# DREME 4.12.0
#     command: dreme -v 1 -oc /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/IKZF3.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/dreme_out -png -dna -p /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/IKZF3.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/seqs-centered -n /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/IKZF3.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/seqs-shuffled
#   positives: 600 from /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/IKZF3.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/seqs-centered (Tue Jul 03 14:03:38 PDT 2018)
#   negatives: 600 from /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/IKZF3.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/seqs-shuffled (Tue Jul 03 14:03:38 PDT 2018)
#        host: kadru
#        when: Tue Jul 03 14:50:22 PDT 2018

MEME version 4.12.0

ALPHABET "DNA" DNA-LIKE
A "Adenine" CC0000 ~ T "Thymine" 008000
C "Cytosine" 0000CC ~ G "Guanine" FFB300
N "Any base" = ACGT
X = ACGT
. = ACGT
V "Not T" = ACG
H "Not G" = ACT
D "Not C" = AGT
B "Not A" = CGT
M "Amino" = AC
R "Purine" = AG
W "Weak" = AT
S "Strong" = CG
Y "Pyrimidine" = CT
K "Keto" = GT
U = T
END ALPHABET

strands: + -

Background letter frequencies (from dataset):
A 0.227 C 0.268 G 0.282 T 0.223


MOTIF TTCCYR DREME-1

#             Word    RC Word        Pos        Neg    P-value    E-value
# BEST      TTCCYR     YRGGAA        234        127   9.8e-012   3.2e-007
#           TTCCTG     CAGGAA         94         44   3.8e-006   1.2e-001
#           TTCCCA     TGGGAA         87         51   7.3e-004   2.4e+001
#           TTCCCG     CGGGAA         38         17   2.7e-003   8.6e+001
#           TTCCTA     TAGGAA         43         21   3.3e-003   1.1e+002

letter-probability matrix: alength= 4 w= 6 nsites= 278 E= 3.2e-007
0.000000 0.000000 0.000000 1.000000
0.000000 0.000000 0.000000 1.000000
0.000000 1.000000 0.000000 0.000000
0.000000 1.000000 0.000000 0.000000
0.000000 0.496403 0.000000 0.503597
0.507194 0.000000 0.492806 0.000000


MOTIF CTGGRA DREME-2

#             Word    RC Word        Pos        Neg    P-value    E-value
# BEST      CTGGRA     TYCCAG        157         80   1.4e-008   4.5e-004
#           CTGGGA     TCCCAG         90         41   3.6e-006   1.1e-001
#           CTGGAA     TTCCAG         78         41   2.3e-004   7.4e+000

letter-probability matrix: alength= 4 w= 6 nsites= 176 E= 4.5e-004
0.000000 1.000000 0.000000 0.000000
0.000000 0.000000 0.000000 1.000000
0.000000 0.000000 1.000000 0.000000
0.000000 0.000000 1.000000 0.000000
0.448864 0.000000 0.551136 0.000000
1.000000 0.000000 0.000000 0.000000


# Stopping reason: E-value threshold exceeded
#    Running time: 11.95 seconds