#Query ID Target ID Optimal offset p-value E-value q-value Overlap Query consensus Target consensus Orientation 1 1 0 0 0 0 31 ACACACACACACACACACACACACACACACA ACACACACACACACACACACACACACACACA + 2 2 0 8.26435e-21 2.14873e-19 4.29746e-19 9 CTGCCAGCC CTGCCAGCC + 2 5 -1 8.18524e-06 0.000212816 0.000145858 7 CTGCCAGCC TGCCAGC - 2 4 0 8.41487e-06 0.000218787 0.000145858 9 CTGCCAGCC ATGCCCACC - 2 9 -1 3.59302e-05 0.000934185 0.000467093 6 CTGCCAGCC TGCCCA - 2 10 3 0.00596482 0.155085 0.0620341 6 CTGCCAGCC GGGTTGCCC + 3 3 0 1.86629e-18 4.85235e-17 9.7047e-17 9 GTGAGTCAC GTGAGTCAC + 3 11 -1 1.41905e-08 3.68954e-07 3.68954e-07 7 GTGAGTCAC TGAGTCA - 3 26 0 1.25862e-05 0.000327242 0.000158453 9 GTGAGTCAC ATGAGTCACCC - 3 21 2 0.000151124 0.00392922 0.00112263 8 GTGAGTCAC TGCTGAGTCA + 4 4 0 2.09936e-25 5.45834e-24 1.09167e-23 9 GGTGGGCAT GGTGGGCAT + 4 2 0 3.40376e-05 0.000884978 0.000884978 9 GGTGGGCAT GGCTGGCAG - 4 10 -3 0.000841908 0.0218896 0.0145931 6 GGTGGGCAT GGGCAACCC - 4 9 -2 0.00196987 0.0512166 0.0256083 6 GGTGGGCAT TGGGCA + 5 5 0 9.25431e-14 2.40612e-12 4.81224e-12 7 GCTGGCA GCTGGCA + 5 2 1 6.46187e-05 0.00168009 0.00168009 7 GCTGGCA GGCTGGCAG - 5 9 -1 0.00368246 0.0957439 0.0638293 6 GCTGGCA TGGGCA + 5 19 0 0.00715713 0.186085 0.0871919 7 GCTGGCA GATGTCA + 5 6 9 0.0102274 0.265911 0.0871919 7 GCTGGCA TCCCAAAGTGCTGGGATTACAG - 5 4 1 0.0109191 0.283897 0.0871919 7 GCTGGCA GGTGGGCAT + 6 6 0 1.44321e-37 3.75234e-36 7.50469e-36 22 CTGTAATCCCAGCACTTTGGGA CTGTAATCCCAGCACTTTGGGA + 7 7 0 1.82169e-44 4.73639e-43 9.47278e-43 16 GGCGGGGGGGAGGGGG GGCGGGGGGGAGGGGG + 7 25 -8 0.000362971 0.00943725 0.00943725 8 GGCGGGGGGGAGGGGG GGAGGAGG - 8 8 0 0 0 0 31 TCTGATATTTTAAGTACAGAATACAATACAT TCTGATATTTTAAGTACAGAATACAATACAT + 9 9 0 5.95977e-11 1.54954e-09 3.09908e-09 6 TGGGCA TGGGCA + 9 2 2 0.000201757 0.00524568 0.00524568 6 TGGGCA GGCTGGCAG - 9 4 2 0.00218888 0.0569109 0.0379406 6 TGGGCA GGTGGGCAT + 9 5 1 0.00335691 0.0872796 0.0436398 6 TGGGCA GCTGGCA + 9 10 -1 0.00425596 0.110655 0.044262 5 TGGGCA GGGCAACCC - 10 10 0 1.07067e-22 2.78375e-21 5.56751e-21 9 GGGTTGCCC GGGTTGCCC + 10 24 0 0.00512429 0.133232 0.0943347 9 GGGTTGCCC CCAGCGCCCCCTGGTGGCCAC - 10 4 -3 0.00544239 0.141502 0.0943347 6 GGGTTGCCC ATGCCCACC - 11 11 0 6.06055e-10 1.57574e-08 3.15149e-08 7 TGACTCA TGACTCA + 11 3 1 7.87792e-08 2.04826e-06 2.04826e-06 7 TGACTCA GTGACTCAC - 11 21 0 7.61579e-05 0.00198011 0.000987733 7 TGACTCA TGACTCAGCA - 11 26 3 0.000183463 0.00477003 0.00159001 7 TGACTCA GGGTGACTCAT + 12 12 0 1.32207e-30 3.43739e-29 6.87478e-29 12 ATGACATCATCT ATGACATCATCT + 12 16 2 5.18176e-08 1.34726e-06 6.73629e-07 12 ATGACATCATCT CGATGACGTCATCG + 12 22 1 7.98843e-08 2.07699e-06 8.30796e-07 11 ATGACATCATCT AATGACGTCACC - 12 20 2 1.17857e-06 3.06427e-05 8.75507e-06 12 ATGACATCATCT TGATGACGTCACCG + 12 14 2 4.05306e-06 0.00010538 2.60666e-05 12 ATGACATCATCT TGATGACGTCATCA - 12 19 -1 2.77771e-05 0.000722204 0.00013131 7 ATGACATCATCT TGACATC - 12 13 -1 0.000886327 0.0230445 0.00384075 9 ATGACATCATCT TGACGTCAC - 12 23 -2 0.00660456 0.171719 0.0228958 9 ATGACATCATCT GACGTCACG - 12 18 0 0.0265201 0.689522 0.0811202 11 ATGACATCATCT GTCACGTGACC - 13 13 0 4.37339e-21 1.13708e-19 2.27416e-19 9 GTGACGTCA GTGACGTCA + 13 22 1 1.34056e-06 3.48546e-05 2.47908e-05 9 GTGACGTCA GGTGACGTCATT + 13 20 2 1.43024e-06 3.71862e-05 2.47908e-05 9 GTGACGTCA CGGTGACGTCATCA - 13 16 2 1.15683e-05 0.000300775 0.000112144 9 GTGACGTCA CGATGACGTCATCG + 13 23 1 1.48e-05 0.000384801 0.000112144 8 GTGACGTCA CGTGACGTC + 13 14 2 3.22308e-05 0.000838002 0.000186223 9 GTGACGTCA TGATGACGTCATCA + 13 18 1 0.00143746 0.037374 0.00679528 9 GTGACGTCA GGTCACGTGAC + 13 12 2 0.0110689 0.287792 0.0383723 9 GTGACGTCA AGATGATGTCAT - 13 19 -1 0.0158007 0.410817 0.050313 7 GTGACGTCA TGACATC - 13 4 0 0.0258 0.6708 0.0745334 9 GTGACGTCA ATGCCCACC - 14 14 0 2.05065e-32 5.33169e-31 1.06634e-30 14 TGATGACGTCATCA TGATGACGTCATCA + 14 20 0 1.47061e-09 3.82358e-08 2.13815e-08 14 TGATGACGTCATCA CGGTGACGTCATCA - 14 16 0 2.55275e-09 6.63716e-08 2.46469e-08 14 TGATGACGTCATCA CGATGACGTCATCG - 14 22 -1 1.02497e-07 2.66493e-06 6.66233e-07 12 TGATGACGTCATCA GGTGACGTCATT + 14 12 -2 6.18136e-05 0.00160715 0.00034259 12 TGATGACGTCATCA ATGACATCATCT + 14 13 -2 7.2471e-05 0.00188425 0.00034259 9 TGATGACGTCATCA GTGACGTCA + 14 23 -4 0.000934115 0.024287 0.00373646 9 TGATGACGTCATCA GACGTCACG - 14 19 -4 0.00133768 0.0347796 0.00463728 7 TGATGACGTCATCA GATGTCA + 14 18 -1 0.00851275 0.221331 0.0245924 11 TGATGACGTCATCA GGTCACGTGAC + 15 15 0 5.51611e-20 1.43419e-18 2.86838e-18 8 CCACGTGG CCACGTGG + 15 18 2 0.000130091 0.00338236 0.00225491 8 CCACGTGG GGTCACGTGAC + 16 16 0 2.37944e-36 6.18654e-35 1.23731e-34 14 CGATGACGTCATCG CGATGACGTCATCG + 16 22 -1 9.13813e-14 2.37591e-12 1.58394e-12 12 CGATGACGTCATCG GGTGACGTCATT + 16 20 0 1.64602e-13 4.27965e-12 2.13982e-12 14 CGATGACGTCATCG TGATGACGTCACCG + 16 14 0 4.31642e-10 1.12227e-08 3.20648e-09 14 CGATGACGTCATCG TGATGACGTCATCA - 16 12 0 1.73852e-06 4.52015e-05 1.00448e-05 12 CGATGACGTCATCG AGATGATGTCAT - 16 13 -3 1.16996e-05 0.000304191 5.53074e-05 9 CGATGACGTCATCG TGACGTCAC - 16 23 -1 0.000100608 0.00261581 0.000402433 9 CGATGACGTCATCG CGTGACGTC + 16 19 -4 0.00163603 0.0425368 0.0053171 7 CGATGACGTCATCG GATGTCA + 16 18 -1 0.00223469 0.0581018 0.00645576 11 CGATGACGTCATCG GGTCACGTGAC + 17 17 0 4.6409e-10 1.20663e-08 2.41327e-08 6 CAGGAA CAGGAA + 18 18 0 6.47926e-29 1.68461e-27 3.36922e-27 11 GGTCACGTGAC GGTCACGTGAC + 18 23 0 0.000179478 0.00466643 0.00250592 9 GGTCACGTGAC CGTGACGTC + 18 15 -2 0.000192763 0.00501184 0.00250592 8 GGTCACGTGAC CCACGTGG + 18 20 1 0.000818996 0.0212939 0.00709797 11 GGTCACGTGAC CGGTGACGTCATCA - 18 13 -1 0.000968085 0.0251702 0.00719149 9 GGTCACGTGAC GTGACGTCA + 18 22 0 0.00111038 0.0288699 0.00721748 11 GGTCACGTGAC GGTGACGTCATT + 18 16 1 0.00417178 0.108466 0.0192611 11 GGTCACGTGAC CGATGACGTCATCG - 18 14 1 0.0230186 0.598483 0.0854976 11 GGTCACGTGAC TGATGACGTCATCA - 19 19 0 2.08985e-11 5.4336e-10 1.08672e-09 7 GATGTCA GATGTCA + 19 12 4 0.000140124 0.00364322 0.00364322 7 GATGTCA AGATGATGTCAT - 19 14 4 0.000504083 0.0131062 0.0051327 7 GATGTCA TGATGACGTCATCA + 19 20 4 0.000592235 0.0153981 0.0051327 7 GATGTCA TGATGACGTCACCG + 19 16 4 0.00119531 0.0310782 0.00776954 7 GATGTCA CGATGACGTCATCG + 19 22 3 0.00141665 0.036833 0.00818511 7 GATGTCA GGTGACGTCATT + 19 13 1 0.00352041 0.0915307 0.0152551 7 GATGTCA TGACGTCAC - 19 5 0 0.00514159 0.133681 0.0190973 7 GATGTCA GCTGGCA + 19 23 0 0.00613668 0.159554 0.0212738 7 GATGTCA GACGTCACG - 20 20 0 9.40025e-34 2.44407e-32 4.88813e-32 14 TGATGACGTCACCG TGATGACGTCACCG + 20 16 0 4.15954e-13 1.08148e-11 7.20987e-12 14 TGATGACGTCACCG CGATGACGTCATCG + 20 14 0 1.78291e-10 4.63556e-09 1.85422e-09 14 TGATGACGTCACCG TGATGACGTCATCA - 20 22 -1 5.59239e-10 1.45402e-08 4.15434e-09 12 TGATGACGTCACCG GGTGACGTCATT + 20 13 -3 5.1677e-06 0.00013436 2.9653e-05 9 TGATGACGTCACCG TGACGTCAC - 20 12 0 4.59523e-05 0.00119476 0.000217229 12 TGATGACGTCACCG AGATGATGTCAT - 20 23 -4 5.43296e-05 0.00141257 0.000230537 9 TGATGACGTCACCG GACGTCACG - 20 18 -1 0.00062393 0.0162222 0.00216296 11 TGATGACGTCACCG GGTCACGTGAC + 20 19 -4 0.000844719 0.0219627 0.00274534 7 TGATGACGTCACCG GATGTCA + 21 21 0 1.28126e-19 3.33128e-18 6.66256e-18 10 TGCTGAGTCA TGCTGAGTCA + 21 26 0 8.09715e-06 0.000210526 0.000210526 10 TGCTGAGTCA GGGTGACTCAT + 21 11 -3 0.00015666 0.00407315 0.00203658 7 TGCTGAGTCA TGAGTCA - 21 3 -2 0.000731075 0.0190079 0.00633598 8 TGCTGAGTCA GTGAGTCAC + 22 22 0 1.67414e-27 4.35278e-26 8.70555e-26 12 GGTGACGTCATT GGTGACGTCATT + 22 16 1 4.99466e-14 1.29861e-12 1.29861e-12 12 GGTGACGTCATT CGATGACGTCATCG + 22 20 1 2.26475e-10 5.88835e-09 1.96278e-09 12 GGTGACGTCATT TGATGACGTCACCG + 22 14 1 3.40906e-08 8.86356e-07 2.53244e-07 12 GGTGACGTCATT TGATGACGTCATCA - 22 12 1 2.07272e-06 5.38908e-05 1.19757e-05 11 GGTGACGTCATT AGATGATGTCAT - 22 13 -1 6.21011e-06 0.000161463 3.22926e-05 9 GGTGACGTCATT GTGACGTCA + 22 23 0 2.54668e-05 0.000662138 0.000101867 9 GGTGACGTCATT CGTGACGTC + 22 18 0 0.000772505 0.0200851 0.00267802 11 GGTGACGTCATT GGTCACGTGAC + 22 19 -3 0.00354984 0.0922959 0.0108583 7 GGTGACGTCATT GATGTCA + 23 23 0 1.21343e-20 3.15492e-19 6.30984e-19 9 CGTGACGTC CGTGACGTC + 23 22 0 8.99261e-07 2.33808e-05 2.33808e-05 9 CGTGACGTC GGTGACGTCATT + 23 20 1 9.88144e-06 0.000256917 0.000160063 9 CGTGACGTC CGGTGACGTCATCA - 23 13 -1 1.38557e-05 0.000360249 0.000160063 8 CGTGACGTC GTGACGTCA + 23 16 1 1.84688e-05 0.00048019 0.000160063 9 CGTGACGTC CGATGACGTCATCG + 23 18 0 0.000300597 0.00781552 0.00173678 9 CGTGACGTC GGTCACGTGAC + 23 14 1 0.0012202 0.0317251 0.00625099 9 CGTGACGTC TGATGACGTCATCA - 23 12 1 0.0117745 0.306136 0.0437337 9 CGTGACGTC AGATGATGTCAT - 23 19 -2 0.026494 0.688845 0.0861056 7 CGTGACGTC TGACATC - 24 24 0 0 0 0 21 GTGGCCACCAGGGGGCGCTGG GTGGCCACCAGGGGGCGCTGG + 24 4 -9 0.00470516 0.122334 0.0815562 9 GTGGCCACCAGGGGGCGCTGG GGTGGGCAT + 25 25 0 8.15751e-13 2.12095e-11 4.24191e-11 8 CCTCCTCC CCTCCTCC + 25 7 0 0.00147374 0.0383172 0.0383172 8 CCTCCTCC CCCCCTCCCCCCCGCC - 26 26 0 1.7899e-23 4.65373e-22 9.30746e-22 11 GGGTGACTCAT GGGTGACTCAT + 26 21 0 4.45011e-06 0.000115703 7.71352e-05 10 GGGTGACTCAT TGCTGAGTCA + 26 3 -2 1.80777e-05 0.000470019 0.000188008 9 GGGTGACTCAT GTGACTCAC - 26 11 -3 0.000135118 0.00351307 0.00100373 7 GGGTGACTCAT TGACTCA +