctttg atattttatgtacagtatatgatatatagtt tgagtacttt chr15:66504752-66505252 + 48 3.22e-10 GGAAATTACG GTATCTATTTTCTTCCAAACGTAATAATAAT TCTTAGAAAA chr1:212596163-212596663 - 33 1.99e-09 CGTCATCTTT GTAATTAAAGCACACTATTATTGTTATAAAG TAAACAATTG chr5:140718675-140719175 + 2 3.05e-09 C GTAGGTCTTTCTCACCAGTCAAGAAAATATA ATCCGGAGAT chr1:232732343-232732843 + 56 3.05e-09 gctgggtcaa atcttgtcagtctttccataattttaaagtt ccccatcagt chr6:142323371-142323871 + 59 6.99e-09 caaacatcat agagtgtatttacacaaacctaaatggtata gcctcctacg chr6:28764044-28764544 - 30 8.54e-09 TAATGCCTAA TTCTTTTTTGTTCAATATCAACACAAAAATT AGCCAGGGGT chr1:183060417-183060917 + 56 1.04e-08 ctagatctta atcatgtttgtattcttagcactaagttgat gccagacaca chr1:205750279-205750779 + 1 1.69e-08 . GTATCTTAGAAAGACTAGAAAAAAAGATTTA TGTAGGGTTC chr6:49541122-49541622 + 54 2.05e-08 GGAGAGAATG ATGATGAATATACTTTAAAACTTTGGATAAT GCAGGCAGCT chr17:8120792-8121292 + 32 2.05e-08 TTTTATTTCA ATTTTTCCTTTTTATCCGTTTTTTTCTTAAA GGCCCCCATC chr7:157880894-157881394 + 6 2.25e-08 TGGGG GTGTTTACAGTAGTCATTATGATAAAATGAA GTCATGAGGG chr20:63339290-63339790 - 51 2.98e-08 TGGATATGAT GTAATTCACTCATCTTTGTGAATATGATGTA ATTCATTCAT chr19:44212627-44213127 + 26 3.27e-08 tactgtgtag ggttgtaattagaattaaacaagataatacg ggtcaaacct chr6:125780082-125780582 - 53 3.59e-08 AATTAAGTGC AGATTTTTAACACAACAAATATATTTAGGAA GAAGCGTTGT chr17:50707706-50708206 + 70 4.30e-08 GCCCGGGCTG GCTGTTTATGTAACTACTGCACAATATTATA chr19:39411927-39412427 - 11 5.15e-08 CACCTGGAGC ACTTTTTTTCCCCATCAGTTTTTATAAACTT ACACATCTAA chr10:1498846-1499346 + 13 8.74e-08 tcgtcattca ctcattactcttcattaatcattcagtcatt actcactcat chr19:49877117-49877617 + 46 8.74e-08 GGTACCTCCT TGGCTTCAATTCCAGTATACAATATGGAGAA GGAAGTGGGC chr17:51260026-51260526 + 55 1.23e-07 TGTATAGTCG GGGTTTCTTGCGCTCCTTTCAATATGTTGCA GCTGCGAAAT chr12:49568002-49568502 - 23 1.34e-07 AACTAGGAAA GCCTTTACTTTCCGCTATTGGTAAAATATTT ACACTTTCCG chr9:85743204-85743704 - 37 1.72e-07 AGTAGCTCTA AGTTCTTAATTACCGCAAAACATAAATCACT CACTCTTGTG chr19:49676274-49676774 + 25 2.20e-07 agaggggttg atggttttaaaaaacTTGGAATGATTATGTC AAGGGCTAGG chr6:26188908-26189408 - 30 2.59e-07 CTTCTCATGA GGTTTTCAAACAGGTCCGTCATGCTATTATA AAAGTGCTGC chr15:67792417-67792917 + 69 3.03e-07 ATGTCATCCC TAATGGTATTAAAAATCAAGATGAAGTTGTA A chr10:87586142-87586642 - 17 3.84e-07 CTTATGACTC ATGGCTACATTCTATCCTTCACTAAAGAATC TTATTGTAGG chr15:67049338-67049838 + 63 1.02e-06 cactctctca ggcatgtttattacctcatcatttaggtgag ggcctct -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RKNTTTWWWDTACAYYADWMAWTAWRWWRWW MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrUn_KI270467v1:2038-25 4.4e-15 29_[+3]_40 chrUn_KI270467v1:2770-32 1.6e-13 5_[+3]_64 chr15:66504752-66505252 3.2e-10 47_[+3]_22 chr1:212596163-212596663 2e-09 32_[-3]_37 chr5:140718675-140719175 3.1e-09 1_[+3]_68 chr1:232732343-232732843 3.1e-09 55_[+3]_14 chr6:142323371-142323871 7e-09 58_[+3]_11 chr6:28764044-28764544 8.5e-09 29_[-3]_40 chr1:183060417-183060917 1e-08 55_[+3]_14 chr1:205750279-205750779 1.7e-08 [+3]_69 chr6:49541122-49541622 2.1e-08 53_[+3]_16 chr17:8120792-8121292 2.1e-08 31_[+3]_38 chr7:157880894-157881394 2.3e-08 5_[+3]_64 chr20:63339290-63339790 3e-08 50_[-3]_19 chr19:44212627-44213127 3.3e-08 25_[+3]_44 chr6:125780082-125780582 3.6e-08 52_[-3]_17 chr17:50707706-50708206 4.3e-08 69_[+3] chr19:39411927-39412427 5.2e-08 10_[-3]_59 chr10:1498846-1499346 8.7e-08 12_[+3]_57 chr19:49877117-49877617 8.7e-08 45_[+3]_24 chr17:51260026-51260526 1.2e-07 54_[+3]_15 chr12:49568002-49568502 1.3e-07 22_[-3]_47 chr9:85743204-85743704 1.7e-07 36_[-3]_33 chr19:49676274-49676774 2.2e-07 24_[+3]_45 chr6:26188908-26189408 2.6e-07 29_[-3]_40 chr15:67792417-67792917 3e-07 68_[+3]_1 chr10:87586142-87586642 3.8e-07 16_[-3]_53 chr15:67049338-67049838 1e-06 62_[+3]_7 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RKNTTTWWWDTACAYYADWMAWTAWRWWRWW MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF RKNTTTWWWDTACAYYADWMAWTAWRWWRWW width=31 seqs=28 chrUn_KI270467v1:2038-25 ( 30) ATATTTTATGTACAGTATACAATATATATTT 1 chrUn_KI270467v1:2770-32 ( 6) ATATTTTATGTACAGTATATGATATATAGTT 1 chr15:66504752-66505252 ( 48) GTATCTATTTTCTTCCAAACGTAATAATAAT 1 chr1:212596163-212596663 ( 33) GTAATTAAAGCACACTATTATTGTTATAAAG 1 chr5:140718675-140719175 ( 2) GTAGGTCTTTCTCACCAGTCAAGAAAATATA 1 chr1:232732343-232732843 ( 56) ATCTTGTCAGTCTTTCCATAATTTTAAAGTT 1 chr6:142323371-142323871 ( 59) AGAGTGTATTTACACAAACCTAAATGGTATA 1 chr6:28764044-28764544 ( 30) TTCTTTTTTGTTCAATATCAACACAAAAATT 1 chr1:183060417-183060917 ( 56) ATCATGTTTGTATTCTTAGCACTAAGTTGAT 1 chr1:205750279-205750779 ( 1) GTATCTTAGAAAGACTAGAAAAAAAGATTTA 1 chr6:49541122-49541622 ( 54) ATGATGAATATACTTTAAAACTTTGGATAAT 1 chr17:8120792-8121292 ( 32) ATTTTTCCTTTTTATCCGTTTTTTTCTTAAA 1 chr7:157880894-157881394 ( 6) GTGTTTACAGTAGTCATTATGATAAAATGAA 1 chr20:63339290-63339790 ( 51) GTAATTCACTCATCTTTGTGAATATGATGTA 1 chr19:44212627-44213127 ( 26) GGTTGTAATTAGAATTAAACAAGATAATACG 1 chr6:125780082-125780582 ( 53) AGATTTTTAACACAACAAATATATTTAGGAA 1 chr17:50707706-50708206 ( 70) GCTGTTTATGTAACTACTGCACAATATTATA 1 chr19:39411927-39412427 ( 11) ACTTTTTTTCCCCATCAGTTTTTATAAACTT 1 chr10:1498846-1499346 ( 13) CTCATTACTCTTCATTAATCATTCAGTCATT 1 chr19:49877117-49877617 ( 46) TGGCTTCAATTCCAGTATACAATATGGAGAA 1 chr17:51260026-51260526 ( 55) GGGTTTCTTGCGCTCCTTTCAATATGTTGCA 1 chr12:49568002-49568502 ( 23) GCCTTTACTTTCCGCTATTGGTAAAATATTT 1 chr9:85743204-85743704 ( 37) AGTTCTTAATTACCGCAAAACATAAATCACT 1 chr19:49676274-49676774 ( 25) ATGGTTTTAAAAAACTTGGAATGATTATGTC 1 chr6:26188908-26189408 ( 30) GGTTTTCAAACAGGTCCGTCATGCTATTATA 1 chr15:67792417-67792917 ( 69) TAATGGTATTAAAAATCAAGATGAAGTTGTA 1 chr10:87586142-87586642 ( 17) ATGGCTACATTCTATCCTTCACTAAAGAATC 1 chr15:67049338-67049838 ( 63) GGCATGTTTATTACCTCATCATTTAGGTGAG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RKNTTTWWWDTACAYYADWMAWTAWRWWRWW MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 31 n= 42000 bayes= 12.5099 E= 5.0e-014 118 -312 46 -81 -240 -154 -12 160 92 -54 -54 18 18 -312 -80 160 -1145 -112 -154 199 -1145 -1145 -54 206 60 -54 -1145 141 130 -54 -1145 77 77 -312 -312 169 18 -212 5 106 -40 -32 -1145 169 151 -54 -212 -8 -8 68 -154 18 160 -112 -212 18 -81 33 -112 92 -81 20 -1145 151 160 -32 -1145 -8 106 -1145 -32 92 106 -212 -154 118 41 58 -154 -8 177 -212 -112 -40 106 -112 -1145 130 41 -1145 -54 151 185 -154 -1145 18 106 -1145 -312 160 151 -312 20 -140 118 -1145 -112 118 77 -212 -312 160 130 -312 33 -81 77 -154 -1145 160 118 -212 -154 106 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RKNTTTWWWDTACAYYADWMAWTAWRWWRWW MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 31 nsites= 28 E= 5.0e-014 0.428571 0.035714 0.428571 0.107143 0.035714 0.107143 0.285714 0.571429 0.357143 0.214286 0.214286 0.214286 0.214286 0.035714 0.178571 0.571429 0.000000 0.142857 0.107143 0.750000 0.000000 0.000000 0.214286 0.785714 0.285714 0.214286 0.000000 0.500000 0.464286 0.214286 0.000000 0.321429 0.321429 0.035714 0.035714 0.607143 0.214286 0.071429 0.321429 0.392857 0.142857 0.250000 0.000000 0.607143 0.535714 0.214286 0.071429 0.178571 0.178571 0.500000 0.107143 0.214286 0.571429 0.142857 0.071429 0.214286 0.107143 0.392857 0.142857 0.357143 0.107143 0.357143 0.000000 0.535714 0.571429 0.250000 0.000000 0.178571 0.392857 0.000000 0.250000 0.357143 0.392857 0.071429 0.107143 0.428571 0.250000 0.464286 0.107143 0.178571 0.642857 0.071429 0.142857 0.142857 0.392857 0.142857 0.000000 0.464286 0.250000 0.000000 0.214286 0.535714 0.678571 0.107143 0.000000 0.214286 0.392857 0.000000 0.035714 0.571429 0.535714 0.035714 0.357143 0.071429 0.428571 0.000000 0.142857 0.428571 0.321429 0.071429 0.035714 0.571429 0.464286 0.035714 0.392857 0.107143 0.321429 0.107143 0.000000 0.571429 0.428571 0.071429 0.107143 0.392857 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RKNTTTWWWDTACAYYADWMAWTAWRWWRWW MEME-3 regular expression -------------------------------------------------------------------------------- [AG][TG][ACGT][TA]T[TG][TAC][ATC][TA][TGA][TC][AC][CT][AT][CT][TC][AC][ATG][TA][CA]A[TA][TAG][AT][TA][AG][AT][TA][AG][TA][AT] -------------------------------------------------------------------------------- Time 988.88 secs. ******************************************************************************** ******************************************************************************** MOTIF SACACMHMCWCACACMYVMCCACACACMCMC MEME-4 width = 31 sites = 34 llr = 529 E-value = 1.6e-030 ******************************************************************************** -------------------------------------------------------------------------------- Motif SACACMHMCWCACACMYVMCCACACACMCMC MEME-4 Description -------------------------------------------------------------------------------- Simplified A 16:6:533:4161725:33226:6:8:4252 pos.-specific C 6282744571828384545472828174836 probability G 31:1::11:2:::::122:2::1:11:1::: matrix T :111313232122::14:2211111132:11 bits 2.4 2.2 1.9 1.7 Relative 1.4 Entropy 1.2 ** * (22.4 bits) 1.0 * ** * **** * * ** * 0.7 ***** * ***** ******* *** 0.5 ****** * ********* ******* *** 0.2 ******************* *********** 0.0 ------------------------------- Multilevel CACACACCCACACACACCCCCACACACACAC consensus G CTCAATT C C CTAATA C TC CA sequence T GT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SACACMHMCWCACACMYVMCCACACACMCMC MEME-4 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ------------------------------- chr17:40476138-40476638 - 56 4.16e-17 CTCCAACACA CACACACACACACACACACACACACACACAC ACACACACAC chr1:202204265-202204765 + 5 7.52e-15 caca cacacctccaaacacacctccacacacacac ctccaaacac chr5:180594723-180595223 - 1 1.98e-14 CACACACCCA CACATACCCTCACACACCCTCACACACACCC chr14:105562657-10556315 - 5 5.64e-13 CACTCACCCT CACACACCCTCACACACCCCCTCACACCCTC TCTC chr19:35947346-35947846 - 70 9.08e-12 . GACTTCGACACACACACACACACACACACAC ACACACACAC chr1:202205553-202206053 + 57 9.08e-12 atacacacct ccttcatacacacacaccccaacacacacac ctccttcaaa chr21:44810816-44811316 + 63 1.25e-11 cacacgaatg cacacatgcacacacccacatacacacacat gcacaca chr11:133738487-13373898 - 8 2.23e-10 CACCCACATA CACACACCCTCACACTCACCCACACCCCCCA CATGTCC chr17:80980358-80980858 - 3 1.63e-09 TTGACTCATC CGCCCATTCACCCACCCACTCACCCACCCAC TC chr19:54417022-54417522 + 13 2.31e-09 ttccaacaca ctcacatgcacacacatatgcacaggcacac tcagacacac chr17:21235874-21236374 + 62 3.62e-09 ctgattcacc cactcatctgcccacccatccatccacccac tcatccac chr17:82223968-82224468 + 3 9.53e-09 CA GACACACCCCTACACCCGTGCACAGACACCT GTGCAGACAC chr3:194352476-194352976 - 11 1.59e-08 ACCCACTTAC CACACATTTTCTCACACACTCTCATTCTACA CACACGAGAC chr17:74513943-74514443 - 36 2.86e-08 CCCATCACAT GACATCACCCATCACATGACCACTCATCACA GGATCACCTT chr1:226978484-226978984 + 2 3.80e-08 C CACACACCTGCACACCTCCTTACATCTTCCA CACACCCACC chr10:1498846-1499346 + 70 4.18e-08 ctcatccctc aacacttattcatcactcatcactcactcat chr17:74514525-74515025 - 64 7.90e-08 TTACAT GATATCACCCATCACATGACCACCCATCACA TGACATCACC chr19:36604694-36605194 + 43 9.42e-08 CGCGCCcact cacaccaccacacacggacgcagccacagaa cggcacacac chr16:88882182-88882682 - 63 1.03e-07 ACACAGC CACCCCCACGCACACAGCCACGCCCACGCAC ACAGCCACAC chr7:157880894-157881394 - 42 1.22e-07 CGTAATGATT CCTGTAAACACCTCCATCTCCACATACCCTC ATGACTTCAT chr1:3992025-3992525 - 14 1.86e-07 ACCTCTCCAT GACATCACCTCTCCCATGACATCATCTCCCC TTTGACATCA chr17:1293413-1293913 - 30 2.02e-07 CTCAACTCAT GACATCATCAAACCCAGCCCATGACATCATC AAACCCAACC chr19:4723769-4724269 + 38 3.27e-07 GACTTGGTAT CACTCAGTCAAACCCATGATCCCCCACTATT AAGGATATCC chr16:1342797-1343297 - 47 3.83e-07 GGCCCCCGAT GCCCCACTCGCTCACGCCCGCCCACATTCCC CGCCCACTCG chr2:241620259-241620759 - 31 4.13e-07 TCACTCACCC CTCACTCACTCCTCACTCACCCCTCACTCAC TCCTCACTCA chr22:35840392-35840892 - 58 4.13e-07 ATGGCGCTTG CCCCTCCCTACCTCCTCCCCCCTACACACAC ACACACACAC chr12:130584369-13058486 + 2 6.99e-07 C ACCACCATTACATCACCACCATTACATCACC ACTATCATGA chr6:169840137-169840637 + 40 7.51e-07 gaccacacca cgcccacacaccacacccacaacacgcccac tccacgccat chr12:132305303-13230580 + 9 9.32e-07 CTCACCCG GGCACAGCCTCACCCGGGCACACCCTCACCC GGGCACACCC chr11:69376929-69377429 + 69 1.00e-06 CCCACCCAGG AATGCCCACGCCCACCTGTGAACGCACACAC C chr6:30616929-30617429 + 15 1.23e-06 CAAATGAACC CATCCATCCCTATCCCGCTTCCCAGATCCAA CGCTCTCCGC chr1:228438217-228438717 + 27 1.62e-06 TTCAAAGGAT GCCACCCCTCTTCAAATGACACCACTCCCTC CCCAGATGAT chr5:141564101-141564601 + 41 1.73e-06 CTAACGTGAT GACATCACTACCAAACGCAACAATGACACAT CTAAAATAAA chr9:135967577-135968077 - 66 4.98e-06 ACAT ATACACAGTGCACACATATGCACACATGCAC ACAACACGCC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SACACMHMCWCACACMYVMCCACACACMCMC MEME-4 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr17:40476138-40476638 4.2e-17 55_[-4]_14 chr1:202204265-202204765 7.5e-15 4_[+4]_65 chr5:180594723-180595223 2e-14 [-4]_69 chr14:105562657-10556315 5.6e-13 4_[-4]_65 chr19:35947346-35947846 9.1e-12 69_[-4] chr1:202205553-202206053 9.1e-12 56_[+4]_13 chr21:44810816-44811316 1.2e-11 62_[+4]_7 chr11:133738487-13373898 2.2e-10 7_[-4]_62 chr17:80980358-80980858 1.6e-09 2_[-4]_67 chr19:54417022-54417522 2.3e-09 12_[+4]_57 chr17:21235874-21236374 3.6e-09 61_[+4]_8 chr17:82223968-82224468 9.5e-09 2_[+4]_67 chr3:194352476-194352976 1.6e-08 10_[-4]_59 chr17:74513943-74514443 2.9e-08 35_[-4]_34 chr1:226978484-226978984 3.8e-08 1_[+4]_68 chr10:1498846-1499346 4.2e-08 69_[+4] chr17:74514525-74515025 7.9e-08 63_[-4]_6 chr19:36604694-36605194 9.4e-08 42_[+4]_27 chr16:88882182-88882682 1e-07 62_[-4]_7 chr7:157880894-157881394 1.2e-07 41_[-4]_28 chr1:3992025-3992525 1.9e-07 13_[-4]_56 chr17:1293413-1293913 2e-07 29_[-4]_40 chr19:4723769-4724269 3.3e-07 37_[+4]_32 chr16:1342797-1343297 3.8e-07 46_[-4]_23 chr2:241620259-241620759 4.1e-07 30_[-4]_39 chr22:35840392-35840892 4.1e-07 57_[-4]_12 chr12:130584369-13058486 7e-07 1_[+4]_68 chr6:169840137-169840637 7.5e-07 39_[+4]_30 chr12:132305303-13230580 9.3e-07 8_[+4]_61 chr11:69376929-69377429 1e-06 68_[+4]_1 chr6:30616929-30617429 1.2e-06 14_[+4]_55 chr1:228438217-228438717 1.6e-06 26_[+4]_43 chr5:141564101-141564601 1.7e-06 40_[+4]_29 chr9:135967577-135968077 5e-06 65_[-4]_4 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SACACMHMCWCACACMYVMCCACACACMCMC MEME-4 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF SACACMHMCWCACACMYVMCCACACACMCMC width=31 seqs=34 chr17:40476138-40476638 ( 56) CACACACACACACACACACACACACACACAC 1 chr1:202204265-202204765 ( 5) CACACCTCCAAACACACCTCCACACACACAC 1 chr5:180594723-180595223 ( 1) CACATACCCTCACACACCCTCACACACACCC 1 chr14:105562657-10556315 ( 5) CACACACCCTCACACACCCCCTCACACCCTC 1 chr19:35947346-35947846 ( 70) GACTTCGACACACACACACACACACACACAC 1 chr1:202205553-202206053 ( 57) CCTTCATACACACACACCCCAACACACACAC 1 chr21:44810816-44811316 ( 63) CACACATGCACACACCCACATACACACACAT 1 chr11:133738487-13373898 ( 8) CACACACCCTCACACTCACCCACACCCCCCA 1 chr17:80980358-80980858 ( 3) CGCCCATTCACCCACCCACTCACCCACCCAC 1 chr19:54417022-54417522 ( 13) CTCACATGCACACACATATGCACAGGCACAC 1 chr17:21235874-21236374 ( 62) CACTCATCTGCCCACCCATCCATCCACCCAC 1 chr17:82223968-82224468 ( 3) GACACACCCCTACACCCGTGCACAGACACCT 1 chr3:194352476-194352976 ( 11) CACACATTTTCTCACACACTCTCATTCTACA 1 chr17:74513943-74514443 ( 36) GACATCACCCATCACATGACCACTCATCACA 1 chr1:226978484-226978984 ( 2) CACACACCTGCACACCTCCTTACATCTTCCA 1 chr10:1498846-1499346 ( 70) AACACTTATTCATCACTCATCACTCACTCAT 1 chr17:74514525-74515025 ( 64) GATATCACCCATCACATGACCACCCATCACA 1 chr19:36604694-36605194 ( 43) CACACCACCACACACGGACGCAGCCACAGAA 1 chr16:88882182-88882682 ( 63) CACCCCCACGCACACAGCCACGCCCACGCAC 1 chr7:157880894-157881394 ( 42) CCTGTAAACACCTCCATCTCCACATACCCTC 1 chr1:3992025-3992525 ( 14) GACATCACCTCTCCCATGACATCATCTCCCC 1 chr17:1293413-1293913 ( 30) GACATCATCAAACCCAGCCCATGACATCATC 1 chr19:4723769-4724269 ( 38) CACTCAGTCAAACCCATGATCCCCCACTATT 1 chr16:1342797-1343297 ( 47) GCCCCACTCGCTCACGCCCGCCCACATTCCC 1 chr2:241620259-241620759 ( 31) CTCACTCACTCCTCACTCACCCCTCACTCAC 1 chr22:35840392-35840892 ( 58) CCCCTCCCTACCTCCTCCCCCCTACACACAC 1 chr12:130584369-13058486 ( 2) ACCACCATTACATCACCACCATTACATCACC 1 chr6:169840137-169840637 ( 40) CGCCCACACACCACACCCACAACACGCCCAC 1 chr12:132305303-13230580 ( 9) GGCACAGCCTCACCCGGGCACACCCTCACCC 1 chr11:69376929-69377429 ( 69) AATGCCCACGCCCACCTGTGAACGCACACAC 1 chr6:30616929-30617429 ( 15) CATCCATCCCTATCCCGCTTCCCAGATCCAA 1 chr1:228438217-228438717 ( 27) GCCACCCCTCTTCAAATGACACCACTCCCTC 1 chr5:141564101-141564601 ( 41) GACATCACTACCAAACGCAACAATGACACAT 1 chr9:135967577-135968077 ( 66) ATACACAGTGCACACATATGCACACATGCAC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SACACMHMCWCACACMYVMCCACACACMCMC MEME-4 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 31 n= 42000 bayes= 11.6352 E= 1.6e-030 -68 92 -8 -1173 178 -82 -182 -109 -268 140 -1173 -36 171 -60 -240 -68 -268 118 -1173 49 149 40 -1173 -168 49 30 -182 49 49 60 -182 -10 -1173 124 -1173 49 123 -108 -82 32 -36 130 -1173 -109 164 -40 -1173 -10 -168 130 -1173 -10 184 5 -1173 -1173 -10 140 -1173 -1173 141 18 -182 -168 -1173 60 -82 90 78 50 -40 -1173 49 68 -1173 32 -10 50 -82 13 13 124 -1173 -168 178 -82 -340 -36 -268 140 -240 -109 178 -60 -340 -68 -1173 130 -140 -68 202 -182 -240 -109 -1173 124 -1173 49 102 30 -240 -10 -10 135 -340 -1173 149 5 -1173 -36 13 105 -1173 -36 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SACACMHMCWCACACMYVMCCACACACMCMC MEME-4 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 31 nsites= 34 E= 1.6e-030 0.117647 0.588235 0.294118 0.000000 0.647059 0.176471 0.088235 0.088235 0.029412 0.823529 0.000000 0.147059 0.617647 0.205882 0.058824 0.117647 0.029412 0.705882 0.000000 0.264706 0.529412 0.411765 0.000000 0.058824 0.264706 0.382353 0.088235 0.264706 0.264706 0.470588 0.088235 0.176471 0.000000 0.735294 0.000000 0.264706 0.441176 0.147059 0.176471 0.235294 0.147059 0.764706 0.000000 0.088235 0.588235 0.235294 0.000000 0.176471 0.058824 0.764706 0.000000 0.176471 0.676471 0.323529 0.000000 0.000000 0.176471 0.823529 0.000000 0.000000 0.500000 0.352941 0.088235 0.058824 0.000000 0.470588 0.176471 0.352941 0.323529 0.441176 0.235294 0.000000 0.264706 0.500000 0.000000 0.235294 0.176471 0.441176 0.176471 0.205882 0.205882 0.735294 0.000000 0.058824 0.647059 0.176471 0.029412 0.147059 0.029412 0.823529 0.058824 0.088235 0.647059 0.205882 0.029412 0.117647 0.000000 0.764706 0.117647 0.117647 0.764706 0.088235 0.058824 0.088235 0.000000 0.735294 0.000000 0.264706 0.382353 0.382353 0.058824 0.176471 0.176471 0.794118 0.029412 0.000000 0.529412 0.323529 0.000000 0.147059 0.205882 0.647059 0.000000 0.147059 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SACACMHMCWCACACMYVMCCACACACMCMC MEME-4 regular expression -------------------------------------------------------------------------------- [CG]AC[AC][CT][AC][CAT][CA][CT][AT]C[AC]C[AC]C[AC][CT][CAG][CAT][CT][CA]AC[AC]CA[CT][AC]C[AC][CA] -------------------------------------------------------------------------------- Time 1259.22 secs. ******************************************************************************** ******************************************************************************** MOTIF CYCCKCCTYYYCCTCC MEME-5 width = 16 sites = 63 llr = 652 E-value = 5.3e-013 ******************************************************************************** -------------------------------------------------------------------------------- Motif CYCCKCCTYYYCCTCC MEME-5 Description -------------------------------------------------------------------------------- Simplified A :::::::1:::::::1 pos.-specific C 7398:77266678:69 probability G 11::4:3:1::2::3: matrix T 261163:733411a1: bits 2.4 * 2.2 * 1.9 * 1.7 * Relative 1.4 * Entropy 1.2 * * * (14.9 bits) 1.0 **** * ** * 0.7 *********** ** * 0.5 **************** 0.2 **************** 0.0 ---------------- Multilevel CTCCTCCTCCCCCTCC consensus TC GTGCTTT G sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CYCCKCCTYYYCCTCC MEME-5 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ---------------- chr14:103520893-10352139 + 54 1.03e-09 CGGCCcctcc ctcctcctcctcctcc tcctcGCCGC chr12:12611654-12612154 - 70 3.35e-09 CCGCCGCCGC CTCCTCCTCCCCCTCC ATGACAGTCT chr3:14178244-14178744 + 23 5.28e-08 cgctctcacc ctcctcctcctcctcA CGCCGGGCCT chr6:110179723-110180223 - 57 2.78e-07 AAGCAGTGTT CTCTTCGTCCCCCTCC CCCAAACTGA chr17:45148340-45148840 - 10 4.42e-07 TTTTCCTCCC TCCCTCCTCCCCCTTC CCACAGCTC chr19:7871907-7872407 - 1 4.42e-07 CCTCTAGCCC CTCCTTCTCCCTCTGC chr1:203682709-203683209 + 76 5.12e-07 CCCCATCCTC TTCCTCCTCTCGCTGC CAGACTTCA chr1:31644869-31645369 + 35 5.90e-07 AGCGCTAATG TTCCTCCTTTTCCTGA GGTGGAGTGG chr1:25998135-25998635 + 51 9.21e-07 GTGCGTAACC CTCCGCCTCACCCTCC TCAAATAGTC chr3:9749845-9750345 - 80 1.20e-06 CTTAA TTCCTCCACCTCCTGC ATGCCTCGCC chr10:42782462-42782962 + 78 1.38e-06 TTTTTTCTGC CTTCTTGTTTCCCTCC GGCGAGT chr14:91060388-91060888 + 17 1.57e-06 GCTCGCTCCT CGCCTCCTCCCCCTTC GGCGGGCACC chr1:235504255-235504755 + 66 1.57e-06 CTCCCACTCG CCCCGCCCTCTCCTCC CGCGTTTCCA chr12:57752241-57752741 - 16 1.78e-06 CCCCCTTACA CTCTTCGCCCTCCTCC CAGTCGAAGC chr12:389106-389606 + 85 1.78e-06 CTGGCCTTTC CTTCTTCTTCTCTTCC chr19:47778292-47778792 - 47 2.58e-06 CCACACAAGT CTCCTTCCCATCCTCC TGTTGGGCTG chr19:42133025-42133525 + 80 2.58e-06 GAGAAGGGAG cccctccctccgctcc cctcc chr12:57112053-57112553 - 72 2.58e-06 ATCCCTTGGT CTCCTCCAGCTCCTCC CCCAGCAAAA chr8:18083983-18084483 - 31 2.91e-06 CACTGAAAAG CCCCGTCCTCTCCTCC CAGTCCCGCC chr19:54190132-54190632 - 79 2.91e-06 GTCCGC CTCCTTGCCTCCCTTC AGAATGTCCC chr3:194672340-194672840 - 5 2.91e-06 TCCTCCGAGT CTCCGCGTCCTCCTGA CGGA chr19:12840495-12840995 - 57 3.26e-06 TCAGGTACGA CTCCTCCTTTCTGTCC GTCCCACCTG chr7:100081507-100082007 + 32 3.66e-06 ACGGAAGTTC CCCCTCGTTTCGCTTC CGGGTCGGTT chr15:49046302-49046802 - 73 4.10e-06 TGCCTCCTCC CCACTCCTTTTCCTTC CGTGCGCCTC chr19:55643343-55643843 + 83 4.59e-06 TTCCCTAGAC CCTCTTCTCTCCCTTC GG chr15:99565603-99566103 - 59 5.12e-06 TCCGCAGCCC TGCCTCCCCTCCCTCC TGGGTTCCCT chr12:132828692-13282919 + 56 5.69e-06 AACAGAGAAC GTCCTCCTCTTCTTCA AGTGGCCACC chr10:93702438-93702938 - 66 5.69e-06 AGCTGGAAGC CTCTTCGTCCCTTTCC GGGCCGTTTC chr5:176388744-176389244 - 76 5.69e-06 GGTCCTTCT CTACTTCCTTCCCTCC GACATCACTG chr16:58129313-58129813 + 2 5.69e-06 G TCCCGCCTCCTCCTGA AAAGAGCTCA chr16:31179764-31180264 + 82 6.33e-06 CGGAGTGCGT TCCTGCCTCCCCCTGC TCT chr18:62522579-62523079 + 34 6.33e-06 CACGGCCCCA GCCCGCGTCCTCCTCC TGCCGAGCAC chr1:26692821-26693321 + 65 7.03e-06 CGCCCAGAAA CTCCGCCTGATCCTCC AGGCCTCAAA chr10:72354648-72355148 - 74 7.03e-06 CCTTCGCTCG CCCGGCCTCCCCCTCC CTGGTTCCGC chr6:159726800-159727300 + 48 7.03e-06 CGGCGAGTAC TTCCACCTTCCCTTCC CGTGATGCCC chr17:4703742-4704242 - 58 7.80e-06 GGGCCCGCGG CTCCGCCTGCTGCTGC TGGAGAGTGT chr19:2945134-2945634 - 5 8.63e-06 GGGACTCCGT GCCCTTCCTCTCCTCC CCGC chr20:45891023-45891523 - 48 9.52e-06 CGTGACAGTC TTCCTCCCGCCCCTTC TTTGGTCCCT chr18:12377198-12377698 - 32 9.52e-06 TCGGCCCGGT CCCCGCCTCTAGCTCC CCCTTGCCCT chr17:8120792-8121292 + 71 9.52e-06 AAGGCCCCCA TCCCTTCTCCCCCTAC CCTATCTCTC chr19:42325345-42325845 + 84 1.05e-05 GCCCAAGCGT CCCCTCGTCTCTCTGA T chr15:65792133-65792633 - 28 1.16e-05 CGACCCTCAA CTCGGCCCTCTCCTCC CACTCGGGCC chr1:108746419-108746919 - 26 1.27e-05 GTTGGGGTGG CCCCGCCCCTTGCTGC AGGGGAATGC chr14:103921400-10392190 - 57 1.27e-05 CGCACCCTCT CCCCGCCCCTTCTTGC CTGCGACACC chr19:43463557-43464057 - 17 1.40e-05 AGCTAATCCC GCCCTTGTCCCTCTCC CTAGTCCACG chr16:21599270-21599770 - 65 1.40e-05 GCCTCGGCAC CTCCCCCTTCCCTTCC GGCCGCGGAA chr19:35557995-35558495 - 27 1.53e-05 CCAAACCCCA CCCCATCTCCCGCTCC GCCTATGGCC chr19:17337092-17337592 + 3 1.53e-05 AA CTCTGTCCTTTCTTCC ATTCCTTATT chr10:102743415-10274391 + 74 1.53e-05 ATGAAGCTGC TTCCGCCACTCTCTGC GGGTTGGGAC chr2:96638145-96638645 - 57 1.53e-05 CTTTGCCGCT CACCGCCTCTCCCTTC CCAGGCCGTA chr1:151282155-151282655 - 29 1.53e-05 CCAGGCACGC TTACTTGTTCCGCTCC TGGTGCGGGC chr17:996840-997340 - 66 1.53e-05 CCCAAGCAAC CCTCGCGTCCTTCTCC CCGCAGCAGA chr19:41706699-41707199 + 44 1.68e-05 CTCGGCCCAC GTcctcctcgccctcc gagctcctca chr17:42998034-42998534 + 62 1.68e-05 AGCTGCCGCG CCCTGCGTTTCCCTCA TGAGCTTCTT chr2:47176405-47176905 - 65 2.01e-05 TTCGCCCACT TTCCTTGATCTCTTGC CTCATCGACC chr20:58650942-58651442 - 60 2.38e-05 CCCCCTGGCC CTCTTCCTGTCCGTCC CTCGCGAGTG chr1:151540161-151540661 - 7 2.82e-05 GGTACACCAG TTCCGCGTCCCGTTCA TCTTCC chr6:143450498-143450998 - 9 3.06e-05 GTCCCGGGCC CGCCGCGTTCCGCTGC CCGCGCTC chr16:740917-741417 + 52 3.06e-05 CGGGACCTAC CGCTTCGTCCACCTCC CGCGCGCCCC chr6:87155346-87155846 - 51 3.06e-05 ACCTCTCCTG CTCGGCCTCTTCGTCC GCCATCTTCA chr1:171741866-171742366 - 56 3.31e-05 GCGGATCGAC TTCCTCGATTATCTCC GTGCCCTGGA chr7:103074628-103075128 + 57 3.31e-05 CGTGGCACCG CCCCGCGCTCCGCTGC CAGGGGCGGG chr1:228139855-228140355 - 8 4.20e-05 CCTCCCAGCC CGTCTTCTCCCGCTGC GTCACAG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CYCCKCCTYYYCCTCC MEME-5 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr14:103520893-10352139 1e-09 53_[+5]_31 chr12:12611654-12612154 3.3e-09 69_[-5]_15 chr3:14178244-14178744 5.3e-08 22_[+5]_62 chr6:110179723-110180223 2.8e-07 56_[-5]_28 chr17:45148340-45148840 4.4e-07 9_[-5]_75 chr19:7871907-7872407 4.4e-07 [-5]_84 chr1:203682709-203683209 5.1e-07 75_[+5]_9 chr1:31644869-31645369 5.9e-07 34_[+5]_50 chr1:25998135-25998635 9.2e-07 50_[+5]_34 chr3:9749845-9750345 1.2e-06 79_[-5]_5 chr10:42782462-42782962 1.4e-06 77_[+5]_7 chr14:91060388-91060888 1.6e-06 16_[+5]_68 chr1:235504255-235504755 1.6e-06 65_[+5]_19 chr12:57752241-57752741 1.8e-06 15_[-5]_69 chr12:389106-389606 1.8e-06 84_[+5] chr19:47778292-47778792 2.6e-06 46_[-5]_38 chr19:42133025-42133525 2.6e-06 79_[+5]_5 chr12:57112053-57112553 2.6e-06 71_[-5]_13 chr8:18083983-18084483 2.9e-06 30_[-5]_54 chr19:54190132-54190632 2.9e-06 78_[-5]_6 chr3:194672340-194672840 2.9e-06 4_[-5]_80 chr19:12840495-12840995 3.3e-06 56_[-5]_28 chr7:100081507-100082007 3.7e-06 31_[+5]_53 chr15:49046302-49046802 4.1e-06 72_[-5]_12 chr19:55643343-55643843 4.6e-06 82_[+5]_2 chr15:99565603-99566103 5.1e-06 58_[-5]_26 chr12:132828692-13282919 5.7e-06 55_[+5]_29 chr10:93702438-93702938 5.7e-06 65_[-5]_19 chr5:176388744-176389244 5.7e-06 75_[-5]_9 chr16:58129313-58129813 5.7e-06 1_[+5]_83 chr16:31179764-31180264 6.3e-06 81_[+5]_3 chr18:62522579-62523079 6.3e-06 33_[+5]_51 chr1:26692821-26693321 7e-06 64_[+5]_20 chr10:72354648-72355148 7e-06 73_[-5]_11 chr6:159726800-159727300 7e-06 47_[+5]_37 chr17:4703742-4704242 7.8e-06 57_[-5]_27 chr19:2945134-2945634 8.6e-06 4_[-5]_80 chr20:45891023-45891523 9.5e-06 47_[-5]_37 chr18:12377198-12377698 9.5e-06 31_[-5]_53 chr17:8120792-8121292 9.5e-06 70_[+5]_14 chr19:42325345-42325845 1.1e-05 83_[+5]_1 chr15:65792133-65792633 1.2e-05 27_[-5]_57 chr1:108746419-108746919 1.3e-05 25_[-5]_59 chr14:103921400-10392190 1.3e-05 56_[-5]_28 chr19:43463557-43464057 1.4e-05 16_[-5]_68 chr16:21599270-21599770 1.4e-05 64_[-5]_20 chr19:35557995-35558495 1.5e-05 26_[-5]_58 chr19:17337092-17337592 1.5e-05 2_[+5]_82 chr10:102743415-10274391 1.5e-05 73_[+5]_11 chr2:96638145-96638645 1.5e-05 56_[-5]_28 chr1:151282155-151282655 1.5e-05 28_[-5]_56 chr17:996840-997340 1.5e-05 65_[-5]_19 chr19:41706699-41707199 1.7e-05 43_[+5]_41 chr17:42998034-42998534 1.7e-05 61_[+5]_23 chr2:47176405-47176905 2e-05 64_[-5]_20 chr20:58650942-58651442 2.4e-05 59_[-5]_25 chr1:151540161-151540661 2.8e-05 6_[-5]_78 chr6:143450498-143450998 3.1e-05 8_[-5]_76 chr16:740917-741417 3.1e-05 51_[+5]_33 chr6:87155346-87155846 3.1e-05 50_[-5]_34 chr1:171741866-171742366 3.3e-05 55_[-5]_29 chr7:103074628-103075128 3.3e-05 56_[+5]_28 chr1:228139855-228140355 4.2e-05 7_[-5]_77 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CYCCKCCTYYYCCTCC MEME-5 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CYCCKCCTYYYCCTCC width=16 seqs=63 chr14:103520893-10352139 ( 54) CTCCTCCTCCTCCTCC 1 chr12:12611654-12612154 ( 70) CTCCTCCTCCCCCTCC 1 chr3:14178244-14178744 ( 23) CTCCTCCTCCTCCTCA 1 chr6:110179723-110180223 ( 57) CTCTTCGTCCCCCTCC 1 chr17:45148340-45148840 ( 10) TCCCTCCTCCCCCTTC 1 chr19:7871907-7872407 ( 1) CTCCTTCTCCCTCTGC 1 chr1:203682709-203683209 ( 76) TTCCTCCTCTCGCTGC 1 chr1:31644869-31645369 ( 35) TTCCTCCTTTTCCTGA 1 chr1:25998135-25998635 ( 51) CTCCGCCTCACCCTCC 1 chr3:9749845-9750345 ( 80) TTCCTCCACCTCCTGC 1 chr10:42782462-42782962 ( 78) CTTCTTGTTTCCCTCC 1 chr14:91060388-91060888 ( 17) CGCCTCCTCCCCCTTC 1 chr1:235504255-235504755 ( 66) CCCCGCCCTCTCCTCC 1 chr12:57752241-57752741 ( 16) CTCTTCGCCCTCCTCC 1 chr12:389106-389606 ( 85) CTTCTTCTTCTCTTCC 1 chr19:47778292-47778792 ( 47) CTCCTTCCCATCCTCC 1 chr19:42133025-42133525 ( 80) CCCCTCCCTCCGCTCC 1 chr12:57112053-57112553 ( 72) CTCCTCCAGCTCCTCC 1 chr8:18083983-18084483 ( 31) CCCCGTCCTCTCCTCC 1 chr19:54190132-54190632 ( 79) CTCCTTGCCTCCCTTC 1 chr3:194672340-194672840 ( 5) CTCCGCGTCCTCCTGA 1 chr19:12840495-12840995 ( 57) CTCCTCCTTTCTGTCC 1 chr7:100081507-100082007 ( 32) CCCCTCGTTTCGCTTC 1 chr15:49046302-49046802 ( 73) CCACTCCTTTTCCTTC 1 chr19:55643343-55643843 ( 83) CCTCTTCTCTCCCTTC 1 chr15:99565603-99566103 ( 59) TGCCTCCCCTCCCTCC 1 chr12:132828692-13282919 ( 56) GTCCTCCTCTTCTTCA 1 chr10:93702438-93702938 ( 66) CTCTTCGTCCCTTTCC 1 chr5:176388744-176389244 ( 76) CTACTTCCTTCCCTCC 1 chr16:58129313-58129813 ( 2) TCCCGCCTCCTCCTGA 1 chr16:31179764-31180264 ( 82) TCCTGCCTCCCCCTGC 1 chr18:62522579-62523079 ( 34) GCCCGCGTCCTCCTCC 1 chr1:26692821-26693321 ( 65) CTCCGCCTGATCCTCC 1 chr10:72354648-72355148 ( 74) CCCGGCCTCCCCCTCC 1 chr6:159726800-159727300 ( 48) TTCCACCTTCCCTTCC 1 chr17:4703742-4704242 ( 58) CTCCGCCTGCTGCTGC 1 chr19:2945134-2945634 ( 5) GCCCTTCCTCTCCTCC 1 chr20:45891023-45891523 ( 48) TTCCTCCCGCCCCTTC 1 chr18:12377198-12377698 ( 32) CCCCGCCTCTAGCTCC 1 chr17:8120792-8121292 ( 71) TCCCTTCTCCCCCTAC 1 chr19:42325345-42325845 ( 84) CCCCTCGTCTCTCTGA 1 chr15:65792133-65792633 ( 28) CTCGGCCCTCTCCTCC 1 chr1:108746419-108746919 ( 26) CCCCGCCCCTTGCTGC 1 chr14:103921400-10392190 ( 57) CCCCGCCCCTTCTTGC 1 chr19:43463557-43464057 ( 17) GCCCTTGTCCCTCTCC 1 chr16:21599270-21599770 ( 65) CTCCCCCTTCCCTTCC 1 chr19:35557995-35558495 ( 27) CCCCATCTCCCGCTCC 1 chr19:17337092-17337592 ( 3) CTCTGTCCTTTCTTCC 1 chr10:102743415-10274391 ( 74) TTCCGCCACTCTCTGC 1 chr2:96638145-96638645 ( 57) CACCGCCTCTCCCTTC 1 chr1:151282155-151282655 ( 29) TTACTTGTTCCGCTCC 1 chr17:996840-997340 ( 66) CCTCGCGTCCTTCTCC 1 chr19:41706699-41707199 ( 44) GTCCTCCTCGCCCTCC 1 chr17:42998034-42998534 ( 62) CCCTGCGTTTCCCTCA 1 chr2:47176405-47176905 ( 65) TTCCTTGATCTCTTGC 1 chr20:58650942-58651442 ( 60) CTCTTCCTGTCCGTCC 1 chr1:151540161-151540661 ( 7) TTCCGCGTCCCGTTCA 1 chr6:143450498-143450998 ( 9) CGCCGCGTTCCGCTGC 1 chr16:740917-741417 ( 52) CGCTTCGTCCACCTCC 1 chr6:87155346-87155846 ( 51) CTCGGCCTCTTCGTCC 1 chr1:171741866-171742366 ( 56) TTCCTCGATTATCTCC 1 chr7:103074628-103075128 ( 57) CCCCGCGCTCCGCTGC 1 chr1:228139855-228140355 ( 8) CGTCTTCTCCCGCTGC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CYCCKCCTYYYCCTCC MEME-5 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 16 n= 51000 bayes= 10.9707 E= 5.3e-013 -1262 113 -197 34 -357 16 -197 156 -198 149 -1262 -125 -1262 141 -271 -57 -257 -429 23 164 -1262 126 -1262 43 -1262 116 -5 -1262 -125 -39 -1262 186 -1262 91 -197 82 -198 91 -429 89 -198 83 -1262 107 -1262 113 -71 -57 -1262 138 -271 -40 -1262 -1262 -1262 241 -357 95 -29 -57 -57 149 -1262 -1262 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CYCCKCCTYYYCCTCC MEME-5 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 16 nsites= 63 E= 5.3e-013 0.000000 0.682540 0.079365 0.238095 0.015873 0.349206 0.079365 0.555556 0.047619 0.873016 0.000000 0.079365 0.000000 0.825397 0.047619 0.126984 0.031746 0.015873 0.365079 0.587302 0.000000 0.746032 0.000000 0.253968 0.000000 0.698413 0.301587 0.000000 0.079365 0.238095 0.000000 0.682540 0.000000 0.587302 0.079365 0.333333 0.047619 0.587302 0.015873 0.349206 0.047619 0.555556 0.000000 0.396825 0.000000 0.682540 0.190476 0.126984 0.000000 0.809524 0.047619 0.142857 0.000000 0.000000 0.000000 1.000000 0.015873 0.603175 0.253968 0.126984 0.126984 0.873016 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CYCCKCCTYYYCCTCC MEME-5 regular expression -------------------------------------------------------------------------------- [CT][TC]CC[TG][CT][CG][TC][CT][CT][CT]CCT[CG]C -------------------------------------------------------------------------------- Time 1527.01 secs. ******************************************************************************** ******************************************************************************** MOTIF GGCCMCGCCCCY MEME-6 width = 12 sites = 80 llr = 749 E-value = 2.4e-012 ******************************************************************************** -------------------------------------------------------------------------------- Motif GGCCMCGCCCCY MEME-6 Description -------------------------------------------------------------------------------- Simplified A 211:4:::::32 pos.-specific C 2:895a:aa974 probability G 691:::a::::2 matrix T 1:11:::::1:2 bits 2.4 2.2 1.9 1.7 **** Relative 1.4 **** Entropy 1.2 * * ***** (13.5 bits) 1.0 * ******** 0.7 ********** 0.5 ********** 0.2 *********** 0.0 ------------ Multilevel GGCCCCGCCCCC consensus A AT sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGCCMCGCCCCY MEME-6 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ------------ chr9:113401128-113401628 + 17 5.13e-07 CCACAGTCCA GGCCACGCCCCC TGAAGGCGGT chr6:170160306-170160806 - 17 5.13e-07 CCACCTGCCT GGCCACGCCCCC GGAAGGCAGC chr19:17293879-17294379 + 67 1.13e-06 AGCAACTAGA GGCCACGCCCAC CCGGCAGCCA chr4:4673001-4673501 + 88 1.13e-06 tcccattcca ggccacgcccac c chr19:49867364-49867864 - 33 2.17e-06 GAGGAGGCCA GGCCCCGCCCCC CACCCACGAG chr4:88456812-88457312 + 56 2.17e-06 TGGAGCTGCA GGCCCCGCCCCC AAACAGCACG chr19:7871907-7872407 - 64 2.99e-06 CCACCCTGCC GGCCACGCCCCA CTCGTCGAGC chr10:5889817-5890317 - 21 2.99e-06 ACAGCTACCG GGCCACGCCCCA TCCGCGCTTC chr9:136342690-136343190 - 19 2.99e-06 ACAACAGCAA GGCCACGCCCCA CCGCGTCCCC chr19:12840495-12840995 - 82 2.99e-06 CTGGGAT GGCCCCGCCCCT CAGGTACGAC chr19:43463557-43464057 - 60 2.99e-06 CCCAACTCTG GGCCACGCCCCA TCTGAGACCA chr1:33181900-33182400 - 38 2.99e-06 ACCGGCTGGT GGCCCCGCCCCT CCCCCGCCCG chr17:28728486-28728986 - 54 2.99e-06 ACCCACTCTG GGCCCCGCCCCT TCACGGCGAG chr7:1718963-1719463 + 44 3.50e-06 CCACCAACAG GGCCCCGCCCAC CAACAGGACC chr1:228109140-228109640 - 46 5.62e-06 ACGCCGCGCC GGCCCCGCCCAA CAGGGGCGTA chr6:33571110-33571610 + 73 5.62e-06 GCGCCCCAAA GGCCCCGCCCAA GGAAGGGCAC chr1:15246916-15247416 + 38 5.62e-06 CCCTGCACGG TGCCACGCCCCC TCTGCCGCGC chr19:8922495-8922995 - 51 5.99e-06 TACTGATGCC AGCCACGCCCAC CTTTCCCTGC chr19:35879735-35880235 - 1 7.83e-06 CTGGCCTCTG AGCCCCGCCCCC chr19:50384041-50384541 - 15 7.83e-06 GTGCGGGCAA GGCCACGCCCCG CTTGTTCGAC chr17:48830768-48831268 + 50 7.83e-06 TTGGGTGCTT AGCCCCGCCCCC GTCCCACTCT chr10:132752267-13275276 - 72 9.26e-06 CACACCTCCT CGCCACGCCCCT CCACGCCACA chr5:177497415-177497915 - 29 9.26e-06 CGTGGCCTGG TGCCCCGCCCCC GTCCGCGCGC chr17:64975383-64975883 + 37 9.26e-06 cgcccactgg cgccacgcccct tcgcgccgcg chr12:6662702-6663202 + 1 9.26e-06 . TGCCCCGCCCCC TCTTTCTCCG chr17:17206273-17206773 + 49 1.07e-05 ccacgtgcca ggccacgCCCAG CACCCATGGC chr19:6677828-6678328 - 33 1.07e-05 CACGCCCCTG CGCCACGCCCAC ACCACGCCCC chr6:6686927-6687427 + 89 1.07e-05 CCTGGCTGGG AGCCCCGCCCAC chr6:69796801-69797301 - 85 1.46e-05 CACG CGCCCCGCCCCT GAGCAGTCCT chr7:75914819-75915319 - 34 1.59e-05 ATTGGGCCGC CGCCCCGCCCAC TCGAGCCGCG chr16:75432962-75433462 - 83 1.59e-05 GCGAAT TGCCCCGCCCCA CGCCTCACGT chr19:35903637-35904137 + 54 1.72e-05 CCCACGCCGC AGCCCCGCCCAA GGTGAGGGCG chr19:55643343-55643843 + 54 1.86e-05 ACGGCCCGGG CGCCCCGCCCCA ACCTTCCTTC chr2:241881440-241881940 - 69 1.86e-05 TCACACGCGT GACCACGCCCCT TAGTCTCCTC chr12:121839367-12183986 - 14 1.86e-05 CGCCCACACT GACCACGCCCCT CGGCGGGGCC chr12:53938345-53938845 + 56 1.86e-05 TTTTCCCTTT CGCCCCGCCCCA CCTCGAGGGG chr19:8592368-8592868 - 41 1.95e-05 CCTCGGCTGT GGCCACGCCTAC TGCTTGCTCC chr4:731282-731782 - 88 1.95e-05 G GACCACGCCCAC CCACGACGGG chr19:2335256-2335756 + 54 2.18e-05 GCATCCCTCA GGCCCCGCCTCC TTTCTCACTT chr18:80033805-80034305 + 5 2.18e-05 TCTT CGCCCCGCCCAA CCACCGCCCG chr3:132417051-132417551 - 2 2.38e-05 GTGCTGAAAA GGACACGCCCCT G chr11:72223089-72223589 + 71 2.38e-05 CCCTTTTATG GGCTCCGCCCCC TTTGCGGCTG chr19:35869574-35870074 - 56 2.38e-05 TTCTATGGGC GGCCCCGCCTCT CCCGTTCGGC chr19:11346420-11346920 - 60 2.38e-05 TCATCATCCT GGCTCCGCCCCC TGGGTTGTGA chr5:139403659-139404159 + 49 2.38e-05 TGAGGCATCC GGCCCCGCCTCT CCCCAAACTC chr19:6767420-6767920 + 52 2.63e-05 TTTCTCCATA GACCCCGCCCAC TAGGGGAGCA chr5:173056941-173057441 - 3 2.63e-05 CAGCTCTGAG GGCTCCGCCCCT CA chr19:40798656-40799156 + 33 2.92e-05 ATCATTTGCG TGCCCCGCCCCG CCGACGCCAC chr1:235504255-235504755 + 39 2.92e-05 CCTTCCCACC GGCTCCGCCCAC CTTTTCTCCC chr2:219552489-219552989 - 33 2.92e-05 AACTGCCCTC TGCCCCGCCCCG CTCACGCCCC chr10:101830475-10183097 + 49 3.17e-05 CGCAGGCCTG GGGCACGCCCCT CCCCCACACG chr7:876170-876670 + 79 3.17e-05 TGTTGCCTGC GGACCCGCCCCT GGGTCACGTG chr6:34888938-34889438 + 46 3.17e-05 TGGTCCGCGG AGCCCCGCCCAG CTAGGTGAGC chr12:52023584-52024084 - 29 3.17e-05 CCCCCTACCA GGACCCGCCCCT TTGCAGCGGG chr19:7870602-7871102 - 4 3.44e-05 CCTCTTCCAT AGCCACGCCTCC TCC chr1:92080231-92080731 - 82 3.44e-05 CCTCACT TGCCCCGCCCAG GAGGAAGAAG chr17:42181064-42181564 + 40 3.44e-05 AGAGAATTCG GGGCACGCCCAC CGGGAGGGGA chr19:3573851-3574351 + 43 4.06e-05 TCCAGCAGAA AACCACGCCCAC CAAGCAGAGG chr16:70800932-70801432 + 62 4.06e-05 TCCGTCGCGA GGGCCCGCCCCT CTCCAGCCAC chr19:8525510-8526010 + 13 4.45e-05 CCCACTAATT GGCCTCGCCCCC CAAGGGCCCA chr19:55624405-55624905 - 59 4.45e-05 CCCCCTGCTG CACCACGCCCCC TCGCAGCCCC chrX:15737879-15738379 - 71 4.89e-05 TTATTGCCCC GGTCACGCCCAA CCAAACTGTG chr19:17202251-17202751 + 83 4.89e-05 acccatgcca tgccacgcctat gacatg chr12:1907471-1907971 - 68 5.29e-05 CACACCCACC AGACACGCCCAC CAGGCACGCC chr19:35643368-35643868 - 14 5.29e-05 CCGGGCCCGC GGGCCCGCCCCA CGAAATGGTA chr12:64759205-64759705 - 39 5.29e-05 CCGCGCAGCG TGCTCCGCCCCC TGTCCCTGGC chr1:154973605-154974105 - 48 5.29e-05 AATTTGTTGA AGCTCCGCCCCT CCGAAGCCAC chr9:137423034-137423534 - 56 5.29e-05 CAGACCCTCA GGCCTCGCCCAC CTCCCATTCG chr19:48321769-48322269 + 84 5.85e-05 TCGCTCTGTA AGGCACGCCCCC TCCGC chr19:33521613-33522113 - 12 6.81e-05 GCCCCGCCCT TACCCCGCCCCA TGCATTGGCA chr1:175023211-175023711 - 83 6.81e-05 CCTCCC AGCTCCGCCCCA GGCGGCCCAG chr9:137156920-137157420 - 53 6.81e-05 CCCTAAGAGC GGCCCCGCCTAG TCCTGAGAGC chr10:50067621-50068121 + 85 7.49e-05 ACGTGAGGCC GGTCACGCCCCG GGCA chr10:45726944-45727444 + 74 7.49e-05 ACGTGAGGCC GGTCACGCCCCG GGCAGCTTGG chr6:166956332-166956832 + 74 7.49e-05 GCCCCCAGGA CGGCACGCCCCC GCCGGTGGAC chr17:68457513-68458013 + 65 8.00e-05 GCCCGGCTGG CGACCCGCCCCT GGCTTCGTAA chr19:43475186-43475686 - 10 9.18e-05 CCCCCTGAGT GGCCCCGCCCTC TTGGGGGGA chr15:84980629-84981129 - 75 1.04e-04 AAACCTGGCG CGCCACGCCTCG GATTACACAG chr4:3074159-3074659 + 80 1.04e-04 ATTACAGTCT CACCACGCCCCG TCCCCTCTC chr6:149963608-149964108 - 77 1.40e-04 TGCTCCACCC CGTCACGCCCCG GGCTCGTCAT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGCCMCGCCCCY MEME-6 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr9:113401128-113401628 5.1e-07 16_[+6]_72 chr6:170160306-170160806 5.1e-07 16_[-6]_72 chr19:17293879-17294379 1.1e-06 66_[+6]_22 chr4:4673001-4673501 1.1e-06 87_[+6]_1 chr19:49867364-49867864 2.2e-06 32_[-6]_56 chr4:88456812-88457312 2.2e-06 55_[+6]_33 chr19:7871907-7872407 3e-06 63_[-6]_25 chr10:5889817-5890317 3e-06 20_[-6]_68 chr9:136342690-136343190 3e-06 18_[-6]_70 chr19:12840495-12840995 3e-06 81_[-6]_7 chr19:43463557-43464057 3e-06 59_[-6]_29 chr1:33181900-33182400 3e-06 37_[-6]_51 chr17:28728486-28728986 3e-06 53_[-6]_35 chr7:1718963-1719463 3.5e-06 43_[+6]_45 chr1:228109140-228109640 5.6e-06 45_[-6]_43 chr6:33571110-33571610 5.6e-06 72_[+6]_16 chr1:15246916-15247416 5.6e-06 37_[+6]_51 chr19:8922495-8922995 6e-06 50_[-6]_38 chr19:35879735-35880235 7.8e-06 [-6]_88 chr19:50384041-50384541 7.8e-06 14_[-6]_74 chr17:48830768-48831268 7.8e-06 49_[+6]_39 chr10:132752267-13275276 9.3e-06 71_[-6]_17 chr5:177497415-177497915 9.3e-06 28_[-6]_60 chr17:64975383-64975883 9.3e-06 36_[+6]_52 chr12:6662702-6663202 9.3e-06 [+6]_88 chr17:17206273-17206773 1.1e-05 48_[+6]_40 chr19:6677828-6678328 1.1e-05 32_[-6]_56 chr6:6686927-6687427 1.1e-05 88_[+6] chr6:69796801-69797301 1.5e-05 84_[-6]_4 chr7:75914819-75915319 1.6e-05 33_[-6]_55 chr16:75432962-75433462 1.6e-05 82_[-6]_6 chr19:35903637-35904137 1.7e-05 53_[+6]_35 chr19:55643343-55643843 1.9e-05 53_[+6]_35 chr2:241881440-241881940 1.9e-05 68_[-6]_20 chr12:121839367-12183986 1.9e-05 13_[-6]_75 chr12:53938345-53938845 1.9e-05 55_[+6]_33 chr19:8592368-8592868 1.9e-05 40_[-6]_48 chr4:731282-731782 1.9e-05 87_[-6]_1 chr19:2335256-2335756 2.2e-05 53_[+6]_35 chr18:80033805-80034305 2.2e-05 4_[+6]_84 chr3:132417051-132417551 2.4e-05 1_[-6]_87 chr11:72223089-72223589 2.4e-05 70_[+6]_18 chr19:35869574-35870074 2.4e-05 55_[-6]_33 chr19:11346420-11346920 2.4e-05 59_[-6]_29 chr5:139403659-139404159 2.4e-05 48_[+6]_40 chr19:6767420-6767920 2.6e-05 51_[+6]_37 chr5:173056941-173057441 2.6e-05 2_[-6]_86 chr19:40798656-40799156 2.9e-05 32_[+6]_56 chr1:235504255-235504755 2.9e-05 38_[+6]_50 chr2:219552489-219552989 2.9e-05 32_[-6]_56 chr10:101830475-10183097 3.2e-05 48_[+6]_40 chr7:876170-876670 3.2e-05 78_[+6]_10 chr6:34888938-34889438 3.2e-05 45_[+6]_43 chr12:52023584-52024084 3.2e-05 28_[-6]_60 chr19:7870602-7871102 3.4e-05 3_[-6]_85 chr1:92080231-92080731 3.4e-05 81_[-6]_7 chr17:42181064-42181564 3.4e-05 39_[+6]_49 chr19:3573851-3574351 4.1e-05 42_[+6]_46 chr16:70800932-70801432 4.1e-05 61_[+6]_27 chr19:8525510-8526010 4.5e-05 12_[+6]_76 chr19:55624405-55624905 4.5e-05 58_[-6]_30 chrX:15737879-15738379 4.9e-05 70_[-6]_18 chr19:17202251-17202751 4.9e-05 82_[+6]_6 chr12:1907471-1907971 5.3e-05 67_[-6]_21 chr19:35643368-35643868 5.3e-05 13_[-6]_75 chr12:64759205-64759705 5.3e-05 38_[-6]_50 chr1:154973605-154974105 5.3e-05 47_[-6]_41 chr9:137423034-137423534 5.3e-05 55_[-6]_33 chr19:48321769-48322269 5.9e-05 83_[+6]_5 chr19:33521613-33522113 6.8e-05 11_[-6]_77 chr1:175023211-175023711 6.8e-05 82_[-6]_6 chr9:137156920-137157420 6.8e-05 52_[-6]_36 chr10:50067621-50068121 7.5e-05 84_[+6]_4 chr10:45726944-45727444 7.5e-05 73_[+6]_15 chr6:166956332-166956832 7.5e-05 73_[+6]_15 chr17:68457513-68458013 8e-05 64_[+6]_24 chr19:43475186-43475686 9.2e-05 9_[-6]_79 chr15:84980629-84981129 0.0001 74_[-6]_14 chr4:3074159-3074659 0.0001 79_[+6]_9 chr6:149963608-149964108 0.00014 76_[-6]_12 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGCCMCGCCCCY MEME-6 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF GGCCMCGCCCCY width=12 seqs=80 chr9:113401128-113401628 ( 17) GGCCACGCCCCC 1 chr6:170160306-170160806 ( 17) GGCCACGCCCCC 1 chr19:17293879-17294379 ( 67) GGCCACGCCCAC 1 chr4:4673001-4673501 ( 88) GGCCACGCCCAC 1 chr19:49867364-49867864 ( 33) GGCCCCGCCCCC 1 chr4:88456812-88457312 ( 56) GGCCCCGCCCCC 1 chr19:7871907-7872407 ( 64) GGCCACGCCCCA 1 chr10:5889817-5890317 ( 21) GGCCACGCCCCA 1 chr9:136342690-136343190 ( 19) GGCCACGCCCCA 1 chr19:12840495-12840995 ( 82) GGCCCCGCCCCT 1 chr19:43463557-43464057 ( 60) GGCCACGCCCCA 1 chr1:33181900-33182400 ( 38) GGCCCCGCCCCT 1 chr17:28728486-28728986 ( 54) GGCCCCGCCCCT 1 chr7:1718963-1719463 ( 44) GGCCCCGCCCAC 1 chr1:228109140-228109640 ( 46) GGCCCCGCCCAA 1 chr6:33571110-33571610 ( 73) GGCCCCGCCCAA 1 chr1:15246916-15247416 ( 38) TGCCACGCCCCC 1 chr19:8922495-8922995 ( 51) AGCCACGCCCAC 1 chr19:35879735-35880235 ( 1) AGCCCCGCCCCC 1 chr19:50384041-50384541 ( 15) GGCCACGCCCCG 1 chr17:48830768-48831268 ( 50) AGCCCCGCCCCC 1 chr10:132752267-13275276 ( 72) CGCCACGCCCCT 1 chr5:177497415-177497915 ( 29) TGCCCCGCCCCC 1 chr17:64975383-64975883 ( 37) CGCCACGCCCCT 1 chr12:6662702-6663202 ( 1) TGCCCCGCCCCC 1 chr17:17206273-17206773 ( 49) GGCCACGCCCAG 1 chr19:6677828-6678328 ( 33) CGCCACGCCCAC 1 chr6:6686927-6687427 ( 89) AGCCCCGCCCAC 1 chr6:69796801-69797301 ( 85) CGCCCCGCCCCT 1 chr7:75914819-75915319 ( 34) CGCCCCGCCCAC 1 chr16:75432962-75433462 ( 83) TGCCCCGCCCCA 1 chr19:35903637-35904137 ( 54) AGCCCCGCCCAA 1 chr19:55643343-55643843 ( 54) CGCCCCGCCCCA 1 chr2:241881440-241881940 ( 69) GACCACGCCCCT 1 chr12:121839367-12183986 ( 14) GACCACGCCCCT 1 chr12:53938345-53938845 ( 56) CGCCCCGCCCCA 1 chr19:8592368-8592868 ( 41) GGCCACGCCTAC 1 chr4:731282-731782 ( 88) GACCACGCCCAC 1 chr19:2335256-2335756 ( 54) GGCCCCGCCTCC 1 chr18:80033805-80034305 ( 5) CGCCCCGCCCAA 1 chr3:132417051-132417551 ( 2) GGACACGCCCCT 1 chr11:72223089-72223589 ( 71) GGCTCCGCCCCC 1 chr19:35869574-35870074 ( 56) GGCCCCGCCTCT 1 chr19:11346420-11346920 ( 60) GGCTCCGCCCCC 1 chr5:139403659-139404159 ( 49) GGCCCCGCCTCT 1 chr19:6767420-6767920 ( 52) GACCCCGCCCAC 1 chr5:173056941-173057441 ( 3) GGCTCCGCCCCT 1 chr19:40798656-40799156 ( 33) TGCCCCGCCCCG 1 chr1:235504255-235504755 ( 39) GGCTCCGCCCAC 1 chr2:219552489-219552989 ( 33) TGCCCCGCCCCG 1 chr10:101830475-10183097 ( 49) GGGCACGCCCCT 1 chr7:876170-876670 ( 79) GGACCCGCCCCT 1 chr6:34888938-34889438 ( 46) AGCCCCGCCCAG 1 chr12:52023584-52024084 ( 29) GGACCCGCCCCT 1 chr19:7870602-7871102 ( 4) AGCCACGCCTCC 1 chr1:92080231-92080731 ( 82) TGCCCCGCCCAG 1 chr17:42181064-42181564 ( 40) GGGCACGCCCAC 1 chr19:3573851-3574351 ( 43) AACCACGCCCAC 1 chr16:70800932-70801432 ( 62) GGGCCCGCCCCT 1 chr19:8525510-8526010 ( 13) GGCCTCGCCCCC 1 chr19:55624405-55624905 ( 59) CACCACGCCCCC 1 chrX:15737879-15738379 ( 71) GGTCACGCCCAA 1 chr19:17202251-17202751 ( 83) TGCCACGCCTAT 1 chr12:1907471-1907971 ( 68) AGACACGCCCAC 1 chr19:35643368-35643868 ( 14) GGGCCCGCCCCA 1 chr12:64759205-64759705 ( 39) TGCTCCGCCCCC 1 chr1:154973605-154974105 ( 48) AGCTCCGCCCCT 1 chr9:137423034-137423534 ( 56) GGCCTCGCCCAC 1 chr19:48321769-48322269 ( 84) AGGCACGCCCCC 1 chr19:33521613-33522113 ( 12) TACCCCGCCCCA 1 chr1:175023211-175023711 ( 83) AGCTCCGCCCCA 1 chr9:137156920-137157420 ( 53) GGCCCCGCCTAG 1 chr10:50067621-50068121 ( 85) GGTCACGCCCCG 1 chr10:45726944-45727444 ( 74) GGTCACGCCCCG 1 chr6:166956332-166956832 ( 74) CGGCACGCCCCC 1 chr17:68457513-68458013 ( 65) CGACCCGCCCCT 1 chr19:43475186-43475686 ( 10) GGCCCCGCCCTC 1 chr15:84980629-84981129 ( 75) CGCCACGCCTCG 1 chr4:3074159-3074659 ( 80) CACCACGCCCCG 1 chr6:149963608-149964108 ( 77) CGTCACGCCCCG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGCCMCGCCCCY MEME-6 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 12 n= 53400 bayes= 10.3249 E= 2.4e-012 -33 -83 82 -59 -91 -1297 153 -1297 -159 138 -205 -191 -1297 155 -1297 -111 121 79 -1297 -291 -1297 168 -1297 -1297 -1297 -1297 168 -1297 -1297 168 -1297 -1297 -1297 168 -1297 -1297 -1297 153 -1297 -91 73 112 -1297 -391 -1 45 -105 33 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGCCMCGCCCCY MEME-6 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 12 nsites= 80 E= 2.4e-012 0.150000 0.175000 0.550000 0.125000 0.100000 0.000000 0.900000 0.000000 0.062500 0.812500 0.075000 0.050000 0.000000 0.912500 0.000000 0.087500 0.437500 0.537500 0.000000 0.025000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.900000 0.000000 0.100000 0.312500 0.675000 0.000000 0.012500 0.187500 0.425000 0.150000 0.237500 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGCCMCGCCCCY MEME-6 regular expression -------------------------------------------------------------------------------- GGCC[CA]CGCCC[CA][CT] -------------------------------------------------------------------------------- Time 1790.26 secs. ******************************************************************************** ******************************************************************************** MOTIF TYTWATKWTNTSYYYWTRWTMWSABWBYTKSTRATYTCAYYSYTBMWTKT MEME-7 width = 50 sites = 7 llr = 230 E-value = 2.9e-001 ******************************************************************************** -------------------------------------------------------------------------------- Motif TYTWATKWTNTSYYYWTRWTMWSABWBYTKSTRATYTCAYYSYTBMWTKT MEME-7 Description -------------------------------------------------------------------------------- Simplified A ::1371:413111:16:3613417:3::::1:3a:1:17:1:1::44:13 pos.-specific C 16:1::111314634:11114:6:41341:411:13:934364334:::: probability G 1::1114:13:4:1:1:4::1:3:3:31:63:6::1:::::3::3::33: matrix T 74941744617:3643913716:336449419::94a::66147416767 bits 2.4 * * 2.2 * * 1.9 * * * 1.7 * * * * ** * Relative 1.4 * * * * * * ** * * * ** * Entropy 1.2 * ** * * * * * * * ** **** * ** * (47.5 bits) 1.0 *** ** * * ** ** * * * ** * ** **** * ** * 0.7 *** ** * * ***** ** * * * ** * ** ***** ** ***** 0.5 *** ***** * ***** ** *** ***** **** ************** 0.2 ********* ******************** ******************* 0.0 -------------------------------------------------- Multilevel TCTTATGATATCCTCATGATCTCACTTCTGCTGATTTCATTCCTTATTTT consensus T A TT C GTCTT AT AAGTGACT TG A C CCCGTCCCAGGA sequence G T G G -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TYTWATKWTNTSYYYWTRWTMWSABWBYTKSTRATYTCAYYSYTBMWTKT MEME-7 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- -------------------------------------------------- chr10:93209008-93209508 + 27 1.28e-19 TGATCTCACT GCTTATGATCTGTTTATGATCTCACTGCTTATGATCTCACTGCTTATGAT CTCACTGCTT chrUn_KI270467v1:2770-32 + 51 1.54e-18 tactttgata ttttatgtacagtttattataaatgttttgttaatttcatattttatgta chr1:29379363-29379863 + 12 7.02e-18 ttgttttggt ttttattagatactcttgctcagagagtttgtaatttacctgttgatttt ctttgttttt chr1:183471823-183472323 - 23 7.44e-15 GGAGTTACAC TCAAAGTCTTCCCCCTTCTTATCACTCCTGCCGATTTCCCTCTTCCTTTT TGCACGCCTC chr17:77233797-77234297 - 34 7.99e-15 TGACCTCATC CCTCTATTTGTCAGAATGAACTCATTTTTGCTGACCTCATCCCTGTATTT GTCAGAATGA chr8:144456717-144457217 - 2 9.21e-15 CAATACTCCC TTTGATGTCATCCCCGTAATGTCATCCCCTGTGATGTCATTCCCTCATGA T chr16:49084556-49085056 + 1 1.08e-13 . TCTAGTCATGTGCTTACATCTAGTCATGTGCTCATATCATCCACCCATGT GCTTGCATCA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TYTWATKWTNTSYYYWTRWTMWSABWBYTKSTRATYTCAYYSYTBMWTKT MEME-7 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr10:93209008-93209508 1.3e-19 26_[+7]_24 chrUn_KI270467v1:2770-32 1.5e-18 50_[+7] chr1:29379363-29379863 7e-18 11_[+7]_39 chr1:183471823-183472323 7.4e-15 22_[-7]_28 chr17:77233797-77234297 8e-15 33_[-7]_17 chr8:144456717-144457217 9.2e-15 1_[-7]_49 chr16:49084556-49085056 1.1e-13 [+7]_50 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TYTWATKWTNTSYYYWTRWTMWSABWBYTKSTRATYTCAYYSYTBMWTKT MEME-7 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TYTWATKWTNTSYYYWTRWTMWSABWBYTKSTRATYTCAYYSYTBMWTKT width=50 seqs=7 chr10:93209008-93209508 ( 27) GCTTATGATCTGTTTATGATCTCACTGCTTATGATCTCACTGCTTATGAT 1 chrUn_KI270467v1:2770-32 ( 51) TTTTATGTACAGTTTATTATAAATGTTTTGTTAATTTCATATTTTATGTA 1 chr1:29379363-29379863 ( 12) TTTTATTAGATACTCTTGCTCAGAGAGTTTGTAATTTACCTGTTGATTTT 1 chr1:183471823-183472323 ( 23) TCAAAGTCTTCCCCCTTCTTATCACTCCTGCCGATTTCCCTCTTCCTTTT 1 chr17:77233797-77234297 ( 34) CCTCTATTTGTCAGAATGAACTCATTTTTGCTGACCTCATCCCTGTATTT 1 chr8:144456717-144457217 ( 2) TTTGATGTCATCCCCGTAATGTCATCCCCTGTGATGTCATTCCCTCATGA 1 chr16:49084556-49085056 ( 1) TCTAGTCATGTGCTTACATCTAGTCATGTGCTCATATCATCCACCCATGT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TYTWATKWTNTSYYYWTRWTMWSABWBYTKSTRATYTCAYYSYTBMWTKT MEME-7 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 50 n= 30600 bayes= 11.9374 E= 2.9e-001 -945 -112 -112 192 -945 87 -945 118 -40 -945 -945 218 60 -112 -112 118 192 -945 -112 -40 -40 -945 -112 192 -945 -112 46 118 118 -112 -945 118 -40 -112 -112 160 60 -12 -12 -40 -40 -112 -945 192 -40 46 46 -945 -40 87 -945 60 -945 -12 -112 160 -40 46 -945 118 160 -945 -112 60 -945 -112 -945 218 60 -112 46 -40 160 -112 -945 60 -40 -112 -945 192 60 46 -112 -40 118 -945 -945 160 -40 87 -12 -945 192 -945 -945 60 -945 46 -12 60 60 -112 -945 160 -945 -12 -12 118 -945 46 -112 118 -945 -112 -945 218 -945 -945 87 118 -40 46 -12 -40 -945 -112 -945 218 60 -112 87 -945 241 -945 -945 -945 -945 -112 -945 218 -40 -12 -112 118 -945 -945 -945 241 -40 146 -945 -945 192 -12 -945 -945 -945 46 -945 160 -40 -12 -945 160 -945 87 -12 -40 -40 46 -945 118 -945 -12 -945 192 -945 -12 -12 118 118 46 -945 -40 118 -945 -945 160 -945 -945 -12 192 -40 -945 -12 160 60 -945 -945 192 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TYTWATKWTNTSYYYWTRWTMWSABWBYTKSTRATYTCAYYSYTBMWTKT MEME-7 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 50 nsites= 7 E= 2.9e-001 0.000000 0.142857 0.142857 0.714286 0.000000 0.571429 0.000000 0.428571 0.142857 0.000000 0.000000 0.857143 0.285714 0.142857 0.142857 0.428571 0.714286 0.000000 0.142857 0.142857 0.142857 0.000000 0.142857 0.714286 0.000000 0.142857 0.428571 0.428571 0.428571 0.142857 0.000000 0.428571 0.142857 0.142857 0.142857 0.571429 0.285714 0.285714 0.285714 0.142857 0.142857 0.142857 0.000000 0.714286 0.142857 0.428571 0.428571 0.000000 0.142857 0.571429 0.000000 0.285714 0.000000 0.285714 0.142857 0.571429 0.142857 0.428571 0.000000 0.428571 0.571429 0.000000 0.142857 0.285714 0.000000 0.142857 0.000000 0.857143 0.285714 0.142857 0.428571 0.142857 0.571429 0.142857 0.000000 0.285714 0.142857 0.142857 0.000000 0.714286 0.285714 0.428571 0.142857 0.142857 0.428571 0.000000 0.000000 0.571429 0.142857 0.571429 0.285714 0.000000 0.714286 0.000000 0.000000 0.285714 0.000000 0.428571 0.285714 0.285714 0.285714 0.142857 0.000000 0.571429 0.000000 0.285714 0.285714 0.428571 0.000000 0.428571 0.142857 0.428571 0.000000 0.142857 0.000000 0.857143 0.000000 0.000000 0.571429 0.428571 0.142857 0.428571 0.285714 0.142857 0.000000 0.142857 0.000000 0.857143 0.285714 0.142857 0.571429 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.142857 0.000000 0.857143 0.142857 0.285714 0.142857 0.428571 0.000000 0.000000 0.000000 1.000000 0.142857 0.857143 0.000000 0.000000 0.714286 0.285714 0.000000 0.000000 0.000000 0.428571 0.000000 0.571429 0.142857 0.285714 0.000000 0.571429 0.000000 0.571429 0.285714 0.142857 0.142857 0.428571 0.000000 0.428571 0.000000 0.285714 0.000000 0.714286 0.000000 0.285714 0.285714 0.428571 0.428571 0.428571 0.000000 0.142857 0.428571 0.000000 0.000000 0.571429 0.000000 0.000000 0.285714 0.714286 0.142857 0.000000 0.285714 0.571429 0.285714 0.000000 0.000000 0.714286 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TYTWATKWTNTSYYYWTRWTMWSABWBYTKSTRATYTCAYYSYTBMWTKT MEME-7 regular expression -------------------------------------------------------------------------------- T[CT]T[TA]AT[GT][AT]T[ACG]T[CG][CT][TC][CT][AT]T[GA][AT]T[CA][TA][CG][AT][CGT][TA][TCG][CT]T[GT][CG]T[GA]AT[TC]TC[AC][TC][TC][CG][CT][TC][TCG][AC][TA][TG][TG][TA] -------------------------------------------------------------------------------- Time 2039.71 secs. ******************************************************************************** ******************************************************************************** MOTIF KMSCCTNARYMYVGCRSSTYRGAYCACKYGSSSRYBCTRHCACGYKRCAT MEME-8 width = 50 sites = 5 llr = 212 E-value = 1.0e-001 ******************************************************************************** -------------------------------------------------------------------------------- Motif KMSCCTNARYMYVGCRSSTYRGAYCACKYGSSSRYBCTRHCACGYKRCAT MEME-8 Description -------------------------------------------------------------------------------- Simplified A :6::::2a4:4:4::4::::6:a::8:::::::6::::42:622::6:82 pos.-specific C :44a8:4::4642:a:66:4:::6a:a:6:466:42a::4a2826::82: probability G 4:6:::2:6:::4a:644::4a:::2:4:a6444:4::6::::6:64::2 matrix T 6:::2a2::6:6::::::a6:::4:::64:::::64:a:4:2::44:2:6 bits 2.4 * * * * * 2.2 * * * * * 1.9 * * * * * 1.7 * * * ** * ** * * * ** * Relative 1.4 * * * ** * ** *** * ** * * Entropy 1.2 ** *** * * * ** ***** **** * ** ** * * *** (61.1 bits) 1.0 ** *** ***** *** ************ ** *** *** ****** 0.7 ****** ***** ********************** *** *** ****** 0.5 ****** ******************************************* 0.2 ****** ******************************************* 0.0 -------------------------------------------------- Multilevel TAGCCTCAGTCTAGCGCCTTAGACCACTCGGCCATGCTGCCACGCGACAT consensus GCC T A ACACG AGG CG T G GT CGGGCT AT CAATTGTCA sequence G C C A T C G T -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif KMSCCTNARYMYVGCRSSTYRGAYCACKYGSSSRYBCTRHCACGYKRCAT MEME-8 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- -------------------------------------------------- chr6:28896041-28896541 + 47 8.88e-22 ggaggaagct tagcttgagtctggcgccttagaccactcggccatcctgacACACTGCAT AACA chr10:50067621-50068121 + 19 3.40e-20 CGCAGCTTCC TCCCCTCAGCATGGCAGGTCGGATCACGTGCGGGTTCTGTCACGTGACAT CAGGTCACGT chr10:45726944-45727444 + 8 7.77e-20 AGCTTCC TCCCCTCAGCATCGCAGGTCGGATCACGTGCGGGTTCTGTCACGTGACAT CAGGTCACGT chr16:22296930-22297430 - 1 2.93e-19 GAAGAGACTG GAGCCTTAATCCAGCGCCTTAGACCGCTCGGCCACGCTACCCAGCTGCAA chr16:22195541-22196041 + 11 3.85e-19 gaaatgactg gagcctaaatccagcgccttagaccactcggccacgctaccTCCCGATCG TAGGGCTTCC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif KMSCCTNARYMYVGCRSSTYRGAYCACKYGSSSRYBCTRHCACGYKRCAT MEME-8 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr6:28896041-28896541 8.9e-22 46_[+8]_4 chr10:50067621-50068121 3.4e-20 18_[+8]_32 chr10:45726944-45727444 7.8e-20 7_[+8]_43 chr16:22296930-22297430 2.9e-19 [-8]_50 chr16:22195541-22196041 3.8e-19 10_[+8]_40 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif KMSCCTNARYMYVGCRSSTYRGAYCACKYGSSSRYBCTRHCACGYKRCAT MEME-8 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF KMSCCTNARYMYVGCRSSTYRGAYCACKYGSSSRYBCTRHCACGYKRCAT width=50 seqs=5 chr6:28896041-28896541 ( 47) TAGCTTGAGTCTGGCGCCTTAGACCACTCGGCCATCCTGACACACTGCAT 1 chr10:50067621-50068121 ( 19) TCCCCTCAGCATGGCAGGTCGGATCACGTGCGGGTTCTGTCACGTGACAT 1 chr10:45726944-45727444 ( 8) TCCCCTCAGCATCGCAGGTCGGATCACGTGCGGGTTCTGTCACGTGACAT 1 chr16:22296930-22297430 ( 1) GAGCCTTAATCCAGCGCCTTAGACCGCTCGGCCACGCTACCCAGCTGCAA 1 chr16:22195541-22196041 ( 11) GAGCCTAAATCCAGCGCCTTAGACCACTCGGCCACGCTACCTCCCGATCG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif KMSCCTNARYMYVGCRSSTYRGAYCACKYGSSSRYBCTRHCACGYKRCAT MEME-8 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 50 n= 30600 bayes= 12.0134 E= 1.0e-001 -897 -897 36 167 167 36 -897 -897 -897 36 94 -897 -897 168 -897 -897 -897 136 -897 9 -897 -897 -897 241 9 36 -64 9 241 -897 -897 -897 108 -897 94 -897 -897 36 -897 167 108 94 -897 -897 -897 36 -897 167 108 -64 36 -897 -897 -897 168 -897 -897 168 -897 -897 108 -897 94 -897 -897 94 36 -897 -897 94 36 -897 -897 -897 -897 241 -897 36 -897 167 167 -897 36 -897 -897 -897 168 -897 241 -897 -897 -897 -897 94 -897 108 -897 168 -897 -897 208 -897 -64 -897 -897 168 -897 -897 -897 -897 36 167 -897 94 -897 108 -897 -897 168 -897 -897 36 94 -897 -897 94 36 -897 -897 94 36 -897 167 -897 36 -897 -897 36 -897 167 -897 -64 36 108 -897 168 -897 -897 -897 -897 -897 241 108 -897 94 -897 9 36 -897 108 -897 168 -897 -897 167 -64 -897 9 9 136 -897 -897 9 -64 94 -897 -897 94 -897 108 -897 -897 94 108 167 -897 36 -897 -897 136 -897 9 208 -64 -897 -897 9 -897 -64 167 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif KMSCCTNARYMYVGCRSSTYRGAYCACKYGSSSRYBCTRHCACGYKRCAT MEME-8 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 50 nsites= 5 E= 1.0e-001 0.000000 0.000000 0.400000 0.600000 0.600000 0.400000 0.000000 0.000000 0.000000 0.400000 0.600000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.800000 0.000000 0.200000 0.000000 0.000000 0.000000 1.000000 0.200000 0.400000 0.200000 0.200000 1.000000 0.000000 0.000000 0.000000 0.400000 0.000000 0.600000 0.000000 0.000000 0.400000 0.000000 0.600000 0.400000 0.600000 0.000000 0.000000 0.000000 0.400000 0.000000 0.600000 0.400000 0.200000 0.400000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.400000 0.000000 0.600000 0.000000 0.000000 0.600000 0.400000 0.000000 0.000000 0.600000 0.400000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.400000 0.000000 0.600000 0.600000 0.000000 0.400000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.600000 0.000000 0.400000 0.000000 1.000000 0.000000 0.000000 0.800000 0.000000 0.200000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.400000 0.600000 0.000000 0.600000 0.000000 0.400000 0.000000 0.000000 1.000000 0.000000 0.000000 0.400000 0.600000 0.000000 0.000000 0.600000 0.400000 0.000000 0.000000 0.600000 0.400000 0.000000 0.600000 0.000000 0.400000 0.000000 0.000000 0.400000 0.000000 0.600000 0.000000 0.200000 0.400000 0.400000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.400000 0.000000 0.600000 0.000000 0.200000 0.400000 0.000000 0.400000 0.000000 1.000000 0.000000 0.000000 0.600000 0.200000 0.000000 0.200000 0.200000 0.800000 0.000000 0.000000 0.200000 0.200000 0.600000 0.000000 0.000000 0.600000 0.000000 0.400000 0.000000 0.000000 0.600000 0.400000 0.600000 0.000000 0.400000 0.000000 0.000000 0.800000 0.000000 0.200000 0.800000 0.200000 0.000000 0.000000 0.200000 0.000000 0.200000 0.600000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif KMSCCTNARYMYVGCRSSTYRGAYCACKYGSSSRYBCTRHCACGYKRCAT MEME-8 regular expression -------------------------------------------------------------------------------- [TG][AC][GC]C[CT]T[CAGT]A[GA][TC][CA][TC][AGC]GC[GA][CG][CG]T[TC][AG]GA[CT]C[AG]C[TG][CT]G[GC][CG][CG][AG][TC][GTC]CT[GA][CTA]C[ACT][CA][GAC][CT][GT][AG][CT][AC][TAG] -------------------------------------------------------------------------------- Time 2290.14 secs. ******************************************************************************** ******************************************************************************** MOTIF WACTTTATTGVCAVY MEME-9 width = 15 sites = 9 llr = 140 E-value = 1.1e+003 ******************************************************************************** -------------------------------------------------------------------------------- Motif WACTTTATTGVCAVY MEME-9 Description -------------------------------------------------------------------------------- Simplified A 78::::a1:24:82: pos.-specific C :19:1:::::2a247 probability G ::::::::163::3: matrix T 311a9a:992::::3 bits 2.4 * ** 2.2 * ** 1.9 ****** 1.7 ****** * Relative 1.4 ** ****** ** Entropy 1.2 ********* ** (22.4 bits) 1.0 ********* ** * 0.7 ********* ** * 0.5 ************* * 0.2 *************** 0.0 --------------- Multilevel AACTTTATTGACACC consensus T AG CGT sequence TC A -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WACTTTATTGVCAVY MEME-9 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- --------------- chr1:175023211-175023711 + 27 3.60e-10 AAACCGCTGA AACTTTATTGACACT GCCGAATAGC chr19:54115401-54115901 - 48 4.10e-09 TTGAAACAAC AACTTTATTAGCACC TGGCACTAGG chr17:42998034-42998534 - 22 6.19e-09 ATTCGAATGA AACTTTATTAGCAGC TCCAGCAGTA chr5:145835119-145835619 + 73 2.37e-08 AAACTTTCGA AACTTTATTGGCCAC TCGGAGAAAC chr1:22451681-22452181 - 83 2.87e-08 CCG TTCTTTATTGACAGC GCCATAGAGG chr19:38851540-38852040 - 80 6.09e-08 TCCCCT AACTTTATTTCCCCT CACCGGCAGA chr5:5422219-5422719 - 41 1.16e-07 TAAGGGTCGA TCCTTTATTGCCACC TTGCTGTACG chr17:39154318-39154818 - 58 1.72e-07 CATAGAAATT AACTCTAATGACAAC GTAGTGGCGT chrUn_KI270467v1:2038-25 + 73 3.08e-07 ggtactttga tattttatgtacagt atgctatata -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WACTTTATTGVCAVY MEME-9 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr1:175023211-175023711 3.6e-10 26_[+9]_59 chr19:54115401-54115901 4.1e-09 47_[-9]_38 chr17:42998034-42998534 6.2e-09 21_[-9]_64 chr5:145835119-145835619 2.4e-08 72_[+9]_13 chr1:22451681-22452181 2.9e-08 82_[-9]_3 chr19:38851540-38852040 6.1e-08 79_[-9]_6 chr5:5422219-5422719 1.2e-07 40_[-9]_45 chr17:39154318-39154818 1.7e-07 57_[-9]_28 chrUn_KI270467v1:2038-25 3.1e-07 72_[+9]_13 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WACTTTATTGVCAVY MEME-9 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF WACTTTATTGVCAVY width=15 seqs=9 chr1:175023211-175023711 ( 27) AACTTTATTGACACT 1 chr19:54115401-54115901 ( 48) AACTTTATTAGCACC 1 chr17:42998034-42998534 ( 22) AACTTTATTAGCAGC 1 chr5:145835119-145835619 ( 73) AACTTTATTGGCCAC 1 chr1:22451681-22452181 ( 83) TTCTTTATTGACAGC 1 chr19:38851540-38852040 ( 80) AACTTTATTTCCCCT 1 chr5:5422219-5422719 ( 41) TCCTTTATTGCCACC 1 chr17:39154318-39154818 ( 58) AACTCTAATGACAAC 1 chrUn_KI270467v1:2038-25 ( 73) TATTTTATGTACAGT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WACTTTATTGVCAVY MEME-9 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 15 n= 51600 bayes= 12.6192 E= 1.1e+003 182 -982 -982 82 204 -148 -982 -76 -982 151 -982 -76 -982 -982 -982 241 -982 -148 -982 224 -982 -982 -982 241 241 -982 -982 -982 -76 -982 -982 224 -982 -982 -148 224 24 -982 83 24 124 -49 10 -982 -982 168 -982 -982 204 -49 -982 -982 24 51 10 -982 -982 110 -982 82 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WACTTTATTGVCAVY MEME-9 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 15 nsites= 9 E= 1.1e+003 0.666667 0.000000 0.000000 0.333333 0.777778 0.111111 0.000000 0.111111 0.000000 0.888889 0.000000 0.111111 0.000000 0.000000 0.000000 1.000000 0.000000 0.111111 0.000000 0.888889 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 0.111111 0.000000 0.000000 0.888889 0.000000 0.000000 0.111111 0.888889 0.222222 0.000000 0.555556 0.222222 0.444444 0.222222 0.333333 0.000000 0.000000 1.000000 0.000000 0.000000 0.777778 0.222222 0.000000 0.000000 0.222222 0.444444 0.333333 0.000000 0.000000 0.666667 0.000000 0.333333 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WACTTTATTGVCAVY MEME-9 regular expression -------------------------------------------------------------------------------- [AT]ACTTTATT[GAT][AGC]C[AC][CGA][CT] -------------------------------------------------------------------------------- Time 2539.41 secs. ******************************************************************************** ******************************************************************************** MOTIF CTYTCYTTTYNY MEME-10 width = 12 sites = 25 llr = 280 E-value = 1.3e+003 ******************************************************************************** -------------------------------------------------------------------------------- Motif CTYTCYTTTYNY MEME-10 Description -------------------------------------------------------------------------------- Simplified A 2:::::::::2: pos.-specific C 7:4:9422:435 probability G 1:::1:::::21 matrix T :a6a:688a634 bits 2.4 * * 2.2 * * * 1.9 * * * 1.7 * * * Relative 1.4 * * *** Entropy 1.2 ********* (16.2 bits) 1.0 ********* 0.7 ********** * 0.5 ********** * 0.2 ********** * 0.0 ------------ Multilevel CTTTCTTTTTCC consensus A C CCC CTT sequence G A -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTYTCYTTTYNY MEME-10 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ------------ chr19:40750170-40750670 - 67 2.02e-07 TTCCTGACTC CTTTCCTTTTTC CAGTGGTTAT chr16:87383781-87384281 - 1 2.02e-07 GGCATCACCA CTTTCTTTTCTC chr15:75335817-75336317 - 36 2.31e-07 GGGCCCGGGA ATTTCTTTTTCC GGTCCCGCAG chr16:29863182-29863682 + 27 3.39e-07 AAAATCTCTG CTTTCCTTTTGT GGAGGGTATG chr6:26027072-26027572 - 12 6.35e-07 TCGTGGCTTG CTTTCTTTTCGC GTACCTGGTT chr10:22229218-22229718 - 77 8.61e-07 CAGGGACGCG CTCTCCTTTTAT GAGCTGGTCG chr1:29379363-29379863 + 62 8.61e-07 tgttgatttt ctttgttttttc cccattctgt chr19:45092772-45093272 + 7 1.13e-06 GCTCAC GTTTCTTTTTTC CGTGGCCCTT chr9:92325190-92325690 + 62 1.13e-06 AGAGCTTTTA ATTTCCTTTTCC GTCCTCCCAC chr6:35259440-35259940 - 43 1.28e-06 GGCCGCCGCA CTTTCCTTTCCT CTTGGCGCGC chr19:13277013-13277513 + 80 1.83e-06 ggcccctccc atctcttttcat actgcagat chr1:41870076-41870576 + 76 2.40e-06 cgacttatca ctctctcttttc aacgttgcaa chr8:18083983-18084483 - 77 2.87e-06 CTGGAAGGCT CTCTCTCTTTCT CTACGCCACC chr10:42782462-42782962 + 63 3.20e-06 CCCCATGCCG GTCTCTTTTTTC TGCCTTCTTG chr4:105708457-105708957 - 61 3.63e-06 CTGTGGGAAC CTTTGTTTTCCT GCTTTCGGAG chr19:1383466-1383966 + 17 3.63e-06 TGAGTGTCGC CTCTGTTTTTGT CGGTCCGCCG chr22:39520128-39520628 + 32 3.89e-06 TAGTACACCT CTCTCCTTTCGT GAGGCCATAA chr15:66504752-66505252 + 23 4.25e-06 CGAGAGTGTT ATTTCTTTATTT GTGGGAAATT chr4:4541842-4542342 - 44 5.37e-06 AGGCCGGAAC CTTTCTTCTCGC GTCGCCGTTG chr22:41468738-41469238 + 20 8.38e-06 GGGCAGTCCG ATTTCCTCTTGC GTGTCTGTTC chr2:121076799-121077299 - 62 9.01e-06 TGCTTCTTCC CTCTCCTCTTAC AGGTGGTGCT chr1:232732343-232732843 + 16 1.05e-05 atgtctgatt atctccctttat gggatgttaa chr21:39313505-39314005 - 83 1.38e-05 GCGTCA CTTTCTCCTCAT CGAGTCCCCG chr12:54359080-54359580 - 86 1.76e-05 GCT CTCTCTCTTTCG CTGTCTCTTA chr16:67872799-67873299 + 23 1.86e-05 AGCCCGGAAC CTTTCTTCTCCG GCCCTGGCAG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTYTCYTTTYNY MEME-10 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr19:40750170-40750670 2e-07 66_[-10]_22 chr16:87383781-87384281 2e-07 [-10]_88 chr15:75335817-75336317 2.3e-07 35_[-10]_53 chr16:29863182-29863682 3.4e-07 26_[+10]_62 chr6:26027072-26027572 6.4e-07 11_[-10]_77 chr10:22229218-22229718 8.6e-07 76_[-10]_12 chr1:29379363-29379863 8.6e-07 61_[+10]_27 chr19:45092772-45093272 1.1e-06 6_[+10]_82 chr9:92325190-92325690 1.1e-06 61_[+10]_27 chr6:35259440-35259940 1.3e-06 42_[-10]_46 chr19:13277013-13277513 1.8e-06 79_[+10]_9 chr1:41870076-41870576 2.4e-06 75_[+10]_13 chr8:18083983-18084483 2.9e-06 76_[-10]_12 chr10:42782462-42782962 3.2e-06 62_[+10]_26 chr4:105708457-105708957 3.6e-06 60_[-10]_28 chr19:1383466-1383966 3.6e-06 16_[+10]_72 chr22:39520128-39520628 3.9e-06 31_[+10]_57 chr15:66504752-66505252 4.3e-06 22_[+10]_66 chr4:4541842-4542342 5.4e-06 43_[-10]_45 chr22:41468738-41469238 8.4e-06 19_[+10]_69 chr2:121076799-121077299 9e-06 61_[-10]_27 chr1:232732343-232732843 1.1e-05 15_[+10]_73 chr21:39313505-39314005 1.4e-05 82_[-10]_6 chr12:54359080-54359580 1.8e-05 85_[-10]_3 chr16:67872799-67873299 1.9e-05 22_[+10]_66 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTYTCYTTTYNY MEME-10 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CTYTCYTTTYNY width=12 seqs=25 chr19:40750170-40750670 ( 67) CTTTCCTTTTTC 1 chr16:87383781-87384281 ( 1) CTTTCTTTTCTC 1 chr15:75335817-75336317 ( 36) ATTTCTTTTTCC 1 chr16:29863182-29863682 ( 27) CTTTCCTTTTGT 1 chr6:26027072-26027572 ( 12) CTTTCTTTTCGC 1 chr10:22229218-22229718 ( 77) CTCTCCTTTTAT 1 chr1:29379363-29379863 ( 62) CTTTGTTTTTTC 1 chr19:45092772-45093272 ( 7) GTTTCTTTTTTC 1 chr9:92325190-92325690 ( 62) ATTTCCTTTTCC 1 chr6:35259440-35259940 ( 43) CTTTCCTTTCCT 1 chr19:13277013-13277513 ( 80) ATCTCTTTTCAT 1 chr1:41870076-41870576 ( 76) CTCTCTCTTTTC 1 chr8:18083983-18084483 ( 77) CTCTCTCTTTCT 1 chr10:42782462-42782962 ( 63) GTCTCTTTTTTC 1 chr4:105708457-105708957 ( 61) CTTTGTTTTCCT 1 chr19:1383466-1383966 ( 17) CTCTGTTTTTGT 1 chr22:39520128-39520628 ( 32) CTCTCCTTTCGT 1 chr15:66504752-66505252 ( 23) ATTTCTTTATTT 1 chr4:4541842-4542342 ( 44) CTTTCTTCTCGC 1 chr22:41468738-41469238 ( 20) ATTTCCTCTTGC 1 chr2:121076799-121077299 ( 62) CTCTCCTCTTAC 1 chr1:232732343-232732843 ( 16) ATCTCCCTTTAT 1 chr21:39313505-39314005 ( 83) CTTTCTCCTCAT 1 chr12:54359080-54359580 ( 86) CTCTCTCTTTCG 1 chr16:67872799-67873299 ( 23) CTTTCTTCTCCG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTYTCYTTTYNY MEME-10 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 12 n= 53400 bayes= 10.7683 E= 1.3e+003 35 113 -196 -1129 -1129 -1129 -1129 241 -1129 36 -1129 167 -1129 -1129 -1129 241 -1129 150 -138 -1129 -1129 21 -1129 176 -1129 -64 -1129 208 -1129 -64 -1129 208 -223 -1129 -1129 235 -1129 21 -1129 176 9 -15 -38 57 -1129 62 -196 122 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTYTCYTTTYNY MEME-10 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 12 nsites= 25 E= 1.3e+003 0.240000 0.680000 0.080000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.400000 0.000000 0.600000 0.000000 0.000000 0.000000 1.000000 0.000000 0.880000 0.120000 0.000000 0.000000 0.360000 0.000000 0.640000 0.000000 0.200000 0.000000 0.800000 0.000000 0.200000 0.000000 0.800000 0.040000 0.000000 0.000000 0.960000 0.000000 0.360000 0.000000 0.640000 0.200000 0.280000 0.240000 0.280000 0.000000 0.480000 0.080000 0.440000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTYTCYTTTYNY MEME-10 regular expression -------------------------------------------------------------------------------- [CA]T[TC]TC[TC][TC][TC]T[TC][CTGA][CT] -------------------------------------------------------------------------------- Time 2787.37 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr15:74614640-74615140 3.10e-01 100 chr9:137156920-137157420 1.28e-03 4_[+1(1.31e-06)]_32_[-6(6.81e-05)]_\ 36 chr5:56123720-56124220 2.15e-03 54_[+1(2.02e-05)]_30 chr17:28728486-28728986 1.30e-03 24_[+6(6.42e-05)]_17_[-6(2.99e-06)]_\ 1_[+1(9.37e-06)]_18 chr1:46132500-46133000 9.20e-03 45_[-1(3.48e-05)]_39 chr18:24397732-24398232 4.11e-02 1_[-1(1.51e-05)]_16_[-1(9.71e-05)]_\ 51 chr1:225923886-225924386 6.10e-01 100 chr1:1375028-1375528 9.86e-01 100 chr6:87155346-87155846 1.96e-02 64_[+2(2.61e-05)]_20 chr19:17334710-17335210 1.96e-01 100 chr5:141564101-141564601 3.05e-05 7_[-10(4.06e-05)]_21_[+4(1.73e-06)]_\ 29 chr1:33181900-33182400 1.95e-04 37_[-6(2.99e-06)]_15_[-1(7.90e-06)]_\ 20 chr17:8120792-8121292 1.04e-08 31_[+3(2.05e-08)]_8_[+5(9.52e-06)]_\ 14 chr19:58380574-58381074 1.77e-01 69_[-5(9.17e-05)]_15 chr17:42181064-42181564 1.46e-02 39_[+6(3.44e-05)]_21_[-6(1.32e-05)]_\ 16 chr6:27505568-27506068 3.10e-02 10_[-9(5.09e-05)]_75 chr12:54207673-54208173 2.12e-01 100 chr15:83206993-83207493 6.56e-02 64_[+1(3.95e-05)]_20 chr1:244864385-244864885 9.74e-05 53_[+6(4.00e-06)]_11_[-1(4.46e-05)]_\ 8 chr1:41870076-41870576 3.42e-04 75_[+10(2.40e-06)]_13 chr14:102591975-10259247 2.75e-01 100 chr6:6686927-6687427 9.86e-06 14_[-1(2.56e-06)]_20_[-1(4.94e-08)]_\ 22_[+6(1.07e-05)] chr17:19507972-19508472 2.69e-01 100 chr5:138352203-138352703 1.31e-04 48_[-1(3.71e-07)]_36 chr1:175023211-175023711 9.61e-09 26_[+9(3.60e-10)]_20_[-6(2.99e-06)]_\ 9_[-6(6.81e-05)]_6 chr17:7329417-7329917 1.01e-02 100 chr12:53938345-53938845 4.15e-02 55_[+6(1.86e-05)]_33 chr15:67521623-67522123 4.22e-02 5_[+1(7.08e-05)]_79 chr19:7394768-7395268 4.37e-01 74_[-1(7.88e-05)]_10 chr19:44002307-44002807 5.92e-03 1_[+10(4.06e-05)]_42_[+3(5.90e-05)]_\ 14 chr9:129496552-129497052 4.67e-01 100 chr20:38356210-38356710 1.13e-16 10_[-2(2.25e-10)]_[-2(2.25e-10)]_58 chr2:241102147-241102647 9.80e-01 100 chr19:37594932-37595432 1.29e-08 67_[-4(1.98e-11)]_2 chr19:35510056-35510556 4.16e-01 100 chr1:183060417-183060917 2.65e-04 55_[+3(1.04e-08)]_14 chr5:173056941-173057441 2.39e-02 2_[-6(2.63e-05)]_59_[+1(6.33e-05)]_\ 11 chr1:46340563-46341063 9.39e-01 100 chr1:36464186-36464686 8.66e-02 100 chr2:223957183-223957683 3.42e-01 100 chr19:6767420-6767920 2.46e-06 12_[-1(5.54e-06)]_23_[+6(2.63e-05)]_\ 37 chr1:22451681-22452181 5.52e-04 82_[-9(2.87e-08)]_3 chr19:35758155-35758655 9.75e-01 100 chr12:56724908-56725408 2.86e-01 100 chr10:130110560-13011106 9.03e-03 63_[-1(1.10e-05)]_21 chr19:8832210-8832710 2.09e-01 70_[-9(8.63e-05)]_15 chr5:181223217-181223717 5.22e-02 29_[+10(1.38e-05)]_59 chr17:76353847-76354347 1.36e-01 7_[+7(9.67e-06)]_43 chr17:20155659-20156159 6.93e-03 42_[-6(9.18e-05)]_46 chr1:29379363-29379863 1.51e-15 11_[+7(7.02e-18)]_[+10(8.61e-07)]_\ 27 chr16:30400142-30400642 8.95e-01 100 chr4:731282-731782 2.18e-05 4_[+10(5.32e-05)]_21_[-6(1.13e-06)]_\ 38_[-6(1.95e-05)]_1 chr19:44025270-44025770 5.20e-01 100 chr18:5237734-5238234 9.50e-01 100 chr7:1718963-1719463 9.91e-03 7_[+6(3.50e-06)]_24_[+6(3.50e-06)]_\ 24_[+6(3.50e-06)]_9 chr2:9630880-9631380 5.39e-06 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chr3:53347415-53347915 9.93e-01 100 chr1:228139855-228140355 2.85e-03 7_[-5(4.20e-05)]_49_[-5(6.33e-06)]_\ 12 chr19:34676847-34677347 7.38e-01 100 chr8:18083983-18084483 7.46e-06 14_[+1(2.67e-05)]_[-5(2.91e-06)]_30_\ [-10(2.87e-06)]_12 chr9:136342690-136343190 8.53e-05 18_[-6(2.99e-06)]_8_[-6(1.95e-05)]_\ 7_[+1(4.60e-06)]_27 chr16:67872799-67873299 6.88e-02 22_[+10(1.86e-05)]_66 chr19:55216291-55216791 4.76e-01 100 chr12:49568002-49568502 2.33e-04 22_[-3(1.34e-07)]_18_\ [-10(7.37e-05)]_17 chr12:132303820-13230432 1.30e-05 17_[-1(3.95e-05)]_4_[-2(8.27e-05)]_\ 14_[+4(1.86e-07)]_2 chr7:129952765-129953265 2.98e-03 26_[+1(2.33e-05)]_6_[+1(8.76e-05)]_\ 36 chr19:49676274-49676774 9.25e-05 24_[+3(2.20e-07)]_45 chr12:52903320-52903820 9.88e-01 100 chr19:40806791-40807291 7.40e-02 100 chr5:141618903-141619403 1.12e-02 22_[-10(2.14e-05)]_66 chr19:29942607-29943107 4.86e-01 100 chr8:10839693-10840193 1.66e-04 38_[+1(9.37e-06)]_46 chr21:46635658-46636158 1.90e-01 6_[-1(4.46e-05)]_78 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10_[+6(7.83e-06)]_78 chr15:65610907-65611407 9.29e-01 100 chr1:24744931-24745431 5.45e-04 29_[+6(5.13e-07)]_59 chr11:94767903-94768403 7.54e-01 100 chr15:82540307-82540807 6.00e-01 100 chr17:78140317-78140817 1.57e-04 16_[-6(2.17e-06)]_72 chrX:1452822-1453322 4.83e-04 66_[+6(2.17e-06)]_22 chr18:74495855-74496355 2.88e-04 15_[-1(2.08e-06)]_69 chr22:41468738-41469238 1.13e-03 19_[+10(8.38e-06)]_19_\ [-1(4.46e-05)]_34 chr1:223142943-223143443 9.26e-01 100 chr7:129054832-129055332 1.57e-01 59_[-9(9.40e-05)]_26 chr16:29863182-29863682 1.18e-04 26_[+10(3.39e-07)]_62 chr17:47971116-47971616 1.38e-02 9_[-1(1.75e-05)]_75 chr16:58129313-58129813 3.11e-02 1_[+5(5.69e-06)]_83 chr19:3573851-3574351 8.42e-05 42_[+6(4.06e-05)]_8_[+6(1.13e-06)]_\ 26 chr4:105708457-105708957 6.42e-03 60_[-10(3.63e-06)]_8_[+1(9.71e-05)]_\ 4 chr6:143450498-143450998 8.72e-02 8_[-5(3.06e-05)]_76 chr1:31644869-31645369 1.46e-03 34_[+5(5.90e-07)]_50 chr19:54190834-54191334 3.98e-02 79_[-10(5.52e-05)]_9 chr12:12611654-12612154 1.41e-04 3_[-1(6.33e-05)]_50_[-5(3.35e-09)]_\ 15 chr20:327049-327549 5.61e-02 100 chr19:35643368-35643868 3.78e-01 13_[-6(5.29e-05)]_75 chr10:72625844-72626344 1.47e-04 45_[-1(2.33e-05)]_39 chr15:72231117-72231617 6.10e-01 100 chr19:40750170-40750670 1.33e-04 66_[-10(2.02e-07)]_22 chr1:9943139-9943639 9.71e-01 100 chr16:49084556-49085056 8.52e-09 [+7(1.08e-13)]_50 chr16:89142387-89142887 5.25e-06 20_[-2(5.40e-08)]_18_[-2(5.40e-08)]_\ 2_[-2(6.16e-05)]_12 chr1:26432023-26432523 5.52e-02 44_[+1(2.33e-05)]_40 chr16:31179764-31180264 4.45e-05 24_[+10(6.51e-05)]_27_\ [+1(5.03e-05)]_2_[+5(6.33e-06)]_3 chr4:102827391-102827891 9.96e-01 100 chr7:128343663-128344163 1.95e-02 100 chr19:39480576-39481076 2.52e-06 44_[+1(4.81e-07)]_40 chr17:32341960-32342460 2.50e-01 100 chr1:241998455-241998955 1.95e-03 82_[-1(7.88e-05)]_2 chr17:74514525-74515025 7.81e-05 5_[-4(1.97e-06)]_27_[-4(7.90e-08)]_\ 6 chr19:45467669-45468169 1.25e-03 21_[-4(5.33e-05)]_23_[+1(2.67e-05)]_\ 9 chr20:45891023-45891523 4.16e-02 47_[-5(9.52e-06)]_37 chr19:43754470-43754970 1.20e-01 43_[+1(1.51e-05)]_41 chr17:74513943-74514443 8.62e-05 35_[-4(2.86e-08)]_34 chr17:45148340-45148840 1.26e-06 9_[-5(4.42e-07)]_1_[-5(6.08e-05)]_\ 36_[-10(6.88e-05)]_10 chr17:68019685-68020185 6.38e-01 31_[-2(7.02e-05)]_53 chr19:39411927-39412427 3.80e-05 10_[-3(5.15e-08)]_59 chr5:180594723-180595223 4.48e-14 [-4(1.98e-14)]_4_[+2(3.95e-09)]_2_\ [-4(1.15e-13)]_[+2(1.70e-05)] chr19:49580372-49580872 1.23e-04 19_[-1(1.66e-06)]_65 chr19:48321769-48322269 1.91e-07 46_[+6(5.13e-07)]_6_[-2(4.57e-06)]_\ 2_[-1(5.54e-06)]_2 chr12:124914534-12491503 8.55e-01 100 chr12:55715822-55716322 6.36e-01 1_[-8(4.65e-05)]_49 chr12:123601761-12360226 3.69e-01 100 chr19:36528307-36528807 3.32e-01 100 chr19:8922495-8922995 2.73e-06 9_[+1(6.87e-08)]_3_[+1(6.63e-06)]_3_\ [+1(8.03e-07)]_37 chr6:30907815-30908315 4.35e-02 41_[+10(2.14e-05)]_47 chr4:77156783-77157283 9.73e-01 100 chr3:9731353-9731853 4.45e-01 100 chr1:93078943-93079443 5.20e-01 100 chr1:44213177-44213677 8.53e-01 100 chr13:30617623-30618123 1.14e-01 100 chr16:2603106-2603606 6.62e-02 79_[+1(3.95e-05)]_5 chr1:202204265-202204765 1.93e-12 4_[+4(7.52e-15)]_3_[+4(2.85e-12)]_\ 10_[-2(1.83e-08)]_5 chr19:41706699-41707199 6.22e-03 43_[+5(1.68e-05)]_16_[+5(3.88e-05)]_\ 9 chr16:2682219-2682719 2.73e-02 43_[+1(7.88e-05)]_41 chrUn_KI270467v1:2038-25 2.74e-12 29_[+3(4.42e-15)]_12_[+9(3.08e-07)]_\ 13 chr10:50067621-50068121 6.55e-13 18_[+8(3.40e-20)]_16_[+6(7.49e-05)]_\ 4 chr15:84980629-84981129 2.28e-01 100 chr16:28924634-28925134 4.03e-03 18_[-1(5.03e-05)]_1_[-1(8.76e-05)]_\ 49 chr19:4723769-4724269 2.84e-03 37_[+4(3.27e-07)]_32 chr5:176388744-176389244 4.82e-04 45_[-5(7.50e-05)]_14_[-5(5.69e-06)]_\ 9 chr19:35903637-35904137 1.57e-03 53_[+6(1.72e-05)]_13_[-6(4.00e-06)]_\ 10 chr10:93702438-93702938 1.07e-01 65_[-5(5.69e-06)]_19 chr1:27321854-27322354 5.34e-01 100 chr11:47578730-47579230 1.65e-01 100 chr19:17202251-17202751 1.67e-05 43_[-1(2.67e-05)]_6_[-2(1.45e-06)]_\ 1_[+6(4.89e-05)]_6 chr1:37989786-37990286 6.29e-01 100 chr6:110179723-110180223 3.74e-03 4_[+5(1.16e-05)]_36_[-5(2.78e-07)]_\ 28 chr19:6677828-6678328 1.30e-04 29_[+1(5.54e-06)]_[-6(6.81e-05)]_2_\ [+1(1.31e-06)]_25 chr1:236097023-236097523 6.00e-01 100 chr19:37594313-37594813 5.47e-01 100 chr14:24114576-24115076 6.83e-01 100 chr10:17201428-17201928 4.78e-01 100 chr19:36604694-36605194 2.64e-07 3_[-1(4.46e-05)]_23_[+4(9.42e-08)]_\ 5_[-2(1.43e-07)]_6 chr19:40570494-40570994 8.60e-04 39_[+1(2.56e-06)]_45 chr17:77233797-77234297 2.14e-08 33_[-7(7.99e-15)]_17 chr1:183471823-183472323 4.80e-11 22_[-7(7.44e-15)]_28 chr1:40257848-40258348 1.89e-02 100 chr5:1950692-1951192 1.40e-03 [-4(6.99e-05)]_69 chr19:43475186-43475686 1.60e-02 6_[+1(1.51e-05)]_1_[+1(2.67e-05)]_\ 61 chr2:241881440-241881940 1.22e-04 40_[-6(5.13e-07)]_16_[-6(1.86e-05)]_\ 20 chr19:17075237-17075737 4.53e-03 31_[-1(1.31e-06)]_53 chr19:55643343-55643843 2.35e-06 10_[+2(1.45e-06)]_27_[+6(1.86e-05)]_\ 17_[+5(4.59e-06)]_2 chr5:134371102-134371602 6.91e-05 67_[+5(2.58e-06)]_17 chr17:17206273-17206773 8.64e-04 48_[+6(1.07e-05)]_19_[+6(5.13e-07)]_\ 9 chr21:39313505-39314005 2.93e-01 82_[-10(1.38e-05)]_6 chr19:38335508-38336008 1.19e-02 100 chr6:157323332-157323832 1.48e-01 27_[-10(4.87e-05)]_61 chr14:22982550-22983050 2.41e-03 100 chr19:36114733-36115233 1.23e-01 16_[+1(1.75e-05)]_68 chr19:39390668-39391168 4.05e-04 39_[-5(4.10e-06)]_45 chr19:41310148-41310648 1.12e-01 100 chr16:88882182-88882682 1.04e-11 11_[+2(5.97e-10)]_14_[+2(9.65e-08)]_\ 5_[-4(1.03e-07)]_7 chr12:116910645-11691114 1.33e-01 43_[-6(7.83e-06)]_45 chr7:876170-876670 5.20e-01 18_[+6(4.06e-05)]_18_[+6(3.17e-05)]_\ 18_[+6(3.17e-05)]_10 chr4:77075938-77076438 5.63e-02 17_[-10(5.95e-05)]_71 chr19:46600765-46601265 1.96e-01 74_[-5(8.58e-05)]_10 chr12:49060548-49061048 4.30e-03 26_[-8(6.84e-05)]_24 chr1:54715544-54716044 1.27e-03 24_[+6(5.13e-07)]_64 chr17:82273275-82273775 1.43e-03 5_[-1(3.80e-06)]_79 chrX:73944015-73944515 4.33e-01 100 chr1:25998135-25998635 6.03e-04 50_[+5(9.21e-07)]_34 chr12:132828692-13282919 8.08e-02 55_[+5(5.69e-06)]_29 chr12:12266881-12267381 2.96e-01 100 chr12:57752241-57752741 5.51e-04 15_[-5(1.78e-06)]_2_[+1(3.05e-05)]_\ 51 chr1:3992025-3992525 6.39e-04 13_[-4(1.86e-07)]_1_[-4(3.68e-05)]_\ 24 chr12:1907471-1907971 2.55e-03 26_[+1(2.02e-05)]_22_[+1(2.02e-05)]_\ 20 chr21:44810816-44811316 4.70e-11 2_[+4(2.58e-07)]_1_[-2(5.97e-10)]_\ 12_[+4(1.25e-11)]_7 chr17:7836739-7837239 3.12e-02 39_[+10(2.14e-05)]_49 chr19:38402953-38403453 8.60e-02 1_[-4(1.96e-05)]_31_[-4(6.73e-05)]_\ 6 chr19:33080940-33081440 6.72e-04 29_[-6(2.17e-06)]_59 chr8:25458845-25459345 8.48e-01 100 chr1:154558621-154559121 4.14e-03 100 chr17:78558297-78558797 4.10e-02 100 chr16:1271747-1272247 8.24e-01 100 chr15:67254496-67254996 1.89e-02 54_[+6(2.38e-05)]_34 chrUn_KI270467v1:2770-32 2.52e-22 5_[+3(1.61e-13)]_14_[+7(1.54e-18)] chr10:101830475-10183097 1.82e-14 6_[-2(2.25e-10)]_[-2(5.06e-09)]_10_\ [+6(3.17e-05)]_40 chr1:228109140-228109640 1.34e-02 45_[-6(5.62e-06)]_21_[-6(9.18e-05)]_\ 10 chr19:40444335-40444835 3.43e-01 100 chr19:17337092-17337592 4.12e-04 2_[+5(1.53e-05)]_82 chr19:1652592-1653092 4.03e-01 100 chrX:15737879-15738379 2.72e-04 4_[+1(1.31e-06)]_4_[+1(3.48e-05)]_\ 30_[-6(4.89e-05)]_18 chr10:97687168-97687668 8.51e-04 32_[+1(1.03e-06)]_52 chr19:35557995-35558495 5.60e-04 26_[-5(1.53e-05)]_58 chr17:7242740-7243240 4.25e-02 22_[-4(4.35e-05)]_47 chr15:65868966-65869466 4.28e-04 8_[-1(9.37e-06)]_76 chr19:49363383-49363883 1.12e-02 77_[-6(1.95e-05)]_11 chr10:132752267-13275276 9.18e-05 18_[-4(4.70e-06)]_4_[+1(6.33e-05)]_\ 2_[-6(9.26e-06)]_17 chr16:30957582-30958082 8.86e-01 100 chr19:47778292-47778792 3.75e-02 46_[-5(2.58e-06)]_38 chr16:89008739-89009239 2.62e-02 1_[-1(3.48e-05)]_18_[-1(9.37e-06)]_\ 17_[-1(9.37e-06)]_16 chr19:39125748-39126248 3.47e-05 41_[+1(3.71e-07)]_43 chr9:132944470-132944970 4.12e-01 100 chr6:169840137-169840637 1.24e-07 12_[-1(1.02e-07)]_5_[-1(5.03e-05)]_\ 8_[-1(1.29e-05)]_8_[-2(3.76e-07)]_3 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (10) found. ******************************************************************************** CPU: surya ********************************************************************************