Database and Motifs High-scoring Motif Occurences Debugging Information



FIMO - Motif search tool

FIMO version 4.12.0, (Release date: Tue Jun 27 16:22:50 2017 -0700)

For further information on how to interpret these results or to get a copy of the FIMO software please access http://meme.nbcr.net

If you use FIMO in your research, please cite the following paper:
Charles E. Grant, Timothy L. Bailey, and William Stafford Noble, "FIMO: Scanning for occurrences of a given motif", Bioinformatics, 27(7):1017-1018, 2011. [full text]


DATABASE AND MOTIFS

DATABASE /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/GFI1B.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/GFI1B.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa
Database contains 600 sequences, 300000 residues

MOTIFS /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/MotifData/motif_databases/CIS-BP/Homo_sapiens.meme (DNA)

MOTIF WIDTH BEST POSSIBLE MATCH
M0085_1.02 10 TTGCCTGAGG
M0104_1.02 11 ATATTAATTAA
M0105_1.02 9 TTTTAATTG
M0108_1.02 11 GATAATATTGA
M0177_1.02 10 ACCATATGTT
M0178_1.02 10 AACAGCTGTT
M0189_1.02 8 GCACGTGA
M0195_1.02 10 ACCATATGGT
M0196_1.02 10 GGCACGTGTA
M0198_1.02 10 AGCCCGTGCG
M0199_1.02 13 TAACGACACGTGC
M0211_1.02 8 GCACGTGT
M0212_1.02 10 GGCACGTGCC
M0214_1.02 9 AACATATGT
M0216_1.02 10 CGCAGCTGTG
M0217_1.02 10 ACCATATGGT
M0300_1.02 10 AATGACGTCA
M0305_1.02 9 GCCACGTGT
M0307_1.02 8 ATACGTTT
M0395_1.02 8 GTACTAAT
M0396_1.02 10 AACGGTAGCA
M0398_1.02 11 AGGAAGTGCAA
M0404_1.02 10 AAGGGGGGCA
M0405_1.02 10 TGGGCGTGGC
M0408_1.02 10 ATGTGCACAT
M0413_1.02 10 GTTGCGGGAT
M0415_1.02 8 ATAACGGT
M0422_1.02 10 CCGGGGGGTC
M0424_1.02 10 TTTGACAGCT
M0428_1.02 8 AGGAGCAC
M0431_1.02 9 ACGGTAGCA
M0432_1.02 9 CGCGCGCAC
M0433_1.02 10 ATCTAGAACA
M0436_1.02 10 TTGTTTATTG
M0437_1.02 9 TATATATAT
M0442_1.02 9 AATGCAGTG
M0443_1.02 10 TGGGCGTGGC
M0594_1.02 9 ATTTGAATT
M0603_1.02 7 TTAGCGG
M0607_1.02 9 TCGTAAATA
M0608_1.02 10 GGGGGCGTAA
M0609_1.02 10 TCCCGCTGCC
M0610_1.02 9 ATCGCGTTA
M0629_1.02 11 AATGTATCAAT
M0630_1.02 10 AATGTATCAA
M0632_1.02 10 AATGTATCAA
M0633_1.02 10 TAATGTATTA
M0635_1.02 13 AACATGTATAAAA
M0714_1.02 10 AACCGGAAGT
M0718_1.02 10 ATGTAAACAA
M0719_1.02 8 GTAAACAA
M0728_1.02 12 AATAAACAAACA
M0736_1.02 8 GTAAACAA
M0737_1.02 10 TATGTAAACA
M0747_1.02 10 AATGTAAACA
M0756_1.02 9 GTAAACAAA
M0887_1.02 9 CCTAATGAG
M0890_1.02 8 GTAATCAA
M0891_1.02 10 TTAATTGGTT
M0892_1.02 10 CCTAATTACC
M0893_1.02 10 ATTAATTAAT
M0894_1.02 8 TTAATTAG
M0896_1.02 8 TTAATTAG
M0897_1.02 10 TTTTATGGGC
M0898_1.02 8 TTACGTAA
M0900_1.02 8 TTAATTGG
M0901_1.02 8 CTTGTCAA
M0905_1.02 9 TTAATTACC
M0906_1.02 10 AATTAATTAG
M0931_1.02 9 TAATTAATT
M0937_1.02 7 TGATACC
M0942_1.02 8 TTGTAATT
M0943_1.02 8 GCTAATTA
M0949_1.02 7 TTAATGA
M0952_1.02 8 TGATACCC
M0958_1.02 7 CTAATTA
M0961_1.02 9 CTAATTGGT
M0969_1.02 9 CTAATCAGC
M0975_1.02 9 TAATTAATT
M0994_1.02 9 ATGATACCC
M0996_1.02 7 GAAATCA
M0999_1.02 9 ATTAATTAC
M1007_1.02 9 TTTATGACC
M1012_1.02 9 TTAATGACT
M1016_1.02 7 GTGATAC
M1018_1.02 7 TAATTAA
M1025_1.02 8 ACTAATTA
M1027_1.02 9 TTAATTACC
M1030_1.02 9 ACCACTTAA
M1034_1.02 7 GCAATTA
M1039_1.02 9 GCTAATTGG
M1049_1.02 10 ATGATACCCC
M1070_1.02 9 TTAATGACT
M1071_1.02 8 TTAATGAC
M1073_1.02 9 TTAATGACC
M1110_1.02 10 GAGCAATAGA
M1125_1.02 10 GCTAATTGGT
M1157_1.02 10 TTTTATGACC
M1163_1.02 9 ATTAATTAC
M1266_1.02 10 GACCGAAACC
M1281_1.02 9 CTTACGCAA
M1358_1.02 9 TAACCCTAG
M1359_1.02 10 TTTTGCGCCA
M1418_1.02 8 TGGTACCA
M1432_1.02 10 ATTGACCTCT
M1458_1.02 10 ATTGACCTCG
M1507_1.02 10 AATTTTGGCT
M1528_1.02 10 CCATGGCAAC
M1529_1.02 10 CCATAGCAAC
M1545_1.02 9 CGTACGTCA
M1581_1.02 10 TTTGCTGACT
M1582_1.02 11 ATATATAATAA
M1583_1.02 8 TTCATTGA
M1589_1.02 10 GCAGAACAAT
M1592_1.02 8 AAAACAAT
M1594_1.02 10 CATTGTTTTT
M1601_1.02 9 ATTGTTTTC
M1605_1.02 10 ATTCATCTTT
M1628_1.02 11 AGGTGTGAAGA
M1668_1.02 12 TCCAAACGAGAT
M1838_1.02 15 CATTGCCTCAGGGCA
M1841_1.02 15 GAACATTCTGTTCTT
M1863_1.02 8 GTAAACAT
M1868_1.02 14 ACAGATAAGAATCT
M1871_1.02 10 TGGGTGGGGC
M1882_1.02 21 AAAGTGAAAGTGAAAGTAAAA
M1884_1.02 15 AGCTAAAAATAGCAT
M1889_1.02 10 AAGCACATGG
M1890_1.02 18 AGAGTGCTGATTGGTCCA
M1906_1.02 11 GGGGGCGGGGC
M1915_1.02 20 GCAAGGCATTATGGGAAATC
M1917_1.02 11 GGTCACGTGGC
M1919_1.02 12 CAAGATGGCGGC
M1925_1.02 11 TATTGTGCAAT
M1926_1.02 9 CAGGTGAGG
M1927_1.02 8 GCCACGTG
M1928_1.02 11 GGGAATTTCCC
M1929_1.02 15 CATGTCTGGGCATGT
M1934_1.02 20 AGGTCAGGGTGACCTGGGCC
M1950_1.02 6 GTGGAT
M1955_1.02 11 TTTCCAGGAAA
M1963_1.02 14 GGGGCCGAGGCCTG
M1968_1.02 11 TCCCTGGGGAC
M1970_1.02 6 TGCCAA
M2065_1.02 15 AGGTCAGGGTGACCT
M2264_1.02 8 GCCATCTG
M2267_1.02 11 TTTTATGGCTT
M2268_1.02 11 TATTGCACAAT
M2270_1.02 11 TAATTTAATCA
M2273_1.02 11 GGGCGGGAAGG
M2275_1.02 13 GAACCAGGAAGTG
M2277_1.02 11 ACAGGAAGTGG
M2278_1.02 11 TGTGACTCATT
M2281_1.02 11 TCCAATCCACA
M2283_1.02 15 CAAAAGTAAACAAAG
M2286_1.02 15 TGGACTTTGGACTCT
M2287_1.02 13 GGCCATAAATCAC
M2289_1.02 13 AAGATGATGTCAT
M2292_1.02 11 GGTGACTCATC
M2296_1.02 15 CTGAGTCAGCAATTT
M2299_1.02 13 AGGGACAGCTGCA
M2301_1.02 15 AAATGGACCAATCAG
M2303_1.02 15 TGACCTCTGACCTCT
M2305_1.02 11 TGCGCAGGCGC
M2306_1.02 13 TTCATTTGCATAT
M2307_1.02 15 AGAAAGTGAAAGTGA
M2310_1.02 15 CAAACCACAAACCCC
M2313_1.02 10 CCATTGTTTT
M2314_1.02 15 GGGAGGGGGCGGGGC
M2319_1.02 14 TTCCTTTGATCTTT
M2321_1.02 20 AGACATGCCCAGACATGCCC
M2323_1.02 15 CAGATCTCGCGAGAG
M2385_1.02 11 AAGTAAACAAA
M2387_1.02 10 GTGGGGTGAT
M2388_1.02 10 ATGGGGTGAT
M2390_1.02 8 CAGGAAGG
M2391_1.02 10 GGGGCGGGGC
M2392_1.02 19 GTTGCCATGGCAACCGCGG
M4344_1.02 8 GGTTGCTA
M4427_1.02 21 GTGGCCACCAGGGGGCGCTGT
M4428_1.02 14 AGAACATTCTGTTC
M4438_1.02 15 AGGTCATGGTGACCT
M4444_1.02 14 AGGGGATTTCCCAG
M4451_1.02 11 GGTCACGTGAC
M4452_1.02 15 TCTCGATATGACTCA
M4453_1.02 15 AAGAGGAAGTGAAAC
M4454_1.02 15 AAATCTCGCGAGAAC
M4459_1.02 20 GTGCGGGGGCGGGGGGGGGG
M4461_1.02 21 GCCTTCTGGGAATTGTAGTTC
M4462_1.02 11 CACCGGAAGTG
M4463_1.02 18 AATGTGGAAATGAGTCAG
M4467_1.02 15 ATGCCAAAAATAGCA
M4469_1.02 14 TCCATGGTGCTGAA
M4471_1.02 15 GCAGCCAAGCGTGAC
M4473_1.02 15 GCCGGCCAATCAGAG
M4476_1.02 15 TCATCTGTTGCTAGG
M4477_1.02 19 CTATGGCCATATAAGGCAA
M4478_1.02 20 CAGGTGATTTCCGGGAAATG
M4479_1.02 11 GCAGCAGCTGT
M4481_1.02 15 GGTCACGTGGCCCGG
M4484_1.02 15 CTGGGAATTGTAGTC
M4509_1.02 17 ATTTGCATAACAAAGGA
M4511_1.02 8 TGACCTCT
M4522_1.02 10 CCGGAAGTGG
M4525_1.02 15 AGCCTCAGGGCATGG
M4526_1.02 15 GGGGGGTGACTCATC
M4527_1.02 21 GGACTACAACTCCCAGCAGGC
M4532_1.02 10 CCACGTGCTC
M4536_1.02 15 GGGGAGGGCGCGCGG
M4537_1.02 15 GGCGGGAAATTTGAA
M4543_1.02 11 GGAACCACGTG
M4545_1.02 15 AGAAAGTGAAAGTGA
M4551_1.02 17 TTCATACTGGAGAGAAA
M4553_1.02 10 GGTCACGTGC
M4565_1.02 14 CAGGATGAGTCACC
M4567_1.02 15 GCAAAGTAAACATAG
M4569_1.02 18 GTCCCGGGTTCGAATCCC
M4572_1.02 15 TGCTGACTCAGCAAA
M4600_1.02 11 GCAGATAAGGA
M4604_1.02 21 GGGGAGGAGGGAGGGGAGGAG
M4612_1.02 15 CCGCCAGGGGGCGCC
M4619_1.02 11 GGGTGACTCAT
M4623_1.02 15 CGGTGACTCATCCTT
M4629_1.02 17 CATGACTCAGCAATTTT
M4635_1.02 15 GAAAATGAAACTGAA
M4636_1.02 21 CTGCCCTCATCAAAGATGGCG
M4640_1.02 15 GGGCAGGGGTCTCGG
M4665_1.02 15 CAGATAAGAATCTGT
M4680_1.02 8 GTCACGTG
M4681_1.02 10 TGCTGAGTCA
M4692_1.02 10 ACTACAACTC
M4698_1.02 15 CTGGACTTTGGACTC
M4702_1.02 8 TGACCTTT
M4708_1.02 10 TATGCAAATA
M4840_1.02 11 AAATGAGCAAC
M4850_1.02 21 TGTTGTGTCCGTGCCATCTGG
M4930_1.02 11 AAATCGTGACT
M4971_1.02 10 GTAACAGCTG
M5116_1.02 9 ACCACCTGT
M5209_1.02 11 GTGGGCGTGGC
M5234_1.02 10 GGTCACGTAC
M5284_1.02 10 GCTAATTAGC
M5287_1.02 13 CTAATTAAATTAA
M5291_1.02 13 TTAATTTAATTAA
M5292_1.02 13 GGATGATGCAATA
M5293_1.02 14 CGATGACGTCATCG
M5294_1.02 10 GTTAAACGGT
M5300_1.02 17 TAATCGGTATTTAATTG
M5302_1.02 14 TGATGACGTCATCA
M5303_1.02 17 TGCTTTCTAGGAATTCA
M5304_1.02 10 ACCATATGGT
M5307_1.02 12 AAACATATGTTT
M5308_1.02 10 ACCATATGTT
M5310_1.02 8 TTAATTGG
M5320_1.02 15 CCCGCATACAACGAA
M5321_1.02 10 AACACGTGTT
M5322_1.02 8 TTTTTATT
M5323_1.02 14 TGATGACGTCATCG
M5325_1.02 14 TGATGACGTGGCAT
M5335_1.02 18 ATCGATAATTTTATCGAT
M5339_1.02 10 GATAATTAGG
M5342_1.02 8 GTAATTGG
M5343_1.02 8 ATAATTAC
M5344_1.02 8 GTAATTGG
M5345_1.02 10 GTTAATCCGC
M5346_1.02 10 GCTAATCCGT
M5348_1.02 13 CTAATCTAATTAA
M5349_1.02 13 CTAATTTAATCAA
M5363_1.02 12 TTTCCCGCCAAA
M5377_1.02 12 AACCCGGAAGTG
M5388_1.02 10 GCTAATTAGC
M5390_1.02 10 GCTAATTGGG
M5394_1.02 10 GTTAATTGGA
M5398_1.02 10 ACCGGAAGTG
M5414_1.02 10 GTTAATTGGT
M5420_1.02 10 ACCGGAAGTA
M5421_1.02 11 AACCGGAAATA
M5422_1.02 10 ACCGGAAGTG
M5425_1.02 15 CCGGAAGCGGAAGTG
M5427_1.02 10 GCTAATTACC
M5428_1.02 10 GCTAATTACC
M5430_1.02 10 AACACCTGTT
M5435_1.02 14 TCGCTGTGTCATTC
M5445_1.02 14 AGTAAATATTTTTT
M5446_1.02 7 GTAAACA
M5460_1.02 7 GTAAACA
M5471_1.02 14 GTAAACATGTTTAC
M5480_1.02 10 GCTAATTAGT
M5481_1.02 10 GCTAATTGGT
M5487_1.02 10 TATGCGGGTA
M5490_1.02 16 GCTTCGTGGGGGGTCT
M5491_1.02 14 CTTCGCGGGGGGTC
M5493_1.02 8 GTACGTAA
M5497_1.02 17 AACCGGTTTAACCGGTT
M5500_1.02 10 GCTAATCCCT
M5501_1.02 10 CCTAATCCGC
M5502_1.02 10 TTTAATTAGG
M5503_1.02 10 TTTAATTAGT
M5504_1.02 12 TGGCACGTGCCG
M5506_1.02 12 TGGCACGTGCCA
M5509_1.02 10 GGCACGTGTC
M5512_1.02 9 GGTGGGCAT
M5517_1.02 10 ACTAGTTAAC
M5518_1.02 11 TTTTAATTGCT
M5519_1.02 11 TTTTAATTGGT
M5520_1.02 11 TGTTAATTGCT
M5530_1.02 12 TATAATCGTTTT
M5541_1.02 10 GTTAATTACT
M5542_1.02 10 GCTAATTAGT
M5543_1.02 10 TTTAATTATT
M5544_1.02 10 TTTTTATGGG
M5547_1.02 11 GGTCGTAAAAT
M5551_1.02 9 TTTTATTAC
M5553_1.02 10 CCAATAAAAA
M5555_1.02 10 GTCGTAAAAA
M5557_1.02 9 GTAATAAAA
M5563_1.02 10 GCTAATTAAC
M5567_1.02 13 GAACGTTCTAGAA
M5568_1.02 15 TTCGAAACGTTCGAA
M5571_1.02 10 GACAGGTGTA
M5581_1.02 12 CATGTCATGTAA
M5582_1.02 12 CATGTCATGTAA
M5583_1.02 8 TTAAGTGC
M5584_1.02 13 TTAATCTAATTAA
M5587_1.02 9 ATGACTCAT
M5591_1.02 18 CAAAAAGGGGCGTGGCAT
M5592_1.02 14 AAGGGGGCGTGGCC
M5593_1.02 11 GGGGGCGTGGC
M5594_1.02 13 CTCGACCTAATTA
M5602_1.02 8 TTAATTGG
M5604_1.02 8 TTAATTAA
M5605_1.02 8 TTAATTAA
M5616_1.02 12 GCTATAAATAGC
M5621_1.02 8 CCTGTCAA
M5623_1.02 10 GCTAATTAAC
M5624_1.02 10 AGTAATTAAC
M5627_1.02 10 CACAGGTGTT
M5628_1.02 8 AGGTGTGA
M5631_1.02 10 GTTAATTAGA
M5632_1.02 10 ATCACGTGAT
M5634_1.02 10 ACCACGTGCC
M5635_1.02 10 TTTAATTACT
M5636_1.02 10 AACAGCTGTT
M5637_1.02 18 TAATTGGTTTTTAATTGC
M5643_1.02 12 ACCGTTAAACGG
M5652_1.02 10 GCCATATGGT
M5653_1.02 10 GACATATGTT
M5660_1.02 15 TTGGCACGGTGCCAA
M5662_1.02 15 TTGGCACAGTGCCAG
M5664_1.02 15 TTGGCACCGTGCCAA
M5672_1.02 10 GCTAATTAGC
M5689_1.02 11 AATTTGCTGAC
M5690_1.02 10 AACATATGTT
M5691_1.02 10 ACCATATGTT
M5693_1.02 10 ACCATATGTT
M5697_1.02 14 ATTATTGATTTTTT
M5702_1.02 17 TGCAGTCATGCGTGACG
M5704_1.02 10 TAATCGATTA
M5705_1.02 8 CTAATTAG
M5709_1.02 10 TAATCGATTA
M5711_1.02 17 TGCAGTCATGCGTGACG
M5714_1.02 11 TAATTTAATTA
M5715_1.02 11 TAATTTAATTA
M5717_1.02 9 CTTAATCCC
M5720_1.02 9 CTTAATCCC
M5722_1.02 12 TGACACCTGTCA
M5729_1.02 9 ATTTGCATA
M5735_1.02 13 AAATTAGCATAAT
M5738_1.02 9 ATTTGCATA
M5740_1.02 14 ATGAATAATTAATG
M5743_1.02 16 ATGCATAATTAATGAG
M5744_1.02 9 ATTTGCATA
M5746_1.02 10 ATAATGAGCT
M5750_1.02 13 GGGGGCCTTGAAA
M5753_1.02 12 CAAGACGTCTTA
M5771_1.02 10 GTTAATTGGC
M5772_1.02 8 TTAATTGG
M5777_1.02 16 CGTTGCCATGGCAACG
M5782_1.02 9 GGATAATCC
M5804_1.02 15 GAGCAACAGGTGGTT
M5805_1.02 13 ATGCAACAGGTGG
M5807_1.02 8 TTAATTGG
M5815_1.02 12 ACAATAACATTG
M5825_1.02 15 AACACTACCATTGTT
M5835_1.02 16 AACAATGTTCATTGTT
M5838_1.02 16 AACAATGTGCAGTGTT
M5856_1.02 12 AGTGGGCGTGGC
M5857_1.02 11 ACCCGGATGTA
M5865_1.02 14 AAAAAGAGGAAGTA
M5873_1.02 10 AGGTGTGAAA
M5875_1.02 20 AGGTGTGAAAAAAGGTGTGA
M5880_1.02 19 AGGTGTGAAATTCACACCT
M5882_1.02 20 TTTCACACCTAGGTGTGAAA
M5883_1.02 16 TCACACCTTCACACCT
M5889_1.02 16 GGTGTGAATTCACACC
M5896_1.02 8 AGGTGTGA
M5903_1.02 12 AAAGATCAAAGG
M5932_1.02 10 GTCACGTGAT
M5934_1.02 12 TGACAGCTGTCA
M5935_1.02 12 TGACAGCTGTCA
M5941_1.02 13 CTAATTTAATTAG
M5944_1.02 8 CTAATTAC
M5945_1.02 8 CTAATTAC
M5949_1.02 8 CTAATTAT
M5955_1.02 11 TAATGGCGGAC
M5958_1.02 13 TATGTCGCGATAG
M5959_1.02 17 TTTCGCCTGGCACGTCA
M5962_1.02 12 TTCGGTGGTCGC
M5965_1.02 15 GCACAGCGGGGGGTC
M5967_1.02 19 ATGTTAAATGTAGATTAAG
M5970_1.02 17 GTCGTGTTGTGGGAAAG
M5971_1.02 14 TCGAGGCTAGACCA
M5972_1.02 17 GAGTATTATGGGATGGA
M5973_1.02 18 AGGTGTTCTGTTAACACT
M5974_1.02 12 GGGTTCGAGGGT
M5976_1.02 17 TTCGTGGCATTTTTCTA
M5977_1.02 10 GTGGGGGGGG
M5979_1.02 12 TGTGGGAAAAGC
M5980_1.02 10 AGGTAGGTAC
M5981_1.02 15 TTTTCAGTGTGTGCA
M5998_1.02 12 GATGACGTCATT
M6037_1.02 12 TTTGTCATGTAG
M6111_1.02 13 AGAAAGGGTTAAT
M6114_1.02 10 AAAGCAAACA
M6115_1.02 15 CATGTCTGGGCATGT
M6119_1.02 15 AAAAAGAGGAAGTGG
M6123_1.02 15 GGGGTGGGGGAGGGG
M6131_1.02 21 CCGGTTCAAACCGGTTCTGGC
M6139_1.02 9 GCACGCAAC
M6140_1.02 18 ATTGGTTTTATTGGTTAA
M6141_1.02 12 TAATTCAATTAT
M6144_1.02 10 GCCCCCGGGC
M6146_1.02 14 ACGCGCCTCGGGCG
M6147_1.02 22 TTTAATTTGATTTCGATTAATT
M6149_1.02 13 TGTTAGTATTGTG
M6150_1.02 12 GCCTCCCACGCC
M6151_1.02 8 TCACGTGC
M6152_1.02 10 GTGACGTCAC
M6154_1.02 12 TAAGGAAGAAGG
M6155_1.02 12 GTGGTGACGTGG
M6157_1.02 10 TCATTAATTG
M6159_1.02 16 TTCCTAGAAAGCTTTT
M6161_1.02 20 ACCGGGTCACGTGCAGAAGG
M6162_1.02 14 GGGTCACGTGTCCA
M6163_1.02 12 TTTGTTGTTTTC
M6164_1.02 25 ACATAGTGACACCTAGGTGTGAAAT
M6166_1.02 15 ATTATGTTAAATCAC
M6167_1.02 8 ACATAAAT
M6171_1.02 11 AATTGTGCAAT
M6172_1.02 12 AAGATTGCGCAA
M6173_1.02 13 CAGATTGCAAAAT
M6174_1.02 11 AGCCAATCAGC
M6176_1.02 12 TGACCTTTGACC
M6180_1.02 9 GTGACGTCA
M6181_1.02 11 CACTGACGTCA
M6182_1.02 8 CTAATCCC
M6184_1.02 14 AGGGGGATCGATGG
M6185_1.02 7 CGTTGGC
M6186_1.02 11 TGTTACATAAC
M6187_1.02 13 GGGGATTGCATTT
M6188_1.02 8 ATAATTAT
M6189_1.02 10 GATAATTACA
M6191_1.02 10 GGCGCGAAAC
M6192_1.02 10 CGCGCGAAAC
M6194_1.02 10 CGCGCCAAAC
M6196_1.02 13 TAAGGCGCGAAAA
M6197_1.02 9 CGTGACGTC
M6199_1.02 11 GGCGTGGGCGG
M6200_1.02 11 AGAGTGGGTGT
M6201_1.02 11 GGCGGCAGGGC
M6204_1.02 15 TAGCAGGAAGTGAGT
M6205_1.02 14 GGCAAACAGGAAAT
M6206_1.02 11 ATAAGGAAGTA
M6207_1.02 9 ACCGGAAGT
M6208_1.02 12 CCCAGGAAGTGC
M6210_1.02 13 TGCCCACGTGGTG
M6211_1.02 14 CGGGGATACGAAAT
M6212_1.02 13 CCCACGTACGCAC
M6213_1.02 11 ACCGGAAATCC
M6215_1.02 9 TGACCTTGA
M6216_1.02 9 TGACCTTGA
M6221_1.02 11 GCGGGAAGTGG
M6222_1.02 8 CAGGAAGT
M6223_1.02 13 GACAGGAAGTAAC
M6224_1.02 17 GCCACAGGAAGTAACAC
M6225_1.02 16 AAGATAAGATAAGATA
M6226_1.02 10 CAGGAAATAA
M6228_1.02 10 CTGACTCATC
M6234_1.02 13 GCAAAGCAAACAA
M6235_1.02 15 CTTAAGTAAACAATG
M6236_1.02 15 TCTGGCAAAACAAAC
M6237_1.02 9 AAACAAACA
M6238_1.02 11 AAAATAAACAT
M6239_1.02 11 AAAAGTAAACA
M6240_1.02 12 AACCAATCAGAG
M6241_1.02 10 TAAATAAACA
M6242_1.02 13 TAAACAAAAACAA
M6244_1.02 13 AAAAACAAACAAC
M6245_1.02 16 AAAAAGTAAACAAACC
M6246_1.02 13 AGGTAAACAAACA
M6247_1.02 9 AATAAACAA
M6249_1.02 9 AAACAAATT
M6250_1.02 12 AAATAAACAATT
M6251_1.02 12 TTGTGTTTTTTT
M6256_1.02 9 ACAGATAAC
M6257_1.02 17 TAAGAGATAACTTAGAT
M6258_1.02 7 AAGATAA
M6259_1.02 14 CACATGCGGGTATT
M6262_1.02 11 TGCAGTGATTT
M6263_1.02 10 GCTGTGATTT
M6264_1.02 11 CTGGGTGGTCT
M6265_1.02 11 GTGGGTGGTCT
M6266_1.02 11 TTGGGTGGTCC
M6267_1.02 10 GTGGGGGGTA
M6268_1.02 12 AATGCCAGACGC
M6269_1.02 9 ATTCATTGA
M6270_1.02 20 AGGGACGCAGCTGCTCCCCA
M6271_1.02 13 GGGCTCGTGGCGG
M6272_1.02 16 AGGCCACGTGCCGGAT
M6273_1.02 17 GGGGGCACGTGGCATTA
M6274_1.02 9 GGGTTGCCC
M6275_1.02 12 GCGTACGTGCGG
M6276_1.02 16 GCGCTAGCGGACGTTA
M6277_1.02 13 CTGTTACATAATC
M6278_1.02 12 TAGGGCTGCAAA
M6279_1.02 7 AAAATAC
M6280_1.02 15 AATAATCGCGAATAT
M6281_1.02 15 GGTTAATTATTAACC
M6282_1.02 14 GTTAATCATTAACC
M6285_1.02 14 TTTATTGATTTTTT
M6287_1.02 14 AGAATGTTCTAGAA
M6289_1.02 12 TCATAAATTATC
M6290_1.02 11 CCAATAAAACC
M6291_1.02 10 CATCCATCAA
M6292_1.02 10 CATTAATCAA
M6293_1.02 15 TCCAATCTATTGATT
M6295_1.02 10 CCATCCATCA
M6296_1.02 13 TGCATCAATCATT
M6297_1.02 10 CATTAATCAA
M6298_1.02 11 GCATTAATCAA
M6299_1.02 15 AAAGTAATAAATCAT
M6300_1.02 14 GGGCATCAATCAAA
M6301_1.02 10 AATTAAAGCA
M6302_1.02 11 TCCCTAATAAA
M6303_1.02 8 TTAATTGA
M6304_1.02 10 TAATTAAATT
M6306_1.02 12 TGTCAGGGGGCA
M6308_1.02 14 GGAAAGTGAAAGCA
M6309_1.02 17 GGAAAGCGAAACTGAAA
M6311_1.02 20 TAAAGGAAAGCCAAAAGTGA
M6312_1.02 10 GAAAGTGAAA
M6313_1.02 15 GAGAAAGTGAAACTG
M6314_1.02 12 GAAAGCGAAACT
M6315_1.02 7 GTTAATG
M6316_1.02 9 CCAGGTGCA
M6321_1.02 17 GGCGGGGAGGTGGGGGC
M6322_1.02 11 CAGGGTGTGGC
M6323_1.02 15 TGCCTGGGTGTGGCT
M6324_1.02 10 TGGGTGGGGC
M6325_1.02 8 GGGGGCGG
M6326_1.02 9 CAGGGGGTG
M6327_1.02 7 CTTTGAT
M6328_1.02 13 CACTTTTAATTAG
M6329_1.02 13 AAAATTAATTAAT
M6330_1.02 21 GTGCTGACCCCGCAGCCTTCG
M6331_1.02 9 TGCTGACGG
M6332_1.02 8 TTGCTGAC
M6333_1.02 7 CATGACT
M6336_1.02 17 GGGGGGGGGAGGGAGGG
M6337_1.02 11 GGGGCCGGAGG
M6338_1.02 17 TACAACAACCTGTTCTT
M6339_1.02 7 CTCCGGG
M6342_1.02 12 GCTAAAAATAGC
M6343_1.02 13 CATAAAACTGTCA
M6344_1.02 13 TGACAGCTGTCAA
M6345_1.02 10 ATCACATGAC
M6346_1.02 19 CCACGGCGGTGTCACATGC
M6347_1.02 7 TAATTGT
M6348_1.02 17 AGTGCCGTGTGCAAAAC
M6349_1.02 10 TCAACCTGCA
M6350_1.02 7 CAGTTGG
M6352_1.02 8 CCACGTGG
M6353_1.02 7 GCAGCTG
M6354_1.02 9 GACAGCTGC
M6355_1.02 13 TGACAGCTGCTGC
M6356_1.02 9 GGTGGGGAA
M6357_1.02 8 TTTAATGG
M6358_1.02 12 CGGCAGATGGCC
M6359_1.02 7 AATGACT
M6360_1.02 12 CATGACTCAGCA
M6361_1.02 13 ATGGAAATTTCCA
M6363_1.02 9 AATTTTCCA
M6364_1.02 9 AGTTTTCCA
M6365_1.02 10 AAATTTTCCT
M6366_1.02 15 CATGGATTTTTCCAC
M6368_1.02 14 ATGCATTACATAAC
M6370_1.02 11 GGAATCTCCCT
M6373_1.02 14 CAGCCAATCAGCGC
M6374_1.02 10 CTCAAGTGCT
M6375_1.02 12 AAACCACTTAAA
M6376_1.02 7 TCAAGTG
M6377_1.02 9 TTCAAGGAC
M6378_1.02 13 AATAAGTATATAA
M6379_1.02 11 AGTTAAGTGGA
M6380_1.02 9 TTAATTGGT
M6381_1.02 10 TCTCCCACGC
M6382_1.02 14 TTTGACCTACTTTT
M6383_1.02 19 CGTTGACCTTTGACCTTTA
M6384_1.02 14 AGGTCATTGACCCT
M6385_1.02 19 CTGAACTTTTTTGACCTCA
M6387_1.02 18 CTGAACTTTCCTGACCCC
M6389_1.02 13 CTGACCTCTGGCC
M6391_1.02 14 TGACTTTTGACTTT
M6392_1.02 18 TCAATTGAACTTTGTCCT
M6393_1.02 9 GTGACCTTT
M6394_1.02 9 GTGACCTTT
M6395_1.02 10 CTGACCTTTG
M6396_1.02 10 TGGCCTTGAA
M6397_1.02 13 TGACCTTGAACTT
M6399_1.02 21 GTCTTGTTATTGATTTTTTTT
M6400_1.02 8 CTAATCCT
M6401_1.02 15 CTTTAATCCCTTAAC
M6402_1.02 9 TGTAACTGT
M6406_1.02 18 GTTCAGTCATGCGTGACA
M6410_1.02 11 TCAAGCGTGAA
M6411_1.02 14 GTCACTGAAGCGGG
M6412_1.02 15 CCCATCAATCAAATT
M6413_1.02 15 CCATCAATCAATTTA
M6415_1.02 9 CTAATTACC
M6416_1.02 11 TCTGTGGTTTG
M6417_1.02 13 ATATATTCATGAG
M6418_1.02 10 TTTAATCCCA
M6419_1.02 13 CATCAATCAAGCT
M6420_1.02 17 GGGGGCATCAGGAGGGG
M6422_1.02 10 CGGGGGGCCC
M6423_1.02 9 ATTTGCATA
M6425_1.02 14 TTTGCATTACAATG
M6426_1.02 10 CATAAATAAT
M6427_1.02 13 CAGCTCATTAATA
M6429_1.02 13 CATAATTTATGCA
M6430_1.02 7 TGACCTT
M6432_1.02 14 TGACCTTTGTCCTA
M6433_1.02 18 GTGACCTTTGACCTACTT
M6436_1.02 13 TACAGACTGTTCT
M6438_1.02 15 GAGTAATTAATATAA
M6439_1.02 7 TAATCTG
M6440_1.02 7 TTAATTG
M6441_1.02 21 GGACAGCTGTTCTGTTTCCTG
M6442_1.02 17 CCCTGCCCCCCCCTTCC
M6443_1.02 7 TGACCTC
M6445_1.02 11 GCCCTGACCTC
M6446_1.02 20 GTGACCTCTGGGTGACCCCC
M6448_1.02 12 GGGGGATTTCCC
M6449_1.02 12 TGGGGATTTCCC
M6451_1.02 12 GTTGCTAGGGAA
M6453_1.02 14 TTACCATGGCAACC
M6454_1.02 12 TGACCTAGTTTT
M6455_1.02 13 CTGACCTACTTTT
M6456_1.02 22 GGGGGGGGGGGTGGTTTGGGGT
M6457_1.02 10 TAACCACAAA
M6459_1.02 14 AACCACAAAACCCA
M6461_1.02 10 TGTGACCTCA
M6462_1.02 13 GTGACCTTTGACC
M6463_1.02 12 AGCCTGTCTGCC
M6464_1.02 11 GTGTCCGTCTG
M6465_1.02 10 GTGTCTGGCC
M6466_1.02 9 TGTCTGGCC
M6468_1.02 8 CCAGGTGG
M6469_1.02 7 TCAGGTG
M6470_1.02 7 TCTTTGT
M6471_1.02 8 CATTGTTC
M6472_1.02 7 CATTGTT
M6473_1.02 18 CAACAATCTTCATTGTCC
M6474_1.02 19 GGAAAAGAACAATGGGTTC
M6475_1.02 16 ATTTGCATAACAATGG
M6476_1.02 12 GAGAACAAAGCG
M6477_1.02 8 TAACAATA
M6478_1.02 11 AGAACAATGGG
M6482_1.02 20 GGGGGGGGGCGGGGCCGGGG
M6483_1.02 24 GGGGCCAGGGGGGGGGCGGGGCCG
M6485_1.02 12 AAAAAGAGGAAG
M6486_1.02 16 CGGCTGTTACCCTGGG
M6490_1.02 9 AAAACAAAA
M6491_1.02 12 TTTCCAGGAATT
M6492_1.02 13 TTTTCTAGGAATT
M6496_1.02 13 TTTCCCAGAAAAG
M6497_1.02 13 TTCCCAGGAATTT
M6498_1.02 9 TGACCTTGA
M6499_1.02 9 CGTGGGAAA
M6500_1.02 12 GACCATCTGTTC
M6503_1.02 25 GTCGCTTTTCACACCTCTGATGGCA
M6504_1.02 24 AGGTAGAGAATTAGGTGATAAAAA
M6505_1.02 8 AGGTGTGA
M6506_1.02 12 GCGCTTTGTTCT
M6507_1.02 14 CACATTCCTGCGCC
M6508_1.02 15 GATATTTCTGCTCTA
M6509_1.02 12 AAAAATAGCTCT
M6510_1.02 14 TGTTTATGTAAATG
M6513_1.02 11 GCCAGCTGCGG
M6514_1.02 16 GCCTGAACTGGCCAGA
M6515_1.02 14 AAATGGCGGGAAAC
M6516_1.02 11 GACCATCTGGT
M6517_1.02 10 GGTCATGTGG
M6518_1.02 9 GGTCACGTG
M6519_1.02 16 CAGGTGACACCTGACA
M6521_1.02 10 CTGACCTGAA
M6523_1.02 17 TGACCTGACCTGACCTC
M6525_1.02 11 CGCCAAGGAGC
M6527_1.02 10 ACCCAGGTGG
M6529_1.02 7 TTTCTGG
M6532_1.02 7 TGACCTC
M6534_1.02 11 TTAGCTAATTA
M6535_1.02 13 GCGGGGGCGGGGG
M6536_1.02 12 GACGTGTCATTA
M6537_1.02 11 GGGGATTGGCC
M6539_1.02 22 CGGAGAGGGGGAGGGGGGGGGC
M6540_1.02 15 CAATAGCGGTGGTGG
M6542_1.02 13 AGATGATAGAGCC
M6544_1.02 12 GGGGATTTCCCA
M6545_1.02 14 GGTAGGGAAACCCC
M6546_1.02 11 ATTAATAATTA
M6547_1.02 19 GAGGGCCCCAGGCCTCGGC
M6548_1.02 9 GGGGTGGTC
M6549_1.02 9 GGGGTGGTC
M6550_1.02 9 TGGGTGGTC
M6552_1.02 15 GGGGTGGGGGAGGGG
M6553_1.02 12 GAGGGGGGCGGA
M6554_1.02 14 TCCAGATGTTTCGG
M6555_1.02 9 CGATAATGA
M6556_1.02 24 GGGCAACAAATCCCTGCGCCCCGT
M6557_1.02 12 GGAAAAAATCGG
M6558_1.02 15 GCACCCTTGGGTGCC
M6559_1.02 16 CCCACGGTTACTGCCG

Random model letter frequencies (/srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/GFI1B.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/background):
A 0.280 C 0.220 G 0.220 T 0.280


SECTION I: HIGH-SCORING MOTIF OCCURENCES

Motif ID Alt ID Sequence Name Strand Start End p-value q-value Matched Sequence
M2310_1.02 RUNX2 chr19 - 34218434 34218448 1.29e-08 0.00729 CAAACCACAAAACCC
M2310_1.02 RUNX2 chr14 + 99821865 99821879 8.43e-08 0.0178 CTAACCACAGACCAC
M2310_1.02 RUNX2 chr9 + 18976913 18976927 9.44e-08 0.0178 AAAACCACAAACCAA
M2310_1.02 RUNX2 chr13 - 21949970 21949984 2.66e-07 0.0376 CAAACCACAGCAACA
M2310_1.02 RUNX2 chr1 + 8701472 8701486 4.89e-07 0.0434 AAAACCACAAAACAA
M2310_1.02 RUNX2 chr10 + 7286225 7286239 5.32e-07 0.0434 CAAACCACAAAGAAA
M2310_1.02 RUNX2 chr20 + 5582441 5582455 5.87e-07 0.0434 AAAACCACAACCAAA
M2310_1.02 RUNX2 chr17 - 1463346 1463360 6.13e-07 0.0434 GAAACCACAGAACCA
M2310_1.02 RUNX2 chr6 + 29516323 29516337 7.15e-07 0.045 aaaaccacagacact
M2310_1.02 RUNX2 chr20 - 53899668 53899682 1.14e-06 0.0645 ATAACCACAGAACAC
M2310_1.02 RUNX2 chr6 + 111591718 111591732 1.49e-06 0.077 CCAACCACAGACTCA
M2310_1.02 RUNX2 chr14 - 99821890 99821904 2.34e-06 0.108 CTAACCACAGATACA
M2310_1.02 RUNX2 chr10 + 665684 665698 2.49e-06 0.108 GAAACCACAGCGCCA
M2310_1.02 RUNX2 chr20 + 50285688 50285702 3.33e-06 0.135 GAGACCACAAAAACC
M2310_1.02 RUNX2 chr12 + 57112216 57112230 3.59e-06 0.136 aacaccacacacaca
M2310_1.02 RUNX2 chr8 + 18844641 18844655 4.05e-06 0.143 CCAACCACAACCCCT
M2310_1.02 RUNX2 chr16 + 25049530 25049544 4.77e-06 0.159 CAGACCACAAGCAGC
M2310_1.02 RUNX2 chr17 + 71163654 71163668 5.18e-06 0.163 GAAACCACAAAATCA
M2310_1.02 RUNX2 chr10 + 99551374 99551388 5.69e-06 0.166 CTCACCACAAACAGC
M2310_1.02 RUNX2 chr5 + 124665303 124665317 6.23e-06 0.166 cccaccacagagcca
M2310_1.02 RUNX2 chr1 + 232682436 232682450 6.31e-06 0.166 CTAACCACAGGCACT
M2310_1.02 RUNX2 chr4 + 76851468 76851482 6.43e-06 0.166 AAAGCCACAGCCCTC
M2310_1.02 RUNX2 chr13 - 100364080 100364094 7.1e-06 0.175 AAAACCAAAAACCCC
M2310_1.02 RUNX2 chr5 + 96629911 96629925 7.9e-06 0.181 TAAACCACAGCCAAG
M2310_1.02 RUNX2 chr15 - 75105094 75105108 8e-06 0.181 CACCCCACAACCACC
M2310_1.02 RUNX2 chr4 + 173074786 173074800 9.04e-06 0.191 GTGACCACAACCACC
M2310_1.02 RUNX2 chr1 - 184622593 184622607 1.04e-05 0.191 TAGACCACAACACCA
M2310_1.02 RUNX2 chr10 + 113056265 113056279 1.05e-05 0.191 ctgaccacaaagctc
M2310_1.02 RUNX2 chr1 - 183139868 183139882 1.06e-05 0.191 CCAGCCACAGTCCCC
M2310_1.02 RUNX2 chr1 - 12454945 12454959 1.08e-05 0.191 TAAACCACAGAGTAC
M2310_1.02 RUNX2 chr5 - 124729693 124729707 1.09e-05 0.191 GTAACCACAGATCAC
M2310_1.02 RUNX2 chr12 - 107380494 107380508 1.1e-05 0.191 CAGACCACACAGAAA
M2310_1.02 RUNX2 chr18 - 59485012 59485026 1.11e-05 0.191 AAAACCACACAGCAG
M2310_1.02 RUNX2 chr6 - 109112854 109112868 1.18e-05 0.196 CAGACCACAGTGCAA
M2310_1.02 RUNX2 chr5 + 160008912 160008926 1.24e-05 0.201 AACACCACAGGGACA
M2310_1.02 RUNX2 chr1 + 8626556 8626570 1.39e-05 0.207 ccaaccacaaacatt
M2310_1.02 RUNX2 chr13 - 45178966 45178980 1.39e-05 0.207 GAAACCACAAAGGAC
M2310_1.02 RUNX2 chr2 + 189659891 189659905 1.4e-05 0.207 aaaaccacaaaaatt
M2310_1.02 RUNX2 chr4 + 82515822 82515836 1.46e-05 0.207 CAAACCAAAAAACCA
M2310_1.02 RUNX2 chr2 - 209473979 209473993 1.48e-05 0.207 GAAACCACACAGAAA
M2310_1.02 RUNX2 chr14 + 68140453 68140467 1.52e-05 0.207 ACAACCACAGCTACA
M2310_1.02 RUNX2 chr19 + 28164619 28164633 1.57e-05 0.207 AAAGCCACAGACAAT
M2310_1.02 RUNX2 chr6 + 63527898 63527912 1.58e-05 0.207 CTGACCACAAGCCTA
M2310_1.02 RUNX2 chr1 + 8626594 8626608 1.62e-05 0.207 ctgaccacagacatg
M2310_1.02 RUNX2 chr1 + 53808192 53808206 1.7e-05 0.207 TAAACCACAGATTCA
M2310_1.02 RUNX2 chr14 + 52352024 52352038 1.8e-05 0.207 CAACCCACAGAGTAC
M2310_1.02 RUNX2 chr6 + 43322179 43322193 1.85e-05 0.207 aaaaccacaacactt
M2310_1.02 RUNX2 chr5 - 125323844 125323858 1.88e-05 0.207 AAAACCACATCTCCA
M2310_1.02 RUNX2 chr3 - 30655727 30655741 1.89e-05 0.207 CAACCCACAGGTACC
M2310_1.02 RUNX2 chr7 + 69630521 69630535 1.95e-05 0.207 CAAACCACCAAACAC
M2310_1.02 RUNX2 chr3 + 124429100 124429114 1.95e-05 0.207 CCAGCCACAGTCCAC
M2310_1.02 RUNX2 chr12 - 98636275 98636289 1.96e-05 0.207 CAAGCCACATCCCAA
M2310_1.02 RUNX2 chr6 + 136410465 136410479 1.96e-05 0.207 GTGACCACAGACAGC
M2310_1.02 RUNX2 chr4 + 31090034 31090048 1.97e-05 0.207 CAAACCACAAGTCAT
M2310_1.02 RUNX2 chr2 - 209474197 209474211 2.03e-05 0.208 TAAACCACAAATCAG
M2310_1.02 RUNX2 chr6 + 29516275 29516289 2.21e-05 0.208 aaaaccacagtgaga
M2310_1.02 RUNX2 chr6 - 167829778 167829792 2.24e-05 0.208 GAAACCACAAAATTA
M2310_1.02 RUNX2 chr6 + 169396162 169396176 2.31e-05 0.208 AAAGCCACAGGGAAC
M2310_1.02 RUNX2 chr13 - 45178936 45178950 2.32e-05 0.208 CAACCCACATGCACC
M2310_1.02 RUNX2 chr13 + 78618713 78618727 2.32e-05 0.208 AAAACCACAGGTATA
M2310_1.02 RUNX2 chr12 - 122518169 122518183 2.34e-05 0.208 GAGACCACAGACATG
M2310_1.02 RUNX2 chr4 - 169622424 169622438 2.35e-05 0.208 CCCACCACAGAGATC
M2310_1.02 RUNX2 chr14 + 29736773 29736787 2.4e-05 0.208 TTGACCACAGAGCAC
M2310_1.02 RUNX2 chr5 - 176466290 176466304 2.5e-05 0.208 CCGACCACACAGACA
M2310_1.02 RUNX2 chr15 - 74546258 74546272 2.52e-05 0.208 CCAACCACACAGCAG
M2310_1.02 RUNX2 chr20 - 53609894 53609908 2.57e-05 0.208 ACAACCACAAAGTAA
M2310_1.02 RUNX2 chr5 + 123157924 123157938 2.63e-05 0.208 CCAACCACAATACTA
M2310_1.02 RUNX2 chr1 + 64506382 64506396 2.65e-05 0.208 acaaccacactCAAC
M2310_1.02 RUNX2 chr3 - 72899596 72899610 2.66e-05 0.208 CAAACCACAGGCTTT
M2310_1.02 RUNX2 chr10 - 12448887 12448901 2.67e-05 0.208 AAAACCACCAAAACC
M2310_1.02 RUNX2 chr1 - 44947489 44947503 2.74e-05 0.208 ACAGCCACACACACA
M2310_1.02 RUNX2 chr12 + 122517773 122517787 2.76e-05 0.208 CAACCCACAGAATTC
M2310_1.02 RUNX2 chr5 - 64949505 64949519 2.8e-05 0.208 AAAGCCACACACAGA
M2310_1.02 RUNX2 chr12 + 4320906 4320920 2.81e-05 0.208 ACAACCACAAATCAG
M2310_1.02 RUNX2 chr19 - 39996571 39996585 2.85e-05 0.208 AAAACCACAGTAAAT
M2310_1.02 RUNX2 chr15 + 55343222 55343236 2.88e-05 0.208 GTAACCACATACAAA
M2310_1.02 RUNX2 chr1 + 224412009 224412023 2.91e-05 0.208 caaaCCAAAACCAAA
M2310_1.02 RUNX2 chr17 - 43670214 43670228 2.94e-05 0.208 CACACCACATAAATC
M2310_1.02 RUNX2 chr4 + 82515852 82515866 2.94e-05 0.208 CTGACCACAAGCTAA
M2310_1.02 RUNX2 chr17 - 51650485 51650499 2.98e-05 0.208 CTCACCACAACACAG
M2310_1.02 RUNX2 chr9 - 128558538 128558552 2.98e-05 0.208 AAAACCACAACAGAG
M2310_1.02 RUNX2 chr15 - 98609811 98609825 3.09e-05 0.211 CAGCCCACATACCAC
M2310_1.02 RUNX2 chr10 - 12448878 12448892 3.11e-05 0.211 AAAACCACGGAGCCC
M2310_1.02 RUNX2 chr12 + 85834604 85834618 3.15e-05 0.211 aaaacctcaaacaaa
M2310_1.02 RUNX2 chr1 + 8626537 8626551 3.16e-05 0.211 taaaccacaaatgac
M2310_1.02 RUNX2 chr10 + 3468991 3469005 3.21e-05 0.211 AAACCCACAAAGCAG
M2310_1.02 RUNX2 chr2 - 172095673 172095687 3.25e-05 0.212 CAGCCCACACCACCC
M2310_1.02 RUNX2 chr3 + 159634625 159634639 3.33e-05 0.212 TAGACCACAAAAGCA
M2310_1.02 RUNX2 chr17 + 44901745 44901759 3.4e-05 0.212 ttAACCACACATACC
M2310_1.02 RUNX2 chr8 + 27939985 27939999 3.43e-05 0.212 CTGGCCACAGTCCCA
M2310_1.02 RUNX2 chr12 + 57112132 57112146 3.46e-05 0.212 CTGACCACAAGACTa
M2310_1.02 RUNX2 chr13 - 30848424 30848438 3.48e-05 0.212 AGGACCACAGAACCC
M2310_1.02 RUNX2 chr6 + 107666493 107666507 3.48e-05 0.212 CAAACCAGAAACAAA
M2310_1.02 RUNX2 chr1 + 165284578 165284592 3.53e-05 0.212 ACAACCACAGTCTAA
M2310_1.02 RUNX2 chr10 + 77305775 77305789 3.61e-05 0.212 GACACCACAGCCCTG
M2310_1.02 RUNX2 chr1 + 101288687 101288701 3.65e-05 0.212 CATGCCACAAAACAC
M2310_1.02 RUNX2 chr1 - 215582127 215582141 3.7e-05 0.212 CATACCACATACAAA
M2310_1.02 RUNX2 chr3 + 169526688 169526702 3.72e-05 0.212 GAAGCCACAAATCAA
M2310_1.02 RUNX2 chr15 + 71747738 71747752 3.74e-05 0.212 caaaccaaacaaacc
M2310_1.02 RUNX2 chr5 - 37738241 37738255 3.79e-05 0.212 AAAACCTCAAAGCCA
M2310_1.02 RUNX2 chr9 + 125752148 125752162 3.87e-05 0.212 GCCACCACAAACCCT
M2310_1.02 RUNX2 chr4 - 169622304 169622318 3.87e-05 0.212 AAACCCACAACATCA
M2310_1.02 RUNX2 chr3 - 58471538 58471552 3.88e-05 0.212 GACACCACAGCCTTC
M2310_1.02 RUNX2 chr9 - 135330313 135330327 3.98e-05 0.212 ATGACCACAGCCTTC
M2310_1.02 RUNX2 chr12 - 57111967 57111981 4.01e-05 0.212 CCCACCACAGTCTCA
M2310_1.02 RUNX2 chr19 + 34218473 34218487 4.19e-05 0.212 CAAACCTCAGCAAAC
M2310_1.02 RUNX2 chr20 - 57323308 57323322 4.21e-05 0.212 CAGACTACAGACCCA
M2310_1.02 RUNX2 chr3 + 17730463 17730477 4.24e-05 0.212 caggccacaggaaaa
M2310_1.02 RUNX2 chr9 + 85743340 85743354 4.27e-05 0.212 ATGACCACAACACAG
M2310_1.02 RUNX2 chr14 - 29736592 29736606 4.29e-05 0.212 ACGACCACAAAGCCT
M2310_1.02 RUNX2 chr14 + 36835532 36835546 4.29e-05 0.212 ATGGCCACAAAGCCA
M2310_1.02 RUNX2 chr15 - 88918972 88918986 4.31e-05 0.212 CTAACCACAGTCAGT
M2310_1.02 RUNX2 chr1 - 8374258 8374272 4.36e-05 0.212 AAAGCCACAAGACCT
M2310_1.02 RUNX2 chr17 + 29744911 29744925 4.38e-05 0.212 CAAACCATAAAGCCA
M2310_1.02 RUNX2 chr17 - 68381312 68381326 4.42e-05 0.212 TTAGCCACAGCAACC
M2310_1.02 RUNX2 chr9 + 18976905 18976919 4.44e-05 0.212 GACCCCACAAAACCA
M2310_1.02 RUNX2 chr3 + 30655462 30655476 4.48e-05 0.212 CTAACCACATCCCTG
M2310_1.02 RUNX2 chr12 + 122517762 122517776 4.48e-05 0.212 GATACCACACACAAC
M2310_1.02 RUNX2 chr1 + 228903379 228903393 4.48e-05 0.212 GCAGCCACAAAGCCA
M2310_1.02 RUNX2 chr13 - 43054724 43054738 4.5e-05 0.212 AATACCACAGAAATA
M2310_1.02 RUNX2 chr7 - 17600135 17600149 4.6e-05 0.212 GAAACCACACCTAAA
M2310_1.02 RUNX2 chr5 + 124729889 124729903 4.6e-05 0.212 TAAACCACATCTACC
M2310_1.02 RUNX2 chr6 + 15735909 15735923 4.63e-05 0.212 taaaccacactgaca
M2310_1.02 RUNX2 chr9 + 85743345 85743359 4.63e-05 0.212 CACAACACAGACCCA
M2310_1.02 RUNX2 chr17 + 20936871 20936885 4.91e-05 0.221 AAAAGCACAGAAACC
M2310_1.02 RUNX2 chr6 + 46325701 46325715 4.91e-05 0.221 ATCACCACAAAGACT
M2310_1.02 RUNX2 chr11 - 116853727 116853741 5e-05 0.222 AAAACCACATCCTCT
M2310_1.02 RUNX2 chr14 + 99571493 99571507 5.03e-05 0.222 CAGACCAAAGGCCCA
M2310_1.02 RUNX2 chr1 + 109214898 109214912 5.18e-05 0.226 AAAACCATAGAACCA
M2310_1.02 RUNX2 chr16 + 50331832 50331846 5.2e-05 0.226 aaagccacatacata
M2310_1.02 RUNX2 chr6 + 79601172 79601186 5.23e-05 0.226 TAGACCACAGACGGA
M2310_1.02 RUNX2 chr12 - 806619 806633 5.29e-05 0.226 AAAGCCACAACTACG
M2310_1.02 RUNX2 chr17 + 8173211 8173225 5.31e-05 0.226 CAAACGACAAAAAAC
M2310_1.02 RUNX2 chr18 + 44790133 44790147 5.36e-05 0.226 ATAGCCACATGCCCC
M2310_1.02 RUNX2 chr21 - 36210498 36210512 5.55e-05 0.231 ATCACCACACCCAGC
M2310_1.02 RUNX2 chr10 - 8272042 8272056 5.57e-05 0.231 CCAACCACATTAACA
M2310_1.02 RUNX2 chr17 - 2484398 2484412 5.66e-05 0.231 TTAACCACAGACTAT
M2310_1.02 RUNX2 chr8 + 18844544 18844558 5.66e-05 0.231 CAAACCACATTAAGA
M2310_1.02 RUNX2 chr4 - 10619407 10619421 5.68e-05 0.231 CAAAACACAGTCCCA
M2310_1.02 RUNX2 chr7 + 116218361 116218375 5.71e-05 0.231 CTAGCCACAATGAAC
M2310_1.02 RUNX2 chr17 + 44007163 44007177 5.81e-05 0.232 AAAATCACAGACAAA
M2310_1.02 RUNX2 chr1 + 229221490 229221504 5.81e-05 0.232 CACCCCACACTCACC
M2310_1.02 RUNX2 chr1 - 243927242 243927256 5.85e-05 0.232 AAAGCCACAGCTCGA
M2310_1.02 RUNX2 chr3 - 16476823 16476837 5.96e-05 0.232 ATAACCACATGCCAG
M2310_1.02 RUNX2 chr1 - 165284375 165284389 5.99e-05 0.232 CTAACCTCAAACACG
M2310_1.02 RUNX2 chr19 - 16608370 16608384 6.07e-05 0.232 ATAACCTCAGAAACC
M2310_1.02 RUNX2 chr5 + 69517990 69518004 6.07e-05 0.232 AAAACAACAAACCCG
M2310_1.02 RUNX2 chr11 + 48104190 48104204 6.09e-05 0.232 CACCCCACAGTGCCA
M2310_1.02 RUNX2 chr1 + 44267458 44267472 6.12e-05 0.232 TAAAACACAAACACC
M2310_1.02 RUNX2 chr18 - 45051096 45051110 6.22e-05 0.235 CAAAACACAGACATA
M2310_1.02 RUNX2 chr5 - 67452147 67452161 6.3e-05 0.236 TTAACCACAACACAT
M2310_1.02 RUNX2 chr6 - 15735759 15735773 6.38e-05 0.238 CAAAGCACAGAGAAC
M2310_1.02 RUNX2 chr5 - 142223948 142223962 6.5e-05 0.24 CACACCACCACACCC
M2310_1.02 RUNX2 chr2 - 200787400 200787414 6.58e-05 0.24 CAGCCCACATAGACC
M2310_1.02 RUNX2 chr10 + 101816270 101816284 6.64e-05 0.24 aaaacaacaaaacac
M2310_1.02 RUNX2 chr14 - 99571730 99571744 6.72e-05 0.24 CAGGCCACAAATTAC
M2310_1.02 RUNX2 chr6 - 167829787 167829801 6.72e-05 0.24 CTAAACACAGAAACC
M2310_1.02 RUNX2 chr1 + 229221668 229221682 6.74e-05 0.24 AAAACCAGAAGCCCA
M2310_1.02 RUNX2 chr15 + 40904202 40904216 6.77e-05 0.24 CTCCCCACAGAATCC
M2310_1.02 RUNX2 chr17 - 51650984 51650998 6.83e-05 0.24 GTGACCACAGGGAAC
M2310_1.02 RUNX2 chr4 + 139555294 139555308 6.83e-05 0.24 TCACCCACAGCCAAC
M2310_1.02 RUNX2 chr17 + 61150457 61150471 6.92e-05 0.241 ATAACCACCACCCAC
M2310_1.02 RUNX2 chr1 + 8629553 8629567 6.97e-05 0.241 AAAAGCACAGTCCCC
M2310_1.02 RUNX2 chr16 + 25127013 25127027 7e-05 0.241 CCAACCACACAGAGG
M2310_1.02 RUNX2 chr8 + 29126642 29126656 7.06e-05 0.241 CTACCCACACCCTCA
M2310_1.02 RUNX2 chr10 + 75379480 75379494 7.06e-05 0.241 ATTACCACAATCACA
M2310_1.02 RUNX2 chr12 - 24378863 24378877 7.17e-05 0.242 TTACCCACAGCCAAA
M2310_1.02 RUNX2 chr1 - 26698186 26698200 7.26e-05 0.242 CAAACCAAAGCAATC
M2310_1.02 RUNX2 chr7 + 140396510 140396524 7.41e-05 0.242 AAAACCACATTCTTC
M2310_1.02 RUNX2 chr3 + 30655563 30655577 7.44e-05 0.242 CAACCCACAAGTGCC
M2310_1.02 RUNX2 chr19 + 40567119 40567133 7.44e-05 0.242 aaaaccaaaagcaaa
M2310_1.02 RUNX2 chr2 - 202831785 202831799 7.44e-05 0.242 AAAACCACAAATGTG
M2310_1.02 RUNX2 chr8 - 28445387 28445401 7.5e-05 0.242 GAAAACACAAAACCC
M2310_1.02 RUNX2 chr5 - 142223945 142223959 7.5e-05 0.242 ACCACCACACCCAGC
M2310_1.02 RUNX2 chr6 + 151068129 151068143 7.54e-05 0.242 CAAACCAAAGTAACA
M2310_1.02 RUNX2 chr6 + 1679843 1679857 7.57e-05 0.242 CAGACCACAAAGGGG
M2310_1.02 RUNX2 chr13 - 42072210 42072224 7.57e-05 0.242 TTAACCACAACACTG
M2310_1.02 RUNX2 chr19 + 16608497 16608511 7.69e-05 0.244 tccaccacagaaatc
M2310_1.02 RUNX2 chr3 - 16534457 16534471 7.73e-05 0.244 AACACCACAATGAGA
M2310_1.02 RUNX2 chr1 + 8472974 8472988 7.76e-05 0.244 TAAACCACAGGTTAA
M2310_1.02 RUNX2 chr3 - 140953371 140953385 7.83e-05 0.244 GAAACCACAATTATA
M2310_1.02 RUNX2 chr8 - 60620179 60620193 7.89e-05 0.244 GAACCCACACACAGA
M2310_1.02 RUNX2 chr1 - 243927229 243927243 7.89e-05 0.244 GAAACCTCAGGCCAC
M2310_1.02 RUNX2 chr10 + 71836150 71836164 7.96e-05 0.245 AAAATCACAAACACG
M2310_1.02 RUNX2 chr19 + 43572269 43572283 8.08e-05 0.247 aaaaacacaaatccc
M2310_1.02 RUNX2 chr3 + 61805623 61805637 8.19e-05 0.249 ATTACCACAACCCAG
M2310_1.02 RUNX2 chr20 - 53899878 53899892 8.26e-05 0.249 ACGCCCACAGGCCAC
M2310_1.02 RUNX2 chr16 - 22728607 22728621 8.32e-05 0.249 CAAGCCACATGCACT
M2310_1.02 RUNX2 chr7 - 133492281 133492295 8.32e-05 0.249 AACACCACACAGAAT
M2310_1.02 RUNX2 chr1 - 92797418 92797432 8.66e-05 0.252 TAAAACACAAACACA
M2310_1.02 RUNX2 chr18 - 75213997 75214011 8.69e-05 0.252 CAAAACACAGGACAC
M2310_1.02 RUNX2 chr12 - 3652120 3652134 8.77e-05 0.252 CAAGCCAGAGACACA
M2310_1.02 RUNX2 chr1 + 8701404 8701418 8.77e-05 0.252 AAAAACACACACACA
M2310_1.02 RUNX2 chr20 + 53611578 53611592 8.77e-05 0.252 AAAAacacacacaca
M2310_1.02 RUNX2 chr1 + 232682517 232682531 8.77e-05 0.252 AAAAACACACACACA
M2310_1.02 RUNX2 chr4 + 173074792 173074806 8.81e-05 0.252 ACAACCACCAAGCCC
M2310_1.02 RUNX2 chr8 - 17540243 17540257 8.84e-05 0.252 AAAGCCACAATGCAG
M2310_1.02 RUNX2 chr10 - 94089251 94089265 8.96e-05 0.252 AAAGCCACAGCTGAC
M2310_1.02 RUNX2 chr6 + 169396156 169396170 8.96e-05 0.252 ACAACCAAAGCCACA
M2310_1.02 RUNX2 chr6 + 169396282 169396296 8.96e-05 0.252 ACAACCAAAGCCACA
M2310_1.02 RUNX2 chr5 + 17306369 17306383 8.99e-05 0.252 CCACCCACAGGCCAT
M2310_1.02 RUNX2 chr2 - 8681489 8681503 9.03e-05 0.252 GAAGCCACAGTTCAC
M2310_1.02 RUNX2 chr17 + 4362523 4362537 9.06e-05 0.252 cactcCACAACCCAA
M2310_1.02 RUNX2 chr6 + 138593592 138593606 9.18e-05 0.252 AAAACAACAAACTCA
M2310_1.02 RUNX2 chr18 - 22032828 22032842 9.21e-05 0.252 CAAATCACAGCCCAG
M2310_1.02 RUNX2 chr19 + 39996553 39996567 9.21e-05 0.252 AAAATCACAGCCCCG
M2310_1.02 RUNX2 chr2 - 147845018 147845032 9.25e-05 0.252 CAGACCAAAAAAAAA
M2310_1.02 RUNX2 chr2 + 202822591 202822605 9.25e-05 0.252 GTAACCACAATAAGA
M2310_1.02 RUNX2 chr17 - 29744958 29744972 9.37e-05 0.253 ATCCCCACAGGCAAC
M2310_1.02 RUNX2 chr13 - 42072231 42072245 9.45e-05 0.253 CAAAACACAAAGTCC
M2310_1.02 RUNX2 chr3 - 61805930 61805944 9.45e-05 0.253 GAAAACACAGCCCAC
M2310_1.02 RUNX2 chr1 + 66542733 66542747 9.49e-05 0.253 gaacccacagaaaat
M2310_1.02 RUNX2 chr8 + 124077652 124077666 9.52e-05 0.253 TTCACCACAGTGCCA
M2310_1.02 RUNX2 chr1 - 59215032 59215046 9.64e-05 0.255 GTAACCACATCTCCA
M2310_1.02 RUNX2 chr2 - 234363309 234363323 9.76e-05 0.256 AAAACCTCAGCAAAA
M2310_1.02 RUNX2 chr4 + 111883575 111883589 9.8e-05 0.256 CAGACCACAAGATTG
M2310_1.02 RUNX2 chr9 + 18977084 18977098 9.85e-05 0.256 ATAACCACTGAAACA
M2310_1.02 RUNX2 chr6 + 27602515 27602529 9.85e-05 0.256 taaaccacggcaccc
M2310_1.02 RUNX2 chr2 - 8681331 8681345 9.96e-05 0.256 CAAACCACCCACGCA
M2310_1.02 RUNX2 chr9 + 127388505 127388519 9.96e-05 0.256 CAAACCCCAGAGGCC
M2310_1.02 RUNX2 chr3 - 61805923 61805937 0.0001 0.256 CAGCCCACAACATAA

DEBUGGING INFORMATION

Command line:

/software/meme/4.12.0/bin/fimo --parse-genomic-coord --verbosity 1 --oc /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/GFI1B.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/fimo_out_14 --bgfile /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/GFI1B.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/background --motif M2310_1.02 /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/MotifData/motif_databases/CIS-BP/Homo_sapiens.meme /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/GFI1B.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/GFI1B.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa

Settings:

output_directory = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/GFI1B.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/fimo_out_14 MEME file name = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/MotifData/motif_databases/CIS-BP/Homo_sapiens.meme sequence file name = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/GFI1B.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/GFI1B.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa
background file name = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/GFI1B.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/background alphabet = DNA max stored scores = 100000
allow clobber = true compute q-values = true parse genomic coord. = true
text only = false scan both strands = true max strand = false
threshold type = p-value output theshold = 0.0001 pseudocount = 0.1
alpha = 1 verbosity = 1

This information can be useful in the event you wish to report a problem with the FIMO software.


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