******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 4.12.0 (Release date: Tue Jun 27 16:22:50 2017 -0700) For further information on how to interpret these results or to get a copy of the MEME software please access http://meme-suite.org . This file may be used as input to the MAST algorithm for searching sequence databases for matches to groups of motifs. MAST is available for interactive use and downloading at http://meme-suite.org . ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** DATAFILE= /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/GLI2.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResultsDefaultMax/seqs-centered ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chr11:92331201-92331701 1.0000 100 chr13:112213419-11221391 1.0000 100 chr1:231037946-231038446 1.0000 100 chr5:124742196-124742696 1.0000 100 chr2:178484552-178485052 1.0000 100 chr6:124822064-124822564 1.0000 100 chr19:2983984-2984484 1.0000 100 chr3:44995225-44995725 1.0000 100 chr19:32398352-32398852 1.0000 100 chr1:59261502-59262002 1.0000 100 chr15:36925631-36926131 1.0000 100 chr4:23818163-23818663 1.0000 100 chr7:21941523-21942023 1.0000 100 chr17:27915608-27916108 1.0000 100 chr20:41059184-41059684 1.0000 100 chr17:40325030-40325530 1.0000 100 chr19:34234636-34235136 1.0000 100 chr5:174503806-174504306 1.0000 100 chr1:16120929-16121429 1.0000 100 chrX:136046983-136047483 1.0000 100 chr10:121831742-12183224 1.0000 100 chr4:156959197-156959697 1.0000 100 chr17:32298891-32299391 1.0000 100 chr5:88243455-88243955 1.0000 100 chr1:24043447-24043947 1.0000 100 chr10:72098722-72099222 1.0000 100 chr15:55825189-55825689 1.0000 100 chr4:156815648-156816148 1.0000 100 chr7:100264548-100265048 1.0000 100 chr12:51405731-51406231 1.0000 100 chr11:123213185-12321368 1.0000 100 chr10:74256039-74256539 1.0000 100 chr2:109261151-109261651 1.0000 100 chr5:139489857-139490357 1.0000 100 chr5:82387250-82387750 1.0000 100 chr10:89861901-89862401 1.0000 100 chr4:128393055-128393555 1.0000 100 chr8:28258758-28259258 1.0000 100 chr6:129183828-129184328 1.0000 100 chr22:38606503-38607003 1.0000 100 chr2:23921179-23921679 1.0000 100 chr12:106074939-10607543 1.0000 100 chr12:108822716-10882321 1.0000 100 chr2:100005014-100005514 1.0000 100 chr13:99677542-99678042 1.0000 100 chr10:87761898-87762398 1.0000 100 chr12:89769185-89769685 1.0000 100 chr15:96053095-96053595 1.0000 100 chr10:10989646-10990146 1.0000 100 chr1:234700146-234700646 1.0000 100 chr13:39148456-39148956 1.0000 100 chr4:38150223-38150723 1.0000 100 chr22:18020690-18021190 1.0000 100 chr11:131998015-13199851 1.0000 100 chr5:16889671-16890171 1.0000 100 chr2:212299957-212300457 1.0000 100 chr18:494175-494675 1.0000 100 chr10:20958712-20959212 1.0000 100 chr12:38890022-38890522 1.0000 100 chr1:175841774-175842274 1.0000 100 chr5:32157746-32158246 1.0000 100 chr20:25252784-25253284 1.0000 100 chr1:182175310-182175810 1.0000 100 chr3:31165433-31165933 1.0000 100 chr1:225654693-225655193 1.0000 100 chr1:85297832-85298332 1.0000 100 chr10:26524157-26524657 1.0000 100 chr6:1850783-1851283 1.0000 100 chr10:33271916-33272416 1.0000 100 chr7:26534950-26535450 1.0000 100 chr3:193970364-193970864 1.0000 100 chr2:138177637-138178137 1.0000 100 chr5:175385676-175386176 1.0000 100 chr6:16757291-16757791 1.0000 100 chr7:92534571-92535071 1.0000 100 chr1:145740173-145740673 1.0000 100 chr8:50056573-50057073 1.0000 100 chr20:46085114-46085614 1.0000 100 chr11:15370652-15371152 1.0000 100 chr13:20814580-20815080 1.0000 100 chr10:126247489-12624798 1.0000 100 chr12:107380062-10738056 1.0000 100 chr11:92868163-92868663 1.0000 100 chr15:69591895-69592395 1.0000 100 chr3:189458457-189458957 1.0000 100 chr9:23731384-23731884 1.0000 100 chr6:16754787-16755287 1.0000 100 chr10:74833360-74833860 1.0000 100 chr4:20337249-20337749 1.0000 100 chr5:59317174-59317674 1.0000 100 chr10:125633458-12563395 1.0000 100 chr2:223815123-223815623 1.0000 100 chr11:117019298-11701979 1.0000 100 chr2:196853408-196853908 1.0000 100 chr1:38724121-38724621 1.0000 100 chr13:51638390-51638890 1.0000 100 chr10:12448713-12449213 1.0000 100 chr5:32367215-32367715 1.0000 100 chr10:114525338-11452583 1.0000 100 chr14:36955972-36956472 1.0000 100 chr11:20070419-20070919 1.0000 100 chr1:212596155-212596655 1.0000 100 chr22:30195864-30196364 1.0000 100 chr5:124908916-124909416 1.0000 100 chr5:93677282-93677782 1.0000 100 chr15:70426337-70426837 1.0000 100 chr17:51650137-51650637 1.0000 100 chr6:116945718-116946218 1.0000 100 chr10:33325898-33326398 1.0000 100 chr3:171790741-171791241 1.0000 100 chr9:86731438-86731938 1.0000 100 chr5:69517658-69518158 1.0000 100 chr12:66319252-66319752 1.0000 100 chr1:169942305-169942805 1.0000 100 chr6:150403464-150403964 1.0000 100 chr2:206230212-206230712 1.0000 100 chr3:17553997-17554497 1.0000 100 chr5:78050779-78051279 1.0000 100 chr3:123431512-123432012 1.0000 100 chr18:395716-396216 1.0000 100 chr6:684067-684567 1.0000 100 chr20:57579945-57580445 1.0000 100 chr6:84362108-84362608 1.0000 100 chr14:96888511-96889011 1.0000 100 chr7:146655891-146656391 1.0000 100 chr5:34608752-34609252 1.0000 100 chr6:13006937-13007437 1.0000 100 chr5:174371579-174372079 1.0000 100 chr2:48732937-48733437 1.0000 100 chr12:66751643-66752143 1.0000 100 chr8:17540093-17540593 1.0000 100 chr3:169542254-169542754 1.0000 100 chr1:219324930-219325430 1.0000 100 chr13:42071981-42072481 1.0000 100 chr15:70526426-70526926 1.0000 100 chr17:43670017-43670517 1.0000 100 chr10:72173640-72174140 1.0000 100 chr1:3419785-3420285 1.0000 100 chr2:175805423-175805923 1.0000 100 chr8:71496063-71496563 1.0000 100 chr16:77409263-77409763 1.0000 100 chr22:42964959-42965459 1.0000 100 chr16:21820748-21821248 1.0000 100 chr1:179930918-179931418 1.0000 100 chr20:5582150-5582650 1.0000 100 chr1:237166697-237167197 1.0000 100 chr3:140186383-140186883 1.0000 100 chr3:112090493-112090993 1.0000 100 chr17:67978478-67978978 1.0000 100 chr1:175470970-175471470 1.0000 100 chr6:16849338-16849838 1.0000 100 chr5:17326442-17326942 1.0000 100 chr11:115452199-11545269 1.0000 100 chr17:71163452-71163952 1.0000 100 chr8:105090167-105090667 1.0000 100 chr3:172140650-172141150 1.0000 100 chr5:123157658-123158158 1.0000 100 chr15:70507800-70508300 1.0000 100 chr1:101288497-101288997 1.0000 100 chrX:24145691-24146191 1.0000 100 chr5:83097790-83098290 1.0000 100 chr1:240515407-240515907 1.0000 100 chr5:99900439-99900939 1.0000 100 chr5:127934854-127935354 1.0000 100 chr4:8044644-8045144 1.0000 100 chr11:93986654-93987154 1.0000 100 chr3:182365054-182365554 1.0000 100 chr21:36122964-36123464 1.0000 100 chr19:31332880-31333380 1.0000 100 chr5:125326104-125326604 1.0000 100 chr6:54879150-54879650 1.0000 100 chr11:34222874-34223374 1.0000 100 chr1:52955572-52956072 1.0000 100 chr5:34598249-34598749 1.0000 100 chr16:80982534-80983034 1.0000 100 chr14:68140202-68140702 1.0000 100 chr11:32890783-32891283 1.0000 100 chr18:74861053-74861553 1.0000 100 chr3:156161124-156161624 1.0000 100 chr5:77995984-77996484 1.0000 100 chr19:28520336-28520836 1.0000 100 chr11:72308465-72308965 1.0000 100 chr3:188272547-188273047 1.0000 100 chr1:168801355-168801855 1.0000 100 chr10:2882566-2883066 1.0000 100 chr15:71279078-71279578 1.0000 100 chr5:38782988-38783488 1.0000 100 chr10:121500888-12150138 1.0000 100 chr5:5340244-5340744 1.0000 100 chr14:73125212-73125712 1.0000 100 chr2:188573438-188573938 1.0000 100 chr2:109029732-109030232 1.0000 100 chr1:184930564-184931064 1.0000 100 chr5:107533909-107534409 1.0000 100 chr9:123687166-123687666 1.0000 100 chr6:108676484-108676984 1.0000 100 chr1:220918448-220918948 1.0000 100 chr2:24540019-24540519 1.0000 100 chr17:17958279-17958779 1.0000 100 chr15:58332055-58332555 1.0000 100 chr10:33388265-33388765 1.0000 100 chr1:68384328-68384828 1.0000 100 chr4:89847611-89848111 1.0000 100 chr1:223518464-223518964 1.0000 100 chr15:81950773-81951273 1.0000 100 chr8:71711444-71711944 1.0000 100 chr15:55740860-55741360 1.0000 100 chr20:53611352-53611852 1.0000 100 chr5:90547962-90548462 1.0000 100 chr3:186319893-186320393 1.0000 100 chr11:66789312-66789812 1.0000 100 chr4:144356317-144356817 1.0000 100 chr5:115873322-115873822 1.0000 100 chr17:68381072-68381572 1.0000 100 chr1:228902969-228903469 1.0000 100 chr5:124662172-124662672 1.0000 100 chr3:16476646-16477146 1.0000 100 chr3:171801819-171802319 1.0000 100 chr3:157477399-157477899 1.0000 100 chr1:58779925-58780425 1.0000 100 chr1:195590663-195591163 1.0000 100 chr5:90296962-90297462 1.0000 100 chr8:37380731-37381231 1.0000 100 chr6:138088174-138088674 1.0000 100 chrX:118964191-118964691 1.0000 100 chr6:8939605-8940105 1.0000 100 chr1:221393905-221394405 1.0000 100 chr6:150196077-150196577 1.0000 100 chr6:133248608-133249108 1.0000 100 chr4:173252322-173252822 1.0000 100 chr1:62311546-62312046 1.0000 100 chr12:71626706-71627206 1.0000 100 chr7:42152439-42152939 1.0000 100 chr17:35567290-35567790 1.0000 100 chr12:82861964-82862464 1.0000 100 chr1:177340505-177341005 1.0000 100 chr7:105024702-105025202 1.0000 100 chr2:111185559-111186059 1.0000 100 chr15:95556838-95557338 1.0000 100 chr14:96574836-96575336 1.0000 100 chr8:30254801-30255301 1.0000 100 chr1:3402103-3402603 1.0000 100 chr1:229218491-229218991 1.0000 100 chr7:2157574-2158074 1.0000 100 chr5:126000449-126000949 1.0000 100 chr10:15796073-15796573 1.0000 100 chr6:151357950-151358450 1.0000 100 chr10:35890236-35890736 1.0000 100 chr4:19823713-19824213 1.0000 100 chr3:9194424-9194924 1.0000 100 chrX:23944266-23944766 1.0000 100 chr3:190973652-190974152 1.0000 100 chr7:120806649-120807149 1.0000 100 chr5:136420522-136421022 1.0000 100 chr10:72580219-72580719 1.0000 100 chr10:121819030-12181953 1.0000 100 chr11:93279841-93280341 1.0000 100 chr10:99519974-99520474 1.0000 100 chrX:12240417-12240917 1.0000 100 chr4:141040992-141041492 1.0000 100 chr12:58925043-58925543 1.0000 100 chr22:24026697-24027197 1.0000 100 chr20:64030490-64030990 1.0000 100 chr9:111961498-111961998 1.0000 100 chr1:220119021-220119521 1.0000 100 chr2:38440606-38441106 1.0000 100 chr15:98896878-98897378 1.0000 100 chr15:77067292-77067792 1.0000 100 chr3:123936275-123936775 1.0000 100 chr12:114656125-11465662 1.0000 100 chr2:224678224-224678724 1.0000 100 chr8:37452591-37453091 1.0000 100 chr9:108477446-108477946 1.0000 100 chr7:114530080-114530580 1.0000 100 chr6:125913843-125914343 1.0000 100 chr10:7311240-7311740 1.0000 100 chr13:79918541-79919041 1.0000 100 chr17:48492589-48493089 1.0000 100 chr1:219279332-219279832 1.0000 100 chr3:78994503-78995003 1.0000 100 chr15:70575523-70576023 1.0000 100 chr18:49655995-49656495 1.0000 100 chr9:79256591-79257091 1.0000 100 chr19:28596479-28596979 1.0000 100 chr12:65606270-65606770 1.0000 100 chr10:101485988-10148648 1.0000 100 chr20:45017806-45018306 1.0000 100 chr4:75179433-75179933 1.0000 100 chr1:107767195-107767695 1.0000 100 chr13:87123853-87124353 1.0000 100 chr13:95289037-95289537 1.0000 100 chr1:41870101-41870601 1.0000 100 chr1:198837492-198837992 1.0000 100 chr20:51934170-51934670 1.0000 100 chr10:72097731-72098231 1.0000 100 chr13:113493289-11349378 1.0000 100 chr2:19667533-19668033 1.0000 100 chr4:185912727-185913227 1.0000 100 chr13:106096584-10609708 1.0000 100 chr20:50536242-50536742 1.0000 100 chr10:129440206-12944070 1.0000 100 chr9:86741427-86741927 1.0000 100 chr17:73575403-73575903 1.0000 100 chr21:35585875-35586375 1.0000 100 chr8:17674943-17675443 1.0000 100 chr15:58038597-58039097 1.0000 100 chr10:15704514-15705014 1.0000 100 chr21:36567184-36567684 1.0000 100 chr10:22912190-22912690 1.0000 100 chr6:43321903-43322403 1.0000 100 chr6:24583872-24584372 1.0000 100 chr17:48577408-48577908 1.0000 100 chr14:29736298-29736798 1.0000 100 chr9:14096572-14097072 1.0000 100 chr14:91149463-91149963 1.0000 100 chr1:80054122-80054622 1.0000 100 chr18:59484756-59485256 1.0000 100 chr16:12120436-12120936 1.0000 100 chr6:1839223-1839723 1.0000 100 chr6:123841208-123841708 1.0000 100 chr10:12445537-12446037 1.0000 100 chr7:51606687-51607187 1.0000 100 chr7:158097520-158098020 1.0000 100 chr3:194134843-194135343 1.0000 100 chr17:81583894-81584394 1.0000 100 chr20:20211411-20211911 1.0000 100 chr10:88181894-88182394 1.0000 100 chr16:30570496-30570996 1.0000 100 chr5:14156550-14157050 1.0000 100 chr1:219273044-219273544 1.0000 100 chr9:16953996-16954496 1.0000 100 chr1:233241765-233242265 1.0000 100 chr16:22232694-22233194 1.0000 100 chr13:21043940-21044440 1.0000 100 chr1:208747842-208748342 1.0000 100 chr5:57042467-57042967 1.0000 100 chr22:40711465-40711965 1.0000 100 chrUn_KI270467v1:2000-25 1.0000 100 chr21:34845670-34846170 1.0000 100 chr7:22548262-22548762 1.0000 100 chr10:75593192-75593692 1.0000 100 chr10:85642731-85643231 1.0000 100 chr11:70483045-70483545 1.0000 100 chr3:71102096-71102596 1.0000 100 chr6:149233306-149233806 1.0000 100 chr2:60633567-60634067 1.0000 100 chr6:89144362-89144862 1.0000 100 chr11:116853587-11685408 1.0000 100 chr1:87718279-87718779 1.0000 100 chr1:12478113-12478613 1.0000 100 chr10:63707202-63707702 1.0000 100 chr3:182697521-182698021 1.0000 100 chr10:72228276-72228776 1.0000 100 chr16:324337-324837 1.0000 100 chr5:136375846-136376346 1.0000 100 chr10:102997868-10299836 1.0000 100 chr17:70661294-70661794 1.0000 100 chr3:168975011-168975511 1.0000 100 chr4:119730134-119730634 1.0000 100 chrX:18938620-18939120 1.0000 100 chr6:11270217-11270717 1.0000 100 chr9:14153321-14153821 1.0000 100 chr1:110647215-110647715 1.0000 100 chr4:70778937-70779437 1.0000 100 chr10:87586149-87586649 1.0000 100 chr7:81299211-81299711 1.0000 100 chr4:110411670-110412170 1.0000 100 chr10:7302357-7302857 1.0000 100 chr15:36970491-36970991 1.0000 100 chr10:75294732-75295232 1.0000 100 chr3:61634650-61635150 1.0000 100 chr5:54302197-54302697 1.0000 100 chr7:70098023-70098523 1.0000 100 chr3:77191644-77192144 1.0000 100 chr14:74140209-74140709 1.0000 100 chr17:50694074-50694574 1.0000 100 chr6:134109436-134109936 1.0000 100 chr21:33136827-33137327 1.0000 100 chr6:128066839-128067339 1.0000 100 chr6:91299548-91300048 1.0000 100 chrUn_KI270467v1:2670-31 1.0000 100 chr6:39059620-39060120 1.0000 100 chr17:49976195-49976695 1.0000 100 chr5:14439319-14439819 1.0000 100 chr9:82923409-82923909 1.0000 100 chr17:14622658-14623158 1.0000 100 chr1:17787550-17788050 1.0000 100 chr7:114418010-114418510 1.0000 100 chr9:1458392-1458892 1.0000 100 chr6:82072060-82072560 1.0000 100 chr17:60173303-60173803 1.0000 100 chr10:72800366-72800866 1.0000 100 chr4:108941724-108942224 1.0000 100 chr20:20215869-20216369 1.0000 100 chr22:24727032-24727532 1.0000 100 chr8:27603165-27603665 1.0000 100 chr2:207683811-207684311 1.0000 100 chr17:44820578-44821078 1.0000 100 chr1:241460439-241460939 1.0000 100 chr3:169526186-169526686 1.0000 100 chr18:44946499-44946999 1.0000 100 chr1:6404513-6405013 1.0000 100 chr7:98476695-98477195 1.0000 100 chr6:150418319-150418819 1.0000 100 chr12:806375-806875 1.0000 100 chr10:36423717-36424217 1.0000 100 chr1:68217000-68217500 1.0000 100 chr8:37392998-37393498 1.0000 100 chr5:136729911-136730411 1.0000 100 chr9:86732360-86732860 1.0000 100 chr2:191321783-191322283 1.0000 100 chr10:121310106-12131060 1.0000 100 chr5:119270066-119270566 1.0000 100 chr9:135329983-135330483 1.0000 100 chr5:125275307-125275807 1.0000 100 chr10:23408405-23408905 1.0000 100 chrUn_KI270466v1:188-688 1.0000 100 chr5:72246989-72247489 1.0000 100 chr5:136123154-136123654 1.0000 100 chr5:14580233-14580733 1.0000 100 chr5:88516295-88516795 1.0000 100 chr20:53899425-53899925 1.0000 100 chr1:198763245-198763745 1.0000 100 chr6:56529579-56530079 1.0000 100 chr6:139152327-139152827 1.0000 100 chr5:125409101-125409601 1.0000 100 chr1:244347915-244348415 1.0000 100 chr6:21264311-21264811 1.0000 100 chr9:95721050-95721550 1.0000 100 chr4:185914645-185915145 1.0000 100 chr10:11773687-11774187 1.0000 100 chr6:167829440-167829940 1.0000 100 chr6:125050688-125051188 1.0000 100 chr9:123678562-123679062 1.0000 100 chr6:100592916-100593416 1.0000 100 chr8:108689368-108689868 1.0000 100 chr1:159916142-159916642 1.0000 100 chr14:51581284-51581784 1.0000 100 chr19:35881941-35882441 1.0000 100 chr1:214520477-214520977 1.0000 100 chr17:3890061-3890561 1.0000 100 chr4:20272369-20272869 1.0000 100 chr7:116810322-116810822 1.0000 100 chr10:112793304-11279380 1.0000 100 chr4:53943648-53944148 1.0000 100 chr4:74202024-74202524 1.0000 100 chr6:52482906-52483406 1.0000 100 chr8:124077224-124077724 1.0000 100 chr8:29126517-29127017 1.0000 100 chr2:156781572-156782072 1.0000 100 chr17:75105442-75105942 1.0000 100 chr1:16122829-16123329 1.0000 100 chr2:12303218-12303718 1.0000 100 chr6:52243258-52243758 1.0000 100 chr1:89719630-89720130 1.0000 100 chr7:70092355-70092855 1.0000 100 chr18:59455113-59455613 1.0000 100 chr9:1462599-1463099 1.0000 100 chr5:160008637-160009137 1.0000 100 chr6:137853580-137854080 1.0000 100 chr10:77305597-77306097 1.0000 100 chr10:87845974-87846474 1.0000 100 chr6:124487972-124488472 1.0000 100 chr9:86943415-86943915 1.0000 100 chr1:47690356-47690856 1.0000 100 chr20:35319244-35319744 1.0000 100 chr7:114653398-114653898 1.0000 100 chrX:24146292-24146792 1.0000 100 chr14:76486250-76486750 1.0000 100 chr7:70704760-70705260 1.0000 100 chr21:38990096-38990596 1.0000 100 chr8:99323787-99324287 1.0000 100 chr10:126233697-12623419 1.0000 100 chr9:127388333-127388833 1.0000 100 chr11:110305460-11030596 1.0000 100 chr15:70494072-70494572 1.0000 100 chrX:38060422-38060922 1.0000 100 chr22:27212593-27213093 1.0000 100 chr6:38974761-38975261 1.0000 100 chr17:71438632-71439132 1.0000 100 chr4:147768088-147768588 1.0000 100 chr5:34182251-34182751 1.0000 100 chr10:7433224-7433724 1.0000 100 chr12:41288155-41288655 1.0000 100 chr2:55843194-55843694 1.0000 100 chr5:92552245-92552745 1.0000 100 chr15:66886245-66886745 1.0000 100 chr16:22728397-22728897 1.0000 100 chr18:50629032-50629532 1.0000 100 chr1:167658652-167659152 1.0000 100 chr7:83267138-83267638 1.0000 100 chr10:129440861-12944136 1.0000 100 chr10:132700570-13270107 1.0000 100 chr1:61091491-61091991 1.0000 100 chr13:46674981-46675481 1.0000 100 chr4:118327839-118328339 1.0000 100 chr4:111883490-111883990 1.0000 100 chr13:37046921-37047421 1.0000 100 chr1:11178267-11178767 1.0000 100 chr11:88320062-88320562 1.0000 100 chr10:12720331-12720831 1.0000 100 chr7:27165479-27165979 1.0000 100 chr10:129605969-12960646 1.0000 100 chr11:115476468-11547696 1.0000 100 chr21:29217784-29218284 1.0000 100 chr19:34218184-34218684 1.0000 100 chr6:115485321-115485821 1.0000 100 chr13:21949769-21950269 1.0000 100 chr5:174514895-174515395 1.0000 100 chr10:126249961-12625046 1.0000 100 chr5:125485025-125485525 1.0000 100 chr11:32891506-32892006 1.0000 100 chr13:112346345-11234684 1.0000 100 chr18:42850138-42850638 1.0000 100 chr1:59077972-59078472 1.0000 100 chr1:3403704-3404204 1.0000 100 chr8:37359521-37360021 1.0000 100 chrX:136057527-136058027 1.0000 100 chr17:61335987-61336487 1.0000 100 chr10:22552784-22553284 1.0000 100 chr6:1667161-1667661 1.0000 100 chr3:138833420-138833920 1.0000 100 chr8:37637880-37638380 1.0000 100 chr5:124655900-124656400 1.0000 100 chr5:94469761-94470261 1.0000 100 chr3:190972921-190973421 1.0000 100 chr1:201721118-201721618 1.0000 100 chr1:59214665-59215165 1.0000 100 chr12:54033461-54033961 1.0000 100 chr2:46481488-46481988 1.0000 100 chr8:37547855-37548355 1.0000 100 chr5:124734986-124735486 1.0000 100 chr1:228781066-228781566 1.0000 100 chr6:137665268-137665768 1.0000 100 chrX:38061242-38061742 1.0000 100 chr8:37479291-37479791 1.0000 100 chr18:23684577-23685077 1.0000 100 chr7:33669144-33669644 1.0000 100 chr15:69143642-69144142 1.0000 100 chr7:80876791-80877291 1.0000 100 chr12:54052075-54052575 1.0000 100 chr2:31008532-31009032 1.0000 100 chr10:44752840-44753340 1.0000 100 chr10:75613678-75614178 1.0000 100 chr5:17305870-17306370 1.0000 100 chr5:74632108-74632608 1.0000 100 chr10:50463970-50464470 1.0000 100 chr1:229221437-229221937 1.0000 100 chr5:6419268-6419768 1.0000 100 chr15:59953466-59953966 1.0000 100 chr7:116218110-116218610 1.0000 100 chr4:80307274-80307774 1.0000 100 chr6:2028605-2029105 1.0000 100 chr3:16482918-16483418 1.0000 100 chr1:81126876-81127376 1.0000 100 chr3:42819882-42820382 1.0000 100 chr6:4320850-4321350 1.0000 100 chr8:28445242-28445742 1.0000 100 chr1:8439096-8439596 1.0000 100 chr4:110904623-110905123 1.0000 100 chr12:114914221-11491472 1.0000 100 chr9:18976681-18977181 1.0000 100 chr6:143755252-143755752 1.0000 100 chr19:33293248-33293748 1.0000 100 chr7:135716570-135717070 1.0000 100 chr1:215581871-215582371 1.0000 100 chr15:67792459-67792959 1.0000 100 chr16:25049563-25050063 1.0000 100 chr5:175378372-175378872 1.0000 100 chr14:32134446-32134946 1.0000 100 chr7:133492178-133492678 1.0000 100 chr8:109611165-109611665 1.0000 100 chr8:71355233-71355733 1.0000 100 chr6:168147142-168147642 1.0000 100 chr16:15590842-15591342 1.0000 100 chr3:194350325-194350825 1.0000 100 chr9:85743168-85743668 1.0000 100 chr10:75379151-75379651 1.0000 100 chr1:81032869-81033369 1.0000 100 chr3:17730413-17730913 1.0000 100 chr14:99821632-99822132 1.0000 100 chr5:69521066-69521566 1.0000 100 chr8:25998475-25998975 1.0000 100 chr20:53609851-53610351 1.0000 100 chr16:1271751-1272251 1.0000 100 chr1:80403329-80403829 1.0000 100 chr1:86774466-86774966 1.0000 100 chr19:40920945-40921445 1.0000 100 chr14:36835059-36835559 1.0000 100 chr10:72204287-72204787 1.0000 100 chr10:77287666-77288166 1.0000 100 chr17:34981743-34982243 1.0000 100 chr8:37360450-37360950 1.0000 100 chr3:181328985-181329485 1.0000 100 chr1:85274861-85275361 1.0000 100 chr5:124740931-124741431 1.0000 100 chr5:59303262-59303762 1.0000 100 chr8:37302614-37303114 1.0000 100 chr6:82260170-82260670 1.0000 100 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/GLI2.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResultsDefaultMax/seqs-centered -oc /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/GLI2.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResultsDefaultMax/meme_out -mod zoops -nmotifs 3 -minw 5 -maxw 50 -bfile /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/GLI2.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResultsDefaultMax/background -dna -revcomp -nostatus model: mod= zoops nmotifs= 3 evt= inf object function= E-value of product of p-values width: minw= 5 maxw= 50 width: wg= 11 ws= 1 endgaps= yes nsites: minsites= 2 maxsites= 599 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 global: substring= yes branching= no wbranch= no em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 data: n= 59900 N= 599 shuffle= -1 strands: + - sample: seed= 0 ctfrac= -1 maxwords= -1 Letter frequencies in dataset: A 0.305 C 0.195 G 0.195 T 0.305 Background letter frequencies (from /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/GLI2.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResultsDefaultMax/background): A 0.293 C 0.207 G 0.207 T 0.293 ******************************************************************************** ******************************************************************************** MOTIF WTTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTT MEME-1 width = 49 sites = 24 llr = 1036 E-value = 2.1e-248 ******************************************************************************** -------------------------------------------------------------------------------- Motif WTTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTT MEME-1 Description -------------------------------------------------------------------------------- Simplified A 31117:::a:::9:::9:::a:::9:::9:::9:::81::81:171::2 pos.-specific C 1:::::::::::1::::::::::::::::::::1:1:::1:::::1::: probability G :211:1::::::::1:::::::1:1::::::1:::::::::::1:::12 matrix T 578839a9:a9a:a9a1aa9:a99:aa91aa9:8a929a929a838a86 bits 2.3 2.0 1.8 * * ** * * * 1.6 * ** * * * ** ** ** ** * * * * Relative 1.4 ****** *** ******* *** **** ** * ** * Entropy 1.1 ************************************** ** (62.3 bits) 0.9 * ************************************** ** 0.7 *********************************************** 0.5 ************************************************* 0.2 ************************************************* 0.0 ------------------------------------------------- Multilevel TTTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTT consensus A T T T A sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WTTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTT MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ------------------------------------------------- chr3:193970364-193970864 - 27 7.53e-27 TTTAACTCAC TTTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTT TATTATACTT chr17:40325030-40325530 - 22 7.53e-27 CCCAGCCTCT TTTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTT TGAGATGGAG chr5:160008637-160009137 - 14 1.51e-26 TTCACTATTT ATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTT TGAGACAGAG chr5:139489857-139490357 + 27 1.51e-26 gagatctacc atttatttatttatttatttatttatttatttatttatttatttatttt tgagatggag chr20:41059184-41059684 - 25 1.51e-26 CCACCACCTT ATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTT CTAGCAGTTT chr5:34182251-34182751 - 23 3.54e-26 GGCCCAGATT TTTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTG TGATGGTCTC chr19:34234636-34235136 + 30 9.21e-26 tctacaagtt atttatttatttatttatttatttatttatttatttatttatttatttG gagccagagt chr22:18020690-18021190 - 27 1.16e-25 GGGCCATTTT ATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTA TTTGAGACAG chr19:31332880-31333380 - 25 2.40e-25 TCACCCCTGG ATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTGT GAGACAGGAT chr16:30570496-30570996 + 25 3.42e-25 aagcagGGGC TAttatttatttatttatttatttatttatttatttatttatttatttt tgagacggag chr19:32398352-32398852 - 27 7.43e-25 GCCAAACTTC TTTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTGA GACAGGATTT chr16:21820748-21821248 + 30 4.97e-24 ACCCCCTTGA Ctttatttatttatttatttatttatttatttatttatttattttcttt tgagaccgag chr19:35881941-35882441 - 23 5.64e-24 ATCACTTGGA TTTTATTTATTTATTTATTTATTTATTTATTTATTTATTTTTTATTTTT ATTTTTATTT chr21:36122964-36123464 - 23 6.68e-24 CATATTTTTT TATTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTTTTTG AGACAGGCTC chr5:32157746-32158246 - 32 8.51e-24 TGTGTGTGTG TGTATTTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTT GAGACAGAGT chr17:35567290-35567790 - 27 6.24e-23 CCACGCCCGG CTGATTTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTT CCTGAGATGG chr1:6404513-6405013 - 2 3.93e-21 ACAGGTCATG TCACTTTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTA T chr1:225654693-225655193 - 25 7.63e-21 AAACCAGGAA TTTTATTTATTTATTTATTTATTTATTTATTTATTTATTTTTTAGATGG AGTCTCGCTC chr5:32367215-32367715 - 34 4.48e-18 TCAAGGCTAC AGTGAGTTATTTATTTATTTATTTATTTATTTACTTTATTTATTTATTT ATTTATTATT chr10:72580219-72580719 + 22 3.54e-15 TCATCCAAGC TTTTGCTGatttatttatttatttaattaattaatttatttatttattt attttgagac chr6:133248608-133249108 + 51 1.56e-13 GGCAATTCTA CTGttttattttgtttttttttttgtttgtttgtttttGCATTAACTTT A chr6:56529579-56530079 - 24 6.73e-13 ATGTCATGCT TTAGTTTTATTTATGTTTTCATTTTTATTTGTCCATTCTTTTTGTTTTT CTTCTTTATT chr2:109029732-109030232 + 20 1.66e-12 ACAAGGATCC TGGTTGCTATCTCTGTATTGATGGATTGATTGattcattcattcagtaa gcatttactg chr6:43321903-43322403 - 11 1.99e-12 TTCATCTCAA AGTGTTTTATACCTTCTTTTATGAGTTCTTTGACTCATTGATTGTTTTA GGAACGTATT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WTTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTT MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr3:193970364-193970864 7.5e-27 26_[-1]_25 chr17:40325030-40325530 7.5e-27 21_[-1]_30 chr5:160008637-160009137 1.5e-26 13_[-1]_38 chr5:139489857-139490357 1.5e-26 26_[+1]_25 chr20:41059184-41059684 1.5e-26 24_[-1]_27 chr5:34182251-34182751 3.5e-26 22_[-1]_29 chr19:34234636-34235136 9.2e-26 29_[+1]_22 chr22:18020690-18021190 1.2e-25 26_[-1]_25 chr19:31332880-31333380 2.4e-25 24_[-1]_27 chr16:30570496-30570996 3.4e-25 24_[+1]_27 chr19:32398352-32398852 7.4e-25 26_[-1]_25 chr16:21820748-21821248 5e-24 29_[+1]_22 chr19:35881941-35882441 5.6e-24 22_[-1]_29 chr21:36122964-36123464 6.7e-24 22_[-1]_29 chr5:32157746-32158246 8.5e-24 31_[-1]_20 chr17:35567290-35567790 6.2e-23 26_[-1]_25 chr1:6404513-6405013 3.9e-21 1_[-1]_50 chr1:225654693-225655193 7.6e-21 24_[-1]_27 chr5:32367215-32367715 4.5e-18 33_[-1]_18 chr10:72580219-72580719 3.5e-15 21_[+1]_30 chr6:133248608-133249108 1.6e-13 50_[+1]_1 chr6:56529579-56530079 6.7e-13 23_[-1]_28 chr2:109029732-109030232 1.7e-12 19_[+1]_32 chr6:43321903-43322403 2e-12 10_[-1]_41 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WTTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTT MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF WTTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTT width=49 seqs=24 chr3:193970364-193970864 ( 27) TTTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTT 1 chr17:40325030-40325530 ( 22) TTTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTT 1 chr5:160008637-160009137 ( 14) ATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTT 1 chr5:139489857-139490357 ( 27) ATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTT 1 chr20:41059184-41059684 ( 25) ATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTT 1 chr5:34182251-34182751 ( 23) TTTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTG 1 chr19:34234636-34235136 ( 30) ATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTG 1 chr22:18020690-18021190 ( 27) ATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTA 1 chr19:31332880-31333380 ( 25) ATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTGT 1 chr16:30570496-30570996 ( 25) TATTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTT 1 chr19:32398352-32398852 ( 27) TTTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTGA 1 chr16:21820748-21821248 ( 30) CTTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTTCTTT 1 chr19:35881941-35882441 ( 23) TTTTATTTATTTATTTATTTATTTATTTATTTATTTATTTTTTATTTTT 1 chr21:36122964-36123464 ( 23) TATTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTTTTTG 1 chr5:32157746-32158246 ( 32) TGTATTTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTT 1 chr17:35567290-35567790 ( 27) CTGATTTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTT 1 chr1:6404513-6405013 ( 2) TCACTTTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTA 1 chr1:225654693-225655193 ( 25) TTTTATTTATTTATTTATTTATTTATTTATTTATTTATTTTTTAGATGG 1 chr5:32367215-32367715 ( 34) AGTGAGTTATTTATTTATTTATTTATTTATTTACTTTATTTATTTATTT 1 chr10:72580219-72580719 ( 22) TTTTGCTGATTTATTTATTTATTTAATTAATTAATTTATTTATTTATTT 1 chr6:133248608-133249108 ( 51) CTGTTTTATTTTGTTTTTTTTTTTGTTTGTTTGTTTTTGCATTAACTTT 1 chr6:56529579-56530079 ( 24) TTAGTTTTATTTATGTTTTCATTTTTATTTGTCCATTCTTTTTGTTTTT 1 chr2:109029732-109030232 ( 20) TGGTTGCTATCTCTGTATTGATGGATTGATTGATTCATTCATTCAGTAA 1 chr6:43321903-43322403 ( 11) AGTGTTTTATACCTTCTTTTATGAGTTCTTTGACTCATTGATTGTTTTA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WTTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTT MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 49 n= 31148 bayes= 9.99944 E= 2.1e-248 19 -73 -1123 89 -181 -231 -31 127 -181 -1123 -73 143 -181 -231 -73 135 118 -1123 -231 -1 -1123 -231 -131 158 -1123 -231 -1123 171 -281 -1123 -231 164 171 -1123 -1123 -281 -1123 -1123 -1123 177 -281 -231 -1123 164 -1123 -231 -1123 171 158 -131 -231 -1123 -1123 -1123 -1123 177 -1123 -1123 -131 164 -1123 -231 -1123 171 158 -1123 -1123 -123 -1123 -1123 -1123 177 -1123 -1123 -1123 177 -1123 -231 -231 164 171 -1123 -1123 -281 -1123 -1123 -1123 177 -1123 -1123 -131 164 -281 -1123 -231 164 158 -1123 -131 -281 -281 -1123 -1123 171 -281 -1123 -1123 171 -1123 -231 -231 164 158 -1123 -231 -181 -281 -1123 -1123 171 -1123 -1123 -231 171 -1123 -1123 -131 164 164 -231 -231 -1123 -281 -73 -1123 151 -281 -1123 -1123 171 -1123 -131 -1123 164 151 -1123 -1123 -81 -181 -231 -1123 158 -1123 -1123 -231 171 -1123 -131 -231 158 143 -1123 -1123 -49 -181 -1123 -1123 164 -1123 -1123 -1123 177 -123 -231 -131 135 118 -1123 -231 -1 -123 -131 -231 135 -1123 -1123 -1123 177 -281 -1123 -73 151 -49 -1123 -31 109 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WTTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTT MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 49 nsites= 24 E= 2.1e-248 0.333333 0.125000 0.000000 0.541667 0.083333 0.041667 0.166667 0.708333 0.083333 0.000000 0.125000 0.791667 0.083333 0.041667 0.125000 0.750000 0.666667 0.000000 0.041667 0.291667 0.000000 0.041667 0.083333 0.875000 0.000000 0.041667 0.000000 0.958333 0.041667 0.000000 0.041667 0.916667 0.958333 0.000000 0.000000 0.041667 0.000000 0.000000 0.000000 1.000000 0.041667 0.041667 0.000000 0.916667 0.000000 0.041667 0.000000 0.958333 0.875000 0.083333 0.041667 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.083333 0.916667 0.000000 0.041667 0.000000 0.958333 0.875000 0.000000 0.000000 0.125000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.041667 0.041667 0.916667 0.958333 0.000000 0.000000 0.041667 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.083333 0.916667 0.041667 0.000000 0.041667 0.916667 0.875000 0.000000 0.083333 0.041667 0.041667 0.000000 0.000000 0.958333 0.041667 0.000000 0.000000 0.958333 0.000000 0.041667 0.041667 0.916667 0.875000 0.000000 0.041667 0.083333 0.041667 0.000000 0.000000 0.958333 0.000000 0.000000 0.041667 0.958333 0.000000 0.000000 0.083333 0.916667 0.916667 0.041667 0.041667 0.000000 0.041667 0.125000 0.000000 0.833333 0.041667 0.000000 0.000000 0.958333 0.000000 0.083333 0.000000 0.916667 0.833333 0.000000 0.000000 0.166667 0.083333 0.041667 0.000000 0.875000 0.000000 0.000000 0.041667 0.958333 0.000000 0.083333 0.041667 0.875000 0.791667 0.000000 0.000000 0.208333 0.083333 0.000000 0.000000 0.916667 0.000000 0.000000 0.000000 1.000000 0.125000 0.041667 0.083333 0.750000 0.666667 0.000000 0.041667 0.291667 0.125000 0.083333 0.041667 0.750000 0.000000 0.000000 0.000000 1.000000 0.041667 0.000000 0.125000 0.833333 0.208333 0.000000 0.166667 0.625000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WTTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTT MEME-1 regular expression -------------------------------------------------------------------------------- [TA]TTT[AT]TTTATTTATTTATTTATTTATTTATTTATTTATTT[AT]TTT[AT]TTT[TA] -------------------------------------------------------------------------------- Time 354.32 secs. ******************************************************************************** ******************************************************************************** MOTIF TGTTTAYTTTKB MEME-2 width = 12 sites = 159 llr = 1356 E-value = 3.2e-046 ******************************************************************************** -------------------------------------------------------------------------------- Motif TGTTTAYTTTKB MEME-2 Description -------------------------------------------------------------------------------- Simplified A :::::5:2:321 pos.-specific C ::::::512:13 probability G :a::13:1::52 matrix T a:aa92568723 bits 2.3 2.0 * 1.8 **** 1.6 **** Relative 1.4 **** Entropy 1.1 ***** (12.3 bits) 0.9 ***** * ** 0.7 ***** * ** 0.5 ******* ** 0.2 ************ 0.0 ------------ Multilevel TGTTTATTTTGC consensus GCACATT sequence T G -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGTTTAYTTTKB MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ------------ chr6:8939605-8940105 + 14 5.52e-07 GGGTGACTGA TGTTTACTTTGT TGATGGCCCC chr4:19823713-19824213 + 35 6.93e-07 ttataaaaca tgtttattttgg gaaaggacat chr2:100005014-100005514 - 69 6.93e-07 TTTACATGTT TGTTTATTTTGG AATTCAGTGA chr3:16482918-16483418 - 70 1.06e-06 TACTCTGAAG TGTTTGTTTTGC CTTTCCTTAA chr17:61335987-61336487 + 33 1.06e-06 GTTATTTGGC TGTTTGCTTTGG CAGCTCTTGA chr14:51581284-51581784 - 69 1.06e-06 CTCCACCATG TGTTTGTTTTGC TTTAAGTCTT chr5:136420522-136421022 + 30 1.06e-06 AGAAAGAGAG TGTTTGCTTTGG CTCAGGGCTG chr1:169942305-169942805 - 2 1.46e-06 AGTTTAATCT TGTTTTCTTTGC A chr10:10989646-10990146 - 57 1.46e-06 GTTACTTCAC TGTTTTCTTTGC ATGTCTCTGA chr10:121831742-12183224 - 36 2.40e-06 CTGTAATTTC TGTTTACTTAGG GATAAAGCTG chr10:12720331-12720831 - 56 3.40e-06 AATGAGTCTC TGTTTGCTTAGC TAAGATTAGA chr3:156161124-156161624 + 29 3.40e-06 CTTTACCACA TGTTTATTTTTC TTGTTTCACA chr6:129183828-129184328 + 66 3.40e-06 TTTTTGTTGT TGTTTATATTGC TTTTCCCAAG chr1:231037946-231038446 + 69 3.40e-06 CAAAGATGGC TGTTTATTTTTC TTGTGCTTCA chr16:15590842-15591342 - 53 4.51e-06 CTGTTTCAAG TGTTTATTCTGC CTCCGCTTGC chr8:71355233-71355733 + 44 4.51e-06 CTGATGCATG TGTTTACTCTGG CAAACTACTT chr17:48492589-48493089 + 20 4.51e-06 GCGGATTCAG TGTTTATTTAGG CTGAGAGCTG chr10:99519974-99520474 + 64 4.51e-06 AGGATAATGG TGTTTACTTTAC CGCGATAAAG chr1:229221437-229221937 - 7 5.98e-06 GGTTTTGCAG TGTTTACTTTCC AGTGAT chr5:88516295-88516795 - 68 5.98e-06 AAATTACAAG TGTTTACTCTGT ATCCATGAGT chr5:175385676-175386176 - 24 5.98e-06 AATGCACCAC TGTTTGTTTAGC CATTCACCTA chr1:175841774-175842274 + 27 5.98e-06 ACCATGGAGG TGTTTGCTCTGC TCTTAATGAG chr2:12303218-12303718 - 64 7.56e-06 ACCCTGGGAT TGTTTGCTTTTG TCTAGTAAAA chr10:72800366-72800866 - 83 7.56e-06 ACAGGA TGTTTGCTTTTG TTATCAGTGA chr4:119730134-119730634 - 10 7.56e-06 ACATTGTTTA TGTTTGCTTTTG CCTGACTAA chr11:20070419-20070919 + 34 7.56e-06 AACCAAGCTG TGTTTGTTTTTC TAGGGCAAAC chr1:24043447-24043947 + 57 7.56e-06 TGTGCtttct tgtttatttttt tttgagacag chr11:88320062-88320562 - 58 9.10e-06 AGTAAATTGC TGTTTTCTTAGC TAATTCTGGA chr10:126233697-12623419 - 85 9.10e-06 TGCC TGTTTATTTTCC CATCATACAC chr12:806375-806875 + 28 9.10e-06 CATCAGGCAA TGTTTATTTTGA TATGACGTAG chr7:2157574-2158074 + 27 9.10e-06 GCAGGAAGAG TGTTTATTTTCC AGAAGCCTCC chr5:127934854-127935354 + 68 9.10e-06 CCAGCTGAGG TGTTTGTTTAGG CTAATCCCAA chr1:212596155-212596655 + 35 9.10e-06 GTTTTCCAAT TGTTTACTTTAT AACAATAATA chr6:4320850-4321350 + 19 1.08e-05 TGTTTCTTAC TGTTTACATAGC AATGAAGATT chr6:11270217-11270717 - 62 1.08e-05 AGTGTCTGCT TGTTTATTTTAG GTAGATAAGT chr1:107767195-107767695 - 8 1.08e-05 CACATCTTCA TGTTTACTTTCT ACACCAC chr12:71626706-71627206 - 65 1.08e-05 TAAGTTACAG TGTTTTCTTTTC TGACTCATTT chr5:99900439-99900939 + 58 1.08e-05 atttgtgaat tgttttcttttc tactccataa chr1:159916142-159916642 + 18 1.25e-05 gcgaattcaa tgttttctctgc aatgacatca chr10:88181894-88182394 + 2 1.25e-05 A TGTTTATTTTAT GGGGCTCTCT chr5:90547962-90548462 + 53 1.25e-05 ATGAAGGATT TGTTTGCCTTGT CTCCTCCCAA chr5:119270066-119270566 - 34 1.51e-05 TGGAGTCATA TGTTTACACTGC AAAGTATAAT chr2:188573438-188573938 + 12 1.51e-05 GGGTTTTATG TGTTTGTTTTGA GCTCAGAGGA chr10:26524157-26524657 - 47 1.51e-05 AATTTGTTGT TGTTTTTTTTTC ATCATCAATC chr4:38150223-38150723 - 14 1.51e-05 AATTATGAAA TGTTTATTTTCT TAGATCAGCT chr1:3403704-3404204 + 89 1.75e-05 AGAGGGTCCG TGTTTTCTTTAC chr10:112793304-11279380 + 65 1.75e-05 CTCTTTTGTT TGTTTGTCTTGT GGAACATGTA chr10:75593192-75593692 + 77 1.75e-05 GAAATGTTGC TGTTTATTCAGC AATGCAATAA chr15:81950773-81951273 + 20 1.75e-05 ctggagcctc tgtttgcttatc tataaaacga chr2:109261151-109261651 + 29 1.75e-05 AAATTGTGTT TGTTTTCATTGT AATTACAGCA chr1:16120929-16121429 - 7 1.75e-05 ACTTAGCCTG TGTTTACTTATT TCATTC chr3:44995225-44995725 - 6 1.75e-05 ACACTCAAAA TGTTTACCTTTC CCTGA chr15:69143642-69144142 + 42 2.10e-05 ctgtgatagg tgtttgttttat aggcttgatc chr6:52243258-52243758 - 11 2.10e-05 AATCACCCAG TGTTGACTTTGG ACAGCTCCTA chr6:125050688-125051188 - 51 2.10e-05 ACACACACTT TGTTTACACTGG CGTCTATCAA chr9:95721050-95721550 - 7 2.10e-05 ATAAACCCTT TGTTTATGTTGC TGGTGA chr5:54302197-54302697 - 58 2.10e-05 CAGTGCTGAG TGTTTTCCTTGG ATCACCTAAT chr1:208747842-208748342 + 28 2.10e-05 TTAGACCGTT TGTTTTCTTTCC CTCAAATCAA chr15:77067292-77067792 - 74 2.10e-05 GCTTATCAAA TGTTTACCTAGG TTCCCTTGGG chr3:9194424-9194924 - 71 2.10e-05 TGGGTTCTAG TGTTGACTTTGG CACTATCTTG chr6:13006937-13007437 - 70 2.10e-05 CTATTAAGTG TGTTTACATTAC AATAAAATAA chr15:69591895-69592395 - 22 2.10e-05 CTTAATGGTT TGTTTGCTCAGC CTACTTCAAA chr10:50463970-50464470 - 12 2.52e-05 ATCTCTTGTT TGTTTTTATTGT GGTAAAAAAC chr6:167829440-167829940 + 38 2.52e-05 TTTCTTTTGT TGTTTTTTTTTT GGGTACAGTG chr3:71102096-71102596 - 18 2.52e-05 TTATTAAGTT TGTTTTCCTTGT CATATTGTAA chr10:12445537-12446037 + 18 2.52e-05 ATTGCTCATT TGTTTTTATTGT TAGTATAACT chr1:228902969-228903469 + 26 2.52e-05 ACCACTCCAC TGTTTATATTTG GTCATTTATT chr10:7433224-7433724 - 29 2.94e-05 AGGAATGGCT TGTTTACTTAAT CTCTCTTTTA chr6:128066839-128067339 + 87 2.94e-05 ACACGCATTC TGTTTATCCTGC AG chr14:91149463-91149963 - 14 2.94e-05 AGAGCACACG TGTTTGCTTATT TAGTACAGAG chr1:3419785-3420285 + 40 2.94e-05 ATGAGCTGTG TGTTTTTTCTGT AATGAGAGCC chr9:86731438-86731938 + 20 2.94e-05 ATTTCAACAT TGTTTATGTTGG GCTGAATTTA chr18:50629032-50629532 - 84 3.42e-05 ACTGT TGTTTGCTCAGT CTGGCTATAA chr8:108689368-108689868 + 86 3.42e-05 ACTGGAATGA TGTTGGCTTTGG ATT chr1:198837492-198837992 + 14 3.42e-05 TGTTCCTTCT TGTTTTTCTTGT CATAAAGAGT chr10:35890236-35890736 - 77 3.42e-05 TACTTTATAT TGTTTGTTCTTC ACTGAAGTTG chr17:71163452-71163952 - 9 3.42e-05 CACACGTTTA TGTTGATTTTGT GGTTTCTG chr1:38724121-38724621 - 44 3.42e-05 GCAATAAAGC TGTTTGCCTAGG AAGCTTCCTG chr20:46085114-46085614 + 23 3.86e-05 Tggagttcac tgtttatttaat aaaggagagg chr10:20958712-20959212 - 34 3.86e-05 GCTCTTCTCA TGTTTGTTTATT GAGGATTTGA chrX:136046983-136047483 - 56 3.86e-05 GTTAGGTTTC TGTTTGTTTATT TGAAAACATT chr8:71711444-71711944 - 4 4.34e-05 GTAGAACCAG TGTTTTCACTGC AAT chr5:38782988-38783488 - 53 4.34e-05 TTAAGAGAAC TGTTTGTGTTGG CAGTGCTTCA chr13:46674981-46675481 - 53 4.83e-05 TCTAACAGTG TGTTTGTTTTTA CAGCTGCCTG chr13:113493289-11349378 + 40 4.83e-05 ATTGCCTCAT TGTTTGTTTTTA AGGTGGTAAA chr1:229218491-229218991 + 15 4.83e-05 ctgtatagct tgttttcctttc caatttaaaa chr6:684067-684567 - 35 4.83e-05 ATGACCAGCT TGTTTTCTCAGG GAGGTTTATG chr17:43670017-43670517 + 36 5.37e-05 TTTCCCTCCC TGTTTACCCAGC AGTATTTTTT chr12:107380062-10738056 + 71 5.37e-05 TTTGTTTCTT TGTTTGCATTCT TTTCCTTCCA chrX:23944266-23944766 + 87 6.02e-05 TACTGATGTT TGTTTATACTTC AT chr7:42152439-42152939 - 87 6.02e-05 GC TGTTGACCTTGC TTGGGGACCA chr12:66751643-66752143 - 88 6.02e-05 T TGTTTTTATTTG AAATTGCAGC chr8:25998475-25998975 + 42 6.73e-05 CAGATAATGA TGTTTAATTTGT TATTGGCTGT chr14:36955972-36956472 + 16 6.73e-05 TGCATTTATG TGTTTTCTCTCC CCGAATACTG chr7:33669144-33669644 - 58 7.52e-05 GTGATAAATT TGTTGATCTTGC TCTAAAGGCT chr4:111883490-111883990 + 77 7.52e-05 GGTAAGACTC TGTTTGTTTTCA GTAGGGCTAA chr16:12120436-12120936 + 36 7.52e-05 TGTGTGTCTG TGTTTATGTTTG GGTCCCTGGG chr11:92868163-92868663 + 31 7.52e-05 ATCTATTTGC TGTTTTTACTGT CTCAGCAGTG chr12:51405731-51406231 - 87 7.52e-05 TG TGTTTGTCTTAT ATATCTCCAG chr12:54052075-54052575 - 78 8.31e-05 TAAAGTTAAC TGTTTATGTTTT ATTTATTAGA chr3:169526186-169526686 + 81 8.31e-05 ATAAACCACA TGTTTACTTAAA GAAGCCTG chr1:58779925-58780425 - 21 8.31e-05 GAGTCAGGGC TGTTTGCTCATT AGCAGTGTTC chr19:40920945-40921445 - 39 9.10e-05 AGTGACTCAG TGTTTACCCTGA GCCCAGAAGT chr5:74632108-74632608 + 48 9.10e-05 TCAGAGCATT TGTTTATTCAAG ATTACTGAGA chr1:59214665-59215165 - 9 9.10e-05 CATTTCTGTG TGTTTGTATAAC ATGAACTG chr1:201721118-201721618 - 70 9.10e-05 GAGGAGTGAC TGTTTACATTAA ATTACTGGGG chr6:1667161-1667661 - 85 9.10e-05 ATGG TGTTTATACTGA GCTTAAATTG chr22:24727032-24727532 + 46 9.10e-05 tatatggcTC TGTTGACTTTAT GATAAAAGTT chr7:22548262-22548762 + 33 9.10e-05 ttgaaaactg tgtttgcataag agatttaatg chr11:66789312-66789812 - 27 9.10e-05 TGCTCCAGAT TGTTTACCCTCC ATTCTCCTAA chr3:188272547-188273047 - 53 9.10e-05 AAATTATTAC TGTTTATATAAT GGTCTTTCCT chr3:172140650-172141150 + 3 9.10e-05 ta tgtttattctta tatttacatA chr8:109611165-109611665 - 72 9.89e-05 GTGGACTTAG TGTTTATCTTTA TGGCAGGGTT chr18:23684577-23685077 - 43 9.89e-05 ATTGACTTCA TGTTGTCATTGC AGTTTAAAAA chr10:126249961-12625046 - 28 9.89e-05 CTTGAGTCCC TGTTTATATACT CTGGGATTAT chr1:220918448-220918948 - 11 9.89e-05 CAAGGTAACA TGTTTATATACT CCATTGGATG chr13:37046921-37047421 - 47 1.07e-04 AGCAGTAACC TGTTTTCTCATG ATGATTTAAA chr12:106074939-10607543 + 1 1.07e-04 . TGTTTATGTTAT GGCCCACTCC chr19:28520336-28520836 - 1 1.15e-04 ATGACTTGTG TGTTGATTTATC chr11:115452199-11545269 + 62 1.15e-04 TTAAGTGAAT TGTTGACATAGG CATTAAAAGT chr4:110904623-110905123 + 26 1.24e-04 AGTTGTCCTT TGTTGGTTTTAG GAACAATCAA chr7:83267138-83267638 + 8 1.24e-04 TTTACAA TGTTTTATTTGT TAAACATTTT chr10:121819030-12181953 - 35 1.24e-04 TTCTTAAAGC TGTTTTCATTTA GAGTAAAAGG chr13:99677542-99678042 + 42 1.24e-04 TAATGGCTAC TGTTTTATTTGT ACATAAAAAG chr14:99821632-99822132 + 84 1.34e-04 ATAGCTAGAG TGTTTGTTCACT CCCTA chr20:5582150-5582650 - 67 1.34e-04 TAGGTATATA TGTTTATGTATG GTAGAAATGA chr21:33136827-33137327 - 80 1.45e-04 CGTTAAACA TGTTTTCTTAAA CAGTGACTGA chr3:61634650-61635150 + 55 1.45e-04 GATTTCAAGC TGTTGATATAGT TCAGACCTTG chr20:45017806-45018306 - 69 1.45e-04 TTTTGGGTTT TGTTTTTGTTAC CAGGCACCTA chr13:87123853-87124353 + 32 1.56e-04 tgagagctga tgtttttatacg gtgtcaggtc chr3:171801819-171802319 - 73 1.56e-04 GGGATTCATT TGTTTTCCTAAT TGTTCTTTTC chr17:68381072-68381572 + 29 1.56e-04 ATCATGGTTT TGTTGATATTTT GGTTGCTGTG chr4:8044644-8045144 - 30 1.56e-04 ACACAGCTGT TGTTTATAGTGG TGCAGACACG chr2:48732937-48733437 + 71 1.56e-04 TTTTGGAGAG TGTTTACATAAA AGCTTCAGCA chr10:33271916-33272416 + 25 1.56e-04 GCATGACTTA TGTTTACATAAA GTCTCAGGAG chr1:85297832-85298332 + 59 1.56e-04 CGAAACTGTG TGTTGACTTAAT GGTATGACTC chr1:68217000-68217500 - 1 1.67e-04 GAAAAGGGTT TGTTTATAGTGT chr13:106096584-10609708 + 23 1.67e-04 TGGTGACACA TATTTACTTTGT GGTCAGATGT chr14:68140202-68140702 - 62 1.67e-04 TAACATTTAC TGTTTACTGTAG CTGTGGTTGT chr10:44752840-44753340 + 34 1.79e-04 TTTTAATAGT TGTTTATACAAT CTGCCCAGCC chr1:233241765-233242265 - 8 1.79e-04 AAAGCCACAA TGTTTAATTATC TACCTGG chr15:70507800-70508300 + 34 1.79e-04 tagggtgtct tgtttactcaca gtggccttag chr8:17540093-17540593 + 56 1.79e-04 TTCTGACGTA TGTTTTTCTAAT TACTCAAAAG chr6:16754787-16755287 + 56 1.79e-04 GTTGGGAGAG TGTTTGCCTATA TGACAATGTG chr6:43321903-43322403 - 66 1.90e-04 GTTGTGGTTT TGTTTTTATTCA TCTCAAAGTG chr6:54879150-54879650 - 2 1.90e-04 GATAATCTCC TGTTTTATTAGG T chr1:234700146-234700646 + 78 1.90e-04 TATTTATTAC TGTTATTTTTGC CCTCCCTCAC chr1:168801355-168801855 + 63 2.01e-04 tatgaAGCAA TGTTTATTGTAT TTAACATTTT chr8:71496063-71496563 - 18 2.01e-04 ATGACAATGG TGTTAGCTTAGC TGTACAGGCT chr2:175805423-175805923 - 12 2.01e-04 TGCATTAAAT TGTTTAATCTTC AGAACAACCC chr4:20272369-20272869 + 61 2.28e-04 TGGTTATAAA TATTTGTTTTGT GGTTTTCGGT chr1:145740173-145740673 + 58 2.42e-04 CTAAAGAGTT TATTTACTCTGC TTATCTCGAG chr3:77191644-77192144 - 62 2.59e-04 TTATTTATAA TGTTTATCGTTC TCTCGCCAGT chr5:72246989-72247489 - 26 2.75e-04 CCGTAAGCTG TGTTTTTATAAA CAGTATAATG chr6:91299548-91300048 - 61 2.91e-04 GTGGCTATTA TATTTATATTGG TTTAAACTGT chr11:92331201-92331701 + 89 2.91e-04 AGGTGTGGAG TGTTATTTTAGC chr18:42850138-42850638 + 34 3.09e-04 TGCTTGAACA TGTTTATGCACG GTTAATGGAT chr5:69517658-69518158 + 80 3.44e-04 TTTCTGGGTG TGTTAGTTTTCG TTGGCAGTT chr4:74202024-74202524 - 62 5.05e-04 CTAACTAGCT TGTTTACTCGTG TGGTCCTAAG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGTTTAYTTTKB MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr6:8939605-8940105 5.5e-07 13_[+2]_75 chr4:19823713-19824213 6.9e-07 34_[+2]_54 chr2:100005014-100005514 6.9e-07 68_[-2]_20 chr3:16482918-16483418 1.1e-06 69_[-2]_19 chr17:61335987-61336487 1.1e-06 32_[+2]_56 chr14:51581284-51581784 1.1e-06 68_[-2]_20 chr5:136420522-136421022 1.1e-06 29_[+2]_59 chr1:169942305-169942805 1.5e-06 1_[-2]_87 chr10:10989646-10990146 1.5e-06 56_[-2]_32 chr10:121831742-12183224 2.4e-06 35_[-2]_53 chr10:12720331-12720831 3.4e-06 55_[-2]_33 chr3:156161124-156161624 3.4e-06 28_[+2]_60 chr6:129183828-129184328 3.4e-06 65_[+2]_23 chr1:231037946-231038446 3.4e-06 68_[+2]_20 chr16:15590842-15591342 4.5e-06 52_[-2]_36 chr8:71355233-71355733 4.5e-06 43_[+2]_45 chr17:48492589-48493089 4.5e-06 19_[+2]_69 chr10:99519974-99520474 4.5e-06 63_[+2]_25 chr1:229221437-229221937 6e-06 6_[-2]_82 chr5:88516295-88516795 6e-06 67_[-2]_21 chr5:175385676-175386176 6e-06 23_[-2]_65 chr1:175841774-175842274 6e-06 26_[+2]_62 chr2:12303218-12303718 7.6e-06 63_[-2]_25 chr10:72800366-72800866 7.6e-06 82_[-2]_6 chr4:119730134-119730634 7.6e-06 9_[-2]_79 chr11:20070419-20070919 7.6e-06 33_[+2]_55 chr1:24043447-24043947 7.6e-06 56_[+2]_32 chr11:88320062-88320562 9.1e-06 57_[-2]_31 chr10:126233697-12623419 9.1e-06 84_[-2]_4 chr12:806375-806875 9.1e-06 27_[+2]_61 chr7:2157574-2158074 9.1e-06 26_[+2]_62 chr5:127934854-127935354 9.1e-06 67_[+2]_21 chr1:212596155-212596655 9.1e-06 34_[+2]_54 chr6:4320850-4321350 1.1e-05 18_[+2]_70 chr6:11270217-11270717 1.1e-05 61_[-2]_27 chr1:107767195-107767695 1.1e-05 7_[-2]_81 chr12:71626706-71627206 1.1e-05 64_[-2]_24 chr5:99900439-99900939 1.1e-05 57_[+2]_31 chr1:159916142-159916642 1.2e-05 17_[+2]_71 chr10:88181894-88182394 1.2e-05 1_[+2]_87 chr5:90547962-90548462 1.2e-05 52_[+2]_36 chr5:119270066-119270566 1.5e-05 33_[-2]_55 chr2:188573438-188573938 1.5e-05 11_[+2]_77 chr10:26524157-26524657 1.5e-05 46_[-2]_42 chr4:38150223-38150723 1.5e-05 13_[-2]_75 chr1:3403704-3404204 1.7e-05 88_[+2] chr10:112793304-11279380 1.7e-05 64_[+2]_24 chr10:75593192-75593692 1.7e-05 76_[+2]_12 chr15:81950773-81951273 1.7e-05 19_[+2]_69 chr2:109261151-109261651 1.7e-05 28_[+2]_60 chr1:16120929-16121429 1.7e-05 6_[-2]_82 chr3:44995225-44995725 1.7e-05 5_[-2]_83 chr15:69143642-69144142 2.1e-05 41_[+2]_47 chr6:52243258-52243758 2.1e-05 10_[-2]_78 chr6:125050688-125051188 2.1e-05 50_[-2]_38 chr9:95721050-95721550 2.1e-05 6_[-2]_82 chr5:54302197-54302697 2.1e-05 57_[-2]_31 chr1:208747842-208748342 2.1e-05 27_[+2]_61 chr15:77067292-77067792 2.1e-05 73_[-2]_15 chr3:9194424-9194924 2.1e-05 70_[-2]_18 chr6:13006937-13007437 2.1e-05 69_[-2]_19 chr15:69591895-69592395 2.1e-05 21_[-2]_67 chr10:50463970-50464470 2.5e-05 11_[-2]_77 chr6:167829440-167829940 2.5e-05 37_[+2]_51 chr3:71102096-71102596 2.5e-05 17_[-2]_71 chr10:12445537-12446037 2.5e-05 17_[+2]_71 chr1:228902969-228903469 2.5e-05 25_[+2]_63 chr10:7433224-7433724 2.9e-05 28_[-2]_60 chr6:128066839-128067339 2.9e-05 86_[+2]_2 chr14:91149463-91149963 2.9e-05 13_[-2]_75 chr1:3419785-3420285 2.9e-05 39_[+2]_49 chr9:86731438-86731938 2.9e-05 19_[+2]_69 chr18:50629032-50629532 3.4e-05 83_[-2]_5 chr8:108689368-108689868 3.4e-05 85_[+2]_3 chr1:198837492-198837992 3.4e-05 13_[+2]_75 chr10:35890236-35890736 3.4e-05 76_[-2]_12 chr17:71163452-71163952 3.4e-05 8_[-2]_80 chr1:38724121-38724621 3.4e-05 43_[-2]_45 chr20:46085114-46085614 3.9e-05 22_[+2]_66 chr10:20958712-20959212 3.9e-05 33_[-2]_55 chrX:136046983-136047483 3.9e-05 55_[-2]_33 chr8:71711444-71711944 4.3e-05 3_[-2]_85 chr5:38782988-38783488 4.3e-05 52_[-2]_36 chr13:46674981-46675481 4.8e-05 52_[-2]_36 chr13:113493289-11349378 4.8e-05 39_[+2]_49 chr1:229218491-229218991 4.8e-05 14_[+2]_74 chr6:684067-684567 4.8e-05 34_[-2]_54 chr17:43670017-43670517 5.4e-05 35_[+2]_53 chr12:107380062-10738056 5.4e-05 70_[+2]_18 chrX:23944266-23944766 6e-05 86_[+2]_2 chr7:42152439-42152939 6e-05 86_[-2]_2 chr12:66751643-66752143 6e-05 87_[-2]_1 chr8:25998475-25998975 6.7e-05 41_[+2]_47 chr14:36955972-36956472 6.7e-05 15_[+2]_73 chr7:33669144-33669644 7.5e-05 57_[-2]_31 chr4:111883490-111883990 7.5e-05 76_[+2]_12 chr16:12120436-12120936 7.5e-05 35_[+2]_53 chr11:92868163-92868663 7.5e-05 30_[+2]_58 chr12:51405731-51406231 7.5e-05 86_[-2]_2 chr12:54052075-54052575 8.3e-05 77_[-2]_11 chr3:169526186-169526686 8.3e-05 80_[+2]_8 chr1:58779925-58780425 8.3e-05 20_[-2]_68 chr19:40920945-40921445 9.1e-05 38_[-2]_50 chr5:74632108-74632608 9.1e-05 47_[+2]_41 chr1:59214665-59215165 9.1e-05 8_[-2]_80 chr1:201721118-201721618 9.1e-05 69_[-2]_19 chr6:1667161-1667661 9.1e-05 84_[-2]_4 chr22:24727032-24727532 9.1e-05 45_[+2]_43 chr7:22548262-22548762 9.1e-05 32_[+2]_56 chr11:66789312-66789812 9.1e-05 26_[-2]_62 chr3:188272547-188273047 9.1e-05 52_[-2]_36 chr3:172140650-172141150 9.1e-05 2_[+2]_86 chr8:109611165-109611665 9.9e-05 71_[-2]_17 chr18:23684577-23685077 9.9e-05 42_[-2]_46 chr10:126249961-12625046 9.9e-05 27_[-2]_61 chr1:220918448-220918948 9.9e-05 10_[-2]_78 chr13:37046921-37047421 0.00011 46_[-2]_42 chr12:106074939-10607543 0.00011 [+2]_88 chr19:28520336-28520836 0.00012 [-2]_88 chr11:115452199-11545269 0.00012 61_[+2]_27 chr4:110904623-110905123 0.00012 25_[+2]_63 chr7:83267138-83267638 0.00012 7_[+2]_81 chr10:121819030-12181953 0.00012 34_[-2]_54 chr13:99677542-99678042 0.00012 41_[+2]_47 chr14:99821632-99822132 0.00013 83_[+2]_5 chr20:5582150-5582650 0.00013 66_[-2]_22 chr21:33136827-33137327 0.00015 79_[-2]_9 chr3:61634650-61635150 0.00015 54_[+2]_34 chr20:45017806-45018306 0.00015 68_[-2]_20 chr13:87123853-87124353 0.00016 31_[+2]_57 chr3:171801819-171802319 0.00016 72_[-2]_16 chr17:68381072-68381572 0.00016 28_[+2]_60 chr4:8044644-8045144 0.00016 29_[-2]_59 chr2:48732937-48733437 0.00016 70_[+2]_18 chr10:33271916-33272416 0.00016 24_[+2]_64 chr1:85297832-85298332 0.00016 58_[+2]_30 chr1:68217000-68217500 0.00017 [-2]_88 chr13:106096584-10609708 0.00017 22_[+2]_66 chr14:68140202-68140702 0.00017 61_[-2]_27 chr10:44752840-44753340 0.00018 33_[+2]_55 chr1:233241765-233242265 0.00018 7_[-2]_81 chr15:70507800-70508300 0.00018 33_[+2]_55 chr8:17540093-17540593 0.00018 55_[+2]_33 chr6:16754787-16755287 0.00018 55_[+2]_33 chr6:43321903-43322403 0.00019 65_[-2]_23 chr6:54879150-54879650 0.00019 1_[-2]_87 chr1:234700146-234700646 0.00019 77_[+2]_11 chr1:168801355-168801855 0.0002 62_[+2]_26 chr8:71496063-71496563 0.0002 17_[-2]_71 chr2:175805423-175805923 0.0002 11_[-2]_77 chr4:20272369-20272869 0.00023 60_[+2]_28 chr1:145740173-145740673 0.00024 57_[+2]_31 chr3:77191644-77192144 0.00026 61_[-2]_27 chr5:72246989-72247489 0.00027 25_[-2]_63 chr6:91299548-91300048 0.00029 60_[-2]_28 chr11:92331201-92331701 0.00029 88_[+2] chr18:42850138-42850638 0.00031 33_[+2]_55 chr5:69517658-69518158 0.00034 79_[+2]_9 chr4:74202024-74202524 0.0005 61_[-2]_27 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGTTTAYTTTKB MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TGTTTAYTTTKB width=12 seqs=159 chr6:8939605-8940105 ( 14) TGTTTACTTTGT 1 chr4:19823713-19824213 ( 35) TGTTTATTTTGG 1 chr2:100005014-100005514 ( 69) TGTTTATTTTGG 1 chr3:16482918-16483418 ( 70) TGTTTGTTTTGC 1 chr17:61335987-61336487 ( 33) TGTTTGCTTTGG 1 chr14:51581284-51581784 ( 69) TGTTTGTTTTGC 1 chr5:136420522-136421022 ( 30) TGTTTGCTTTGG 1 chr1:169942305-169942805 ( 2) TGTTTTCTTTGC 1 chr10:10989646-10990146 ( 57) TGTTTTCTTTGC 1 chr10:121831742-12183224 ( 36) TGTTTACTTAGG 1 chr10:12720331-12720831 ( 56) TGTTTGCTTAGC 1 chr3:156161124-156161624 ( 29) TGTTTATTTTTC 1 chr6:129183828-129184328 ( 66) TGTTTATATTGC 1 chr1:231037946-231038446 ( 69) TGTTTATTTTTC 1 chr16:15590842-15591342 ( 53) TGTTTATTCTGC 1 chr8:71355233-71355733 ( 44) TGTTTACTCTGG 1 chr17:48492589-48493089 ( 20) TGTTTATTTAGG 1 chr10:99519974-99520474 ( 64) TGTTTACTTTAC 1 chr1:229221437-229221937 ( 7) TGTTTACTTTCC 1 chr5:88516295-88516795 ( 68) TGTTTACTCTGT 1 chr5:175385676-175386176 ( 24) TGTTTGTTTAGC 1 chr1:175841774-175842274 ( 27) TGTTTGCTCTGC 1 chr2:12303218-12303718 ( 64) TGTTTGCTTTTG 1 chr10:72800366-72800866 ( 83) TGTTTGCTTTTG 1 chr4:119730134-119730634 ( 10) TGTTTGCTTTTG 1 chr11:20070419-20070919 ( 34) TGTTTGTTTTTC 1 chr1:24043447-24043947 ( 57) TGTTTATTTTTT 1 chr11:88320062-88320562 ( 58) TGTTTTCTTAGC 1 chr10:126233697-12623419 ( 85) TGTTTATTTTCC 1 chr12:806375-806875 ( 28) TGTTTATTTTGA 1 chr7:2157574-2158074 ( 27) TGTTTATTTTCC 1 chr5:127934854-127935354 ( 68) TGTTTGTTTAGG 1 chr1:212596155-212596655 ( 35) TGTTTACTTTAT 1 chr6:4320850-4321350 ( 19) TGTTTACATAGC 1 chr6:11270217-11270717 ( 62) TGTTTATTTTAG 1 chr1:107767195-107767695 ( 8) TGTTTACTTTCT 1 chr12:71626706-71627206 ( 65) TGTTTTCTTTTC 1 chr5:99900439-99900939 ( 58) TGTTTTCTTTTC 1 chr1:159916142-159916642 ( 18) TGTTTTCTCTGC 1 chr10:88181894-88182394 ( 2) TGTTTATTTTAT 1 chr5:90547962-90548462 ( 53) TGTTTGCCTTGT 1 chr5:119270066-119270566 ( 34) TGTTTACACTGC 1 chr2:188573438-188573938 ( 12) TGTTTGTTTTGA 1 chr10:26524157-26524657 ( 47) TGTTTTTTTTTC 1 chr4:38150223-38150723 ( 14) TGTTTATTTTCT 1 chr1:3403704-3404204 ( 89) TGTTTTCTTTAC 1 chr10:112793304-11279380 ( 65) TGTTTGTCTTGT 1 chr10:75593192-75593692 ( 77) TGTTTATTCAGC 1 chr15:81950773-81951273 ( 20) TGTTTGCTTATC 1 chr2:109261151-109261651 ( 29) TGTTTTCATTGT 1 chr1:16120929-16121429 ( 7) TGTTTACTTATT 1 chr3:44995225-44995725 ( 6) TGTTTACCTTTC 1 chr15:69143642-69144142 ( 42) TGTTTGTTTTAT 1 chr6:52243258-52243758 ( 11) TGTTGACTTTGG 1 chr6:125050688-125051188 ( 51) TGTTTACACTGG 1 chr9:95721050-95721550 ( 7) TGTTTATGTTGC 1 chr5:54302197-54302697 ( 58) TGTTTTCCTTGG 1 chr1:208747842-208748342 ( 28) TGTTTTCTTTCC 1 chr15:77067292-77067792 ( 74) TGTTTACCTAGG 1 chr3:9194424-9194924 ( 71) TGTTGACTTTGG 1 chr6:13006937-13007437 ( 70) TGTTTACATTAC 1 chr15:69591895-69592395 ( 22) TGTTTGCTCAGC 1 chr10:50463970-50464470 ( 12) TGTTTTTATTGT 1 chr6:167829440-167829940 ( 38) TGTTTTTTTTTT 1 chr3:71102096-71102596 ( 18) TGTTTTCCTTGT 1 chr10:12445537-12446037 ( 18) TGTTTTTATTGT 1 chr1:228902969-228903469 ( 26) TGTTTATATTTG 1 chr10:7433224-7433724 ( 29) TGTTTACTTAAT 1 chr6:128066839-128067339 ( 87) TGTTTATCCTGC 1 chr14:91149463-91149963 ( 14) TGTTTGCTTATT 1 chr1:3419785-3420285 ( 40) TGTTTTTTCTGT 1 chr9:86731438-86731938 ( 20) TGTTTATGTTGG 1 chr18:50629032-50629532 ( 84) TGTTTGCTCAGT 1 chr8:108689368-108689868 ( 86) TGTTGGCTTTGG 1 chr1:198837492-198837992 ( 14) TGTTTTTCTTGT 1 chr10:35890236-35890736 ( 77) TGTTTGTTCTTC 1 chr17:71163452-71163952 ( 9) TGTTGATTTTGT 1 chr1:38724121-38724621 ( 44) TGTTTGCCTAGG 1 chr20:46085114-46085614 ( 23) TGTTTATTTAAT 1 chr10:20958712-20959212 ( 34) TGTTTGTTTATT 1 chrX:136046983-136047483 ( 56) TGTTTGTTTATT 1 chr8:71711444-71711944 ( 4) TGTTTTCACTGC 1 chr5:38782988-38783488 ( 53) TGTTTGTGTTGG 1 chr13:46674981-46675481 ( 53) TGTTTGTTTTTA 1 chr13:113493289-11349378 ( 40) TGTTTGTTTTTA 1 chr1:229218491-229218991 ( 15) TGTTTTCCTTTC 1 chr6:684067-684567 ( 35) TGTTTTCTCAGG 1 chr17:43670017-43670517 ( 36) TGTTTACCCAGC 1 chr12:107380062-10738056 ( 71) TGTTTGCATTCT 1 chrX:23944266-23944766 ( 87) TGTTTATACTTC 1 chr7:42152439-42152939 ( 87) TGTTGACCTTGC 1 chr12:66751643-66752143 ( 88) TGTTTTTATTTG 1 chr8:25998475-25998975 ( 42) TGTTTAATTTGT 1 chr14:36955972-36956472 ( 16) TGTTTTCTCTCC 1 chr7:33669144-33669644 ( 58) TGTTGATCTTGC 1 chr4:111883490-111883990 ( 77) TGTTTGTTTTCA 1 chr16:12120436-12120936 ( 36) TGTTTATGTTTG 1 chr11:92868163-92868663 ( 31) TGTTTTTACTGT 1 chr12:51405731-51406231 ( 87) TGTTTGTCTTAT 1 chr12:54052075-54052575 ( 78) TGTTTATGTTTT 1 chr3:169526186-169526686 ( 81) TGTTTACTTAAA 1 chr1:58779925-58780425 ( 21) TGTTTGCTCATT 1 chr19:40920945-40921445 ( 39) TGTTTACCCTGA 1 chr5:74632108-74632608 ( 48) TGTTTATTCAAG 1 chr1:59214665-59215165 ( 9) TGTTTGTATAAC 1 chr1:201721118-201721618 ( 70) TGTTTACATTAA 1 chr6:1667161-1667661 ( 85) TGTTTATACTGA 1 chr22:24727032-24727532 ( 46) TGTTGACTTTAT 1 chr7:22548262-22548762 ( 33) TGTTTGCATAAG 1 chr11:66789312-66789812 ( 27) TGTTTACCCTCC 1 chr3:188272547-188273047 ( 53) TGTTTATATAAT 1 chr3:172140650-172141150 ( 3) TGTTTATTCTTA 1 chr8:109611165-109611665 ( 72) TGTTTATCTTTA 1 chr18:23684577-23685077 ( 43) TGTTGTCATTGC 1 chr10:126249961-12625046 ( 28) TGTTTATATACT 1 chr1:220918448-220918948 ( 11) TGTTTATATACT 1 chr13:37046921-37047421 ( 47) TGTTTTCTCATG 1 chr12:106074939-10607543 ( 1) TGTTTATGTTAT 1 chr19:28520336-28520836 ( 1) TGTTGATTTATC 1 chr11:115452199-11545269 ( 62) TGTTGACATAGG 1 chr4:110904623-110905123 ( 26) TGTTGGTTTTAG 1 chr7:83267138-83267638 ( 8) TGTTTTATTTGT 1 chr10:121819030-12181953 ( 35) TGTTTTCATTTA 1 chr13:99677542-99678042 ( 42) TGTTTTATTTGT 1 chr14:99821632-99822132 ( 84) TGTTTGTTCACT 1 chr20:5582150-5582650 ( 67) TGTTTATGTATG 1 chr21:33136827-33137327 ( 80) TGTTTTCTTAAA 1 chr3:61634650-61635150 ( 55) TGTTGATATAGT 1 chr20:45017806-45018306 ( 69) TGTTTTTGTTAC 1 chr13:87123853-87124353 ( 32) TGTTTTTATACG 1 chr3:171801819-171802319 ( 73) TGTTTTCCTAAT 1 chr17:68381072-68381572 ( 29) TGTTGATATTTT 1 chr4:8044644-8045144 ( 30) TGTTTATAGTGG 1 chr2:48732937-48733437 ( 71) TGTTTACATAAA 1 chr10:33271916-33272416 ( 25) TGTTTACATAAA 1 chr1:85297832-85298332 ( 59) TGTTGACTTAAT 1 chr1:68217000-68217500 ( 1) TGTTTATAGTGT 1 chr13:106096584-10609708 ( 23) TATTTACTTTGT 1 chr14:68140202-68140702 ( 62) TGTTTACTGTAG 1 chr10:44752840-44753340 ( 34) TGTTTATACAAT 1 chr1:233241765-233242265 ( 8) TGTTTAATTATC 1 chr15:70507800-70508300 ( 34) TGTTTACTCACA 1 chr8:17540093-17540593 ( 56) TGTTTTTCTAAT 1 chr6:16754787-16755287 ( 56) TGTTTGCCTATA 1 chr6:43321903-43322403 ( 66) TGTTTTTATTCA 1 chr6:54879150-54879650 ( 2) TGTTTTATTAGG 1 chr1:234700146-234700646 ( 78) TGTTATTTTTGC 1 chr1:168801355-168801855 ( 63) TGTTTATTGTAT 1 chr8:71496063-71496563 ( 18) TGTTAGCTTAGC 1 chr2:175805423-175805923 ( 12) TGTTTAATCTTC 1 chr4:20272369-20272869 ( 61) TATTTGTTTTGT 1 chr1:145740173-145740673 ( 58) TATTTACTCTGC 1 chr3:77191644-77192144 ( 62) TGTTTATCGTTC 1 chr5:72246989-72247489 ( 26) TGTTTTTATAAA 1 chr6:91299548-91300048 ( 61) TATTTATATTGG 1 chr11:92331201-92331701 ( 89) TGTTATTTTAGC 1 chr18:42850138-42850638 ( 34) TGTTTATGCACG 1 chr5:69517658-69518158 ( 80) TGTTAGTTTTCG 1 chr4:74202024-74202524 ( 62) TGTTTACTCGTG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGTTTAYTTTKB MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 12 n= 53311 bayes= 9.32486 E= 3.2e-046 -1396 -1396 -1396 177 -354 -1396 224 -1396 -1396 -1396 -1396 177 -1396 -1396 -1396 177 -354 -1396 -123 160 80 -1396 28 -29 -296 115 -1396 78 -41 -65 -187 101 -1396 1 -272 138 13 -1396 -504 120 -64 -87 113 -26 -129 66 25 7 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGTTTAYTTTKB MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 12 nsites= 159 E= 3.2e-046 0.000000 0.000000 0.000000 1.000000 0.025157 0.000000 0.974843 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.025157 0.000000 0.088050 0.886792 0.509434 0.000000 0.251572 0.238994 0.037736 0.459119 0.000000 0.503145 0.220126 0.132075 0.056604 0.591195 0.000000 0.207547 0.031447 0.761006 0.320755 0.000000 0.006289 0.672956 0.188679 0.113208 0.452830 0.245283 0.119497 0.327044 0.245283 0.308176 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGTTTAYTTTKB MEME-2 regular expression -------------------------------------------------------------------------------- TGTTT[AGT][TC][TA][TC][TA][GT][CTG] -------------------------------------------------------------------------------- Time 664.34 secs. ******************************************************************************** ******************************************************************************** MOTIF CCTGCTGTG MEME-3 width = 9 sites = 52 llr = 539 E-value = 1.2e-019 ******************************************************************************** -------------------------------------------------------------------------------- Motif CCTGCTGTG MEME-3 Description -------------------------------------------------------------------------------- Simplified A 1::::1:2: pos.-specific C 9a1:a:::: probability G :::a:1a38 matrix T ::9::8:52 bits 2.3 * ** * 2.0 * ** * 1.8 * ** * 1.6 ** ** * Relative 1.4 ***** * * Entropy 1.1 ******* * (14.9 bits) 0.9 ******* * 0.7 ******* * 0.5 ********* 0.2 ********* 0.0 --------- Multilevel CCTGCTGTG consensus GT sequence A -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCTGCTGTG MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- --------- chr17:3890061-3890561 + 10 1.98e-06 TTGACGACT CCTGCTGTG AGGACGCCCG chr9:135329983-135330483 + 83 1.98e-06 AGTGTGCAGC CCTGCTGTG AAAATTACT chr6:128066839-128067339 + 66 1.98e-06 GTTTTATTAG CCTGCTGTG GAACACGCAT chr10:72228276-72228776 + 90 1.98e-06 TGTATTGCTA CCTGCTGTG TT chr9:111961498-111961998 + 43 1.98e-06 tcattgagca cctgctgtg tcttggcact chr22:24026697-24027197 + 25 1.98e-06 acaaacagac cctgctgtg atgtttattg chr8:30254801-30255301 - 28 1.98e-06 TTGTTGAGAT CCTGCTGTG CTTCAGACAA chr3:186319893-186320393 - 7 1.98e-06 AGAGCACTTC CCTGCTGTG CATATT chr18:395716-396216 + 17 1.98e-06 CATGTTTATT CCTGCTGTG GACCCAGCCA chr2:206230212-206230712 - 35 1.98e-06 AGCAGGGATC CCTGCTGTG AACCTGCTGC chr12:89769185-89769685 + 14 1.98e-06 atgatgaaat cctgctgtg cgcaactaac chr4:23818163-23818663 + 51 1.98e-06 GTCAAAAGAG CCTGCTGTG CAGAGCAACA chr4:110904623-110905123 - 54 3.38e-06 TCTACAATCT CCTGCTGGG TTTCATTTGA chr8:29126517-29127017 + 34 3.38e-06 CAATGCTCTC CCTGCTGGG TTTATAGTCC chr7:81299211-81299711 + 25 3.38e-06 ATAATAAATC CCTGCTGGG CTGTACTGTG chr16:22232694-22233194 - 68 3.38e-06 ACACCCAATA CCTGCTGGG TGTGTTCCTT chr9:16953996-16954496 + 21 3.38e-06 TGTTTATAGC CCTGCTGGG CTCACTTGTT chr19:28596479-28596979 + 60 3.38e-06 AGAGCAGGCA CCTGCTGGG GCCCTGAAAT chr17:27915608-27916108 + 61 3.38e-06 TGACGACACC CCTGCTGGG TCCAGCCTCA chr2:60633567-60634067 - 36 5.36e-06 CACTTTCTCT CCTGCTGAG AAATTAACAC chr5:136420522-136421022 + 77 5.36e-06 CTCTGTCCCT CCTGCTGAG AGCTTCCCCA chr6:54879150-54879650 + 27 5.36e-06 GATTATCTAC CCTGCTGAG AAGCAGAACC chr1:59261502-59262002 - 89 5.36e-06 AAT CCTGCTGAG TTTCCAACAG chr4:80307274-80307774 + 58 8.16e-06 ACCTTGCTTC CCTGCTGTT CCTGACAGCA chr4:53943648-53944148 + 42 8.16e-06 GCCTTTCCTT CCTGCTGTT TAATAATGCC chr13:21043940-21044440 - 64 8.16e-06 TGAAATGAAT CCTGCTGTT TTATAGAGGG chrX:12240417-12240917 - 86 8.16e-06 GACACC CCTGCTGTT TTAATCACAT chr14:96888511-96889011 + 60 8.16e-06 CCCAAGCTCT CCTGCTGTT TCTAATCTGT chr8:50056573-50057073 - 52 8.16e-06 AGCCCAGTGT CCTGCTGTT CCAGCAATCC chr4:111883490-111883990 + 22 1.15e-05 CTGAGCCTCC CCCGCTGTG TCAGGATAAA chr10:7433224-7433724 + 48 1.15e-05 ACAAGCCATT CCTGCTGGT AAAATAATTG chr4:185914645-185915145 + 73 1.15e-05 TCGTTTGATC CCTGCTGGT GGGAGAAAGC chr5:59317174-59317674 - 59 1.15e-05 GTTAGGGAAG CCTGCTGGT GTCCTGCCTG chr6:21264311-21264811 + 37 1.29e-05 ATTTAAGATC CCTGCGGTG TGAAGGAAGT chr18:49655995-49656495 - 35 1.29e-05 AGCCATCAAG CCTGCGGTG CAATATCCCT chr11:123213185-12321368 + 92 1.29e-05 taaaaaactt cctgcggtg chr18:59484756-59485256 + 56 1.57e-05 AACTACAAAC ACTGCTGTG TGGTTTTTAT chr7:105024702-105025202 - 63 1.57e-05 CCCAATTTGT ACTGCTGTG ATTTTAATTC chr15:36925631-36926131 + 37 1.57e-05 AACAAACAAT ACTGCTGTG AAATTGGTTT chr6:123841208-123841708 - 90 2.25e-05 TC CCTGCAGTG ATAAGGGCAG chr6:138088174-138088674 - 63 2.25e-05 GAAATGGAAT CCTGCTGAT TTAAATGGCA chr1:38724121-38724621 - 29 2.25e-05 TAGGAAGCTT CCTGCAGTG TCAGAGCTGA chr20:20215869-20216369 - 10 2.45e-05 TGTTTGCATG ACTGCTGGG GCTATAAAA chr8:37359521-37360021 - 11 2.73e-05 ATTACTCCAG CCCGCTGAG GTCACCTTCC chr1:87718279-87718779 - 39 2.73e-05 TAGATAAAAA CCTGCAGGG TGTTTCTGTA chr13:112213419-11221391 - 57 2.73e-05 GTGCCCCACA CCTGCAGGG GGCAGTGACT chr10:33325898-33326398 - 14 3.15e-05 TGTGACAAAT ACTGCTGAG CAAAGAGGTG chr11:92868163-92868663 - 43 3.15e-05 ATTTACATAC ACTGCTGAG ACAGTAAAAA chr5:175385676-175386176 - 63 3.15e-05 ATTCCTTTTT ACTGCTGAG TGGTTTTCTA chr15:96053095-96053595 - 87 3.54e-05 GGCTC CCCGCTGTT TAACGACAAT chr10:36423717-36424217 + 52 6.08e-05 GCAGTGGAAT CCCGCTGAT TTACTACTTA chr9:82923409-82923909 + 35 7.71e-05 TCTCCGAAGC CCCGCGGAG CTGCTGAAAA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCTGCTGTG MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr17:3890061-3890561 2e-06 9_[+3]_82 chr9:135329983-135330483 2e-06 82_[+3]_9 chr6:128066839-128067339 2e-06 65_[+3]_26 chr10:72228276-72228776 2e-06 89_[+3]_2 chr9:111961498-111961998 2e-06 42_[+3]_49 chr22:24026697-24027197 2e-06 24_[+3]_67 chr8:30254801-30255301 2e-06 27_[-3]_64 chr3:186319893-186320393 2e-06 6_[-3]_85 chr18:395716-396216 2e-06 16_[+3]_75 chr2:206230212-206230712 2e-06 34_[-3]_57 chr12:89769185-89769685 2e-06 13_[+3]_78 chr4:23818163-23818663 2e-06 50_[+3]_41 chr4:110904623-110905123 3.4e-06 53_[-3]_38 chr8:29126517-29127017 3.4e-06 33_[+3]_58 chr7:81299211-81299711 3.4e-06 24_[+3]_67 chr16:22232694-22233194 3.4e-06 67_[-3]_24 chr9:16953996-16954496 3.4e-06 20_[+3]_71 chr19:28596479-28596979 3.4e-06 59_[+3]_32 chr17:27915608-27916108 3.4e-06 60_[+3]_31 chr2:60633567-60634067 5.4e-06 35_[-3]_56 chr5:136420522-136421022 5.4e-06 76_[+3]_15 chr6:54879150-54879650 5.4e-06 26_[+3]_65 chr1:59261502-59262002 5.4e-06 88_[-3]_3 chr4:80307274-80307774 8.2e-06 57_[+3]_34 chr4:53943648-53944148 8.2e-06 41_[+3]_50 chr13:21043940-21044440 8.2e-06 63_[-3]_28 chrX:12240417-12240917 8.2e-06 85_[-3]_6 chr14:96888511-96889011 8.2e-06 59_[+3]_32 chr8:50056573-50057073 8.2e-06 51_[-3]_40 chr4:111883490-111883990 1.2e-05 21_[+3]_70 chr10:7433224-7433724 1.2e-05 47_[+3]_44 chr4:185914645-185915145 1.2e-05 72_[+3]_19 chr5:59317174-59317674 1.2e-05 58_[-3]_33 chr6:21264311-21264811 1.3e-05 36_[+3]_55 chr18:49655995-49656495 1.3e-05 34_[-3]_57 chr11:123213185-12321368 1.3e-05 91_[+3] chr18:59484756-59485256 1.6e-05 55_[+3]_36 chr7:105024702-105025202 1.6e-05 62_[-3]_29 chr15:36925631-36926131 1.6e-05 36_[+3]_55 chr6:123841208-123841708 2.2e-05 89_[-3]_2 chr6:138088174-138088674 2.2e-05 62_[-3]_29 chr1:38724121-38724621 2.2e-05 28_[-3]_63 chr20:20215869-20216369 2.4e-05 9_[-3]_82 chr8:37359521-37360021 2.7e-05 10_[-3]_81 chr1:87718279-87718779 2.7e-05 38_[-3]_53 chr13:112213419-11221391 2.7e-05 56_[-3]_35 chr10:33325898-33326398 3.1e-05 13_[-3]_78 chr11:92868163-92868663 3.1e-05 42_[-3]_49 chr5:175385676-175386176 3.1e-05 62_[-3]_29 chr15:96053095-96053595 3.5e-05 86_[-3]_5 chr10:36423717-36424217 6.1e-05 51_[+3]_40 chr9:82923409-82923909 7.7e-05 34_[+3]_57 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCTGCTGTG MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CCTGCTGTG width=9 seqs=52 chr17:3890061-3890561 ( 10) CCTGCTGTG 1 chr9:135329983-135330483 ( 83) CCTGCTGTG 1 chr6:128066839-128067339 ( 66) CCTGCTGTG 1 chr10:72228276-72228776 ( 90) CCTGCTGTG 1 chr9:111961498-111961998 ( 43) CCTGCTGTG 1 chr22:24026697-24027197 ( 25) CCTGCTGTG 1 chr8:30254801-30255301 ( 28) CCTGCTGTG 1 chr3:186319893-186320393 ( 7) CCTGCTGTG 1 chr18:395716-396216 ( 17) CCTGCTGTG 1 chr2:206230212-206230712 ( 35) CCTGCTGTG 1 chr12:89769185-89769685 ( 14) CCTGCTGTG 1 chr4:23818163-23818663 ( 51) CCTGCTGTG 1 chr4:110904623-110905123 ( 54) CCTGCTGGG 1 chr8:29126517-29127017 ( 34) CCTGCTGGG 1 chr7:81299211-81299711 ( 25) CCTGCTGGG 1 chr16:22232694-22233194 ( 68) CCTGCTGGG 1 chr9:16953996-16954496 ( 21) CCTGCTGGG 1 chr19:28596479-28596979 ( 60) CCTGCTGGG 1 chr17:27915608-27916108 ( 61) CCTGCTGGG 1 chr2:60633567-60634067 ( 36) CCTGCTGAG 1 chr5:136420522-136421022 ( 77) CCTGCTGAG 1 chr6:54879150-54879650 ( 27) CCTGCTGAG 1 chr1:59261502-59262002 ( 89) CCTGCTGAG 1 chr4:80307274-80307774 ( 58) CCTGCTGTT 1 chr4:53943648-53944148 ( 42) CCTGCTGTT 1 chr13:21043940-21044440 ( 64) CCTGCTGTT 1 chrX:12240417-12240917 ( 86) CCTGCTGTT 1 chr14:96888511-96889011 ( 60) CCTGCTGTT 1 chr8:50056573-50057073 ( 52) CCTGCTGTT 1 chr4:111883490-111883990 ( 22) CCCGCTGTG 1 chr10:7433224-7433724 ( 48) CCTGCTGGT 1 chr4:185914645-185915145 ( 73) CCTGCTGGT 1 chr5:59317174-59317674 ( 59) CCTGCTGGT 1 chr6:21264311-21264811 ( 37) CCTGCGGTG 1 chr18:49655995-49656495 ( 35) CCTGCGGTG 1 chr11:123213185-12321368 ( 92) CCTGCGGTG 1 chr18:59484756-59485256 ( 56) ACTGCTGTG 1 chr7:105024702-105025202 ( 63) ACTGCTGTG 1 chr15:36925631-36926131 ( 37) ACTGCTGTG 1 chr6:123841208-123841708 ( 90) CCTGCAGTG 1 chr6:138088174-138088674 ( 63) CCTGCTGAT 1 chr1:38724121-38724621 ( 29) CCTGCAGTG 1 chr20:20215869-20216369 ( 10) ACTGCTGGG 1 chr8:37359521-37360021 ( 11) CCCGCTGAG 1 chr1:87718279-87718779 ( 39) CCTGCAGGG 1 chr13:112213419-11221391 ( 57) CCTGCAGGG 1 chr10:33325898-33326398 ( 14) ACTGCTGAG 1 chr11:92868163-92868663 ( 43) ACTGCTGAG 1 chr5:175385676-175386176 ( 63) ACTGCTGAG 1 chr15:96053095-96053595 ( 87) CCCGCTGTT 1 chr10:36423717-36424217 ( 52) CCCGCTGAT 1 chr9:82923409-82923909 ( 35) CCCGCGGAG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCTGCTGTG MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 9 n= 55108 bayes= 11.6791 E= 1.2e-019 -112 206 -1234 -1234 -1234 227 -1234 -1234 -1234 -110 -1234 162 -1234 -1234 227 -1234 -1234 227 -1234 -1234 -193 -1234 -143 153 -1234 -1234 227 -1234 -47 -1234 27 88 -1234 -1234 189 -35 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCTGCTGTG MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 9 nsites= 52 E= 1.2e-019 0.134615 0.865385 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.096154 0.000000 0.903846 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.076923 0.000000 0.076923 0.846154 0.000000 0.000000 1.000000 0.000000 0.211538 0.000000 0.250000 0.538462 0.000000 0.000000 0.769231 0.230769 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCTGCTGTG MEME-3 regular expression -------------------------------------------------------------------------------- CCTGCTG[TGA][GT] -------------------------------------------------------------------------------- Time 960.09 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr11:92331201-92331701 1.50e-03 3_[-1(3.69e-05)]_48 chr13:112213419-11221391 4.50e-02 56_[-3(2.73e-05)]_35 chr1:231037946-231038446 5.79e-03 68_[+2(3.40e-06)]_20 chr5:124742196-124742696 7.63e-01 100 chr2:178484552-178485052 6.62e-01 100 chr6:124822064-124822564 3.83e-01 100 chr19:2983984-2984484 4.17e-01 100 chr3:44995225-44995725 3.60e-02 5_[-2(1.75e-05)]_83 chr19:32398352-32398852 7.63e-21 26_[-1(7.43e-25)]_25 chr1:59261502-59262002 1.23e-02 88_[-3(5.36e-06)]_3 chr15:36925631-36926131 1.24e-02 36_[+3(1.57e-05)]_55 chr4:23818163-23818663 1.39e-03 50_[+3(1.98e-06)]_41 chr7:21941523-21942023 5.88e-01 100 chr17:27915608-27916108 2.10e-02 60_[+3(3.38e-06)]_31 chr20:41059184-41059684 1.31e-22 24_[-1(1.51e-26)]_27 chr17:40325030-40325530 5.33e-23 21_[-1(7.53e-27)]_30 chr19:34234636-34235136 7.96e-22 29_[+1(9.21e-26)]_22 chr5:174503806-174504306 4.80e-01 100 chr1:16120929-16121429 1.82e-02 6_[-2(1.75e-05)]_82 chrX:136046983-136047483 1.17e-02 55_[-2(3.86e-05)]_33 chr10:121831742-12183224 8.63e-03 35_[-2(2.40e-06)]_53 chr4:156959197-156959697 2.24e-01 100 chr17:32298891-32299391 3.19e-02 100 chr5:88243455-88243955 4.28e-01 100 chr1:24043447-24043947 5.01e-04 56_[+2(7.56e-06)]_32 chr10:72098722-72099222 7.58e-01 100 chr15:55825189-55825689 6.51e-01 100 chr4:156815648-156816148 4.04e-01 100 chr7:100264548-100265048 2.19e-01 100 chr12:51405731-51406231 7.57e-02 86_[-2(7.52e-05)]_2 chr11:123213185-12321368 1.19e-02 91_[+3(1.29e-05)] chr10:74256039-74256539 3.61e-01 100 chr2:109261151-109261651 1.04e-02 28_[+2(1.75e-05)]_60 chr5:139489857-139490357 1.14e-22 26_[+1(1.51e-26)]_25 chr5:82387250-82387750 2.54e-02 100 chr10:89861901-89862401 4.96e-01 100 chr4:128393055-128393555 6.82e-01 100 chr8:28258758-28259258 3.93e-01 100 chr6:129183828-129184328 9.14e-04 65_[+2(3.40e-06)]_23 chr22:38606503-38607003 8.30e-01 100 chr2:23921179-23921679 3.53e-01 100 chr12:106074939-10607543 3.65e-02 100 chr12:108822716-10882321 5.84e-01 100 chr2:100005014-100005514 7.56e-05 68_[-2(6.93e-07)]_20 chr13:99677542-99678042 4.69e-03 100 chr10:87761898-87762398 8.67e-01 100 chr12:89769185-89769685 1.07e-03 13_[+3(1.98e-06)]_78 chr15:96053095-96053595 3.62e-03 86_[-3(3.54e-05)]_5 chr10:10989646-10990146 6.89e-03 56_[-2(1.46e-06)]_32 chr1:234700146-234700646 6.83e-02 100 chr13:39148456-39148956 1.76e-01 100 chr4:38150223-38150723 7.78e-03 13_[-2(1.51e-05)]_75 chr22:18020690-18021190 3.59e-22 30_[-1(5.36e-26)]_21 chr11:131998015-13199851 2.02e-01 100 chr5:16889671-16890171 3.71e-01 100 chr2:212299957-212300457 1.64e-01 100 chr18:494175-494675 1.76e-01 100 chr10:20958712-20959212 6.99e-03 33_[-2(3.86e-05)]_55 chr12:38890022-38890522 6.93e-01 100 chr1:175841774-175842274 2.63e-03 26_[+2(5.98e-06)]_62 chr5:32157746-32158246 6.82e-20 31_[-1(8.51e-24)]_20 chr20:25252784-25253284 9.50e-01 100 chr1:182175310-182175810 1.80e-02 69_[-3(8.86e-05)]_22 chr3:31165433-31165933 4.94e-02 100 chr1:225654693-225655193 2.95e-17 24_[-1(7.63e-21)]_27 chr1:85297832-85298332 6.43e-02 100 chr10:26524157-26524657 8.00e-04 46_[-2(1.51e-05)]_42 chr6:1850783-1851283 4.61e-02 100 chr10:33271916-33272416 1.76e-01 100 chr7:26534950-26535450 2.68e-01 100 chr3:193970364-193970864 1.01e-22 26_[-1(7.53e-27)]_25 chr2:138177637-138178137 8.04e-03 41_[+1(2.65e-05)]_10 chr5:175385676-175386176 1.13e-05 23_[-2(5.98e-06)]_27_[-3(3.15e-05)]_\ 29 chr6:16757291-16757791 4.53e-02 100 chr7:92534571-92535071 6.77e-03 20_[-3(4.79e-05)]_71 chr1:145740173-145740673 1.84e-01 100 chr8:50056573-50057073 3.38e-02 51_[-3(8.16e-06)]_40 chr20:46085114-46085614 2.02e-03 22_[+2(3.86e-05)]_66 chr11:15370652-15371152 1.88e-01 100 chr13:20814580-20815080 3.82e-01 100 chr10:126247489-12624798 8.87e-02 100 chr12:107380062-10738056 3.83e-02 70_[+2(5.37e-05)]_18 chr11:92868163-92868663 3.60e-04 30_[+2(7.52e-05)]_[-3(3.15e-05)]_49 chr15:69591895-69592395 3.53e-02 21_[-2(2.10e-05)]_67 chr3:189458457-189458957 1.57e-01 100 chr9:23731384-23731884 7.80e-01 100 chr6:16754787-16755287 7.23e-02 100 chr10:74833360-74833860 1.57e-01 100 chr4:20337249-20337749 9.31e-01 100 chr5:59317174-59317674 1.46e-02 58_[-3(1.15e-05)]_33 chr10:125633458-12563395 6.32e-01 100 chr2:223815123-223815623 5.78e-01 100 chr11:117019298-11701979 2.51e-01 100 chr2:196853408-196853908 2.37e-02 100 chr1:38724121-38724621 1.67e-03 28_[-3(2.25e-05)]_6_[-2(3.42e-05)]_\ 45 chr13:51638390-51638890 1.09e-01 100 chr10:12448713-12449213 9.49e-01 100 chr5:32367215-32367715 1.49e-14 33_[-1(4.48e-18)]_18 chr10:114525338-11452583 5.61e-01 100 chr14:36955972-36956472 7.17e-02 15_[+2(6.73e-05)]_73 chr11:20070419-20070919 2.08e-02 33_[+2(7.56e-06)]_55 chr1:212596155-212596655 4.35e-03 34_[+2(9.10e-06)]_54 chr22:30195864-30196364 8.06e-01 100 chr5:124908916-124909416 1.81e-01 100 chr5:93677282-93677782 1.87e-01 100 chr15:70426337-70426837 5.17e-01 100 chr17:51650137-51650637 5.33e-01 100 chr6:116945718-116946218 7.61e-01 100 chr10:33325898-33326398 3.40e-02 13_[-3(3.15e-05)]_78 chr3:171790741-171791241 4.58e-02 100 chr9:86731438-86731938 1.49e-02 19_[+2(2.94e-05)]_69 chr5:69517658-69518158 2.73e-01 100 chr12:66319252-66319752 9.97e-02 100 chr1:169942305-169942805 3.67e-03 1_[-2(1.46e-06)]_87 chr6:150403464-150403964 7.52e-01 100 chr2:206230212-206230712 1.45e-02 34_[-3(1.98e-06)]_57 chr3:17553997-17554497 3.71e-01 100 chr5:78050779-78051279 2.73e-01 100 chr3:123431512-123432012 8.30e-01 100 chr18:395716-396216 4.20e-03 16_[+3(1.98e-06)]_75 chr6:684067-684567 1.02e-01 34_[-2(4.83e-05)]_54 chr20:57579945-57580445 6.93e-01 100 chr6:84362108-84362608 2.94e-01 100 chr14:96888511-96889011 2.86e-02 59_[+3(8.16e-06)]_32 chr7:146655891-146656391 8.05e-01 100 chr5:34608752-34609252 8.05e-01 100 chr6:13006937-13007437 6.86e-04 16_[+1(4.95e-05)]_4_[-2(2.10e-05)]_\ 19 chr5:174371579-174372079 1.61e-01 49_[+3(8.44e-05)]_42 chr2:48732937-48733437 1.73e-02 100 chr12:66751643-66752143 9.52e-02 87_[-2(6.02e-05)]_1 chr8:17540093-17540593 1.66e-01 100 chr3:169542254-169542754 5.25e-01 100 chr1:219324930-219325430 1.53e-01 100 chr13:42071981-42072481 6.80e-01 100 chr15:70526426-70526926 7.38e-01 100 chr17:43670017-43670517 2.21e-03 41_[-3(2.45e-05)]_50 chr10:72173640-72174140 9.96e-01 100 chr1:3419785-3420285 8.20e-02 39_[+2(2.94e-05)]_49 chr2:175805423-175805923 1.08e-01 100 chr8:71496063-71496563 1.35e-01 100 chr16:77409263-77409763 4.19e-01 100 chr22:42964959-42965459 2.81e-01 100 chr16:21820748-21821248 3.18e-20 29_[+1(4.97e-24)]_22 chr1:179930918-179931418 6.90e-01 100 chr20:5582150-5582650 1.00e-01 100 chr1:237166697-237167197 2.83e-01 100 chr3:140186383-140186883 7.13e-01 100 chr3:112090493-112090993 3.38e-01 100 chr17:67978478-67978978 2.73e-01 100 chr1:175470970-175471470 7.62e-01 100 chr6:16849338-16849838 3.79e-01 100 chr5:17326442-17326942 5.69e-01 100 chr11:115452199-11545269 1.87e-02 100 chr17:71163452-71163952 1.06e-02 8_[-2(3.42e-05)]_80 chr8:105090167-105090667 8.96e-01 100 chr3:172140650-172141150 1.32e-01 2_[+2(9.10e-05)]_86 chr5:123157658-123158158 4.06e-01 100 chr15:70507800-70508300 2.00e-01 100 chr1:101288497-101288997 1.06e-01 32_[+3(7.23e-05)]_59 chrX:24145691-24146191 8.72e-02 100 chr5:83097790-83098290 7.24e-01 100 chr1:240515407-240515907 1.09e-01 100 chr5:99900439-99900939 8.38e-03 57_[+2(1.08e-05)]_31 chr5:127934854-127935354 3.68e-03 67_[+2(9.10e-06)]_21 chr4:8044644-8045144 4.81e-02 100 chr11:93986654-93987154 6.82e-01 100 chr3:182365054-182365554 4.56e-01 100 chr21:36122964-36123464 8.65e-21 22_[-1(6.68e-24)]_29 chr19:31332880-31333380 1.83e-21 24_[-1(2.40e-25)]_27 chr5:125326104-125326604 6.88e-01 100 chr6:54879150-54879650 1.82e-03 26_[+3(5.36e-06)]_65 chr11:34222874-34223374 5.78e-01 100 chr1:52955572-52956072 3.03e-01 100 chr5:34598249-34598749 3.07e-01 100 chr16:80982534-80983034 6.47e-01 100 chr14:68140202-68140702 2.86e-02 100 chr11:32890783-32891283 4.41e-01 100 chr18:74861053-74861553 2.17e-01 100 chr3:156161124-156161624 1.13e-04 28_[+2(3.40e-06)]_60 chr5:77995984-77996484 4.88e-01 100 chr19:28520336-28520836 2.61e-02 100 chr11:72308465-72308965 2.90e-01 100 chr3:188272547-188273047 2.52e-02 52_[-2(9.10e-05)]_36 chr1:168801355-168801855 7.75e-02 100 chr10:2882566-2883066 3.63e-01 100 chr15:71279078-71279578 6.76e-01 100 chr5:38782988-38783488 9.55e-02 52_[-2(4.34e-05)]_36 chr10:121500888-12150138 2.89e-01 100 chr5:5340244-5340744 3.00e-01 100 chr14:73125212-73125712 1.31e-01 100 chr2:188573438-188573938 9.76e-03 11_[+2(1.51e-05)]_77 chr2:109029732-109030232 2.00e-08 19_[+1(1.66e-12)]_32 chr1:184930564-184931064 4.75e-01 100 chr5:107533909-107534409 7.48e-02 100 chr9:123687166-123687666 4.06e-01 100 chr6:108676484-108676984 9.04e-01 100 chr1:220918448-220918948 9.56e-02 10_[-2(9.89e-05)]_78 chr2:24540019-24540519 1.70e-01 100 chr17:17958279-17958779 5.09e-01 100 chr15:58332055-58332555 8.09e-01 100 chr10:33388265-33388765 3.84e-02 100 chr1:68384328-68384828 4.51e-01 100 chr4:89847611-89848111 1.39e-01 100 chr1:223518464-223518964 7.23e-01 100 chr15:81950773-81951273 1.40e-02 19_[+2(1.75e-05)]_69 chr8:71711444-71711944 5.09e-02 3_[-2(4.34e-05)]_85 chr15:55740860-55741360 3.25e-01 100 chr20:53611352-53611852 2.66e-01 100 chr5:90547962-90548462 2.21e-02 52_[+2(1.25e-05)]_36 chr3:186319893-186320393 1.45e-05 6_[-3(1.98e-06)]_36_[+1(8.33e-05)] chr11:66789312-66789812 1.11e-01 26_[-2(9.10e-05)]_62 chr4:144356317-144356817 6.97e-01 100 chr5:115873322-115873822 4.73e-01 100 chr17:68381072-68381572 2.98e-03 1_[+1(3.94e-05)]_50 chr1:228902969-228903469 3.90e-02 25_[+2(2.52e-05)]_63 chr5:124662172-124662672 9.14e-01 100 chr3:16476646-16477146 4.68e-01 100 chr3:171801819-171802319 6.40e-03 100 chr3:157477399-157477899 2.43e-02 24_[-1(3.24e-05)]_27 chr1:58779925-58780425 3.89e-02 20_[-2(8.31e-05)]_68 chr1:195590663-195591163 2.16e-01 100 chr5:90296962-90297462 4.05e-01 100 chr8:37380731-37381231 5.75e-01 100 chr6:138088174-138088674 3.43e-02 62_[-3(2.25e-05)]_29 chrX:118964191-118964691 4.52e-01 100 chr6:8939605-8940105 3.35e-05 13_[+2(5.52e-07)]_75 chr1:221393905-221394405 9.05e-01 100 chr6:150196077-150196577 7.52e-02 100 chr6:133248608-133249108 9.41e-12 50_[+1(1.56e-13)]_1 chr4:173252322-173252822 2.01e-01 100 chr1:62311546-62312046 5.29e-01 100 chr12:71626706-71627206 8.40e-03 64_[-2(1.08e-05)]_24 chr7:42152439-42152939 7.68e-02 86_[-2(6.02e-05)]_2 chr17:35567290-35567790 4.14e-20 26_[-1(6.24e-23)]_25 chr12:82861964-82862464 9.10e-01 100 chr1:177340505-177341005 8.21e-01 100 chr7:105024702-105025202 5.22e-02 62_[-3(1.57e-05)]_29 chr2:111185559-111186059 7.05e-02 61_[+3(8.10e-05)]_30 chr15:95556838-95557338 1.36e-01 100 chr14:96574836-96575336 8.28e-01 100 chr8:30254801-30255301 3.98e-03 27_[-3(1.98e-06)]_64 chr1:3402103-3402603 2.73e-01 100 chr1:229218491-229218991 5.90e-02 14_[+2(4.83e-05)]_74 chr7:2157574-2158074 2.75e-02 26_[+2(9.10e-06)]_62 chr5:126000449-126000949 3.54e-01 100 chr10:15796073-15796573 4.72e-01 100 chr6:151357950-151358450 5.86e-02 100 chr10:35890236-35890736 3.14e-02 76_[-2(3.42e-05)]_12 chr4:19823713-19824213 1.56e-03 34_[+2(6.93e-07)]_54 chr3:9194424-9194924 6.85e-03 47_[-2(2.10e-05)]_11_[-2(2.10e-05)]_\ 18 chrX:23944266-23944766 6.52e-03 86_[+2(6.02e-05)]_2 chr3:190973652-190974152 7.17e-01 100 chr7:120806649-120807149 1.10e-01 100 chr5:136420522-136421022 1.09e-05 29_[+2(1.06e-06)]_35_[+3(5.36e-06)]_\ 15 chr10:72580219-72580719 8.11e-12 21_[+1(3.54e-15)]_30 chr10:121819030-12181953 4.94e-02 100 chr11:93279841-93280341 1.85e-01 100 chr10:99519974-99520474 8.71e-03 63_[+2(4.51e-06)]_25 chrX:12240417-12240917 9.13e-04 85_[-3(8.16e-06)]_6 chr4:141040992-141041492 1.03e-01 100 chr12:58925043-58925543 6.52e-01 100 chr22:24026697-24027197 4.35e-04 24_[+3(1.98e-06)]_67 chr20:64030490-64030990 1.60e-01 100 chr9:111961498-111961998 3.58e-04 42_[+3(1.98e-06)]_49 chr1:220119021-220119521 8.11e-01 100 chr2:38440606-38441106 4.30e-02 100 chr15:98896878-98897378 3.55e-01 100 chr15:77067292-77067792 2.41e-02 73_[-2(2.10e-05)]_15 chr3:123936275-123936775 2.58e-02 100 chr12:114656125-11465662 6.46e-01 100 chr2:224678224-224678724 2.11e-01 100 chr8:37452591-37453091 2.21e-01 100 chr9:108477446-108477946 2.64e-02 100 chr7:114530080-114530580 5.09e-02 100 chr6:125913843-125914343 9.07e-01 100 chr10:7311240-7311740 8.92e-01 100 chr13:79918541-79919041 1.38e-01 100 chr17:48492589-48493089 1.74e-02 19_[+2(4.51e-06)]_69 chr1:219279332-219279832 2.37e-01 100 chr3:78994503-78995003 7.10e-01 100 chr15:70575523-70576023 7.42e-01 100 chr18:49655995-49656495 3.27e-02 34_[-3(1.29e-05)]_19_[-3(1.57e-05)]_\ 29 chr9:79256591-79257091 8.79e-01 100 chr19:28596479-28596979 3.16e-03 59_[+3(3.38e-06)]_32 chr12:65606270-65606770 6.42e-01 100 chr10:101485988-10148648 6.96e-01 100 chr20:45017806-45018306 5.51e-02 100 chr4:75179433-75179933 6.72e-01 100 chr1:107767195-107767695 2.00e-02 7_[-2(1.08e-05)]_81 chr13:87123853-87124353 1.90e-01 100 chr13:95289037-95289537 8.14e-01 100 chr1:41870101-41870601 4.67e-01 100 chr1:198837492-198837992 2.48e-02 13_[+2(3.42e-05)]_75 chr20:51934170-51934670 2.58e-01 100 chr10:72097731-72098231 1.20e-01 100 chr13:113493289-11349378 3.97e-02 39_[+2(4.83e-05)]_49 chr2:19667533-19668033 5.12e-02 100 chr4:185912727-185913227 2.33e-01 100 chr13:106096584-10609708 1.16e-01 100 chr20:50536242-50536742 4.01e-01 100 chr10:129440206-12944070 3.24e-01 100 chr9:86741427-86741927 6.21e-01 100 chr17:73575403-73575903 1.78e-01 100 chr21:35585875-35586375 1.58e-01 100 chr8:17674943-17675443 7.04e-02 100 chr15:58038597-58039097 2.40e-01 100 chr10:15704514-15705014 1.89e-01 100 chr21:36567184-36567684 1.40e-01 100 chr10:22912190-22912690 4.41e-01 100 chr6:43321903-43322403 1.51e-09 10_[-1(1.99e-12)]_41 chr6:24583872-24584372 8.16e-01 100 chr17:48577408-48577908 3.73e-01 100 chr14:29736298-29736798 2.24e-01 100 chr9:14096572-14097072 7.25e-01 100 chr14:91149463-91149963 1.26e-02 13_[-2(2.94e-05)]_75 chr1:80054122-80054622 9.14e-01 100 chr18:59484756-59485256 4.96e-03 55_[+3(1.57e-05)]_36 chr16:12120436-12120936 4.93e-02 35_[+2(7.52e-05)]_53 chr6:1839223-1839723 2.87e-01 100 chr6:123841208-123841708 2.87e-02 89_[-3(2.25e-05)]_2 chr10:12445537-12446037 1.59e-03 17_[+2(2.52e-05)]_71 chr7:51606687-51607187 3.90e-01 100 chr7:158097520-158098020 7.42e-01 100 chr3:194134843-194135343 7.35e-01 100 chr17:81583894-81584394 5.99e-01 100 chr20:20211411-20211911 9.10e-01 100 chr10:88181894-88182394 4.84e-02 1_[+2(1.25e-05)]_87 chr16:30570496-30570996 1.52e-21 24_[+1(3.42e-25)]_27 chr5:14156550-14157050 1.03e-01 71_[-3(8.86e-05)]_20 chr1:219273044-219273544 1.27e-01 100 chr9:16953996-16954496 2.67e-04 20_[+3(3.38e-06)]_71 chr1:233241765-233242265 1.83e-01 100 chr16:22232694-22233194 5.30e-03 67_[-3(3.38e-06)]_24 chr13:21043940-21044440 8.56e-03 63_[-3(8.16e-06)]_28 chr1:208747842-208748342 3.01e-02 27_[+2(2.10e-05)]_61 chr5:57042467-57042967 4.14e-01 100 chr22:40711465-40711965 1.48e-02 100 chrUn_KI270467v1:2000-25 8.95e-02 100 chr21:34845670-34846170 3.13e-01 100 chr7:22548262-22548762 1.02e-02 32_[+2(9.10e-05)]_56 chr10:75593192-75593692 1.25e-02 76_[+2(1.75e-05)]_12 chr10:85642731-85643231 9.29e-01 100 chr11:70483045-70483545 6.99e-01 100 chr3:71102096-71102596 7.69e-03 17_[-2(2.52e-05)]_71 chr6:149233306-149233806 8.35e-01 100 chr2:60633567-60634067 2.12e-02 35_[-3(5.36e-06)]_56 chr6:89144362-89144862 1.55e-01 100 chr11:116853587-11685408 8.04e-02 100 chr1:87718279-87718779 9.15e-03 38_[-3(2.73e-05)]_53 chr1:12478113-12478613 4.53e-01 100 chr10:63707202-63707702 7.61e-01 100 chr3:182697521-182698021 2.07e-01 100 chr10:72228276-72228776 3.65e-04 89_[+3(1.98e-06)]_2 chr16:324337-324837 7.76e-02 100 chr5:136375846-136376346 1.48e-01 100 chr10:102997868-10299836 2.31e-01 100 chr17:70661294-70661794 6.91e-02 100 chr3:168975011-168975511 7.58e-01 100 chr4:119730134-119730634 2.86e-02 9_[-2(7.56e-06)]_79 chrX:18938620-18939120 7.91e-01 100 chr6:11270217-11270717 4.07e-03 61_[-2(1.08e-05)]_27 chr9:14153321-14153821 8.10e-01 100 chr1:110647215-110647715 8.31e-01 100 chr4:70778937-70779437 4.53e-01 100 chr10:87586149-87586649 9.75e-01 100 chr7:81299211-81299711 3.14e-03 24_[+3(3.38e-06)]_67 chr4:110411670-110412170 5.71e-01 100 chr10:7302357-7302857 2.42e-01 100 chr15:36970491-36970991 1.18e-01 100 chr10:75294732-75295232 5.08e-01 100 chr3:61634650-61635150 8.11e-02 100 chr5:54302197-54302697 1.11e-02 57_[-2(2.10e-05)]_31 chr7:70098023-70098523 6.51e-01 100 chr3:77191644-77192144 1.46e-01 100 chr14:74140209-74140709 1.57e-01 100 chr17:50694074-50694574 2.16e-01 100 chr6:134109436-134109936 3.38e-01 100 chr21:33136827-33137327 3.78e-02 100 chr6:128066839-128067339 3.54e-05 65_[+3(1.98e-06)]_12_[+2(2.94e-05)]_\ 2 chr6:91299548-91300048 1.08e-02 100 chrUn_KI270467v1:2670-31 1.04e-01 100 chr6:39059620-39060120 2.56e-01 100 chr17:49976195-49976695 1.67e-01 100 chr5:14439319-14439819 7.68e-01 100 chr9:82923409-82923909 1.97e-01 34_[+3(7.71e-05)]_57 chr17:14622658-14623158 4.48e-01 100 chr1:17787550-17788050 1.14e-01 100 chr7:114418010-114418510 1.73e-01 100 chr9:1458392-1458892 6.83e-01 100 chr6:82072060-82072560 6.92e-03 100 chr17:60173303-60173803 5.54e-01 100 chr10:72800366-72800866 1.67e-02 82_[-2(7.56e-06)]_6 chr4:108941724-108942224 4.27e-01 100 chr20:20215869-20216369 1.46e-02 9_[-3(2.45e-05)]_82 chr22:24727032-24727532 1.96e-02 45_[+2(9.10e-05)]_43 chr8:27603165-27603665 1.65e-01 100 chr2:207683811-207684311 2.32e-01 100 chr17:44820578-44821078 5.18e-01 100 chr1:241460439-241460939 3.32e-01 100 chr3:169526186-169526686 9.22e-02 80_[+2(8.31e-05)]_8 chr18:44946499-44946999 4.88e-01 100 chr1:6404513-6405013 1.35e-17 1_[-1(3.93e-21)]_50 chr7:98476695-98477195 1.27e-01 100 chr6:150418319-150418819 6.26e-03 41_[+1(2.56e-05)]_10 chr12:806375-806875 1.39e-03 27_[+2(9.10e-06)]_61 chr10:36423717-36424217 1.34e-01 51_[+3(6.08e-05)]_40 chr1:68217000-68217500 1.02e-01 100 chr8:37392998-37393498 5.73e-02 100 chr5:136729911-136730411 5.01e-01 100 chr9:86732360-86732860 4.62e-01 100 chr2:191321783-191322283 1.00e-01 100 chr10:121310106-12131060 7.71e-01 100 chr5:119270066-119270566 3.49e-03 33_[-2(1.51e-05)]_55 chr9:135329983-135330483 6.24e-03 82_[+3(1.98e-06)]_9 chr5:125275307-125275807 1.86e-01 100 chr10:23408405-23408905 3.37e-01 100 chrUn_KI270466v1:188-688 1.89e-01 100 chr5:72246989-72247489 2.70e-01 100 chr5:136123154-136123654 2.75e-01 100 chr5:14580233-14580733 8.69e-01 100 chr5:88516295-88516795 2.89e-03 67_[-2(5.98e-06)]_21 chr20:53899425-53899925 1.11e-01 2_[-3(8.86e-05)]_89 chr1:198763245-198763745 7.85e-01 100 chr6:56529579-56530079 2.79e-10 23_[-1(6.73e-13)]_28 chr6:139152327-139152827 2.44e-01 100 chr5:125409101-125409601 7.07e-02 100 chr1:244347915-244348415 2.72e-01 100 chr6:21264311-21264811 9.35e-03 36_[+3(1.29e-05)]_55 chr9:95721050-95721550 4.85e-05 7_[-1(2.61e-06)]_44 chr4:185914645-185915145 2.09e-03 72_[+3(1.15e-05)]_19 chr10:11773687-11774187 1.76e-01 100 chr6:167829440-167829940 1.79e-03 37_[+2(2.52e-05)]_51 chr6:125050688-125051188 1.42e-02 50_[-2(2.10e-05)]_38 chr9:123678562-123679062 2.74e-01 100 chr6:100592916-100593416 1.15e-01 100 chr8:108689368-108689868 5.51e-02 85_[+2(3.42e-05)]_3 chr1:159916142-159916642 2.18e-02 17_[+2(1.25e-05)]_71 chr14:51581284-51581784 1.19e-03 68_[-2(1.06e-06)]_20 chr19:35881941-35882441 4.38e-20 22_[-1(5.64e-24)]_29 chr1:214520477-214520977 1.84e-01 100 chr17:3890061-3890561 5.20e-03 9_[+3(1.98e-06)]_82 chr4:20272369-20272869 1.05e-04 34_[+3(9.42e-05)]_6_[+1(1.34e-05)]_\ 2 chr7:116810322-116810822 6.41e-01 100 chr10:112793304-11279380 9.21e-03 64_[+2(1.75e-05)]_24 chr4:53943648-53944148 2.00e-02 41_[+3(8.16e-06)]_50 chr4:74202024-74202524 3.11e-01 100 chr6:52482906-52483406 1.64e-01 100 chr8:124077224-124077724 8.26e-01 100 chr8:29126517-29127017 1.37e-03 33_[+3(3.38e-06)]_58 chr2:156781572-156782072 3.95e-01 100 chr17:75105442-75105942 2.83e-02 100 chr1:16122829-16123329 8.80e-01 100 chr2:12303218-12303718 3.27e-03 63_[-2(7.56e-06)]_25 chr6:52243258-52243758 4.71e-02 10_[-2(2.10e-05)]_78 chr1:89719630-89720130 2.96e-01 100 chr7:70092355-70092855 6.68e-01 100 chr18:59455113-59455613 3.23e-01 100 chr9:1462599-1463099 2.71e-01 100 chr5:160008637-160009137 1.20e-23 13_[-1(1.51e-26)]_38 chr6:137853580-137854080 1.21e-01 100 chr10:77305597-77306097 9.64e-02 100 chr10:87845974-87846474 1.95e-01 100 chr6:124487972-124488472 5.42e-02 33_[+1(9.72e-05)]_18 chr9:86943415-86943915 1.80e-01 100 chr1:47690356-47690856 5.37e-01 100 chr20:35319244-35319744 2.52e-01 100 chr7:114653398-114653898 8.45e-01 100 chrX:24146292-24146792 1.35e-01 100 chr14:76486250-76486750 1.19e-01 100 chr7:70704760-70705260 1.02e-01 100 chr21:38990096-38990596 6.29e-02 100 chr8:99323787-99324287 4.19e-01 100 chr10:126233697-12623419 2.51e-02 84_[-2(9.10e-06)]_4 chr9:127388333-127388833 2.40e-01 100 chr11:110305460-11030596 6.32e-01 100 chr15:70494072-70494572 9.60e-01 100 chrX:38060422-38060922 9.72e-01 100 chr22:27212593-27213093 1.69e-01 100 chr6:38974761-38975261 8.44e-01 100 chr17:71438632-71439132 4.75e-01 100 chr4:147768088-147768588 7.41e-01 100 chr5:34182251-34182751 3.49e-22 22_[-1(3.54e-26)]_29 chr10:7433224-7433724 7.67e-05 28_[-2(2.94e-05)]_7_[+3(1.15e-05)]_\ 44 chr12:41288155-41288655 5.15e-01 100 chr2:55843194-55843694 6.42e-01 100 chr5:92552245-92552745 1.82e-01 100 chr15:66886245-66886745 5.01e-01 100 chr16:22728397-22728897 4.60e-01 100 chr18:50629032-50629532 1.07e-02 83_[-2(3.42e-05)]_5 chr1:167658652-167659152 4.51e-01 100 chr7:83267138-83267638 8.34e-04 22_[+1(1.06e-05)]_29 chr10:129440861-12944136 4.69e-01 100 chr10:132700570-13270107 4.34e-01 100 chr1:61091491-61091991 8.56e-01 100 chr13:46674981-46675481 4.36e-02 52_[-2(4.83e-05)]_36 chr4:118327839-118328339 6.74e-01 100 chr4:111883490-111883990 6.45e-04 21_[+3(1.15e-05)]_46_[+2(7.52e-05)]_\ 12 chr13:37046921-37047421 8.23e-03 100 chr1:11178267-11178767 2.95e-01 100 chr11:88320062-88320562 8.63e-04 57_[-2(9.10e-06)]_31 chr10:12720331-12720831 1.37e-02 55_[-2(3.40e-06)]_33 chr7:27165479-27165979 3.30e-01 100 chr10:129605969-12960646 7.19e-01 100 chr11:115476468-11547696 5.69e-01 100 chr21:29217784-29218284 1.89e-01 100 chr19:34218184-34218684 8.48e-03 100 chr6:115485321-115485821 5.72e-01 100 chr13:21949769-21950269 5.49e-01 100 chr5:174514895-174515395 1.37e-01 100 chr10:126249961-12625046 2.75e-02 27_[-2(9.89e-05)]_61 chr5:125485025-125485525 9.13e-01 100 chr11:32891506-32892006 6.39e-02 100 chr13:112346345-11234684 7.01e-01 100 chr18:42850138-42850638 2.72e-01 100 chr1:59077972-59078472 7.14e-01 100 chr1:3403704-3404204 2.63e-02 88_[+2(1.75e-05)] chr8:37359521-37360021 6.37e-02 10_[-3(2.73e-05)]_81 chrX:136057527-136058027 2.60e-01 100 chr17:61335987-61336487 3.31e-03 32_[+2(1.06e-06)]_56 chr10:22552784-22553284 3.06e-01 100 chr6:1667161-1667661 5.33e-02 84_[-2(9.10e-05)]_4 chr3:138833420-138833920 6.74e-01 100 chr8:37637880-37638380 7.55e-01 100 chr5:124655900-124656400 4.87e-01 100 chr5:94469761-94470261 7.04e-01 100 chr3:190972921-190973421 3.78e-02 100 chr1:201721118-201721618 9.75e-02 69_[-2(9.10e-05)]_19 chr1:59214665-59215165 3.32e-02 8_[-2(9.10e-05)]_80 chr12:54033461-54033961 9.99e-01 100 chr2:46481488-46481988 6.63e-02 100 chr8:37547855-37548355 2.28e-01 100 chr5:124734986-124735486 9.94e-01 100 chr1:228781066-228781566 4.03e-01 100 chr6:137665268-137665768 7.90e-01 100 chrX:38061242-38061742 6.36e-01 100 chr8:37479291-37479791 8.91e-01 100 chr18:23684577-23685077 3.91e-02 42_[-2(9.89e-05)]_46 chr7:33669144-33669644 1.26e-01 57_[-2(7.52e-05)]_31 chr15:69143642-69144142 8.60e-03 41_[+2(2.10e-05)]_47 chr7:80876791-80877291 3.00e-01 100 chr12:54052075-54052575 1.41e-03 77_[-2(8.31e-05)]_11 chr2:31008532-31009032 1.96e-01 100 chr10:44752840-44753340 2.64e-01 100 chr10:75613678-75614178 7.32e-01 100 chr5:17305870-17306370 7.82e-02 100 chr5:74632108-74632608 9.07e-02 47_[+2(9.10e-05)]_41 chr10:50463970-50464470 3.45e-02 11_[-2(2.52e-05)]_77 chr1:229221437-229221937 1.19e-02 6_[-2(5.98e-06)]_82 chr5:6419268-6419768 2.05e-02 6_[-1(4.42e-05)]_45 chr15:59953466-59953966 2.24e-01 100 chr7:116218110-116218610 4.45e-02 100 chr4:80307274-80307774 1.39e-02 57_[+3(8.16e-06)]_34 chr6:2028605-2029105 2.32e-01 100 chr3:16482918-16483418 1.79e-06 17_[-3(4.79e-05)]_43_[-2(1.06e-06)]_\ 19 chr1:81126876-81127376 9.37e-01 100 chr3:42819882-42820382 4.01e-01 100 chr6:4320850-4321350 1.02e-02 18_[+2(1.08e-05)]_70 chr8:28445242-28445742 6.73e-01 100 chr1:8439096-8439596 4.48e-01 100 chr4:110904623-110905123 8.39e-04 53_[-3(3.38e-06)]_38 chr12:114914221-11491472 8.28e-02 100 chr9:18976681-18977181 1.09e-01 100 chr6:143755252-143755752 2.36e-01 100 chr19:33293248-33293748 5.05e-01 100 chr7:135716570-135717070 3.03e-01 100 chr1:215581871-215582371 3.90e-02 41_[+1(5.03e-05)]_10 chr15:67792459-67792959 2.43e-01 100 chr16:25049563-25050063 5.85e-01 100 chr5:175378372-175378872 3.79e-01 100 chr14:32134446-32134946 2.04e-01 100 chr7:133492178-133492678 2.18e-02 30_[+1(1.34e-05)]_21 chr8:109611165-109611665 4.41e-02 71_[-2(9.89e-05)]_17 chr8:71355233-71355733 1.74e-02 43_[+2(4.51e-06)]_45 chr6:168147142-168147642 1.52e-02 100 chr16:15590842-15591342 2.15e-02 52_[-2(4.51e-06)]_36 chr3:194350325-194350825 1.15e-01 100 chr9:85743168-85743668 1.74e-01 100 chr10:75379151-75379651 6.97e-01 100 chr1:81032869-81033369 4.39e-01 100 chr3:17730413-17730913 9.33e-03 100 chr14:99821632-99822132 5.41e-02 100 chr5:69521066-69521566 7.61e-02 100 chr8:25998475-25998975 2.02e-02 41_[+2(6.73e-05)]_47 chr20:53609851-53610351 7.95e-01 100 chr16:1271751-1272251 4.66e-01 100 chr1:80403329-80403829 9.34e-01 100 chr1:86774466-86774966 6.83e-02 100 chr19:40920945-40921445 2.28e-02 38_[-2(9.10e-05)]_50 chr14:36835059-36835559 7.81e-01 100 chr10:72204287-72204787 9.52e-01 100 chr10:77287666-77288166 1.57e-01 100 chr17:34981743-34982243 2.98e-01 100 chr8:37360450-37360950 1.50e-01 100 chr3:181328985-181329485 7.97e-01 100 chr1:85274861-85275361 9.22e-01 100 chr5:124740931-124741431 5.76e-01 100 chr5:59303262-59303762 7.25e-01 100 chr8:37302614-37303114 4.73e-01 100 chr6:82260170-82260670 2.47e-01 100 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (3) found. ******************************************************************************** CPU: indra ********************************************************************************