Database and Motifs High-scoring Motif Occurences Debugging Information



FIMO - Motif search tool

FIMO version 4.12.0, (Release date: Tue Jun 27 16:22:50 2017 -0700)

For further information on how to interpret these results or to get a copy of the FIMO software please access http://meme.nbcr.net

If you use FIMO in your research, please cite the following paper:
Charles E. Grant, Timothy L. Bailey, and William Stafford Noble, "FIMO: Scanning for occurrences of a given motif", Bioinformatics, 27(7):1017-1018, 2011. [full text]


DATABASE AND MOTIFS

DATABASE /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/GLI2.IDR0.05.filt.narrowPeak.outsidePolsteinDNase.summitPlusMinus250bp.MemeChipResults/GLI2.IDR0.05.filt.narrowPeak.outsidePolsteinDNase.summitPlusMinus250bp.fa
Database contains 599 sequences, 299500 residues

MOTIFS /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/MotifData/motif_databases/CIS-BP/Homo_sapiens.meme (DNA)

MOTIF WIDTH BEST POSSIBLE MATCH
M0085_1.02 10 TTGCCTGAGG
M0104_1.02 11 ATATTAATTAA
M0105_1.02 9 TTTTAATTG
M0108_1.02 11 GATAATATTGA
M0177_1.02 10 ACCATATGTT
M0178_1.02 10 AACAGCTGTT
M0189_1.02 8 GCACGTGA
M0195_1.02 10 ACCATATGGT
M0196_1.02 10 GGCACGTGTA
M0198_1.02 10 AGCCCGTGCG
M0199_1.02 13 TAACGACACGTGC
M0211_1.02 8 GCACGTGT
M0212_1.02 10 GGCACGTGCC
M0214_1.02 9 AACATATGT
M0216_1.02 10 CGCAGCTGTG
M0217_1.02 10 ACCATATGGT
M0300_1.02 10 AATGACGTCA
M0305_1.02 9 GCCACGTGT
M0307_1.02 8 ATACGTTT
M0395_1.02 8 GTACTAAT
M0396_1.02 10 AACGGTAGCA
M0398_1.02 11 AGGAAGTGCAA
M0404_1.02 10 AAGGGGGGCA
M0405_1.02 10 TGGGCGTGGC
M0408_1.02 10 ATGTGCACAT
M0413_1.02 10 GTTGCGGGAT
M0415_1.02 8 ATAACGGT
M0422_1.02 10 CCGGGGGGTC
M0424_1.02 10 TTTGACAGCT
M0428_1.02 8 AGGAGCAC
M0431_1.02 9 ACGGTAGCA
M0432_1.02 9 CGCGCGCAC
M0433_1.02 10 ATCTAGAACA
M0436_1.02 10 TTGTTTATTG
M0437_1.02 9 TATATATAT
M0442_1.02 9 AATGCAGTG
M0443_1.02 10 TGGGCGTGGC
M0594_1.02 9 ATTTGAATT
M0603_1.02 7 TTAGCGG
M0607_1.02 9 TCGTAAATA
M0608_1.02 10 GGGGGCGTAA
M0609_1.02 10 TCCCGCTGCC
M0610_1.02 9 ATCGCGTTA
M0629_1.02 11 AATGTATCAAT
M0630_1.02 10 AATGTATCAA
M0632_1.02 10 AATGTATCAA
M0633_1.02 10 TAATGTATTA
M0635_1.02 13 AACATGTATAAAA
M0714_1.02 10 AACCGGAAGT
M0718_1.02 10 ATGTAAACAA
M0719_1.02 8 GTAAACAA
M0728_1.02 12 AATAAACAAACA
M0736_1.02 8 GTAAACAA
M0737_1.02 10 TATGTAAACA
M0747_1.02 10 AATGTAAACA
M0756_1.02 9 GTAAACAAA
M0887_1.02 9 CCTAATGAG
M0890_1.02 8 GTAATCAA
M0891_1.02 10 TTAATTGGTT
M0892_1.02 10 CCTAATTACC
M0893_1.02 10 ATTAATTAAT
M0894_1.02 8 TTAATTAG
M0896_1.02 8 TTAATTAG
M0897_1.02 10 TTTTATTGGC
M0898_1.02 8 TTACGTAA
M0900_1.02 8 TTAATTAG
M0901_1.02 8 CTTGTCAA
M0905_1.02 9 TTAATTACC
M0906_1.02 10 AATTAATTAG
M0931_1.02 9 TAATTAATT
M0937_1.02 7 TGATACC
M0942_1.02 8 TTGTAATT
M0943_1.02 8 GCTAATTA
M0949_1.02 7 TTAATGA
M0952_1.02 8 TGATACCC
M0958_1.02 7 CTAATTA
M0961_1.02 9 CTAATTGGT
M0969_1.02 9 CTAATCAGC
M0975_1.02 9 TAATTAATT
M0994_1.02 9 ATGATACCC
M0996_1.02 7 GAAATCA
M0999_1.02 9 ATTAATTAC
M1007_1.02 9 TTTATGACC
M1012_1.02 9 TTAATGACT
M1016_1.02 7 GTGATAC
M1018_1.02 7 TAATTAA
M1025_1.02 8 ACTAATTA
M1027_1.02 9 TTAATTACC
M1030_1.02 9 ACCACTTAA
M1034_1.02 7 GCAATTA
M1039_1.02 9 GCTAATTGG
M1049_1.02 10 ATGATACCCC
M1070_1.02 9 TTAATGACT
M1071_1.02 8 TTAATGAC
M1073_1.02 9 TTAATGACC
M1110_1.02 10 GAGCAATAGA
M1125_1.02 10 GCTAATTGGT
M1157_1.02 10 TTTTATGACC
M1163_1.02 9 ATTAATTAC
M1266_1.02 10 GACCGAAACC
M1281_1.02 9 CTTACGCAA
M1358_1.02 9 TAACCCTAG
M1359_1.02 10 TTTTGCGCCA
M1418_1.02 8 TGGTACCA
M1432_1.02 10 ATTGACCTCT
M1458_1.02 10 ATTGACCTCG
M1507_1.02 10 AATTTTGGCT
M1528_1.02 10 CCATGGCAAC
M1529_1.02 10 CCATAGCAAC
M1545_1.02 9 CGTACGTCA
M1581_1.02 10 TTTGCTGACT
M1582_1.02 11 ATATATAATAA
M1583_1.02 8 TTCATTGA
M1589_1.02 10 ACAGAACAAT
M1592_1.02 8 AAAACAAT
M1594_1.02 10 TATTGTTTTT
M1601_1.02 9 ATTGTTTTC
M1605_1.02 10 ATTCATCTTT
M1628_1.02 11 AGGTGTGAAAA
M1668_1.02 12 TCCAAACGAGAT
M1838_1.02 15 CATTGCCTCAGGGCA
M1841_1.02 15 GAACATTCTGTTCTT
M1863_1.02 8 GTAAACAT
M1868_1.02 14 ACAGATAAGAATCT
M1871_1.02 10 TGGGTGGGGC
M1882_1.02 21 AAAGTGAAAGTGAAAGTAAAA
M1884_1.02 15 AGCTAAAAATAGCAT
M1889_1.02 10 AAGCACATGG
M1890_1.02 18 AGAGTGCTGATTGGTCCA
M1906_1.02 11 GGGGGCGGGGC
M1915_1.02 20 GCAAGGCATTATGGGAAATC
M1917_1.02 11 GGTCACGTGGC
M1919_1.02 12 CAAGATGGCGGC
M1925_1.02 11 TATTGTGCAAT
M1926_1.02 9 CAGGTGAGG
M1927_1.02 8 GCCACGTG
M1928_1.02 11 GGGAATTTCCC
M1929_1.02 15 CATGTCTGGGCATGT
M1934_1.02 20 AGGTCAGGGTGACCTGGGCC
M1950_1.02 6 GTGGAT
M1955_1.02 11 TTTCCAGGAAA
M1963_1.02 14 GGGGCCGAGGCCTG
M1968_1.02 11 TCCCTGGGGAC
M1970_1.02 6 TGCCAA
M2065_1.02 15 AGGTCAGGGTGACCT
M2264_1.02 8 GCCATCTG
M2267_1.02 11 TTTTATGGCTT
M2268_1.02 11 TATTGCACAAT
M2270_1.02 11 TAATTTAATCA
M2273_1.02 11 GGGCGGGAAGG
M2275_1.02 13 GAACCAGGAAGTG
M2277_1.02 11 ACAGGAAGTGG
M2278_1.02 11 TGTGACTCATT
M2281_1.02 11 TCCAATCCACA
M2283_1.02 15 CAAAAGTAAACAAAG
M2286_1.02 15 TGGACTTTGAACTCT
M2287_1.02 13 GGCCATAAATCAC
M2289_1.02 13 AAGATGATGTCAT
M2292_1.02 11 GGTGACTCATC
M2296_1.02 15 CTGAGTCAGCAATTT
M2299_1.02 13 AGGGACAGCTGCA
M2301_1.02 15 AAATGGACCAATCAG
M2303_1.02 15 TGACCTCTGACCTCT
M2305_1.02 11 TGCGCAGGCGC
M2306_1.02 13 TTCATTTGCATAT
M2307_1.02 15 AGAAAGTGAAAGTGA
M2310_1.02 15 CAAACCACAAACCCC
M2313_1.02 10 CCATTGTTTT
M2314_1.02 15 GGGAGGGGGCGGGGC
M2319_1.02 14 TTCCTTTGATCTTT
M2321_1.02 20 AGACATGCCCAGACATGCCC
M2323_1.02 15 CAGATCTCGCGAGAG
M2385_1.02 11 AAGTAAACAAA
M2387_1.02 10 GTGGGGTGAT
M2388_1.02 10 ATGGGGTGAT
M2390_1.02 8 CAGGAAGG
M2391_1.02 10 GGGGTGGGGC
M2392_1.02 19 GTTGCCATGGCAACCGCGG
M4344_1.02 8 GGTTGCTA
M4427_1.02 21 GTGGCCACCAGGGGGCGCTGT
M4428_1.02 14 AGAACATTCTGTTC
M4438_1.02 15 AGGTCATGGTGACCT
M4444_1.02 14 AGGGGATTTCCCAG
M4451_1.02 11 GGTCACGTGAC
M4452_1.02 15 TCTCGATATGACTCA
M4453_1.02 15 AAGAGGAAGTGAAAC
M4454_1.02 15 AAATCTCGCGAGAAC
M4459_1.02 20 GTGCGGGGGCGGGGGGGGGG
M4461_1.02 21 GCCTTCTGGGAATTGTAGTTC
M4462_1.02 11 CACCGGAAGTG
M4463_1.02 18 AATGTGGAAATGAGTCAG
M4467_1.02 15 ATGCCAAAAATAGCA
M4469_1.02 14 TCCATGGTGCTGAA
M4471_1.02 15 GCAGCCAAGCGTGAC
M4473_1.02 15 GCCGGCCAATCAGAG
M4476_1.02 15 TCATCTGTTGCTAGG
M4477_1.02 19 CTATGGCCATATAAGGCAA
M4478_1.02 20 CAGGTGATTTCCGGGAAATG
M4479_1.02 11 GCAGCAGCTGT
M4481_1.02 15 GGTCACGTGGCCCGG
M4484_1.02 15 CTGGGAATTGTAGTC
M4509_1.02 17 ATTTGCATAACAAAGGA
M4511_1.02 8 TGACCTCT
M4522_1.02 10 CCGGAAGTGG
M4525_1.02 15 AGCCTCAGGGCATGG
M4526_1.02 15 GGGGGGTGACTCATC
M4527_1.02 21 GGACTACAACTCCCAGCAGGC
M4532_1.02 10 CCACGTGCTC
M4536_1.02 15 GGGGAGGGCGCGCGG
M4537_1.02 15 GGCGGGAAATTTGAA
M4543_1.02 11 GGAACCACGTG
M4545_1.02 15 AGAAAGTGAAAGTGA
M4551_1.02 17 TTCATACTGGAGAGAAA
M4553_1.02 10 GGTCACGTGC
M4565_1.02 14 CAGGATGAGTCACC
M4567_1.02 15 GCAAAGTAAACATAG
M4569_1.02 18 GTCCCGGGTTCGAATCCC
M4572_1.02 15 TGCTGACTCAGCAAA
M4600_1.02 11 GCAGATAAGGA
M4604_1.02 21 GGGGAGGAGGGAGGGGAGGAG
M4612_1.02 15 CCGCCAGGGGGCGCC
M4619_1.02 11 GGGTGACTCAT
M4623_1.02 15 CGGTGACTCATCCTT
M4629_1.02 17 CATGACTCAGCAATTTT
M4635_1.02 15 GAAAATGAAACTGAA
M4636_1.02 21 CTGCCCTCATCAAAGATGGCG
M4640_1.02 15 GGGCAGGGGTCTCGG
M4665_1.02 15 CAGATAAGAATCTGT
M4680_1.02 8 GTCACGTG
M4681_1.02 10 TGCTGAGTCA
M4692_1.02 10 ACTACAACTC
M4698_1.02 15 CTGGACTTTGGACTC
M4702_1.02 8 TGACCTTT
M4708_1.02 10 TATGCAAATA
M4840_1.02 11 AAATGAGCAAC
M4850_1.02 21 TGTTGTGTCCGTGCCATCTGG
M4930_1.02 11 AAATCGTGACT
M4971_1.02 10 GTAACAGCTG
M5116_1.02 9 ACCACCTGT
M5209_1.02 11 GTGGGCGTGGC
M5234_1.02 10 GGTCACGTAC
M5284_1.02 10 GCTAATTAGC
M5287_1.02 13 CTAATTAAATTAA
M5291_1.02 13 TTAATTTAATTAA
M5292_1.02 13 GGATGATGCAATA
M5293_1.02 14 CGATGACGTCATCG
M5294_1.02 10 GTTAAACGGT
M5300_1.02 17 TAATCGGTATTTAATTG
M5302_1.02 14 TGATGACGTCATCA
M5303_1.02 17 TGCTTTCTAGGAATTCA
M5304_1.02 10 ACCATATGGT
M5307_1.02 12 AAACATATGTTT
M5308_1.02 10 ACCATATGTT
M5310_1.02 8 TTAATTGG
M5320_1.02 15 CCCGCATACAACGAA
M5321_1.02 10 AACACGTGTT
M5322_1.02 8 TTTTTATT
M5323_1.02 14 TGATGACGTCATCG
M5325_1.02 14 TGATGACGTGGCAT
M5335_1.02 18 ATCGATAATTTTATCGAT
M5339_1.02 10 GATAATTAGG
M5342_1.02 8 GTAATTGG
M5343_1.02 8 ATAATTAC
M5344_1.02 8 GTAATTGG
M5345_1.02 10 GTTAATCCGC
M5346_1.02 10 GCTAATCCGT
M5348_1.02 13 CTAATCTAATTAA
M5349_1.02 13 CTAATTTAATCAA
M5363_1.02 12 TTTCCCGCCAAA
M5377_1.02 12 AACCCGGAAGTG
M5388_1.02 10 GCTAATTAGC
M5390_1.02 10 GCTAATTGGG
M5394_1.02 10 GTTAATTAGA
M5398_1.02 10 ACCGGAAGTG
M5414_1.02 10 GTTAATTGGT
M5420_1.02 10 ACCGGAAGTA
M5421_1.02 11 AACCGGAAATA
M5422_1.02 10 ACCGGAAGTG
M5425_1.02 15 CCGGAAGCGGAAGTG
M5427_1.02 10 GCTAATTACC
M5428_1.02 10 GCTAATTACC
M5430_1.02 10 AACACCTGTT
M5435_1.02 14 TCGCTGTGTCATTC
M5445_1.02 14 AGTAAATATTTTTT
M5446_1.02 7 GTAAACA
M5460_1.02 7 GTAAACA
M5471_1.02 14 GTAAACATGTTTAC
M5480_1.02 10 GCTAATTAGT
M5481_1.02 10 GCTAATTGGT
M5487_1.02 10 TATGCGGGTA
M5490_1.02 16 GCTTCGTGGGGGGTCT
M5491_1.02 14 CTTCGCGGGGGGTC
M5493_1.02 8 GTACGTAA
M5497_1.02 17 AACCGGTTTAACCGGTT
M5500_1.02 10 GCTAATCCCT
M5501_1.02 10 CCTAATCCGC
M5502_1.02 10 TTTAATTAGG
M5503_1.02 10 TTTAATTAGT
M5504_1.02 12 TGGCACGTGCCG
M5506_1.02 12 TGGCACGTGCCA
M5509_1.02 10 GGCACGTGTC
M5512_1.02 9 GGTGGGCAT
M5517_1.02 10 ACTAGTTAAC
M5518_1.02 11 TTTTAATTGCT
M5519_1.02 11 TTTTAATTGGT
M5520_1.02 11 TGTTAATTGCT
M5530_1.02 12 TATAATCGTTTT
M5541_1.02 10 GTTAATTACT
M5542_1.02 10 GCTAATTAGT
M5543_1.02 10 TTTAATTATT
M5544_1.02 10 TTTTTATGGG
M5547_1.02 11 GGTCGTAAAAT
M5551_1.02 9 TTTTATTAC
M5553_1.02 10 CCAATAAAAA
M5555_1.02 10 GTCGTAAAAA
M5557_1.02 9 GTAATAAAA
M5563_1.02 10 GCTAATTAAC
M5567_1.02 13 GAACGTTCTAGAA
M5568_1.02 15 TTCGAAACGTTCGAA
M5571_1.02 10 GACAGGTGTA
M5581_1.02 12 CATGTCATGTAA
M5582_1.02 12 CATGTCATGTAA
M5583_1.02 8 TTAAGTGC
M5584_1.02 13 TTAATCTAATTAA
M5587_1.02 9 ATGACTCAT
M5591_1.02 18 CAAAAAGGGGCGTGGCAT
M5592_1.02 14 AAGGGGGCGTGGCC
M5593_1.02 11 GGGGGCGTGGC
M5594_1.02 13 CTCGACCTAATTA
M5602_1.02 8 TTAATTGG
M5604_1.02 8 TTAATTAA
M5605_1.02 8 TTAATTAA
M5616_1.02 12 GCTATAAATAGC
M5621_1.02 8 CCTGTCAA
M5623_1.02 10 GCTAATTAAC
M5624_1.02 10 AGTAATTAAC
M5627_1.02 10 CACAGGTGTT
M5628_1.02 8 AGGTGTGA
M5631_1.02 10 GTTAATTAGA
M5632_1.02 10 ATCACGTGAT
M5634_1.02 10 ACCACGTGCC
M5635_1.02 10 TTTAATTACT
M5636_1.02 10 AACAGCTGTT
M5637_1.02 18 TAATTGGTTTTTAATTGC
M5643_1.02 12 ACCGTTAAACGG
M5652_1.02 10 GCCATATGGT
M5653_1.02 10 GACATATGTT
M5660_1.02 15 TTGGCACGGTGCCAA
M5662_1.02 15 TTGGCACAGTGCCAG
M5664_1.02 15 TTGGCACCGTGCCAA
M5672_1.02 10 GCTAATTAGC
M5689_1.02 11 AATTTGCTGAC
M5690_1.02 10 AACATATGTT
M5691_1.02 10 ACCATATGTT
M5693_1.02 10 ACCATATGTT
M5697_1.02 14 ATTATTGATTTTTT
M5702_1.02 17 TGCAGTCATGCGTGACG
M5704_1.02 10 TAATCGATTA
M5705_1.02 8 CTAATTAG
M5709_1.02 10 TAATCGATTA
M5711_1.02 17 TGCAGTCATGCGTGACG
M5714_1.02 11 TAATTTAATTA
M5715_1.02 11 TAATTTAATTA
M5717_1.02 9 CTTAATCCC
M5720_1.02 9 CTTAATCCC
M5722_1.02 12 TGACACCTGTCA
M5729_1.02 9 ATTTGCATA
M5735_1.02 13 AAATTAGCATAAT
M5738_1.02 9 ATTTGCATA
M5740_1.02 14 ATGAATAATTAATG
M5743_1.02 16 ATGCATAATTAATGAG
M5744_1.02 9 ATTTGCATA
M5746_1.02 10 ATAATGAGCT
M5750_1.02 13 GGGGGCCTTGAAA
M5753_1.02 12 CAAGACGTCTTA
M5771_1.02 10 GTTAATTGGC
M5772_1.02 8 TTAATTAG
M5777_1.02 16 CGTTGCCATGGCAACG
M5782_1.02 9 GGATAATCC
M5804_1.02 15 GAGCAACAGGTGGTT
M5805_1.02 13 ATGCAACAGGTGG
M5807_1.02 8 TTAATTGG
M5815_1.02 12 ACAATAACATTG
M5825_1.02 15 AACACTACCATTGTT
M5835_1.02 16 AACAATGTTCATTGTT
M5838_1.02 16 AACAATGTGCAGTGTT
M5856_1.02 12 AGTGGGCGTGGC
M5857_1.02 11 ACCCGGATGTA
M5865_1.02 14 AAAAAGAGGAAGTA
M5873_1.02 10 AGGTGTGAAA
M5875_1.02 20 AGGTGTGAAAAAAGGTGTGA
M5880_1.02 19 AGGTGTGAAATTCACACCT
M5882_1.02 20 TTTCACACCTAGGTGTGAAA
M5883_1.02 16 TCACACCTTCACACCT
M5889_1.02 16 GGTGTGAATTCACACC
M5896_1.02 8 AGGTGTGA
M5903_1.02 12 AAAGATCAAAGG
M5932_1.02 10 GTCACGTGAT
M5934_1.02 12 TGACAGCTGTCA
M5935_1.02 12 TGACAGCTGTCA
M5941_1.02 13 CTAATTTAATTAG
M5944_1.02 8 CTAATTAC
M5945_1.02 8 CTAATTAC
M5949_1.02 8 CTAATTAT
M5955_1.02 11 TAATGGCGGAC
M5958_1.02 13 TATGTCGCGATAG
M5959_1.02 17 TTTCGCCTGGCACGTCA
M5962_1.02 12 TTCGGTGGTCGC
M5965_1.02 15 GCACAGCGGGGGGTC
M5967_1.02 19 ATGTTAAATGTAGATTAAG
M5970_1.02 17 GTCGTGTTGTGGGAAAG
M5971_1.02 14 TCGAGGCTAGACCA
M5972_1.02 17 GAGTATTATGGGATGGA
M5973_1.02 18 AGGTGTTCTGTTAACACT
M5974_1.02 12 GGGTTCGAGGGT
M5976_1.02 17 TTCGTGGCATTTTTCTA
M5977_1.02 10 GTGGGGGGGG
M5979_1.02 12 TGTGGGAAAAGC
M5980_1.02 10 AGGTAGGTAC
M5981_1.02 15 TTTTCAGTGTGTGCA
M5998_1.02 12 GATGACGTCATT
M6037_1.02 12 TTTGTCATGTAG
M6111_1.02 13 AGAAAGGGTTAAT
M6114_1.02 10 AAAGCAAACA
M6115_1.02 15 CATGTCTGGGCATGT
M6119_1.02 15 AAAAAGAGGAAGTGG
M6123_1.02 15 GGGGTGGGGGAGGGG
M6131_1.02 21 CCGGTTCAAACCGGTTCTGGC
M6139_1.02 9 GCACGCAAC
M6140_1.02 18 ATTGGTTTTATTGGTTAA
M6141_1.02 12 TAATTCAATTAT
M6144_1.02 10 GCCCCCGGGC
M6146_1.02 14 ACGCGCCTCGGGCG
M6147_1.02 22 TTTAATTTGATTTCGATTAATT
M6149_1.02 13 TGTTAGTATTGTG
M6150_1.02 12 GCCTCCCACGCC
M6151_1.02 8 TCACGTGC
M6152_1.02 10 GTGACGTCAC
M6154_1.02 12 TAAGGAAGAAGG
M6155_1.02 12 GTGGTGACGTGG
M6157_1.02 10 TTATTAATTG
M6159_1.02 16 TTCCTAGAAAGCTTTT
M6161_1.02 20 ACCGGGTCACGTGCAGAAGG
M6162_1.02 14 GGGTCACGTGTCCA
M6163_1.02 12 TTTGTTGTTTTC
M6164_1.02 25 ACATAGTGACACCTAGGTGTGAAAT
M6166_1.02 15 ATTATGTTAAATCAC
M6167_1.02 8 ACATAAAT
M6171_1.02 11 AATTGTGCAAT
M6172_1.02 12 AAGATTGCGCAA
M6173_1.02 13 CAGATTGCAAAAT
M6174_1.02 11 AGCCAATCAGC
M6176_1.02 12 TGACCTTTGACC
M6180_1.02 9 GTGACGTCA
M6181_1.02 11 CACTGACGTCA
M6182_1.02 8 CTAATCCC
M6184_1.02 14 AGGGGGATCGATGG
M6185_1.02 7 CGTTGGC
M6186_1.02 11 TGTTACATAAC
M6187_1.02 13 GGGGATTGCATTT
M6188_1.02 8 ATAATTAT
M6189_1.02 10 GATAATTACA
M6191_1.02 10 GGCGCGAAAC
M6192_1.02 10 CGCGCGAAAC
M6194_1.02 10 CGCGCCAAAC
M6196_1.02 13 TAAGGCGCGAAAA
M6197_1.02 9 CGTGACGTC
M6199_1.02 11 GGCGTGGGCGG
M6200_1.02 11 AGAGTGGGTGT
M6201_1.02 11 GGCGGCAGGGC
M6204_1.02 15 TAGCAGGAAGTGAGT
M6205_1.02 14 GGCAAACAGGAAAT
M6206_1.02 11 ATAAGGAAGTA
M6207_1.02 9 ACCGGAAGT
M6208_1.02 12 CCCAGGAAGTGC
M6210_1.02 13 TGCCCACGTGGTG
M6211_1.02 14 CGGGGATACGAAAT
M6212_1.02 13 CCCACGTACTCAC
M6213_1.02 11 ACCGGAAATCC
M6215_1.02 9 TGACCTTGA
M6216_1.02 9 TGACCTTGA
M6221_1.02 11 GCGGGAAGTGG
M6222_1.02 8 CAGGAAGT
M6223_1.02 13 GACAGGAAGTAAC
M6224_1.02 17 GCCACAGGAAGTAACAC
M6225_1.02 16 AAGATAAGATAAGATA
M6226_1.02 10 CAGGAAATAA
M6228_1.02 10 CTGACTCATC
M6234_1.02 13 GCAAAGCAAACAA
M6235_1.02 15 CTTAAGTAAACAATG
M6236_1.02 15 TCTGGCAAAACAAAC
M6237_1.02 9 AAACAAACA
M6238_1.02 11 AAAATAAACAT
M6239_1.02 11 AAAAGTAAACA
M6240_1.02 12 AACCAATCAGAG
M6241_1.02 10 TAAATAAACA
M6242_1.02 13 TAAACAAAAACAA
M6244_1.02 13 AAAAACAAACAAC
M6245_1.02 16 AAAAAGTAAACAAACT
M6246_1.02 13 AGGTAAACAAACA
M6247_1.02 9 AATAAACAA
M6249_1.02 9 AAACAAATT
M6250_1.02 12 AAATAAACAATT
M6251_1.02 12 TTGTGTTTTTTT
M6256_1.02 9 ACAGATAAC
M6257_1.02 17 TAAGAGATAACTTAGAT
M6258_1.02 7 AAGATAA
M6259_1.02 14 CACATGCGGGTATT
M6262_1.02 11 TGCAGTGATTT
M6263_1.02 10 GCTGTGATTT
M6264_1.02 11 CTGGGTGGTCT
M6265_1.02 11 GTGGGTGGTCT
M6266_1.02 11 TTGGGTGGTCC
M6267_1.02 10 GTGGGGGGTA
M6268_1.02 12 AATGCCAGACGC
M6269_1.02 9 ATTCATTGA
M6270_1.02 20 AGGGACGCAGCTGCTCCCCA
M6271_1.02 13 GGGCTCGTGGCGG
M6272_1.02 16 AGGCCACGTGCCGGAT
M6273_1.02 17 GGGGGCACGTGGCATTA
M6274_1.02 9 GGGTTGCCC
M6275_1.02 12 GCGTACGTGCGG
M6276_1.02 16 GCGCTAGCGGACGTTA
M6277_1.02 13 CTGTTACATAATC
M6278_1.02 12 TAGGGCTGCAAA
M6279_1.02 7 AAAATAC
M6280_1.02 15 AATAATCGCGAATAT
M6281_1.02 15 GGTTAATTATTAACC
M6282_1.02 14 GTTAATCATTAACC
M6285_1.02 14 TTTATTGATTTTTT
M6287_1.02 14 AGAATGTTCTAGAA
M6289_1.02 12 TCATAAATTATC
M6290_1.02 11 CCAATAAAACC
M6291_1.02 10 CATCCATCAA
M6292_1.02 10 CATTAATCAA
M6293_1.02 15 TCCAATCTATTGATT
M6295_1.02 10 CCATCCATCA
M6296_1.02 13 TTCATCAATCATT
M6297_1.02 10 CATTAATCAA
M6298_1.02 11 GCATTAATCAA
M6299_1.02 15 AAAGTAATAAATCAT
M6300_1.02 14 GGGCATCAATCAAA
M6301_1.02 10 AATTAAAGCA
M6302_1.02 11 TCCCTAATAAA
M6303_1.02 8 TTAATTGA
M6304_1.02 10 TAATTAAATT
M6306_1.02 12 TGTCAGGGGGCA
M6308_1.02 14 GGAAAGTGAAAGCA
M6309_1.02 17 GGAAAGCGAAACTGAAA
M6311_1.02 20 TAAAGGAAAGCCAAAAGTGA
M6312_1.02 10 GAAAGTGAAA
M6313_1.02 15 GAGAAAGTGAAACTG
M6314_1.02 12 GAAAGCGAAACT
M6315_1.02 7 GTTAATG
M6316_1.02 9 CCAGGTGCA
M6321_1.02 17 GGCGGGGAGGTGGGGGC
M6322_1.02 11 CAGGGTGTGGC
M6323_1.02 15 TGCCTGGGTGTGGCT
M6324_1.02 10 TGGGTGGGGC
M6325_1.02 8 GGGGGCGG
M6326_1.02 9 CAGGGGGTG
M6327_1.02 7 CTTTGAT
M6328_1.02 13 CACTTTTAATTAG
M6329_1.02 13 AAAATTAATTAAT
M6330_1.02 21 GTGCTGACCCCGCAGCCTTCG
M6331_1.02 9 TGCTGACGG
M6332_1.02 8 TTGCTGAC
M6333_1.02 7 CATGACT
M6336_1.02 17 GGGGGGGGGAGGGAGGG
M6337_1.02 11 GGGGCCGGAGG
M6338_1.02 17 TACAACAACCTGTTCTT
M6339_1.02 7 CTCCGGG
M6342_1.02 12 GCTAAAAATAGC
M6343_1.02 13 CATAAAACTGTCA
M6344_1.02 13 TGACAGCTGTCAA
M6345_1.02 10 ATCACATGAC
M6346_1.02 19 CCACGGCGGTGTCACATGC
M6347_1.02 7 TAATTGT
M6348_1.02 17 AGTGCCGTGTGCAAAAC
M6349_1.02 10 TCAACCTGCA
M6350_1.02 7 CAGTTGG
M6352_1.02 8 CCACGTGG
M6353_1.02 7 GCAGCTG
M6354_1.02 9 GACAGCTGC
M6355_1.02 13 TGACAGCTGCTGC
M6356_1.02 9 GGTGGGGAA
M6357_1.02 8 TTTAATGG
M6358_1.02 12 CGGCAGATGGCC
M6359_1.02 7 AATGACT
M6360_1.02 12 CATGACTCAGCA
M6361_1.02 13 ATGGAAATTTCCA
M6363_1.02 9 AATTTTCCA
M6364_1.02 9 AGTTTTCCA
M6365_1.02 10 AAATTTTCCT
M6366_1.02 15 CATGGATTTTTCCAC
M6368_1.02 14 ATGCATTACATAAC
M6370_1.02 11 GGAATCTCCCT
M6373_1.02 14 CAGCCAATCAGCGC
M6374_1.02 10 CTCAAGTGCT
M6375_1.02 12 AAACCACTTAAA
M6376_1.02 7 TCAAGTG
M6377_1.02 9 TTCAAGGAC
M6378_1.02 13 AATAAGTATATAA
M6379_1.02 11 AGTTAAGTGGA
M6380_1.02 9 TTAATTGGT
M6381_1.02 10 TCTCCCACGC
M6382_1.02 14 TTTGACCTACTTTT
M6383_1.02 19 CGTTGACCTTTGACCTTTA
M6384_1.02 14 AGGTCATTGACCCT
M6385_1.02 19 CTGAACTTTTTTGACCTCA
M6387_1.02 18 CTGAACTTTCCTGACCCC
M6389_1.02 13 CTGACCTCTGGCC
M6391_1.02 14 TGACTTTTGACTTT
M6392_1.02 18 TCAATTGAACTTTGTCCT
M6393_1.02 9 GTGACCTTT
M6394_1.02 9 GTGACCTTT
M6395_1.02 10 CTGACCTTTG
M6396_1.02 10 TGGCCTTGAA
M6397_1.02 13 TGACCTTGAACTT
M6399_1.02 21 GTCTTGTTATTGATTTTTTTT
M6400_1.02 8 CTAATCCT
M6401_1.02 15 CTTTAATCCCTTAAC
M6402_1.02 9 TGTAACTGT
M6406_1.02 18 GTTCAGTCATGCGTGACA
M6410_1.02 11 TCAAGCGTGAA
M6411_1.02 14 GTCACTGAAGCGTG
M6412_1.02 15 CCCATCAATCAAATT
M6413_1.02 15 CCATCAATCAATTTA
M6415_1.02 9 CTAATTACC
M6416_1.02 11 TCTGTGGTTTG
M6417_1.02 13 ATATATTCATGAG
M6418_1.02 10 TTTAATCCCA
M6419_1.02 13 CATCAATCAAGCT
M6420_1.02 17 GGGGGCATCAGGAGGGG
M6422_1.02 10 CGGGGGGCCC
M6423_1.02 9 ATTTGCATA
M6425_1.02 14 TTTGCATTACAATG
M6426_1.02 10 CATAAATAAT
M6427_1.02 13 CAGCTCATTAATA
M6429_1.02 13 CATAATTTATGCA
M6430_1.02 7 TGACCTT
M6432_1.02 14 TGACCTTTGTCCTA
M6433_1.02 18 GTGACCTTTGACCTACTT
M6436_1.02 13 TACAGACTGTTCT
M6438_1.02 15 GAGTAATTAATATAA
M6439_1.02 7 TAATCTG
M6440_1.02 7 TTAATTG
M6441_1.02 21 GGACAGCTGTTCTGTTTCCTG
M6442_1.02 17 CCCTGCCCCCCCCTTCC
M6443_1.02 7 TGACCTC
M6445_1.02 11 GCCCTGACCTC
M6446_1.02 20 GTGACCTCTGGGTGACCCCC
M6448_1.02 12 GGGGGATTTCCC
M6449_1.02 12 TGGGGATTTCCC
M6451_1.02 12 GTTGCTAGGGAA
M6453_1.02 14 TTACCATGGCAACC
M6454_1.02 12 TGACCTAGTTTT
M6455_1.02 13 CTGACCTACTTTT
M6456_1.02 22 GGGGGGGGGGGTGGTTTGGGGT
M6457_1.02 10 TAACCACAAA
M6459_1.02 14 AACCACAAAACCCA
M6461_1.02 10 TGTGACCTCA
M6462_1.02 13 GTGACCTTTGACC
M6463_1.02 12 AGCCTGTCTGCC
M6464_1.02 11 GTGTCTGTCTG
M6465_1.02 10 GTGTCTGGCC
M6466_1.02 9 TGTCTGGCC
M6468_1.02 8 CCAGGTGG
M6469_1.02 7 TCAGGTG
M6470_1.02 7 TCTTTGT
M6471_1.02 8 CATTGTTC
M6472_1.02 7 CATTGTT
M6473_1.02 18 CAACAATCTTCATTGTCC
M6474_1.02 19 GGAAAAGAACAATGGGTTC
M6475_1.02 16 ATTTGCATAACAATGG
M6476_1.02 12 GAGAACAAAGCG
M6477_1.02 8 TAACAATA
M6478_1.02 11 AGAACAATGGG
M6482_1.02 20 GGGGGGGGGCGGGGCCGGGG
M6483_1.02 24 GGGGCCAGGGGGGGGGCGGGGCCG
M6485_1.02 12 AAAAAGAGGAAG
M6486_1.02 16 CGGCTGTTACCCTGGG
M6490_1.02 9 AAAACAAAA
M6491_1.02 12 TTTCCAGGAATT
M6492_1.02 13 TTTTCTAGGAATT
M6496_1.02 13 TTTCCCAGAAAAG
M6497_1.02 13 TTCCCAGGAATTT
M6498_1.02 9 TGACCTTGA
M6499_1.02 9 CGTGGGAAA
M6500_1.02 12 GACCATCTGTTC
M6503_1.02 25 GTCGCTTTTCACACCTCTGATGGCA
M6504_1.02 24 AGGTAGAGAATTAGGTGATAAAAA
M6505_1.02 8 AGGTGTGA
M6506_1.02 12 GCGCTTTGTTCT
M6507_1.02 14 CACATTCCTGCGCC
M6508_1.02 15 GATATTTCTGCTTTA
M6509_1.02 12 AAAAATAGCTCT
M6510_1.02 14 TGTTTATGTAAATG
M6513_1.02 11 GCCAGCTGCGG
M6514_1.02 16 GCCTGAACTGGCCAGA
M6515_1.02 14 AAATGGCGGGAAAC
M6516_1.02 11 GACCATCTGGT
M6517_1.02 10 GGTCATGTGG
M6518_1.02 9 GGTCACGTG
M6519_1.02 16 CAGGTGACACCTGACA
M6521_1.02 10 CTGACCTGAA
M6523_1.02 17 TGACCTGACCTGACCTC
M6525_1.02 11 CGCCAAGGAGC
M6527_1.02 10 ACCCAGGTGG
M6529_1.02 7 TTTCTGG
M6532_1.02 7 TGACCTC
M6534_1.02 11 TTAGCTAATTA
M6535_1.02 13 GCGGGGGCGGGGG
M6536_1.02 12 GACGTGTCATTA
M6537_1.02 11 GGGGATTGGCC
M6539_1.02 22 CGGAGAGGGGGAGGGGGGGGGC
M6540_1.02 15 CAATAGCGATGGTGG
M6542_1.02 13 AGATGATAGAGCC
M6544_1.02 12 GGGGATTTCCCA
M6545_1.02 14 GGTAGGGAAACCCC
M6546_1.02 11 ATTAATAATTA
M6547_1.02 19 GAGGGCCCCAGGCCTCGGC
M6548_1.02 9 GGGGTGGTC
M6549_1.02 9 GGGGTGGTC
M6550_1.02 9 TGGGTGGTC
M6552_1.02 15 GGGGTGGGGGAGGGG
M6553_1.02 12 GAGGGGGGCGGA
M6554_1.02 14 TCCAGATGTTTCGG
M6555_1.02 9 CGATAATGA
M6556_1.02 24 GGGCAACAAATACCTGCGCCCCGT
M6557_1.02 12 GGAAAAAATCGG
M6558_1.02 15 GCACCCTTGGGTGCC
M6559_1.02 16 CCCACGGTTACTGCCG

Random model letter frequencies (/srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/GLI2.IDR0.05.filt.narrowPeak.outsidePolsteinDNase.summitPlusMinus250bp.MemeChipResults/background):
A 0.299 C 0.201 G 0.201 T 0.299


SECTION I: HIGH-SCORING MOTIF OCCURENCES

Motif ID Alt ID Sequence Name Strand Start End p-value q-value Matched Sequence
M4623_1.02 JUNB chr20 - 46085302 46085316 2.01e-08 0.0116 TGGTGACTCATGCCT
M4623_1.02 JUNB chr11 + 79524487 79524501 1.1e-07 0.0318 cagtgactcatgcct
M4623_1.02 JUNB chr20 + 45349461 45349475 3.54e-07 0.0477 cagtgagtcatgcct
M4623_1.02 JUNB chr21 + 43857623 43857637 4.05e-07 0.0477 tagtgactcatgcct
M4623_1.02 JUNB chr1 + 218686447 218686461 4.32e-07 0.0477 GAGTGACTCATTCCC
M4623_1.02 JUNB chr7 + 133492272 133492286 5.66e-07 0.0477 tggtgactcattctg
M4623_1.02 JUNB chrX - 115255149 115255163 5.77e-07 0.0477 TTGTGACTCATTCCT
M4623_1.02 JUNB chr7 + 150360265 150360279 7.66e-07 0.0519 aagtgactcatcctc
M4623_1.02 JUNB chr4 + 26568834 26568848 8.34e-07 0.0519 TGATGACTCATGCTG
M4623_1.02 JUNB chr6 + 43322285 43322299 9.01e-07 0.0519 cagtgactcacgcct
M4623_1.02 JUNB chr21 - 35593155 35593169 1.06e-06 0.0519 CAGTGACTCATTCCG
M4623_1.02 JUNB chr1 - 225425521 225425535 1.08e-06 0.0519 GGGTGACTCAGCCAG
M4623_1.02 JUNB chr2 + 77009433 77009447 1.28e-06 0.0561 ATATGACTCATCCCT
M4623_1.02 JUNB chr19 - 1771820 1771834 1.36e-06 0.0561 TGGTGACTCACACCT
M4623_1.02 JUNB chr1 - 19505149 19505163 1.58e-06 0.0592 TTCTGACTCATCCCC
M4623_1.02 JUNB chr1 + 85051019 85051033 1.64e-06 0.0592 cagtgagtcattctt
M4623_1.02 JUNB chr1 - 232732506 232732520 1.99e-06 0.0652 CTATGAGTCATTCCT
M4623_1.02 JUNB chr5 + 17315829 17315843 2.03e-06 0.0652 TGCTGACTCATCCTG
M4623_1.02 JUNB chr8 + 30254861 30254875 2.36e-06 0.0718 agctgactcatgctc
M4623_1.02 JUNB chr18 + 52312501 52312515 4.6e-06 0.133 TAGTGAGTCACCCTT
M4623_1.02 JUNB chrX + 17413440 17413454 5.02e-06 0.134 TTATGAGTCATTCTC
M4623_1.02 JUNB chrX - 71349339 71349353 5.08e-06 0.134 GAGTGAGTCATTCAC
M4623_1.02 JUNB chr8 - 27617213 27617227 5.41e-06 0.134 CAGTGACTCAGCATC
M4623_1.02 JUNB chr6 + 13007103 13007117 5.58e-06 0.134 gtctgactcattctt
M4623_1.02 JUNB chr22 - 18020996 18021010 6.07e-06 0.139 TTGTGACTCATCAGT
M4623_1.02 JUNB chr15 + 63506588 63506602 6.34e-06 0.139 TTGTGAGTCAGTCTT
M4623_1.02 JUNB chr6 + 82397129 82397143 6.79e-06 0.139 TTGTGAGTCACCTCT
M4623_1.02 JUNB chr7 - 17600409 17600423 6.86e-06 0.139 TAATGACTCATGGTC
M4623_1.02 JUNB chr12 - 58933554 58933568 7.23e-06 0.139 TGGTGACTCATTGAG
M4623_1.02 JUNB chr8 - 118078739 118078753 7.7e-06 0.139 CTATGACTCATATTT
M4623_1.02 JUNB chr19 + 36070592 36070606 7.78e-06 0.139 TTGTGACTCACTCTG
M4623_1.02 JUNB chr17 - 41404124 41404138 7.84e-06 0.139 AGGTGAGTCATTCAG
M4623_1.02 JUNB chr2 + 158232665 158232679 7.98e-06 0.139 CTGTGACTCAGTCAG
M4623_1.02 JUNB chr17 - 71632630 71632644 8.19e-06 0.139 GTGTGACTCAGCAGC
M4623_1.02 JUNB chr9 + 109118046 109118060 9.77e-06 0.156 GGATGAGTCATGAAC
M4623_1.02 JUNB chr17 - 40854419 40854433 9.9e-06 0.156 CAGTGAGTCATTATC
M4623_1.02 JUNB chr19 + 28428875 28428889 9.99e-06 0.156 TTATGAGTCATCACT
M4623_1.02 JUNB chr17 + 41404126 41404140 1.05e-05 0.157 gaatgactcaccttc
M4623_1.02 JUNB chr1 - 218686445 218686459 1.15e-05 0.157 GAATGAGTCACTCCC
M4623_1.02 JUNB chr2 - 77009431 77009445 1.19e-05 0.157 GGATGAGTCATATTG
M4623_1.02 JUNB chr17 - 13421062 13421076 1.2e-05 0.157 TAATGACTCATTTCT
M4623_1.02 JUNB chr2 + 128229103 128229117 1.2e-05 0.157 taatgactcatttct
M4623_1.02 JUNB chr19 - 18106512 18106526 1.22e-05 0.157 CGGTGGCTCATGCCT
M4623_1.02 JUNB chr5 - 69521112 69521126 1.22e-05 0.157 CGGTGGCTCATGCCT
M4623_1.02 JUNB chr5 + 65870100 65870114 1.22e-05 0.157 cggtggctcatgcct
M4623_1.02 JUNB chr18 - 52312499 52312513 1.28e-05 0.157 GGGTGACTCACTAAC
M4623_1.02 JUNB chr16 + 15591113 15591127 1.28e-05 0.157 cagtgagtcagatcc
M4623_1.02 JUNB chr14 + 24982671 24982685 1.31e-05 0.157 CCATGACTCATGTCT
M4623_1.02 JUNB chr1 + 232732508 232732522 1.33e-05 0.157 gaatgactcatagtt
M4623_1.02 JUNB chr1 - 169886691 169886705 1.36e-05 0.157 TGATGACTCATATAT
M4623_1.02 JUNB chr6 - 13007101 13007115 1.48e-05 0.16 GAATGAGTCAGACCT
M4623_1.02 JUNB chr9 - 109118044 109118058 1.48e-05 0.16 TCATGACTCATCCGT
M4623_1.02 JUNB chr16 + 15590991 15591005 1.5e-05 0.16 tgatgagtcagatcc
M4623_1.02 JUNB chr11 + 93986841 93986855 1.5e-05 0.16 TCATGACTCATTCCT
M4623_1.02 JUNB chr11 + 113907303 113907317 1.57e-05 0.16 CTGTGAGTCATTTAG
M4623_1.02 JUNB chr8 - 143056245 143056259 1.63e-05 0.16 ATGTGACTCAGGTTG
M4623_1.02 JUNB chr3 + 129179491 129179505 1.71e-05 0.16 CTATGAGTCAGTCAT
M4623_1.02 JUNB chr13 - 39148635 39148649 1.74e-05 0.16 CAATGACTCATTGAT
M4623_1.02 JUNB chr19 + 1771822 1771836 1.76e-05 0.16 gtgtgagtcaccatg
M4623_1.02 JUNB chr1 + 169886693 169886707 1.77e-05 0.16 ATATGAGTCATCATC
M4623_1.02 JUNB chr9 - 130700294 130700308 1.78e-05 0.16 TGGTGGCTCATGCCC
M4623_1.02 JUNB chr6 - 129183882 129183896 1.8e-05 0.16 GTATGAGTCATTGTG
M4623_1.02 JUNB chr3 + 188272826 188272840 1.87e-05 0.16 CTATGACTAATCCTT
M4623_1.02 JUNB chr5 - 17315827 17315841 1.89e-05 0.16 GGATGAGTCAGCAAT
M4623_1.02 JUNB chr13 + 39148637 39148651 1.94e-05 0.16 CAATGAGTCATTGGC
M4623_1.02 JUNB chr1 - 22980266 22980280 2.04e-05 0.16 TGGTGGCTCATGCCT
M4623_1.02 JUNB chr10 - 71886561 71886575 2.04e-05 0.16 TGGTGGCTCATGCCT
M4623_1.02 JUNB chr8 - 118078473 118078487 2.04e-05 0.16 TGGTGGCTCATGCCT
M4623_1.02 JUNB chrX - 140539804 140539818 2.04e-05 0.16 TGGTGGCTCATGCCT
M4623_1.02 JUNB chr17 + 1317152 1317166 2.04e-05 0.16 tggtggctcatgcct
M4623_1.02 JUNB chr5 + 17326202 17326216 2.04e-05 0.16 tggtggctcatgcct
M4623_1.02 JUNB chr6 + 27840632 27840646 2.04e-05 0.16 tggtggctcatgcct
M4623_1.02 JUNB chr17 + 55495516 55495530 2.04e-05 0.16 tggtggctcatgcct
M4623_1.02 JUNB chr13 + 33247058 33247072 2.05e-05 0.16 tggtgacacatgcct
M4623_1.02 JUNB chr5 - 115873618 115873632 2.2e-05 0.168 GACTGACTCATGTGT
M4623_1.02 JUNB chr18 + 9705414 9705428 2.21e-05 0.168 agatgactcagtact
M4623_1.02 JUNB chr8 - 17540164 17540178 2.37e-05 0.172 TAATGAGTCATTTTT
M4623_1.02 JUNB chr6 + 4139466 4139480 2.41e-05 0.172 TTGTGAGTCAGTTGC
M4623_1.02 JUNB chr16 - 30500024 30500038 2.43e-05 0.172 CGATGGCTCATGCCT
M4623_1.02 JUNB chr17 - 37488377 37488391 2.46e-05 0.172 CAATGACTCAGCAAC
M4623_1.02 JUNB chr17 + 46101478 46101492 2.47e-05 0.172 cggtggctcaggcct
M4623_1.02 JUNB chr7 - 112137809 112137823 2.48e-05 0.172 GTGTGAGTCAGGTCA
M4623_1.02 JUNB chr17 - 46101211 46101225 2.58e-05 0.172 ATGTGACTCAGCAAT
M4623_1.02 JUNB chr10 + 129440547 129440561 2.62e-05 0.172 ctgtgacttatccct
M4623_1.02 JUNB chr5 + 69521314 69521328 2.66e-05 0.172 cgatgattcattctc
M4623_1.02 JUNB chr7 - 150360263 150360277 2.76e-05 0.172 GGATGAGTCACTTAT
M4623_1.02 JUNB chr16 - 30591026 30591040 2.85e-05 0.172 CGGTGGCTCACGCCT
M4623_1.02 JUNB chr19 - 34218279 34218293 2.85e-05 0.172 CGGTGGCTCACGCCT
M4623_1.02 JUNB chrX - 71349600 71349614 2.85e-05 0.172 CGGTGGCTCACGCCT
M4623_1.02 JUNB chr19 + 1886679 1886693 2.85e-05 0.172 cggtggctcacgcct
M4623_1.02 JUNB chr16 + 15591319 15591333 2.85e-05 0.172 cggtggctcacgcct
M4623_1.02 JUNB chr19 + 33123126 33123140 2.85e-05 0.172 cggtggctcacgcct
M4623_1.02 JUNB chr10 - 126500249 126500263 2.89e-05 0.172 TGGTGACTCAACGGC
M4623_1.02 JUNB chr17 + 40854380 40854394 2.91e-05 0.172 AAGTGAGTCATCTCA
M4623_1.02 JUNB chr8 - 27945304 27945318 2.96e-05 0.172 CTATGAGTCAGTGTG
M4623_1.02 JUNB chr5 + 31873373 31873387 2.96e-05 0.172 cagtgagtcatgata
M4623_1.02 JUNB chr17 + 1317076 1317090 2.99e-05 0.172 AGGTGAGTCACAGGT
M4623_1.02 JUNB chr17 - 1317074 1317088 3.01e-05 0.172 CTGTGACTCACCTAA
M4623_1.02 JUNB chr8 - 2075513 2075527 3.01e-05 0.172 CTGTGACGCATGCTT
M4623_1.02 JUNB chr17 - 40854378 40854392 3.02e-05 0.172 AGATGACTCACTTTG
M4623_1.02 JUNB chr22 + 41817593 41817607 3.07e-05 0.172 aggtgacgcatgcct
M4623_1.02 JUNB chr18 - 49523657 49523671 3.08e-05 0.172 TCCTGACTCAGCCTC
M4623_1.02 JUNB chr1 - 53994587 53994601 3.08e-05 0.172 TCCTGACTCAGCCTC
M4623_1.02 JUNB chrX + 71349341 71349355 3.21e-05 0.172 GAATGACTCACTCAG
M4623_1.02 JUNB chr22 + 40625505 40625519 3.32e-05 0.172 gggtggctcacgcct
M4623_1.02 JUNB chr1 + 19188280 19188294 3.33e-05 0.172 cagtggctcatgcct
M4623_1.02 JUNB chr5 - 31873677 31873691 3.33e-05 0.172 CAGTGGCTCATGCCT
M4623_1.02 JUNB chr19 + 43572530 43572544 3.33e-05 0.172 cagtggctcatgcct
M4623_1.02 JUNB chr12 + 56220132 56220146 3.33e-05 0.172 cagtggctcatgcct
M4623_1.02 JUNB chr10 - 113078011 113078025 3.33e-05 0.172 CAGTGGCTCATGCCT
M4623_1.02 JUNB chr3 + 129179597 129179611 3.33e-05 0.172 cagtggctcatgcct
M4623_1.02 JUNB chr1 + 154015981 154015995 3.33e-05 0.172 cagtggctcatgcct
M4623_1.02 JUNB chr1 - 243434228 243434242 3.38e-05 0.172 GGGTGATTCATTTCT
M4623_1.02 JUNB chr18 + 51193854 51193868 3.39e-05 0.172 ATGTGACTCagaatt
M4623_1.02 JUNB chr22 + 18020998 18021012 3.42e-05 0.172 tgatgagtcacaatc
M4623_1.02 JUNB chr12 - 71626958 71626972 3.5e-05 0.174 TTCTGACTCATTTAC
M4623_1.02 JUNB chr5 - 125408588 125408602 3.61e-05 0.177 CTGTGAGTCTTGCCT
M4623_1.02 JUNB chr8 + 27945306 27945320 3.62e-05 0.177 cactgactcatagac
M4623_1.02 JUNB chr1 + 225425523 225425537 3.78e-05 0.184 GGCTGAGTCACCCGA
M4623_1.02 JUNB chr6 + 129183884 129183898 3.87e-05 0.184 CAATGACTCATACAA
M4623_1.02 JUNB chr5 + 14580583 14580597 3.89e-05 0.184 CTGTGAATCATGCAT
M4623_1.02 JUNB chr12 + 58933556 58933570 3.89e-05 0.184 CAATGAGTCACCATG
M4623_1.02 JUNB chr1 - 85051017 85051031 3.93e-05 0.185 GAATGACTCACTGAC
M4623_1.02 JUNB chr2 + 138072410 138072424 3.96e-05 0.185 TCATGAGTCATGTTT
M4623_1.02 JUNB chr19 + 28425645 28425659 4.03e-05 0.186 gagtgagtcacgcaa
M4623_1.02 JUNB chrX + 14027821 14027835 4.15e-05 0.188 CTCTGACTCAGGAAC
M4623_1.02 JUNB chr6 + 136607426 136607440 4.25e-05 0.188 GGTTGAGTCATGTGT
M4623_1.02 JUNB chr1 + 244656587 244656601 4.31e-05 0.188 AGGTGACTCAGATTA
M4623_1.02 JUNB chr19 - 28428873 28428887 4.42e-05 0.188 TGATGACTCATAATA
M4623_1.02 JUNB chrX + 72210091 72210105 4.42e-05 0.188 cggtggctcatgact
M4623_1.02 JUNB chr19 - 42477888 42477902 4.43e-05 0.188 TGGTGGCTCACGCCT
M4623_1.02 JUNB chr11 + 47519592 47519606 4.43e-05 0.188 tggtggctcacgcct
M4623_1.02 JUNB chrX + 71116846 71116860 4.43e-05 0.188 tggtggctcacgcct
M4623_1.02 JUNB chrX + 136058576 136058590 4.43e-05 0.188 tggtggctcacgcct
M4623_1.02 JUNB chr5 - 160081515 160081529 4.43e-05 0.188 TGGTGCCTCACGCCT
M4623_1.02 JUNB chr5 - 126819631 126819645 4.45e-05 0.188 TGGTGACACACGCCT
M4623_1.02 JUNB chr10 + 126500251 126500265 4.52e-05 0.188 CGTTGAGTCACCACC
M4623_1.02 JUNB chr7 - 133492270 133492284 4.52e-05 0.188 GAATGAGTCACCATG
M4623_1.02 JUNB chr6 - 138402816 138402830 4.54e-05 0.188 GGGTGACTCTTCTGC
M4623_1.02 JUNB chr2 - 12304683 12304697 4.56e-05 0.188 CTGTGACACAGCCTT
M4623_1.02 JUNB chr3 + 100269777 100269791 4.59e-05 0.188 tgatgtctcattccc
M4623_1.02 JUNB chr19 - 36070739 36070753 4.68e-05 0.189 TTATGAGTCATTTAG
M4623_1.02 JUNB chr11 - 93986839 93986853 4.72e-05 0.189 GAATGAGTCATGAAG
M4623_1.02 JUNB chr5 - 125409256 125409270 4.72e-05 0.189 CGGTGAGTAATTCCA
M4623_1.02 JUNB chr21 - 29217870 29217884 4.78e-05 0.19 ATATGAGTCATTACG
M4623_1.02 JUNB chr3 - 129179489 129179503 4.79e-05 0.19 GACTGACTCATAGAT
M4623_1.02 JUNB chr2 + 39492327 39492341 4.83e-05 0.19 GTTTGACTCATGGTG
M4623_1.02 JUNB chr4 - 26568832 26568846 5.02e-05 0.196 GCATGAGTCATCAGC
M4623_1.02 JUNB chr12 - 12398449 12398463 5.08e-05 0.197 TTCTGACTCAGATTT
M4623_1.02 JUNB chr1 - 219325229 219325243 5.14e-05 0.198 TTATGAGTCAAGCCT
M4623_1.02 JUNB chr5 - 134851203 134851217 5.22e-05 0.198 CGATGGCTCACGCCT
M4623_1.02 JUNB chr18 - 9705412 9705426 5.26e-05 0.198 TACTGAGTCATCTGG
M4623_1.02 JUNB chr5 - 127023907 127023921 5.28e-05 0.198 AGGTGACTAAGCTTT
M4623_1.02 JUNB chr22 - 18020985 18020999 5.36e-05 0.198 CAGTGAGTCATGAAA
M4623_1.02 JUNB chr8 + 8933202 8933216 5.39e-05 0.198 ttgttactcatcctt
M4623_1.02 JUNB chr7 - 112137596 112137610 5.41e-05 0.198 AAATGAGTCATTATT
M4623_1.02 JUNB chr18 + 49523489 49523503 5.45e-05 0.198 tggtggctcacgctt
M4623_1.02 JUNB chr18 + 65754298 65754312 5.45e-05 0.198 GTGTGATTCATTTCC
M4623_1.02 JUNB chr17 + 40545010 40545024 5.49e-05 0.198 cggtggctcacacct
M4623_1.02 JUNB chr10 - 71886323 71886337 5.49e-05 0.198 CGGTGGCTCACACCT
M4623_1.02 JUNB chr8 + 118078741 118078755 5.51e-05 0.198 ATATGAGTCATAGAT
M4623_1.02 JUNB chr17 + 50694232 50694246 5.61e-05 0.2 gggtgagtaagtcac
M4623_1.02 JUNB chr10 - 11093906 11093920 5.65e-05 0.2 CACTGACTCAACCTT
M4623_1.02 JUNB chr6 - 82397127 82397141 5.69e-05 0.2 AGGTGACTCACAAAG
M4623_1.02 JUNB chr7 + 112137598 112137612 5.8e-05 0.203 taatgactcatttta
M4623_1.02 JUNB chr3 - 17550735 17550749 5.87e-05 0.204 TTGTGACTCACAGTA
M4623_1.02 JUNB chr16 - 15590989 15591003 5.94e-05 0.205 ATCTGACTCATCAGG
M4623_1.02 JUNB chr7 + 23334774 23334788 6.03e-05 0.205 CAATGAGTAATTCCT
M4623_1.02 JUNB chr11 - 113907301 113907315 6.03e-05 0.205 AAATGACTCACAGTT
M4623_1.02 JUNB chr6 + 31073078 31073092 6.06e-05 0.205 cagtggctcatgctg
M4623_1.02 JUNB chr19 - 28425643 28425657 6.08e-05 0.205 GCGTGACTCACTCTA
M4623_1.02 JUNB chr2 - 43634839 43634853 6.15e-05 0.205 TTGTGAGTCAGAAAT
M4623_1.02 JUNB chr11 - 67122598 67122612 6.15e-05 0.205 CGGTGGCTCACGTCT
M4623_1.02 JUNB chr22 - 18020808 18020822 6.22e-05 0.205 TTGTGCCTCAGCCTC
M4623_1.02 JUNB chr19 - 35385949 35385963 6.22e-05 0.205 CAGTGGCTCAGGCCT
M4623_1.02 JUNB chr5 - 175898883 175898897 6.3e-05 0.207 GTATGATTCAGCCTT
M4623_1.02 JUNB chr6 + 44447001 44447015 6.35e-05 0.207 CTGTGAGTAACTCTT
M4623_1.02 JUNB chr6 - 43322075 43322089 6.38e-05 0.207 TAGTGGCTCATGCTT
M4623_1.02 JUNB chrX + 54428105 54428119 6.43e-05 0.207 cagtggctcatacct
M4623_1.02 JUNB chr10 - 10805427 10805441 6.46e-05 0.207 AACTGAGTCATGATT
M4623_1.02 JUNB chr16 - 15591111 15591125 6.64e-05 0.212 ATCTGACTCACTGTT
M4623_1.02 JUNB chr8 - 30254859 30254873 6.67e-05 0.212 GCATGAGTCAGCTTG
M4623_1.02 JUNB chrX - 17413438 17413452 6.74e-05 0.213 GAATGACTCATAACA
M4623_1.02 JUNB chr1 + 19505151 19505165 6.82e-05 0.214 GGATGAGTCAGAAAG
M4623_1.02 JUNB chr4 + 10619049 10619063 6.94e-05 0.215 GAGTGTCTCAGGCTC
M4623_1.02 JUNB chr19 + 37160059 37160073 6.94e-05 0.215 tggtggctcactcct
M4623_1.02 JUNB chr7 + 85592350 85592364 6.97e-05 0.215 TGATGACACATGCTG
M4623_1.02 JUNB chr10 + 922799 922813 7.16e-05 0.217 cagtggctcacgcct
M4623_1.02 JUNB chr16 + 21572644 21572658 7.16e-05 0.217 cagtggctcacgcct
M4623_1.02 JUNB chr6 - 73427125 73427139 7.16e-05 0.217 CAGTGGCTCACGCCT
M4623_1.02 JUNB chr1 + 236315458 236315472 7.16e-05 0.217 cagtggctcacgcct
M4623_1.02 JUNB chr1 - 244656585 244656599 7.27e-05 0.219 ATCTGAGTCACCTGC
M4623_1.02 JUNB chr15 + 69128635 69128649 7.31e-05 0.219 gggtgagccagaccc
M4623_1.02 JUNB chr1 - 68370415 68370429 7.57e-05 0.223 TGGTGGCTCACACCC
M4623_1.02 JUNB chr12 - 117200728 117200742 7.57e-05 0.223 CAATGATTCATGTCC
M4623_1.02 JUNB chr14 - 24982669 24982683 7.64e-05 0.223 ACATGAGTCATGGGC
M4623_1.02 JUNB chr9 + 108477595 108477609 7.67e-05 0.223 TTATGACTCATGAAA
M4623_1.02 JUNB chr19 - 1771954 1771968 7.69e-05 0.223 AAGTGGCTCATGCCT
M4623_1.02 JUNB chr10 + 11093908 11093922 7.69e-05 0.223 GGTTGAGTCAGTGTT
M4623_1.02 JUNB chr11 + 36741484 36741498 7.83e-05 0.224 GTGTGACTTATGGCT
M4623_1.02 JUNB chr10 + 129441091 129441105 7.83e-05 0.224 GGGTGACTGATACAC
M4623_1.02 JUNB chr17 + 71632632 71632646 7.85e-05 0.224 TGCTGAGTCACACTA
M4623_1.02 JUNB chr17 - 41404082 41404096 7.88e-05 0.224 AAGTGAGTCAGTGGG
M4623_1.02 JUNB chr5 + 175898885 175898899 7.92e-05 0.224 ggctgaatcatactc
M4623_1.02 JUNB chr10 + 36740245 36740259 7.98e-05 0.224 atgtgagtaatgcat
M4623_1.02 JUNB chr6 - 43322120 43322134 7.98e-05 0.224 CTTTGACTCATTGAT
M4623_1.02 JUNB chr8 + 27974650 27974664 8.01e-05 0.224 TGGTTACTCATCACT
M4623_1.02 JUNB chr8 + 17498155 17498169 8.11e-05 0.224 AGGTGACTAATTTTG
M4623_1.02 JUNB chr21 - 35578511 35578525 8.11e-05 0.224 GTGTGAGACATTCTT
M4623_1.02 JUNB chr6 + 82397223 82397237 8.18e-05 0.225 CTGTGACTAATCTTA
M4623_1.02 JUNB chr19 + 36070741 36070755 8.31e-05 0.227 aaatgactcataaat
M4623_1.02 JUNB chr8 + 27617215 27617229 8.35e-05 0.227 tgctgagtcactggg
M4623_1.02 JUNB chrX - 39662679 39662693 8.66e-05 0.235 TGGTGGCTCACACCT
M4623_1.02 JUNB chr6 - 10798970 10798984 8.69e-05 0.235 TGGTGACACACACCT
M4623_1.02 JUNB chr7 - 104989632 104989646 8.78e-05 0.236 TGGAGACTCATATCT
M4623_1.02 JUNB chr17 + 40854421 40854435 8.97e-05 0.24 TAATGACTCACTGAG
M4623_1.02 JUNB chr4 + 53576897 53576911 9.09e-05 0.242 CATTGAGTCAGCTTT
M4623_1.02 JUNB chr7 + 17600411 17600425 9.17e-05 0.242 CCATGAGTCATTATG
M4623_1.02 JUNB chr19 + 28520487 28520501 9.2e-05 0.242 GGGTGACTTACGGCT
M4623_1.02 JUNB chr13 - 106096764 106096778 9.2e-05 0.242 AAGTGACTAAGCCTG
M4623_1.02 JUNB chr1 + 51665120 51665134 9.34e-05 0.244 gtgtgactaagggac
M4623_1.02 JUNB chr17 - 55495350 55495364 9.38e-05 0.244 TGGTGAATCACCATC
M4623_1.02 JUNB chr12 - 71627004 71627018 9.53e-05 0.247 CTGTGTGTCATTTCC
M4623_1.02 JUNB chr5 - 76585789 76585803 9.62e-05 0.248 CGGTGGCTCACGACT
M4623_1.02 JUNB chr20 + 50518510 50518524 9.97e-05 0.256 CACTGAGTCATAAAT

DEBUGGING INFORMATION

Command line:

/software/meme/4.12.0/bin/fimo --parse-genomic-coord --verbosity 1 --oc /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/GLI2.IDR0.05.filt.narrowPeak.outsidePolsteinDNase.summitPlusMinus250bp.MemeChipResults/fimo_out_23 --bgfile /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/GLI2.IDR0.05.filt.narrowPeak.outsidePolsteinDNase.summitPlusMinus250bp.MemeChipResults/background --motif M4623_1.02 /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/MotifData/motif_databases/CIS-BP/Homo_sapiens.meme /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/GLI2.IDR0.05.filt.narrowPeak.outsidePolsteinDNase.summitPlusMinus250bp.MemeChipResults/GLI2.IDR0.05.filt.narrowPeak.outsidePolsteinDNase.summitPlusMinus250bp.fa

Settings:

output_directory = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/GLI2.IDR0.05.filt.narrowPeak.outsidePolsteinDNase.summitPlusMinus250bp.MemeChipResults/fimo_out_23 MEME file name = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/MotifData/motif_databases/CIS-BP/Homo_sapiens.meme sequence file name = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/GLI2.IDR0.05.filt.narrowPeak.outsidePolsteinDNase.summitPlusMinus250bp.MemeChipResults/GLI2.IDR0.05.filt.narrowPeak.outsidePolsteinDNase.summitPlusMinus250bp.fa
background file name = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/GLI2.IDR0.05.filt.narrowPeak.outsidePolsteinDNase.summitPlusMinus250bp.MemeChipResults/background alphabet = DNA max stored scores = 100000
allow clobber = true compute q-values = true parse genomic coord. = true
text only = false scan both strands = true max strand = false
threshold type = p-value output theshold = 0.0001 pseudocount = 0.1
alpha = 1 verbosity = 1

This information can be useful in the event you wish to report a problem with the FIMO software.


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