# WARNING: this file is not sorted! # db id alt consensus E-value adj_p-value log_adj_p-value bin_location bin_width total_width sites_in_bin total_sites p_success p-value mult_tests 1 AAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATA MEME-1 AAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATA 7.3e-198 9.8e-201 -460.54 0.0 26 456 191 219 0.05702 4.3e-203 227 1 CAGAGYGAGACTCYRT MEME-2 CAGAGYGAGACTCYRT 6.0e-034 7.9e-037 -83.12 0.0 109 485 163 274 0.22474 3.3e-039 242 1 AAAWAAATAAATAAAWAAAHAAANAHAWAWW MEME-3 AAAWAAATAAATAAAWAAAHAAANAHAWAWW 2.2e-135 3.0e-138 -316.67 0.0 28 470 189 328 0.05957 1.3e-140 234 1 AGACTCTGTCTC MEME-4 AGACTCTGTCTC 3.4e-010 4.6e-013 -28.41 0.0 93 489 125 330 0.19018 1.9e-015 244 1 CAGCCTGGGCRA MEME-6 CAGCCTGGGCRA 3.8e-015 5.0e-018 -39.83 0.0 137 489 140 249 0.28016 2.1e-020 244 1 AAAAYAMANAAAMAMA MEME-10 AAAAYAMANAAAMAMA 4.8e-075 6.5e-078 -177.74 0.0 57 485 228 495 0.11753 2.7e-080 242 2 ARATAAAT DREME-1 AAATAAAT 7.0e-128 9.4e-131 -299.40 0.0 49 493 208 302 0.09939 3.8e-133 246 2 CTCTGTY DREME-2 CTCTGTC 7.0e-022 9.3e-025 -55.33 0.0 106 494 119 217 0.21457 3.8e-027 246 2 CCRTCTCA DREME-3 CCATCTCA 9.6e-016 1.3e-018 -41.20 0.0 75 493 61 115 0.15213 5.2e-021 246 2 DGTCTC DREME-4 WGTCTC 2.2e0000 3.0e-003 -5.82 0.0 87 495 101 381 0.17576 1.2e-005 247 2 AAHCAC DREME-5 AAHCAC 1.4e-001 1.8e-004 -8.60 0.0 235 495 251 424 0.47475 7.4e-007 247 3 M0104_1.02 (ARID3B)_(Mus_musculus)_(DBD_0.99) AWATTAATWAN 1.9e-017 2.5e-020 -45.14 0.0 62 490 161 578 0.12653 1.0e-022 244 3 M0105_1.02 (ARID3C)_(Mus_musculus)_(DBD_0.87) NTTTDATHN 2.6e-004 3.5e-007 -14.86 0.0 74 492 137 552 0.15041 1.4e-009 245 3 M0398_1.02 (ZSCAN10)_(Mus_musculus)_(DBD_0.82) NGDRAGTGCNN 1.3e-003 1.7e-006 -13.27 0.0 148 490 228 546 0.30204 7.1e-009 244 3 M0424_1.02 (SNAI3)_(Mus_musculus)_(DBD_0.75) NNTGACAKNN 7.8e-003 1.0e-005 -11.47 0.0 141 491 232 593 0.28717 4.3e-008 245 3 M0436_1.02 (ZNF35)_(Mus_musculus)_(DBD_0.96) TTRTTKDHYN 1.7e-031 2.2e-034 -77.48 0.0 55 491 181 595 0.11202 9.1e-037 245 3 M0442_1.02 (ZBTB3)_(Mus_musculus)_(DBD_1.00) NNTGCAGYG 1.2e-002 1.7e-005 -11.00 0.0 204 492 312 597 0.41463 6.8e-008 245 3 M0633_1.02 DMRT2 KAATKTATWN 8.0e-045 1.1e-047 -108.15 0.0 45 491 182 589 0.09165 4.4e-050 245 3 M0718_1.02 FOXK1 DNRTMAACAH 2.6e-004 3.5e-007 -14.86 0.0 137 491 235 599 0.27902 1.4e-009 245 3 M0719_1.02 FOXG1 RTAAACAW 3.2e-010 4.3e-013 -28.47 0.0 103 493 207 592 0.20892 1.8e-015 246 3 M0728_1.02 (FOXJ1)_(Mus_musculus)_(DBD_1.00) NRTAAACAAANN 3.2e-027 4.3e-030 -67.63 0.0 59 489 181 596 0.12065 1.7e-032 244 3 M0736_1.02 (FOXK2)_(Mus_musculus)_(DBD_0.90) RTAAACAA 1.6e-006 2.1e-009 -19.96 0.0 105 493 199 598 0.21298 8.7e-012 246 3 M0737_1.02 (FOXB2)_(Mus_musculus)_(DBD_0.94) WRWGTAAAYA 1.2e-068 1.6e-071 -163.04 0.0 47 491 223 599 0.09572 6.4e-074 245 3 M0747_1.02 (FOXL2)_(Mus_musculus)_(DBD_0.70) WNNRTAAAYA 1.0e-051 1.4e-054 -124.02 0.0 67 491 239 599 0.13646 5.6e-057 245 3 M0890_1.02 LHX6 NYAATCAN 9.6e0000 1.3e-002 -4.35 0.0 331 493 429 575 0.67140 5.3e-005 246 3 M0894_1.02 LBX1 TTAATTAG 2.4e-003 3.3e-006 -12.64 0.0 191 493 270 531 0.38742 1.3e-008 246 3 M0896_1.02 VENTX TTAATTAG 7.4e-002 9.8e-005 -9.23 0.0 275 493 336 504 0.55781 4.0e-007 246 3 M0897_1.02 HOXB13 DTTWAYDRBN 2.2e-001 3.0e-004 -8.11 0.0 145 491 217 558 0.29532 1.2e-006 245 3 M0900_1.02 SHOX HTAATTRV 5.1e0000 6.8e-003 -4.98 0.0 391 493 502 584 0.79310 2.8e-005 246 3 M0905_1.02 (HOXA4)_(Mus_musculus)_(DBD_1.00) HTAATKRNN 9.8e-003 1.3e-005 -11.25 0.0 206 492 245 450 0.41870 5.3e-008 245 3 M0906_1.02 (VTN)_(Mus_musculus)_(DBD_0.79) NMTTAATTAR 1.8e-004 2.4e-007 -15.24 0.0 131 491 191 486 0.26680 9.8e-010 245 3 M0931_1.02 (LHX1)_(Mus_musculus)_(DBD_1.00) TAATTRNNN 5.5e0000 7.3e-003 -4.92 0.0 402 492 499 567 0.81707 3.0e-005 245 3 M0949_1.02 (AC012531.1)_(Mus_musculus)_(DBD_1.00) NTAATDR 2.8e0000 3.8e-003 -5.58 0.0 212 494 198 368 0.42915 1.5e-005 246 3 M0958_1.02 (LHX4)_(Mus_musculus)_(DBD_1.00) BYAATYW 1.4e0000 1.9e-003 -6.28 0.0 376 494 489 585 0.76113 7.6e-006 246 3 M0961_1.02 (BARHL1)_(Mus_musculus)_(DBD_1.00) NTAAWYGNN 1.3e-001 1.7e-004 -8.65 0.0 264 492 338 527 0.53659 7.1e-007 245 3 M0999_1.02 (NKX6-1)_(Mus_musculus)_(DBD_1.00) NWTAATKRN 5.1e-004 6.9e-007 -14.19 0.0 168 492 247 530 0.34146 2.8e-009 245 3 M1012_1.02 (HOXB4)_(Mus_musculus)_(DBD_1.00) NTAATKRNN 6.1e-002 8.2e-005 -9.41 0.0 206 492 258 485 0.41870 3.3e-007 245 3 M1025_1.02 (HOXD1)_(Mus_musculus)_(DBD_0.98) NNYVATTA 4.6e-001 6.1e-004 -7.40 0.0 153 493 153 359 0.31034 2.5e-006 246 3 M1027_1.02 (HOXA6)_(Mus_musculus)_(DBD_1.00) WTAATKRBN 8.0e-004 1.1e-006 -13.75 0.0 208 492 273 494 0.42276 4.4e-009 245 3 M1030_1.02 (NKX2-3)_(Mus_musculus)_(DBD_1.00) NVYACTTVD 8.8e-001 1.2e-003 -6.75 0.0 298 492 414 596 0.60569 4.8e-006 245 3 M1039_1.02 (ENSG00000229544)_(Mus_musculus)_(DBD_1.00) NNTAATDRN 1.1e0000 1.5e-003 -6.50 0.0 392 492 476 547 0.79675 6.2e-006 245 3 M1070_1.02 (HOXC5)_(Mus_musculus)_(DBD_1.00) NTAATKRNN 8.1e-003 1.1e-005 -11.43 0.0 276 492 314 459 0.56098 4.4e-008 245 3 M1071_1.02 (HOXD3)_(Mus_musculus)_(DBD_1.00) NTAATKRN 8.8e-001 1.2e-003 -6.74 0.0 201 493 253 498 0.40771 4.8e-006 246 3 M1157_1.02 (HOXB9)_(PBM_CONSTRUCTS)_(DBD_1.00) WTTWATKRBN 1.7e-008 2.2e-011 -24.52 0.0 177 491 269 517 0.36049 9.1e-014 245 3 M1163_1.02 (NKX6-3)_(PBM_CONSTRUCTS)_(DBD_1.00) NWTAATKRN 9.0e-006 1.2e-008 -18.23 0.0 168 492 242 500 0.34146 4.9e-011 245 3 M1582_1.02 (HMG20B)_(Mus_musculus)_(DBD_0.94) NWAWATAATWN 7.8e-019 1.0e-021 -48.31 0.0 62 490 161 562 0.12653 4.3e-024 244 3 M1589_1.02 (SOX30)_(Mus_musculus)_(DBD_1.00) NNDNRACAAT 3.3e0000 4.4e-003 -5.43 0.0 297 491 409 595 0.60489 1.8e-005 245 3 M1668_1.02 PRKRIR NYCVNVSKRNNN 1.9e-001 2.5e-004 -8.29 0.0 153 489 237 581 0.31288 1.0e-006 244 3 M2267_1.02 CDX2 TTTTATKRCHB 6.2e-004 8.3e-007 -14.01 0.0 80 490 143 546 0.16327 3.4e-009 244 3 M2278_1.02 FOS DVTGASTCATB 2.9e-003 3.9e-006 -12.46 0.0 346 490 433 533 0.70612 1.6e-008 244 3 M2283_1.02 FOXP1 HWWADGTAAACAAAR 2.0e-037 2.6e-040 -91.13 0.0 60 486 202 594 0.12346 1.1e-042 242 3 M2287_1.02 (HOXC9)_(Mus_musculus)_(DBD_0.98) RGCMATAAATCAB 7.4e-006 9.9e-009 -18.44 0.0 56 488 112 516 0.11475 4.1e-011 243 3 M2292_1.02 JUND DRTGASTCATS 5.4e-005 7.2e-008 -16.45 0.0 342 490 413 504 0.69796 2.9e-010 244 3 M2385_1.02 FOXP2 RWGTAAACAVR 3.8e-028 5.1e-031 -69.74 0.0 52 490 169 591 0.10612 2.1e-033 244 3 M2388_1.02 SREBF2 RTGGGGTGAY 9.8e0000 1.3e-002 -4.33 0.0 245 491 324 556 0.49898 5.4e-005 245 3 M4452_1.02 BATF TYYYRWWATGASTCA 5.2e-003 6.9e-006 -11.88 0.0 102 486 171 553 0.20988 2.9e-008 242 3 M4467_1.02 MEF2C DDKCYAAAAATAGMH 3.3e-003 4.4e-006 -12.34 0.0 78 486 146 581 0.16049 1.8e-008 242 3 M4526_1.02 SMARCC1 DSRVDGTGASTCAKV 1.3e-005 1.7e-008 -17.86 0.0 296 486 391 526 0.60905 7.2e-011 242 3 M4551_1.02 ZNF274 YTCAYACTGGAGAGAAA 1.9e-005 2.5e-008 -17.49 0.0 142 484 142 302 0.29339 1.0e-010 241 3 M4565_1.02 FOSL2 VDGGATGASTCAYH 2.4e-006 3.2e-009 -19.56 0.0 331 487 425 524 0.67967 1.3e-011 243 3 M4567_1.02 FOXA2 NMWRWGTAAACANNN 7.6e-022 1.0e-024 -55.25 0.0 64 486 180 597 0.13169 4.2e-027 242 3 M4572_1.02 MAFF TGCTGACTCAGCAWW 1.4e0000 1.9e-003 -6.28 0.0 288 486 325 471 0.59259 7.7e-006 242 3 M4619_1.02 FOSL1 BGGTGASTCAT 1.3e-007 1.7e-010 -22.51 0.0 340 490 421 506 0.69388 6.9e-013 244 3 M4623_1.02 JUNB NDRTGASTCATNYHY 5.4e-008 7.2e-011 -23.36 0.0 346 486 447 528 0.71193 3.0e-013 242 3 M4629_1.02 NFE2 VRTGACTCAGCANWWYB 6.5e-006 8.7e-009 -18.57 0.0 266 484 321 459 0.54959 3.6e-011 241 3 M4681_1.02 BACH2 TGCTGAGTCA 2.5e-007 3.3e-010 -21.83 0.0 305 491 363 469 0.62118 1.4e-012 245 3 M4692_1.02 SIX5 ACTACAAYTC 8.7e0000 1.2e-002 -4.46 0.0 113 491 136 433 0.23014 4.7e-005 245 3 M4698_1.02 HNF4A BTGRMCTTTGVHCYB 6.7e-004 8.9e-007 -13.93 0.0 150 486 235 551 0.30864 3.7e-009 242 3 M5287_1.02 ALX4 HTAATYNAATTAN 2.2e-062 2.9e-065 -148.60 0.0 46 488 209 580 0.09426 1.2e-067 243 3 M5291_1.02 ARX YTAATTNRATTAN 2.3e-081 3.0e-084 -192.31 0.0 46 488 228 556 0.09426 1.2e-086 243 3 M5293_1.02 ATF7 NKATGACGTCATHN 7.2e0000 9.6e-003 -4.65 0.0 159 487 114 255 0.32649 4.0e-005 243 3 M5294_1.02 BARHL2 NHTAAAYGNT 3.5e-006 4.7e-009 -19.17 0.0 59 491 121 545 0.12016 1.9e-011 245 3 M5310_1.02 BSX NTAATBRS 1.3e-002 1.8e-005 -10.95 0.0 181 493 250 520 0.36714 7.2e-008 246 3 M5322_1.02 CPEB1 TTTTTATT 2.0e-012 2.7e-015 -33.53 0.0 67 493 160 597 0.13590 1.1e-017 246 3 M5335_1.02 CUX2 ATCGATAHNWTTATYGAT 4.5e-122 6.0e-125 -286.04 0.0 51 483 193 263 0.10559 2.5e-127 241 3 M5348_1.02 DRGX NTAATYHAATTAN 1.5e-050 2.0e-053 -121.34 0.0 42 488 179 553 0.08607 8.2e-056 243 3 M5349_1.02 DUXA NTRAYYTAATCAN 1.6e-001 2.1e-004 -8.45 0.0 260 488 335 526 0.53279 8.8e-007 243 3 M5377_1.02 ELF4 AACCCGGAAGTR 9.4e0000 1.3e-002 -4.38 0.0 291 489 287 417 0.59509 5.2e-005 244 3 M5388_1.02 EMX2 NYTAATTAVB 9.8e0000 1.3e-002 -4.34 0.0 421 491 518 568 0.85743 5.4e-005 245 3 M5427_1.02 EVX1 SNTAATTABB 1.1e-001 1.4e-004 -8.86 0.0 423 491 543 586 0.86151 5.8e-007 245 3 M5428_1.02 EVX2 NNTAATKABB 2.4e0000 3.3e-003 -5.72 0.0 423 491 537 584 0.86151 1.3e-005 245 3 M5446_1.02 FOXD4L2 RTAAACA 1.7e-046 2.2e-049 -112.02 0.0 48 494 192 598 0.09717 9.1e-052 246 3 M5460_1.02 FOXL1 RTAAACA 2.6e-062 3.5e-065 -148.42 0.0 48 494 215 597 0.09717 1.4e-067 246 3 M5501_1.02 GSC2 NYTAATCCBH 7.2e0000 9.6e-003 -4.64 0.0 327 491 436 588 0.66599 4.0e-005 245 3 M5502_1.02 GSX1 NBTAATKRSN 1.9e-001 2.5e-004 -8.30 0.0 169 491 243 547 0.34420 1.0e-006 245 3 M5503_1.02 GSX2 DYTAATKRVN 1.3e-003 1.7e-006 -13.26 0.0 169 491 254 548 0.34420 7.1e-009 245 3 M5518_1.02 HMX1 NDTTAATTGNT 1.1e-002 1.5e-005 -11.13 0.0 228 490 334 579 0.46531 6.0e-008 244 3 M5519_1.02 HMX2 NDTTAAKTGBT 1.8e0000 2.4e-003 -6.05 0.0 238 490 332 577 0.48571 9.7e-006 244 3 M5520_1.02 HMX3 BNTTAAKTGNY 4.0e-003 5.3e-006 -12.14 0.0 250 490 367 588 0.51020 2.2e-008 244 3 M5530_1.02 HOMEZ TWTAATCGTTTT 8.0e0000 1.1e-002 -4.54 0.0 7 489 19 455 0.01431 4.4e-005 244 3 M5541_1.02 HOXB2 NNTAATKANN 1.3e-001 1.7e-004 -8.68 0.0 421 491 540 585 0.85743 6.9e-007 245 3 M5542_1.02 HOXB3 NYTAATKRNN 3.9e0000 5.3e-003 -5.25 0.0 421 491 532 582 0.85743 2.1e-005 245 3 M5544_1.02 HOXC10 DTTTWATKDB 1.1e-020 1.4e-023 -52.62 0.0 99 491 233 599 0.20163 5.7e-026 245 3 M5547_1.02 HOXC11 DRTCRTWAAAH 1.8e0000 2.4e-003 -6.02 0.0 174 490 228 509 0.35510 9.9e-006 244 3 M5551_1.02 HOXC12 TTTTATTRC 1.3e0000 1.7e-003 -6.38 0.0 102 492 169 596 0.20732 7.0e-006 245 3 M5553_1.02 HOXC13 CYAATAAAAH 1.5e-004 2.1e-007 -15.39 0.0 65 491 133 595 0.13238 8.4e-010 245 3 M5555_1.02 HOXD11 RTCGTAAAAH 5.7e-003 7.6e-006 -11.79 0.0 101 491 155 499 0.20570 3.1e-008 245 3 M5557_1.02 HOXD12 GTAATAAAA 4.3e0000 5.7e-003 -5.17 0.0 412 492 534 595 0.83740 2.3e-005 245 3 M5583_1.02 ISL2 YTAAKTGC 7.0e-005 9.4e-008 -16.18 0.0 157 493 263 597 0.31846 3.8e-010 246 3 M5584_1.02 ISX YTAATCTAATTAR 5.7e-069 7.6e-072 -163.76 0.0 48 488 207 510 0.09836 3.1e-074 243 3 M5587_1.02 JDP2 ATGASTCAT 1.7e0000 2.2e-003 -6.10 0.0 348 492 352 441 0.70732 9.2e-006 245 3 M5604_1.02 LMX1A YTAATTAA 4.4e-008 5.9e-011 -23.56 0.0 155 493 243 519 0.31440 2.4e-013 246 3 M5605_1.02 LMX1B TTAATTRN 1.7e-008 2.2e-011 -24.52 0.0 79 493 166 591 0.16024 9.1e-014 246 3 M5621_1.02 MEIS3 SCTGTCAH 5.4e-002 7.2e-005 -9.54 0.0 137 493 222 595 0.27789 2.9e-007 246 3 M5623_1.02 MEOX1 VSTAATTAHC 3.4e-003 4.5e-006 -12.31 0.0 159 491 234 533 0.32383 1.8e-008 245 3 M5624_1.02 MEOX2 DSTAATTAWN 6.3e-007 8.4e-010 -20.90 0.0 277 491 389 550 0.56415 3.4e-012 245 3 M5631_1.02 MIXL1 NBTAATTRNN 6.5e0000 8.7e-003 -4.74 0.0 391 491 494 573 0.79633 3.6e-005 245 3 M5635_1.02 MNX1 TTTAATTRNH 2.5e-006 3.3e-009 -19.53 0.0 171 491 267 546 0.34827 1.4e-011 245 3 M5637_1.02 MSX1 TAATTGSWWTTTAATTRS 3.1e-004 4.1e-007 -14.71 0.0 65 483 113 480 0.13458 1.7e-009 241 3 M5697_1.02 ONECUT3 DTTATYGATTTTTT 4.5e-069 6.0e-072 -164.00 0.0 65 487 239 512 0.13347 2.5e-074 243 3 M5709_1.02 PAX7 WAATYRATTA 2.2e-001 2.9e-004 -8.15 0.0 261 491 271 419 0.53157 1.2e-006 245 3 M5711_1.02 PAX9 KKCASTCAWGCGTGACS 4.2e-001 5.6e-004 -7.48 0.0 182 484 123 234 0.37603 2.3e-006 241 3 M5714_1.02 PHOX2A TAATYYAATTA 3.0e-045 3.9e-048 -109.15 0.0 42 490 174 571 0.08571 1.6e-050 244 3 M5715_1.02 PHOX2B TAATYYAATTA 2.9e-037 3.9e-040 -90.74 0.0 42 490 162 574 0.08571 1.6e-042 244 3 M5740_1.02 POU4F1 ATGMATAATTAATG 2.7e-074 3.6e-077 -176.01 0.0 47 487 223 562 0.09651 1.5e-079 243 3 M5743_1.02 POU4F3 RTGMATWATTAATGAV 5.7e-063 7.6e-066 -149.94 0.0 45 485 202 553 0.09278 3.2e-068 242 3 M5753_1.02 PROX1 YAAGACGYCTTA 1.2e-004 1.5e-007 -15.68 0.0 93 489 92 260 0.19018 6.3e-010 244 3 M5941_1.02 UNCX NTAATYBAATTAN 1.0e-021 1.4e-024 -54.95 0.0 46 488 145 590 0.09426 5.6e-027 243 3 M5972_1.02 ZNF410 GANTATTATGGGATGKM 7.1e0000 9.5e-003 -4.65 0.0 90 484 45 136 0.18595 4.0e-005 241 3 M5973_1.02 ZSCAN16 AGGTGTTCTGTTAACACT 9.2e0000 1.2e-002 -4.40 0.0 369 483 102 112 0.76398 5.1e-005 241 3 M5998_1.02 (CREB5)_(Mus_musculus)_(DBD_1.00) DRTGACGTCATN 1.3e0000 1.8e-003 -6.32 0.0 159 489 144 326 0.32515 7.4e-006 244 3 M6114_1.02 FOXA1 WAWGYAAAYA 2.9e-068 3.8e-071 -162.14 0.0 65 491 260 597 0.13238 1.6e-073 245 3 M6141_1.02 ALX1 TAATBYAATTAY 4.9e-011 6.5e-014 -30.36 0.0 43 489 115 580 0.08793 2.7e-016 244 3 M6146_1.02 TFAP2D ACGNGCCBCRGGCK 5.8e0000 7.7e-003 -4.86 0.0 323 487 264 346 0.66324 3.2e-005 243 3 M6147_1.02 ARID3A TWWAWTTTGATWYYVWTTAATH 8.8e-079 1.2e-081 -186.35 0.0 49 479 229 537 0.10230 4.9e-084 239 3 M6167_1.02 CDX1 HCATAAAD 1.2e0000 1.6e-003 -6.41 0.0 373 493 481 578 0.75659 6.7e-006 246 3 M6187_1.02 DDIT3 GGGGATTGCABBB 1.1e-001 1.5e-004 -8.83 0.0 218 488 307 557 0.44672 6.0e-007 243 3 M6225_1.02 MECOM WAGAYAAGATAANAKW 9.2e0000 1.2e-002 -4.40 0.0 165 485 198 461 0.34021 5.1e-005 242 3 M6228_1.02 FOSB CTGACTCAYV 4.0e0000 5.3e-003 -5.24 0.0 343 491 451 582 0.69857 2.2e-005 245 3 M6234_1.02 FOXA3 RVWAARYAAAYAD 3.3e-077 4.4e-080 -182.73 0.0 64 488 271 597 0.13115 1.8e-082 243 3 M6235_1.02 FOXC1 CYWAAGTAAACAWHG 4.0e-020 5.4e-023 -51.28 0.0 62 486 161 539 0.12757 2.2e-025 242 3 M6237_1.02 FOXD3 AAACAAACA 3.3e-065 4.4e-068 -155.10 0.0 46 492 215 594 0.09350 1.8e-070 245 3 M6238_1.02 FOXF1 WAAATAAACAW 1.2e-084 1.6e-087 -199.85 0.0 66 490 283 592 0.13469 6.6e-090 244 3 M6239_1.02 FOXF2 HWADGTAAACA 1.7e-062 2.2e-065 -148.87 0.0 68 490 257 596 0.13878 9.1e-068 244 3 M6241_1.02 FOXJ2 WAAAYAAAYA 1.9e-089 2.5e-092 -210.91 0.0 41 491 234 596 0.08350 1.0e-094 245 3 M6242_1.02 FOXJ3 TAAACAWWAAMMA 4.6e-027 6.1e-030 -67.26 0.0 52 488 164 575 0.10656 2.5e-032 243 3 M6244_1.02 FOXM1 RWAAWCAMWCAAV 2.4e-027 3.2e-030 -67.93 0.0 66 488 194 598 0.13525 1.3e-032 243 3 M6245_1.02 FOXO1 AAAWWVWAAACAAVHH 1.2e-048 1.6e-051 -116.93 0.0 51 485 203 595 0.10515 6.8e-054 242 3 M6246_1.02 FOXO3 MKGWAAACAARYM 2.9e-035 3.9e-038 -86.14 0.0 62 488 202 597 0.12705 1.6e-040 243 3 M6247_1.02 FOXO4 MRTAAACAA 3.1e-024 4.2e-027 -60.74 0.0 56 492 169 597 0.11382 1.7e-029 245 3 M6250_1.02 FOXQ1 AAATAAACAATD 1.1e-050 1.4e-053 -121.68 0.0 53 489 202 560 0.10838 5.9e-056 244 3 M6256_1.02 GATA4 RSWGATAAV 2.0e0000 2.6e-003 -5.95 0.0 174 492 253 573 0.35366 1.1e-005 245 3 M6258_1.02 GATA6 NWGATAA 1.0e-001 1.4e-004 -8.88 0.0 172 494 260 583 0.34818 5.7e-007 246 3 M6262_1.02 GFI1B WGCAGTGATTT 7.6e-003 1.0e-005 -11.50 0.0 298 490 411 574 0.60816 4.2e-008 244 3 M6263_1.02 GFI1 RCWSTGATTT 4.0e0000 5.3e-003 -5.23 0.0 313 491 424 590 0.63747 2.2e-005 245 3 M6269_1.02 HBP1 AYYCATTGA 2.1e0000 2.8e-003 -5.88 0.0 310 492 393 549 0.63008 1.1e-005 245 3 M6276_1.02 HINFP DMSHHMGCGGACGTTV 5.9e-003 7.9e-006 -11.75 0.0 233 485 180 280 0.48041 3.2e-008 242 3 M6285_1.02 ONECUT1 WWTATTGATTTWDH 4.2e-070 5.6e-073 -166.36 0.0 63 487 251 565 0.12936 2.3e-075 243 3 M6289_1.02 HOXA9 WCATAAAYYATH 1.3e-016 1.8e-019 -43.17 0.0 73 489 178 582 0.14928 7.3e-022 244 3 M6290_1.02 HOXA13 CCAATAAWAHC 1.9e-002 2.6e-005 -10.57 0.0 316 490 432 579 0.64490 1.0e-007 244 3 M6293_1.02 HOXA7 KCCAATCKATYGAKB 2.7e-004 3.6e-007 -14.83 0.0 282 486 401 571 0.58025 1.5e-009 242 3 M6296_1.02 HOXB6 KKCATMAATCAWT 1.8e-001 2.4e-004 -8.33 0.0 210 488 220 400 0.43033 1.0e-006 243 3 M6297_1.02 HOXB7 MATYAATCAA 6.0e-055 8.0e-058 -131.47 0.0 43 491 186 551 0.08758 3.3e-060 245 3 M6298_1.02 HOXB8 BMATTAATCAA 1.9e-045 2.5e-048 -109.61 0.0 62 490 207 543 0.12653 1.0e-050 244 3 M6299_1.02 HOXC6 AAAGTAATAAATCAT 2.5e-092 3.4e-095 -217.52 0.0 56 486 235 453 0.11523 1.4e-097 242 3 M6301_1.02 HOXD10 AATTAAARCA 3.6e-011 4.7e-014 -30.68 0.0 111 491 222 592 0.22607 1.9e-016 245 3 M6304_1.02 HOXD9 HMATNAAWYT 1.8e-004 2.5e-007 -15.22 0.0 81 491 150 565 0.16497 1.0e-009 245 3 M6328_1.02 LHX2 YRSDTTYAATWAG 2.1e-003 2.8e-006 -12.80 0.0 198 488 291 555 0.40574 1.1e-008 243 3 M6329_1.02 LHX3 AAAATTAATTARY 4.7e-038 6.3e-041 -92.56 0.0 66 488 197 525 0.13525 2.6e-043 243 3 M6343_1.02 MEIS1 CDTWAAVCTGTCA 1.8e-002 2.4e-005 -10.65 0.0 354 488 423 513 0.72541 9.7e-008 243 3 M6348_1.02 MTF1 MGKGCCGTGTGCAAADS 1.0e-004 1.4e-007 -15.80 0.0 170 484 195 386 0.35124 5.7e-010 241 3 M6359_1.02 NFE2L1 NATGACD 1.0e0000 1.3e-003 -6.61 0.0 348 494 458 582 0.70445 5.5e-006 246 3 M6360_1.02 NFE2L2 VRTGACTCAGCA 6.6e-001 8.8e-004 -7.03 0.0 281 489 392 589 0.57464 3.6e-006 244 3 M6368_1.02 NFIL3 VKVMRTTACRTAAY 4.9e0000 6.5e-003 -5.03 0.0 119 487 130 384 0.24435 2.7e-005 243 3 M6374_1.02 NKX2-1 STCAAGKGCH 7.5e-001 1.0e-003 -6.91 0.0 157 491 243 595 0.31976 4.1e-006 245 3 M6375_1.02 NKX2-2 HAAVYACTTRAM 8.3e-002 1.1e-004 -9.11 0.0 245 489 345 570 0.50102 4.5e-007 244 3 M6376_1.02 NKX2-5 TYAAGTG 6.2e0000 8.3e-003 -4.79 0.0 308 494 420 598 0.62348 3.4e-005 246 3 M6377_1.02 NKX2-8 TTCAAGKRC 4.4e0000 5.9e-003 -5.13 0.0 230 492 320 578 0.46748 2.4e-005 245 3 M6378_1.02 NKX3-1 WWTAAGTATWTWW 5.4e-085 7.2e-088 -200.65 0.0 48 488 241 573 0.09836 3.0e-090 243 3 M6380_1.02 NOBOX HTAATTRSY 1.1e0000 1.5e-003 -6.49 0.0 278 492 364 554 0.56504 6.2e-006 245 3 M6399_1.02 ONECUT2 DKSWTKWTATKGATTTTWYYT 1.0e-076 1.4e-079 -181.58 0.0 48 480 217 509 0.10000 5.8e-082 239 3 M6400_1.02 OTX1 BTAATCCT 6.0e-002 8.1e-005 -9.42 0.0 317 493 434 587 0.64300 3.3e-007 246 3 M6401_1.02 OTX2 HYYTAATCCBWKHDM 4.9e-002 6.5e-005 -9.64 0.0 314 486 423 567 0.64609 2.7e-007 242 3 M6406_1.02 PAX2 RHTCAGTSAYGMGTGAYW 8.1e-002 1.1e-004 -9.13 0.0 353 483 457 557 0.73085 4.5e-007 241 3 M6411_1.02 PAX8 BTVAYTSRMGYRKR 7.9e-001 1.1e-003 -6.86 0.0 317 487 432 586 0.65092 4.3e-006 243 3 M6413_1.02 PBX2 VMATCAATCAMWTYM 1.8e-008 2.5e-011 -24.43 0.0 54 486 127 579 0.11111 1.0e-013 242 3 M6415_1.02 PDX1 CTAATTACY 9.7e-004 1.3e-006 -13.55 0.0 188 492 248 484 0.38211 5.3e-009 245 3 M6418_1.02 PITX2 DBTAATCCMA 3.1e-001 4.2e-004 -7.79 0.0 335 491 456 593 0.68228 1.7e-006 245 3 M6426_1.02 POU3F2 CATRAATWWT 1.8e-052 2.4e-055 -125.77 0.0 43 491 190 594 0.08758 9.7e-058 245 3 M6427_1.02 POU4F2 MARCTCATTAATR 3.6e-001 4.8e-004 -7.64 0.0 138 488 188 495 0.28279 2.0e-006 243 3 M6438_1.02 PROP1 RASHAATTAAHWTVR 2.2e-008 3.0e-011 -24.24 0.0 56 486 127 563 0.11523 1.2e-013 242 3 M6440_1.02 PRRX2 YTAATTR 7.9e0000 1.1e-002 -4.55 0.0 392 494 479 558 0.79352 4.3e-005 246 3 M6471_1.02 SOX13 YATTGTTY 1.0e0000 1.4e-003 -6.58 0.0 243 493 344 589 0.49290 5.6e-006 246 3 M6510_1.02 TEF TGTTTATRTAAMTK 3.6e-009 4.9e-012 -26.05 0.0 153 487 268 574 0.31417 2.0e-014 243 3 M6546_1.02 ZFHX3 ATTAWTAATTA 1.1e-071 1.4e-074 -170.04 0.0 56 490 234 548 0.11429 5.8e-077 244 ## # Detailed descriptions of columns in this file: # # db: The name of the database (file name) that contains the motif. # id: A name for the motif that is unique in the motif database file. # alt: An alternate name of the motif that may be provided # in the motif database file. # consensus: A consensus sequence computed from the motif. # E-value: The expected number motifs that would have least one. # region as enriched for best matches to the motif as the reported region. # The E-value is the p-value multiplied by the number of motifs in the # input database(s). # adj_p-value: The probability that any tested region would be as enriched for # best matches to this motif as the reported region is. # By default the p-value is calculated by using the one-tailed binomial # test on the number of sequences with a match to the motif # that have their best match in the reported region, corrected for # the number of regions and score thresholds tested. # The test assumes that the probability that the best match in a sequence # falls in the region is the region width divided by the # number of places a motif # can align in the sequence (sequence length minus motif width plus 1). # When CentriMo is run in discriminative mode with a negative # set of sequences, the p-value of a region is calculated # using the Fisher exact test on the # enrichment of best matches in the positive sequences relative # to the negative sequences, corrected # for the number of regions and score thresholds tested. # The test assumes that the probability that the best match (if any) # falls into a given region # is the same for all positive and negative sequences. # log_adj_p-value: Log of adjusted p-value. # bin_location: Location of the center of the most enriched region. # bin_width: The width (in sequence positions) of the most enriched region. # A best match to the motif is counted as being in the region if the # center of the motif falls in the region. # total_width: The window maximal size which can be reached for this motif: # rounded(sequence length - motif length +1)/2 # sites_in_bin: The number of (positive) sequences whose best match to the motif # falls in the reported region. # Note: This number may be less than the number of # (positive) sequences that have a best match in the region. # The reason for this is that a sequence may have many matches that score # equally best. # If n matches have the best score in a sequence, 1/n is added to the # appropriate bin for each match. # total_sites: The number of sequences containing a match to the motif # above the score threshold. # p_success: The probability of falling in the enriched window: # bin width / total width # p-value: The uncorrected p-value before it gets adjusted to the # number of multiple tests to give the adjusted p-value. # mult_tests: This is the number of multiple tests (n) done for this motif. # It was used to correct the original p-value of a region for # multiple tests using the formula: # p' = 1 - (1-p)^n where p is the uncorrected p-value. # The number of multiple tests is the number of regions # considered times the number of score thresholds considered. # It depends on the motif length, sequence length, and the type of # optimizations being done (central enrichment, local enrichment, # score optimization).