Database and Motifs High-scoring Motif Occurences Debugging Information



FIMO - Motif search tool

FIMO version 4.12.0, (Release date: Tue Jun 27 16:22:50 2017 -0700)

For further information on how to interpret these results or to get a copy of the FIMO software please access http://meme.nbcr.net

If you use FIMO in your research, please cite the following paper:
Charles E. Grant, Timothy L. Bailey, and William Stafford Noble, "FIMO: Scanning for occurrences of a given motif", Bioinformatics, 27(7):1017-1018, 2011. [full text]


DATABASE AND MOTIFS

DATABASE /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/HIC1.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResultsDefaultMax/HIC1.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa
Database contains 600 sequences, 300000 residues

MOTIFS /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/HIC1.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResultsDefaultMax/dreme_out/dreme.xml (DNA)

MOTIF WIDTH BEST POSSIBLE MATCH
GBTGGCA 7 GCTGGCA
TGACTCA 7 TGACTCA
HGGGCA 6 TGGGCA
CMGGAA 6 CAGGAA
GAYGTCA 7 GATGTCA
CCTCYTCC 8 CCTCCTCC

Random model letter frequencies (/srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/HIC1.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResultsDefaultMax/background):
A 0.197 C 0.303 G 0.303 T 0.197


SECTION I: HIGH-SCORING MOTIF OCCURENCES

Motif ID Alt ID Sequence Name Strand Start End p-value q-value Matched Sequence
CCTCYTCC DREME-6 chr19 + 588334 588341 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chrX + 1591510 1591517 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chr12 - 1661856 1661863 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chr1 - 2391246 2391253 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chr19 - 2474777 2474784 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chr17 + 2593136 2593143 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chr17 + 2593542 2593549 3.01e-05 0.107 cctcctcc
CCTCYTCC DREME-6 chr16 - 3152444 3152451 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chr10 + 5412679 5412686 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chr12 + 6336740 6336747 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chr19 + 10502185 10502192 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chr16 + 12120828 12120835 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chr16 - 14975147 14975154 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chr16 - 15590896 15590903 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chrX - 15737944 15737951 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chr1 + 16217657 16217664 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chr1 + 16352070 16352077 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chr1 - 16352235 16352242 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chr22 + 20917272 20917279 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chr7 - 23182169 23182176 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chr17 + 27353664 27353671 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chr10 - 28533178 28533185 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chr10 - 28533181 28533188 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chr10 - 28533184 28533191 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chr10 - 28533233 28533240 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chr10 - 28533241 28533248 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chr10 - 28533259 28533266 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chr10 - 28533274 28533281 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chr16 - 30371025 30371032 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chr17 - 30600481 30600488 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chr16 + 30957688 30957695 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chr20 - 31573052 31573059 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chr6 - 31806962 31806969 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chr1 + 32062473 32062480 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chr19 - 33249474 33249481 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chr19 + 33274005 33274012 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chr19 + 33521875 33521882 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chr7 - 36153194 36153201 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chr1 + 36386569 36386576 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chr1 + 36386572 36386579 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chr17 - 36545628 36545635 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chr17 - 36545684 36545691 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chr17 - 36545756 36545763 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chr17 + 36545868 36545875 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chr19 - 38403569 38403576 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chr22 + 39534768 39534775 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chr19 - 40444712 40444719 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chr19 + 40603728 40603735 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chr19 - 40605492 40605499 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chr15 - 41230820 41230827 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chr5 - 41925455 41925462 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chr15 + 44195200 44195207 3.01e-05 0.107 cctcctcc
CCTCYTCC DREME-6 chr15 + 44195212 44195219 3.01e-05 0.107 cctcctcc
CCTCYTCC DREME-6 chr19 - 45769330 45769337 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chr17 + 45894641 45894648 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chr17 - 47896457 47896464 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chrX - 48597981 48597988 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chr3 + 48898653 48898660 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chr3 - 48898924 48898931 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chr13 - 48976245 48976252 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chr13 + 48976544 48976551 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chr20 + 49046396 49046403 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chr19 - 49640958 49640965 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chr13 + 51584343 51584350 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chr19 + 54159604 54159611 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chr5 - 55535010 55535017 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chr4 + 55948908 55948915 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chr12 + 57112439 57112446 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chr3 + 57556003 57556010 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chr19 + 58278600 58278607 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chr2 - 64524371 64524378 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chr2 - 64524380 64524387 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chr11 + 65477421 65477428 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chr11 - 65884725 65884732 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chr15 + 66883434 66883441 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chr1 - 67685330 67685337 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chr15 - 68277948 68277955 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chr5 - 69492533 69492540 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chr5 - 69492742 69492749 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chr15 - 70763734 70763741 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chr15 - 72783902 72783909 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chr10 - 74151363 74151370 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chr13 + 75482364 75482371 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chr13 + 75482400 75482407 3.01e-05 0.107 cctcctcc
CCTCYTCC DREME-6 chr7 + 75915359 75915366 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chr12 - 76764135 76764142 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chr12 - 76764138 76764145 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chr12 - 76764244 76764251 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chr17 + 79811799 79811806 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chr17 + 82359239 82359246 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chr14 + 91060421 91060428 3.01e-05 0.107 cCTCCTCC
CCTCYTCC DREME-6 chr14 + 91060424 91060431 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chr14 + 91060606 91060613 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chr14 - 91573715 91573722 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chr14 - 91573737 91573744 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chr14 - 91573773 91573780 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chr14 - 91573810 91573817 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chr14 - 91573861 91573868 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chr14 - 91573864 91573871 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chr14 - 91573883 91573890 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chr14 - 91573898 91573905 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chr14 - 91573901 91573908 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chr14 - 91573920 91573927 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chr14 - 91573935 91573942 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chr14 - 91573938 91573945 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chr14 - 91573973 91573980 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chr14 - 91573976 91573983 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chr14 - 91574010 91574017 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chr14 - 91574013 91574020 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chr14 - 91574028 91574035 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chr1 + 93779843 93779850 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chr12 + 95217623 95217630 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chr7 - 101244876 101244883 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chr10 - 101818676 101818683 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chr12 - 103965879 103965886 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chr7 + 105012877 105012884 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chr6 - 111873680 111873687 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chr6 - 111873683 111873690 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chr1 - 111990110 111990117 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chr8 - 119873848 119873855 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chr1 + 121519400 121519407 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chr8 + 123156947 123156954 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chr9 - 124862345 124862352 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chr9 - 125143529 125143536 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chr9 + 125143572 125143579 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chr2 - 127064676 127064683 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chr4 + 127965336 127965343 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chrX - 135052348 135052355 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chr9 - 136849403 136849410 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chr9 - 136849419 136849426 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chr7 + 140924564 140924571 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chr1 - 149939196 149939203 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chr1 + 153566747 153566754 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chr1 - 153923172 153923179 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chr1 - 154324651 154324658 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chr1 + 154324689 154324696 3.01e-05 0.107 cctcctCC
CCTCYTCC DREME-6 chr1 + 154558756 154558763 3.01e-05 0.107 cctcctcc
CCTCYTCC DREME-6 chr1 + 154558759 154558766 3.01e-05 0.107 cctcctcc
CCTCYTCC DREME-6 chr1 + 154558762 154558769 3.01e-05 0.107 cctcctcc
CCTCYTCC DREME-6 chr1 + 154558765 154558772 3.01e-05 0.107 cctcctcc
CCTCYTCC DREME-6 chr1 + 154558768 154558775 3.01e-05 0.107 cctcctcc
CCTCYTCC DREME-6 chr1 + 154558822 154558829 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chr1 + 155017509 155017516 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chr6 + 156778032 156778039 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chr6 + 156778035 156778042 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chr6 + 156778038 156778045 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chr6 + 156778041 156778048 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chr6 + 156778044 156778051 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chr6 + 158644680 158644687 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chr6 + 158645044 158645051 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chr6 + 169702285 169702292 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chr3 - 173395719 173395726 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chr1 + 179954796 179954803 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chr1 - 193122104 193122111 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chr1 - 193122107 193122114 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chr3 - 194134827 194134834 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chr2 + 197515988 197515995 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chr1 + 205211589 205211596 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chr1 - 205211616 205211623 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chr1 + 212608608 212608615 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chr1 + 229221483 229221490 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chr1 - 234724153 234724160 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chr2 - 241881461 241881468 3.01e-05 0.107 CCTCCTCC
CCTCYTCC DREME-6 chr19 - 588696 588703 4.96e-05 0.133 CCTCTTCC
CCTCYTCC DREME-6 chr9 + 1458920 1458927 4.96e-05 0.133 CCTCTTCC
CCTCYTCC DREME-6 chrX + 1591566 1591573 4.96e-05 0.133 CCTCTTCC
CCTCYTCC DREME-6 chr18 - 11981263 11981270 4.96e-05 0.133 CCTCTTCC
CCTCYTCC DREME-6 chr18 - 11981320 11981327 4.96e-05 0.133 CCTCTTCC
CCTCYTCC DREME-6 chr5 + 14156573 14156580 4.96e-05 0.133 cctcttcc
CCTCYTCC DREME-6 chr1 + 22052601 22052608 4.96e-05 0.133 CCTCTTCC
CCTCYTCC DREME-6 chr12 + 25334097 25334104 4.96e-05 0.133 cctcttcc
CCTCYTCC DREME-6 chr17 + 27353580 27353587 4.96e-05 0.133 CCTCTTCC
CCTCYTCC DREME-6 chr1 + 32062610 32062617 4.96e-05 0.133 CCTCTTCC
CCTCYTCC DREME-6 chr6 + 32971854 32971861 4.96e-05 0.133 CCTCTTCC
CCTCYTCC DREME-6 chr19 - 33521621 33521628 4.96e-05 0.133 CCTCTTCC
CCTCYTCC DREME-6 chr13 + 33542777 33542784 4.96e-05 0.133 CCTCTTCC
CCTCYTCC DREME-6 chr7 + 36153049 36153056 4.96e-05 0.133 CCTCTTCC
CCTCYTCC DREME-6 chr19 - 39110695 39110702 4.96e-05 0.133 CCTCTTCC
CCTCYTCC DREME-6 chr7 - 42912232 42912239 4.96e-05 0.133 CCTCTTCC
CCTCYTCC DREME-6 chr19 - 43504767 43504774 4.96e-05 0.133 CCTCTTCC
CCTCYTCC DREME-6 chr20 - 44729130 44729137 4.96e-05 0.133 CCTCTTCC
CCTCYTCC DREME-6 chr1 - 47690764 47690771 4.96e-05 0.133 CCTCTTCC
CCTCYTCC DREME-6 chr12 + 53379480 53379487 4.96e-05 0.133 CCTCTTCC
CCTCYTCC DREME-6 chr4 - 55948709 55948716 4.96e-05 0.133 CCTCTTCC
CCTCYTCC DREME-6 chr12 - 57112394 57112401 4.96e-05 0.133 CCTCTTCC
CCTCYTCC DREME-6 chr1 + 59814600 59814607 4.96e-05 0.133 CCTCTTCC
CCTCYTCC DREME-6 chr2 - 64524401 64524408 4.96e-05 0.133 CCTCTTCC
CCTCYTCC DREME-6 chr15 + 72783741 72783748 4.96e-05 0.133 CCTCTTCC
CCTCYTCC DREME-6 chr15 + 72784151 72784158 4.96e-05 0.133 CCTCTTCC
CCTCYTCC DREME-6 chr13 + 75482551 75482558 4.96e-05 0.133 CCTCTTCC
CCTCYTCC DREME-6 chr17 - 75941233 75941240 4.96e-05 0.133 CCTCTTCC
CCTCYTCC DREME-6 chr4 + 83013021 83013028 4.96e-05 0.133 CCTCTTCC
CCTCYTCC DREME-6 chr1 + 88684006 88684013 4.96e-05 0.133 CCTCTTCC
CCTCYTCC DREME-6 chr6 + 89080345 89080352 4.96e-05 0.133 cctcttcc
CCTCYTCC DREME-6 chr6 - 89829974 89829981 4.96e-05 0.133 CCTCTTCC
CCTCYTCC DREME-6 chr1 + 93779656 93779663 4.96e-05 0.133 CCTCTTCC
CCTCYTCC DREME-6 chr1 + 93779836 93779843 4.96e-05 0.133 CCTCTTCC
CCTCYTCC DREME-6 chr7 - 95596763 95596770 4.96e-05 0.133 CCTCTTCC
CCTCYTCC DREME-6 chr7 - 100428960 100428967 4.96e-05 0.133 CCTCTTCC
CCTCYTCC DREME-6 chr14 + 105481258 105481265 4.96e-05 0.133 CCTCTTCC
CCTCYTCC DREME-6 chr1 + 109984705 109984712 4.96e-05 0.133 CCTCTTCC
CCTCYTCC DREME-6 chr6 - 111568525 111568532 4.96e-05 0.133 CCTCTTCC
CCTCYTCC DREME-6 chr1 - 111755484 111755491 4.96e-05 0.133 CCTCTTCC
CCTCYTCC DREME-6 chr9 + 131678827 131678834 4.96e-05 0.133 CCTCTTCC
CCTCYTCC DREME-6 chr7 + 135170716 135170723 4.96e-05 0.133 CCTCTTCC
CCTCYTCC DREME-6 chr1 + 155262407 155262414 4.96e-05 0.133 CCTCTTCC
CCTCYTCC DREME-6 chr1 + 155857119 155857126 4.96e-05 0.133 CCTCTTCC
CCTCYTCC DREME-6 chr6 + 156778071 156778078 4.96e-05 0.133 CCTCTTCC
CCTCYTCC DREME-6 chr3 + 157160496 157160503 4.96e-05 0.133 CCTCTTCC
CCTCYTCC DREME-6 chr1 - 159916626 159916633 4.96e-05 0.133 CCTCTTCC
CCTCYTCC DREME-6 chr1 - 170532328 170532335 4.96e-05 0.133 CCTCTTCC
CCTCYTCC DREME-6 chr5 - 177517229 177517236 4.96e-05 0.133 CCTCTTCC
CCTCYTCC DREME-6 chr3 + 185537469 185537476 4.96e-05 0.133 CCTCTTCC
CCTCYTCC DREME-6 chr3 + 185537887 185537894 4.96e-05 0.133 cctcttcc
CCTCYTCC DREME-6 chr1 - 193122113 193122120 4.96e-05 0.133 CCTCTTCC
CCTCYTCC DREME-6 chr1 - 222713358 222713365 4.96e-05 0.133 CCTCTTCC
CCTCYTCC DREME-6 chr1 + 225426882 225426889 4.96e-05 0.133 CCTCTTCC
CCTCYTCC DREME-6 chr1 - 1064340 1064347 9.92e-05 0.219 CCTCGTCC
CCTCYTCC DREME-6 chr11 + 1863644 1863651 9.92e-05 0.219 CCTCGTCC
CCTCYTCC DREME-6 chr16 - 2882824 2882831 9.92e-05 0.219 CCTCATCC
CCTCYTCC DREME-6 chr16 - 3152486 3152493 9.92e-05 0.219 CCTCATCC
CCTCYTCC DREME-6 chr17 + 3890402 3890409 9.92e-05 0.219 CCTCATCC
CCTCYTCC DREME-6 chr17 + 3890419 3890426 9.92e-05 0.219 CCTCATCc
CCTCYTCC DREME-6 chr17 + 9575682 9575689 9.92e-05 0.219 CCTCATCC
CCTCYTCC DREME-6 chr1 + 16146518 16146525 9.92e-05 0.219 CCTCGTCC
CCTCYTCC DREME-6 chr20 + 21303229 21303236 9.92e-05 0.219 CCTCATCC
CCTCYTCC DREME-6 chr16 + 30558485 30558492 9.92e-05 0.219 CCTCATCC
CCTCYTCC DREME-6 chr1 - 32817703 32817710 9.92e-05 0.219 CCTCGTCC
CCTCYTCC DREME-6 chr11 - 36150008 36150015 9.92e-05 0.219 CCTCATCC
CCTCYTCC DREME-6 chr17 - 40140589 40140596 9.92e-05 0.219 CCTCGTCC
CCTCYTCC DREME-6 chr22 - 41800481 41800488 9.92e-05 0.219 CCTCGTCC
CCTCYTCC DREME-6 chr5 - 41925464 41925471 9.92e-05 0.219 CCTCATCC
CCTCYTCC DREME-6 chr17 - 45371892 45371899 9.92e-05 0.219 CCTCATCC
CCTCYTCC DREME-6 chr22 + 46773953 46773960 9.92e-05 0.219 ccTCATCC
CCTCYTCC DREME-6 chr20 - 49046481 49046488 9.92e-05 0.219 CCTCATCC
CCTCYTCC DREME-6 chr12 + 53079327 53079334 9.92e-05 0.219 CCTCATCC
CCTCYTCC DREME-6 chr5 + 55535151 55535158 9.92e-05 0.219 CCTCATCC
CCTCYTCC DREME-6 chr17 - 56914320 56914327 9.92e-05 0.219 CCTCATCC
CCTCYTCC DREME-6 chr1 - 58784222 58784229 9.92e-05 0.219 CCTCATCC
CCTCYTCC DREME-6 chr11 - 62621989 62621996 9.92e-05 0.219 CCTCGTCC
CCTCYTCC DREME-6 chr15 - 66886593 66886600 9.92e-05 0.219 CCTCATCC
CCTCYTCC DREME-6 chr5 - 67015850 67015857 9.92e-05 0.219 CCTCATCC
CCTCYTCC DREME-6 chr15 - 70494349 70494356 9.92e-05 0.219 CCTCATCC
CCTCYTCC DREME-6 chr17 + 79811658 79811665 9.92e-05 0.219 CCTCGTCC
CCTCYTCC DREME-6 chr4 + 83013035 83013042 9.92e-05 0.219 CCTCGTCC
CCTCYTCC DREME-6 chr1 + 93780025 93780032 9.92e-05 0.219 CCTCATCC
CCTCYTCC DREME-6 chr13 - 96053129 96053136 9.92e-05 0.219 CCTCGTCC
CCTCYTCC DREME-6 chr10 + 100913147 100913154 9.92e-05 0.219 CCTCATCC
CCTCYTCC DREME-6 chr13 + 110870490 110870497 9.92e-05 0.219 CCTCATCC
CCTCYTCC DREME-6 chr1 + 112700988 112700995 9.92e-05 0.219 CCTCATCC
CCTCYTCC DREME-6 chr9 + 129496702 129496709 9.92e-05 0.219 CCTCGTCC
CCTCYTCC DREME-6 chr6 - 136403149 136403156 9.92e-05 0.219 CCTCATCC
CCTCYTCC DREME-6 chr5 - 144189923 144189930 9.92e-05 0.219 CCTCATCC
CCTCYTCC DREME-6 chr5 - 150459298 150459305 9.92e-05 0.219 CCTCATCC
CCTCYTCC DREME-6 chr5 + 150497676 150497683 9.92e-05 0.219 CCTCATCC
CCTCYTCC DREME-6 chr2 - 152096245 152096252 9.92e-05 0.219 CCTCATCC
CCTCYTCC DREME-6 chr1 + 155017730 155017737 9.92e-05 0.219 CCTCATCC
CCTCYTCC DREME-6 chr1 - 156660338 156660345 9.92e-05 0.219 CCTCATCC
CCTCYTCC DREME-6 chr1 - 159916560 159916567 9.92e-05 0.219 CCTCATCC
CCTCYTCC DREME-6 chr5 + 177516982 177516989 9.92e-05 0.219 CCTCATCC
CCTCYTCC DREME-6 chr1 - 225653730 225653737 9.92e-05 0.219 CCTCATCC
CCTCYTCC DREME-6 chr1 + 229558829 229558836 9.92e-05 0.219 CCTCGTCC
CCTCYTCC DREME-6 chr1 - 229558988 229558995 9.92e-05 0.219 CCTCGTCC

DEBUGGING INFORMATION

Command line:

/software/meme/4.12.0/bin/fimo --parse-genomic-coord --verbosity 1 --oc /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/HIC1.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResultsDefaultMax/fimo_out_8 --bgfile /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/HIC1.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResultsDefaultMax/background --motif CCTCYTCC /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/HIC1.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResultsDefaultMax/dreme_out/dreme.xml /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/HIC1.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResultsDefaultMax/HIC1.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa

Settings:

output_directory = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/HIC1.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResultsDefaultMax/fimo_out_8 MEME file name = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/HIC1.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResultsDefaultMax/dreme_out/dreme.xml sequence file name = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/HIC1.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResultsDefaultMax/HIC1.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa
background file name = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/HIC1.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResultsDefaultMax/background alphabet = DNA max stored scores = 100000
allow clobber = true compute q-values = true parse genomic coord. = true
text only = false scan both strands = true max strand = false
threshold type = p-value output theshold = 0.0001 pseudocount = 0.1
alpha = 1 verbosity = 1

This information can be useful in the event you wish to report a problem with the FIMO software.


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