# WARNING: this file is not sorted! # db id alt consensus E-value adj_p-value log_adj_p-value bin_location bin_width total_width sites_in_bin total_sites p_success p-value mult_tests 1 DGCWSWGATTT MEME-1 DGCWSWGATTT 5.8e-075 7.8e-078 -177.54 0.0 100 490 328 582 0.20408 3.2e-080 244 1 MAHAMAMAAAHAAAHAMAHAMAHAMAHAMAW MEME-2 MAHAMAMAAAHAAAHAMAHAMAHAMAHAMAW 3.8e-004 5.1e-007 -14.49 0.0 70 470 55 163 0.14894 2.2e-009 234 1 RTGACTCAY MEME-3 RTGACTCAY 1.3e-016 1.8e-019 -43.19 0.0 152 492 134 214 0.30894 7.2e-022 245 1 VNAAARWAAACA MEME-6 VNAAARWAAACA 2.4e-009 3.2e-012 -26.46 0.0 131 489 210 489 0.26789 1.3e-014 244 1 AATCCCAGCAC MEME-7 AATCCCAGCAC 5.8e0000 7.7e-003 -4.87 0.0 34 490 24 139 0.06939 3.2e-005 244 1 CCTGCTGTG MEME-9 CCTGCTGTG 8.9e0000 1.2e-002 -4.43 0.0 44 492 48 293 0.08943 4.9e-005 245 2 SWGATTW DREME-1 SWGATTT 4.6e-047 6.1e-050 -113.32 0.0 100 494 247 479 0.20243 2.5e-052 246 2 RTAAAY DREME-2 RTAAAY 4.9e-013 6.5e-016 -34.96 0.0 145 495 238 499 0.29293 2.6e-018 247 2 TGACTCAB DREME-3 TGACTCAY 4.9e-013 6.5e-016 -34.96 0.0 153 493 101 155 0.31034 2.7e-018 246 2 AAAACMA DREME-4 AAAACMA 1.4e-005 1.8e-008 -17.82 0.0 96 494 92 248 0.19433 7.4e-011 246 3 M0105_1.02 (ARID3C)_(Mus_musculus)_(DBD_0.87) NTTTDATHN 8.4e-003 1.1e-005 -11.40 0.0 100 492 172 579 0.20325 4.6e-008 245 3 M0300_1.02 (ATF2)_(Mus_musculus)_(DBD_1.00) NRTKACGTMA 1.9e-001 2.5e-004 -8.28 0.0 169 491 247 559 0.34420 1.0e-006 245 3 M0718_1.02 FOXK1 DNRTMAACAH 8.1e-015 1.1e-017 -39.06 0.0 151 491 289 592 0.30754 4.4e-020 245 3 M0719_1.02 FOXG1 RTAAACAW 8.9e-013 1.2e-015 -34.37 0.0 163 493 285 563 0.33063 4.8e-018 246 3 M0728_1.02 (FOXJ1)_(Mus_musculus)_(DBD_1.00) NRTAAACAAANN 2.0e-010 2.7e-013 -28.93 0.0 111 489 221 593 0.22699 1.1e-015 244 3 M0736_1.02 (FOXK2)_(Mus_musculus)_(DBD_0.90) RTAAACAA 2.8e-009 3.7e-012 -26.31 0.0 165 493 288 592 0.33469 1.5e-014 246 3 M0737_1.02 (FOXB2)_(Mus_musculus)_(DBD_0.94) WRWGTAAAYA 7.3e-012 9.8e-015 -32.25 0.0 161 491 291 588 0.32790 4.0e-017 245 3 M0747_1.02 (FOXL2)_(Mus_musculus)_(DBD_0.70) WNNRTAAAYA 4.9e-015 6.6e-018 -39.56 0.0 167 491 310 590 0.34012 2.7e-020 245 3 M0756_1.02 (FOXN3)_(Strongylocentrotus_purpuratus)_(DBD_0.44) NNHMACANN 2.8e-007 3.7e-010 -21.70 0.0 138 492 224 529 0.28049 1.5e-012 245 3 M0890_1.02 LHX6 NYAATCAN 1.0e-018 1.4e-021 -48.01 0.0 113 493 247 595 0.22921 5.7e-024 246 3 M0892_1.02 EMX1 NYTAATKAVN 7.6e-002 1.0e-004 -9.20 0.0 201 491 290 565 0.40937 4.1e-007 245 3 M0894_1.02 LBX1 TTAATTAG 4.6e0000 6.1e-003 -5.10 0.0 201 493 271 547 0.40771 2.5e-005 246 3 M0896_1.02 VENTX TTAATTAG 5.4e-003 7.2e-006 -11.84 0.0 201 493 288 550 0.40771 2.9e-008 246 3 M0897_1.02 HOXB13 DTTWAYDRBN 9.5e-014 1.3e-016 -36.60 0.0 189 491 330 581 0.38493 5.2e-019 245 3 M0900_1.02 SHOX HTAATTRV 2.8e0000 3.8e-003 -5.58 0.0 189 493 271 577 0.38337 1.5e-005 246 3 M0905_1.02 (HOXA4)_(Mus_musculus)_(DBD_1.00) NTAATKRNN 7.0e-004 9.3e-007 -13.89 0.0 226 492 300 511 0.45935 3.8e-009 245 3 M0906_1.02 (VTN)_(Mus_musculus)_(DBD_0.79) NMTTAATTAR 4.3e0000 5.8e-003 -5.16 0.0 215 491 258 487 0.43788 2.4e-005 245 3 M0931_1.02 (LHX1)_(Mus_musculus)_(DBD_1.00) TAATTRNNN 9.1e0000 1.2e-002 -4.41 0.0 142 492 205 560 0.28862 5.0e-005 245 3 M0949_1.02 (AC012531.1)_(Mus_musculus)_(DBD_1.00) NTAATDR 1.1e-002 1.4e-005 -11.17 0.0 196 494 223 425 0.39676 5.8e-008 246 3 M0958_1.02 (LHX4)_(Mus_musculus)_(DBD_1.00) BYAATYW 8.8e-002 1.2e-004 -9.05 0.0 214 494 312 583 0.43320 4.8e-007 246 3 M0961_1.02 (BARHL1)_(Mus_musculus)_(DBD_1.00) NTAAWYGNN 6.5e-001 8.7e-004 -7.05 0.0 88 492 148 582 0.17886 3.6e-006 245 3 M0969_1.02 (LHX8)_(Mus_musculus)_(DBD_1.00) NYAATYANN 3.3e-012 4.4e-015 -33.07 0.0 202 492 346 593 0.41057 1.8e-017 245 3 M0996_1.02 (HDX)_(Mus_musculus)_(DBD_0.99) RNDATCA 4.7e-001 6.3e-004 -7.37 0.0 152 494 123 281 0.30769 2.6e-006 246 3 M0999_1.02 (NKX6-1)_(Mus_musculus)_(DBD_1.00) NWTAATKRN 6.2e-002 8.3e-005 -9.39 0.0 108 492 177 570 0.21951 3.4e-007 245 3 M1007_1.02 (HOXA11)_(Mus_musculus)_(DBD_1.00) TTWAYDDNN 1.3e-005 1.7e-008 -17.88 0.0 192 492 121 194 0.39024 7.0e-011 245 3 M1012_1.02 (HOXB4)_(Mus_musculus)_(DBD_1.00) NTAATKRNN 7.4e-004 1.0e-006 -13.82 0.0 226 492 316 541 0.45935 4.1e-009 245 3 M1025_1.02 (HOXD1)_(Mus_musculus)_(DBD_0.98) NNYVATYA 1.3e-001 1.7e-004 -8.67 0.0 227 493 250 433 0.46045 7.0e-007 246 3 M1027_1.02 (HOXA6)_(Mus_musculus)_(DBD_1.00) WTAATKRBN 1.3e-003 1.7e-006 -13.26 0.0 204 492 297 555 0.41463 7.1e-009 245 3 M1039_1.02 (ENSG00000229544)_(Mus_musculus)_(DBD_1.00) NNTAATDRN 2.9e-001 3.9e-004 -7.86 0.0 200 492 271 535 0.40650 1.6e-006 245 3 M1070_1.02 (HOXC5)_(Mus_musculus)_(DBD_1.00) NTAATKRNN 1.5e-003 2.1e-006 -13.09 0.0 226 492 300 514 0.45935 8.4e-009 245 3 M1071_1.02 (HOXD3)_(Mus_musculus)_(DBD_1.00) NTAATKRN 7.4e-004 1.0e-006 -13.82 0.0 201 493 294 554 0.40771 4.0e-009 246 3 M1073_1.02 (HOXA3)_(Mus_musculus)_(DBD_1.00) HTAATKRNN 2.8e-003 3.8e-006 -12.48 0.0 226 492 332 578 0.45935 1.5e-008 245 3 M1125_1.02 (NKX1-1)_(Mus_musculus)_(DBD_1.00) NNTAATKRNN 2.8e-002 3.8e-005 -10.19 0.0 201 491 295 572 0.40937 1.5e-007 245 3 M1157_1.02 (HOXB9)_(PBM_CONSTRUCTS)_(DBD_1.00) WTTWATKRBN 1.2e-009 1.6e-012 -27.17 0.0 189 491 310 567 0.38493 6.5e-015 245 3 M1163_1.02 (NKX6-3)_(PBM_CONSTRUCTS)_(DBD_1.00) NWTAATKRN 7.3e-002 9.8e-005 -9.23 0.0 202 492 281 543 0.41057 4.0e-007 245 3 M1601_1.02 (SOX11)_(Mus_musculus)_(DBD_1.00) WTTGTBNNN 1.8e-002 2.5e-005 -10.61 0.0 112 492 191 596 0.22764 1.0e-007 245 3 M1863_1.02 FOXD1 GTAAACAW 5.0e-006 6.8e-009 -18.81 0.0 173 493 271 556 0.35091 2.7e-011 246 3 M1868_1.02 GATA2 DSAGATAAGAAHYH 8.6e-004 1.1e-006 -13.68 0.0 185 487 281 562 0.37988 4.7e-009 243 3 M2267_1.02 CDX2 TTTTATKRCHB 2.2e-005 3.0e-008 -17.33 0.0 140 490 234 570 0.28571 1.2e-010 244 3 M2270_1.02 DUX4 TAAYYYAATCA 1.6e-007 2.1e-010 -22.28 0.0 134 490 219 523 0.27347 8.6e-013 244 3 M2278_1.02 FOS DVTGASTCATB 1.2e-011 1.5e-014 -31.80 0.0 152 490 250 514 0.31020 6.3e-017 244 3 M2283_1.02 FOXP1 HWWADGTAAACAAAR 1.1e-003 1.5e-006 -13.39 0.0 146 486 240 583 0.30041 6.3e-009 242 3 M2287_1.02 (HOXC9)_(Mus_musculus)_(DBD_0.98) RGCMATAAATCAB 3.7e-030 4.9e-033 -74.40 0.0 142 488 306 566 0.29098 2.0e-035 243 3 M2289_1.02 JUN DDRATGATGTMAT 3.4e0000 4.5e-003 -5.40 0.0 264 488 313 493 0.54098 1.9e-005 243 3 M2292_1.02 JUND DRTGASTCATS 5.5e-010 7.4e-013 -27.94 0.0 152 490 237 493 0.31020 3.0e-015 244 3 M2296_1.02 MAFK MWDASTCAGCAWWWW 3.1e0000 4.2e-003 -5.48 0.0 80 486 131 559 0.16461 1.7e-005 242 3 M2310_1.02 RUNX2 MAAACCACARAMMMM 1.1e-003 1.5e-006 -13.43 0.0 78 486 148 584 0.16049 6.0e-009 242 3 M2385_1.02 FOXP2 RWGTAAACAVR 1.4e-007 1.8e-010 -22.42 0.0 140 490 243 571 0.28571 7.5e-013 244 3 M4452_1.02 BATF TYYYRWWATGASTCA 5.2e-011 7.0e-014 -30.29 0.0 182 486 305 560 0.37449 2.9e-016 242 3 M4526_1.02 SMARCC1 DSRVDGTGASTCAKV 8.4e-007 1.1e-009 -20.61 0.0 156 486 248 535 0.32099 4.6e-012 242 3 M4565_1.02 FOSL2 VDGGATGASTCAYH 2.5e-007 3.3e-010 -21.83 0.0 169 487 246 489 0.34702 1.4e-012 243 3 M4567_1.02 FOXA2 NMWRWGTAAACANNN 9.6e-007 1.3e-009 -20.48 0.0 162 486 277 590 0.33333 5.3e-012 242 3 M4572_1.02 MAFF TGCTGACTCAGCAWW 1.8e0000 2.4e-003 -6.02 0.0 390 486 392 445 0.80247 1.0e-005 242 3 M4600_1.02 GATA1 NSAGATAAGVV 4.0e-005 5.3e-008 -16.75 0.0 186 490 290 569 0.37959 2.2e-010 244 3 M4619_1.02 FOSL1 BGGTGASTCAT 2.1e-011 2.7e-014 -31.23 0.0 164 490 246 474 0.33469 1.1e-016 244 3 M4623_1.02 JUNB NDRTGASTCATNYHY 5.4e-008 7.2e-011 -23.36 0.0 168 486 251 497 0.34568 3.0e-013 242 3 M4629_1.02 NFE2 VRTGACTCAGCANWWYB 1.1e-003 1.5e-006 -13.40 0.0 188 484 231 442 0.38843 6.3e-009 241 3 M4665_1.02 GATA3 VWGATARVMATCWSY 6.1e0000 8.1e-003 -4.81 0.0 88 486 124 487 0.18107 3.4e-005 242 3 M4681_1.02 BACH2 TGCTGAGTCA 4.4e-003 5.9e-006 -12.05 0.0 163 491 213 468 0.33198 2.4e-008 245 3 M4930_1.02 (NPAS4)_(Drosophila_melanogaster)_(DBD_0.61) RADTCGTGACT 8.1e0000 1.1e-002 -4.52 0.0 88 490 103 394 0.17959 4.5e-005 244 3 M5287_1.02 ALX4 HTAATYNAATTAN 2.6e-002 3.5e-005 -10.25 0.0 144 488 210 524 0.29508 1.5e-007 243 3 M5291_1.02 ARX YTAATTNRATTAN 5.9e-003 7.9e-006 -11.75 0.0 140 488 201 501 0.28689 3.2e-008 243 3 M5293_1.02 ATF7 NKATGACGTCATHN 3.7e-002 4.9e-005 -9.92 0.0 211 487 161 273 0.43326 2.0e-007 243 3 M5302_1.02 BATF3 TGATGACGTCATCA 3.9e-002 5.2e-005 -9.87 0.0 209 487 86 131 0.42916 2.1e-007 243 3 M5310_1.02 BSX NTAATBRS 1.7e-006 2.2e-009 -19.92 0.0 201 493 309 563 0.40771 9.1e-012 246 3 M5342_1.02 DLX4 NTAATTRN 2.8e-001 3.7e-004 -7.90 0.0 203 493 297 583 0.41176 1.5e-006 246 3 M5344_1.02 DLX6 NTAATTRB 7.6e-001 1.0e-003 -6.89 0.0 115 493 183 581 0.23327 4.1e-006 246 3 M5348_1.02 DRGX NTAATYHAATTAN 7.6e-003 1.0e-005 -11.49 0.0 214 488 280 502 0.43852 4.2e-008 243 3 M5349_1.02 DUXA NTRAYYTAATCAN 3.6e-012 4.8e-015 -32.96 0.0 144 488 254 542 0.29508 2.0e-017 243 3 M5388_1.02 EMX2 NYTAATTAVB 2.3e0000 3.1e-003 -5.78 0.0 249 491 317 528 0.50713 1.3e-005 245 3 M5390_1.02 EN1 VBTAATTRSB 3.8e-003 5.1e-006 -12.18 0.0 203 491 304 576 0.41344 2.1e-008 245 3 M5414_1.02 ESX1 DNTAATTRRN 8.5e-002 1.1e-004 -9.08 0.0 213 491 310 578 0.43381 4.7e-007 245 3 M5427_1.02 EVX1 SNTAATTABB 3.0e0000 4.1e-003 -5.50 0.0 131 491 198 571 0.26680 1.7e-005 245 3 M5428_1.02 EVX2 NNTAATKABB 7.4e-002 1.0e-004 -9.21 0.0 201 491 293 572 0.40937 4.1e-007 245 3 M5446_1.02 FOXD4L2 RTAAACA 1.3e-012 1.8e-015 -33.95 0.0 140 494 267 595 0.28340 7.3e-018 246 3 M5460_1.02 FOXL1 RTAAACA 3.9e-016 5.2e-019 -42.10 0.0 168 494 312 588 0.34008 2.1e-021 246 3 M5480_1.02 GBX1 RBTAATTRGB 7.5e0000 1.0e-002 -4.59 0.0 201 491 261 527 0.40937 4.1e-005 245 3 M5481_1.02 GBX2 NYTAATTRSB 1.6e-002 2.2e-005 -10.74 0.0 213 491 306 562 0.43381 8.8e-008 245 3 M5493_1.02 GMEB2 KTRCGTAA 3.9e0000 5.2e-003 -5.26 0.0 263 493 255 401 0.53347 2.1e-005 246 3 M5502_1.02 GSX1 NBTAATKRSN 1.3e-001 1.7e-004 -8.66 0.0 201 491 291 571 0.40937 7.1e-007 245 3 M5503_1.02 GSX2 DYTAATKRVN 3.9e-001 5.2e-004 -7.57 0.0 201 491 292 579 0.40937 2.1e-006 245 3 M5518_1.02 HMX1 NDTTAATTGNT 1.3e-002 1.7e-005 -10.99 0.0 172 490 263 572 0.35102 6.9e-008 244 3 M5519_1.02 HMX2 NDTTAAKTGBT 5.0e-002 6.7e-005 -9.61 0.0 112 490 187 583 0.22857 2.7e-007 244 3 M5520_1.02 HMX3 BNTTAAKTGNY 1.4e-003 1.9e-006 -13.19 0.0 112 490 195 588 0.22857 7.7e-009 244 3 M5541_1.02 HOXB2 NNTAATKANN 1.1e-001 1.5e-004 -8.80 0.0 227 491 324 574 0.46232 6.2e-007 245 3 M5542_1.02 HOXB3 NYTAATKRNN 5.1e-002 6.8e-005 -9.60 0.0 201 491 296 576 0.40937 2.8e-007 245 3 M5544_1.02 HOXC10 DTTTWATKDB 1.4e-007 1.9e-010 -22.36 0.0 191 491 314 588 0.38900 7.9e-013 245 3 M5547_1.02 HOXC11 DRTCRTWAAAH 7.9e-007 1.1e-009 -20.66 0.0 152 490 248 550 0.31020 4.4e-012 244 3 M5551_1.02 HOXC12 TTTTATTRC 4.9e-004 6.5e-007 -14.24 0.0 90 492 165 584 0.18293 2.7e-009 245 3 M5553_1.02 HOXC13 CYAATAAAAH 1.1e0000 1.4e-003 -6.55 0.0 157 491 237 581 0.31976 5.9e-006 245 3 M5555_1.02 HOXD11 RTCGTAAAAH 2.0e-005 2.6e-008 -17.45 0.0 153 491 237 533 0.31161 1.1e-010 245 3 M5557_1.02 HOXD12 GTAATAAAA 1.1e-001 1.4e-004 -8.86 0.0 90 492 155 582 0.18293 5.8e-007 245 3 M5583_1.02 ISL2 YTAAKTGC 8.1e-001 1.1e-003 -6.83 0.0 121 493 192 584 0.24544 4.4e-006 246 3 M5584_1.02 ISX YTAATCTAATTAR 1.0e0000 1.4e-003 -6.60 0.0 218 488 218 390 0.44672 5.6e-006 243 3 M5587_1.02 JDP2 ATGASTCAT 3.9e-011 5.3e-014 -30.58 0.0 152 492 233 478 0.30894 2.1e-016 245 3 M5594_1.02 LBX2 CTBRANSTRATTA 2.8e0000 3.7e-003 -5.59 0.0 304 488 405 573 0.62295 1.5e-005 243 3 M5602_1.02 LHX9 YTAATTRN 2.2e-001 2.9e-004 -8.14 0.0 201 493 290 572 0.40771 1.2e-006 246 3 M5623_1.02 MEOX1 VSTAATTAHC 2.3e0000 3.1e-003 -5.78 0.0 201 491 281 563 0.40937 1.3e-005 245 3 M5624_1.02 MEOX2 DSTAATTAWN 1.2e-002 1.6e-005 -11.04 0.0 201 491 301 580 0.40937 6.5e-008 245 3 M5631_1.02 MIXL1 NBTAATTRVN 9.5e-002 1.3e-004 -8.97 0.0 201 491 295 577 0.40937 5.2e-007 245 3 M5635_1.02 MNX1 TTTAATTRNH 8.4e-003 1.1e-005 -11.40 0.0 119 491 196 571 0.24236 4.6e-008 245 3 M5672_1.02 NOTO NBTAATTARN 2.3e-002 3.0e-005 -10.40 0.0 217 491 308 559 0.44196 1.2e-007 245 3 M5697_1.02 ONECUT3 DTTATYGATTTTTY 3.9e0000 5.2e-003 -5.26 0.0 97 487 126 449 0.19918 2.1e-005 243 3 M5714_1.02 PHOX2A TAATYYAATTA 9.9e-003 1.3e-005 -11.23 0.0 214 490 287 517 0.43673 5.4e-008 244 3 M5715_1.02 PHOX2B TAATYYAATTA 4.7e-003 6.3e-006 -11.98 0.0 214 490 292 525 0.43673 2.6e-008 244 3 M5771_1.02 RAX DYTAATTRRY 4.3e0000 5.8e-003 -5.15 0.0 111 491 171 567 0.22607 2.4e-005 245 3 M5772_1.02 RAX2 BTAATTRR 4.1e-002 5.4e-005 -9.82 0.0 211 493 306 574 0.42799 2.2e-007 246 3 M5807_1.02 SHOX2 YTAATTRR 1.9e0000 2.5e-003 -5.98 0.0 213 493 297 570 0.43205 1.0e-005 246 3 M5941_1.02 UNCX NTAATYBAATTAN 1.1e-003 1.4e-006 -13.47 0.0 218 488 316 555 0.44672 5.8e-009 243 3 M5944_1.02 VAX1 YTAATTAN 2.6e0000 3.5e-003 -5.66 0.0 251 493 338 565 0.50913 1.4e-005 246 3 M5945_1.02 VAX2 YTAATTAN 5.0e0000 6.7e-003 -5.01 0.0 225 493 310 573 0.45639 2.7e-005 246 3 M5998_1.02 (CREB5)_(Mus_musculus)_(DBD_1.00) DRTGACGTCATN 8.3e-002 1.1e-004 -9.11 0.0 171 489 160 332 0.34969 4.5e-007 244 3 M6114_1.02 FOXA1 WAWGYAAAYA 9.4e-009 1.3e-011 -25.10 0.0 161 491 280 587 0.32790 5.1e-014 245 3 M6141_1.02 ALX1 TAATBYAATTAY 2.8e0000 3.8e-003 -5.57 0.0 145 489 209 548 0.29652 1.6e-005 244 3 M6167_1.02 CDX1 HCATAAAD 3.3e-006 4.4e-009 -19.24 0.0 199 493 320 594 0.40365 1.8e-011 246 3 M6174_1.02 CEBPZ AGCCAATSAGH 2.6e0000 3.5e-003 -5.65 0.0 264 490 315 498 0.53878 1.4e-005 244 3 M6182_1.02 CRX YTAATCHB 6.2e-001 8.2e-004 -7.10 0.0 23 493 54 586 0.04665 3.3e-006 246 3 M6228_1.02 FOSB CTGACTCAYV 3.3e-010 4.4e-013 -28.46 0.0 151 491 268 575 0.30754 1.8e-015 245 3 M6234_1.02 FOXA3 RVWAARYAAAYAD 1.4e-010 1.9e-013 -29.28 0.0 162 488 291 592 0.33197 7.9e-016 243 3 M6235_1.02 FOXC1 CYWAAGTAAACAWHG 3.7e-011 5.0e-014 -30.63 0.0 160 486 267 533 0.32922 2.1e-016 242 3 M6236_1.02 FOXC2 YCTRDSWAAACAAAC 8.5e0000 1.1e-002 -4.47 0.0 100 486 139 494 0.20576 4.7e-005 242 3 M6237_1.02 FOXD3 AAACAAACA 3.4e-007 4.5e-010 -21.52 0.0 134 492 237 583 0.27236 1.8e-012 245 3 M6238_1.02 FOXF1 WAAATAAACAW 7.9e-013 1.1e-015 -34.49 0.0 134 490 249 560 0.27347 4.3e-018 244 3 M6239_1.02 FOXF2 HWADGTAAACA 3.2e-006 4.3e-009 -19.27 0.0 132 490 229 576 0.26939 1.7e-011 244 3 M6240_1.02 FOXI1 RRCCAATCAVAR 4.7e-007 6.3e-010 -21.18 0.0 189 489 265 488 0.38650 2.6e-012 244 3 M6241_1.02 FOXJ2 WAAAYAAAYA 1.3e-009 1.7e-012 -27.09 0.0 133 491 244 581 0.27088 7.0e-015 245 3 M6242_1.02 FOXJ3 TAAACAWWAAMMA 5.4e-005 7.2e-008 -16.44 0.0 114 488 191 542 0.23361 3.0e-010 243 3 M6244_1.02 FOXM1 RWAAWCAMWCAAV 1.6e-006 2.1e-009 -19.96 0.0 110 488 207 597 0.22541 8.8e-012 243 3 M6245_1.02 FOXO1 AAAWWVWAAACAAVHH 3.8e-005 5.1e-008 -16.79 0.0 125 485 220 585 0.25773 2.1e-010 242 3 M6246_1.02 FOXO3 MKGWAAACAARYM 6.2e-005 8.2e-008 -16.31 0.0 138 488 238 594 0.28279 3.4e-010 243 3 M6247_1.02 FOXO4 MRTAAACAA 1.8e-007 2.4e-010 -22.16 0.0 122 492 223 588 0.24797 9.7e-013 245 3 M6249_1.02 FOXP3 AAWCAMATT 9.2e-001 1.2e-003 -6.69 0.0 104 492 170 586 0.21138 5.1e-006 245 3 M6250_1.02 FOXQ1 AAATAAACAATD 6.4e-004 8.5e-007 -13.97 0.0 137 489 195 483 0.28016 3.5e-009 244 3 M6251_1.02 FUBP1 TYGTNTTTTTTT 7.4e0000 9.9e-003 -4.61 0.0 147 489 223 590 0.30061 4.1e-005 244 3 M6256_1.02 GATA4 RSWGATAAV 8.1e-007 1.1e-009 -20.64 0.0 160 492 274 594 0.32520 4.4e-012 245 3 M6257_1.02 GATA5 WVANWGATAABTYRRHK 1.1e-001 1.5e-004 -8.83 0.0 180 484 268 567 0.37190 6.1e-007 241 3 M6258_1.02 GATA6 NWGATAA 9.6e-008 1.3e-010 -22.78 0.0 160 494 274 589 0.32389 5.2e-013 246 3 M6262_1.02 GFI1B WGCMGTGATTT 1.4e-047 1.9e-050 -114.48 0.0 86 490 265 591 0.17551 7.9e-053 244 3 M6263_1.02 GFI1 RCWSTGATTT 1.4e-067 1.9e-070 -160.53 0.0 103 491 327 598 0.20978 7.8e-073 245 3 M6269_1.02 HBP1 AYYCATTGA 4.4e0000 5.8e-003 -5.15 0.0 180 492 251 558 0.36585 2.4e-005 245 3 M6281_1.02 HNF1A KGKTAAWBATTAACY 4.9e0000 6.6e-003 -5.02 0.0 74 486 114 518 0.15226 2.7e-005 242 3 M6285_1.02 ONECUT1 WWTATTGATTTWDH 5.2e0000 6.9e-003 -4.97 0.0 119 487 165 507 0.24435 2.9e-005 243 3 M6289_1.02 HOXA9 WCATAAAYYRTH 1.7e-006 2.3e-009 -19.89 0.0 177 489 281 561 0.36196 9.4e-012 244 3 M6290_1.02 HOXA13 CCAATAAWAHC 4.1e-006 5.4e-009 -19.03 0.0 158 490 261 573 0.32245 2.2e-011 244 3 M6292_1.02 HOXA5 CATTAATYAR 3.5e-007 4.6e-010 -21.49 0.0 183 491 287 553 0.37271 1.9e-012 245 3 M6296_1.02 HOXB6 KKCATMAATCAWT 2.5e-006 3.3e-009 -19.53 0.0 144 488 206 466 0.29508 1.4e-011 243 3 M6297_1.02 HOXB7 MATYAATCAA 8.9e-011 1.2e-013 -29.76 0.0 133 491 220 501 0.27088 4.9e-016 245 3 M6298_1.02 HOXB8 BMATTAATCAA 8.6e-009 1.1e-011 -25.19 0.0 124 490 195 475 0.25306 4.7e-014 244 3 M6299_1.02 HOXC6 AAAGTAATAAATCAT 3.1e-008 4.1e-011 -23.91 0.0 106 486 138 353 0.21811 1.7e-013 242 3 M6300_1.02 HOXC8 GSBHATYAATSAAR 2.0e-005 2.6e-008 -17.46 0.0 193 487 295 556 0.39630 1.1e-010 243 3 M6301_1.02 HOXD10 AATTAAARCA 1.3e-003 1.7e-006 -13.28 0.0 113 491 196 586 0.23014 7.0e-009 245 3 M6303_1.02 HOXD4 TTAATTKW 4.9e0000 6.5e-003 -5.03 0.0 149 493 220 577 0.30223 2.7e-005 246 3 M6304_1.02 HOXD9 HMATNAAWYT 1.7e-005 2.2e-008 -17.62 0.0 137 491 233 578 0.27902 9.1e-011 245 3 M6327_1.02 LEF1 CTTTGWW 4.1e-002 5.4e-005 -9.82 0.0 104 494 179 597 0.21053 2.2e-007 246 3 M6333_1.02 MAFG HATGACT 8.0e-005 1.1e-007 -16.05 0.0 156 494 260 595 0.31579 4.3e-010 246 3 M6359_1.02 NFE2L1 NATGACD 8.7e-004 1.2e-006 -13.66 0.0 156 494 255 596 0.31579 4.8e-009 246 3 M6360_1.02 NFE2L2 VRTGACTCAGCA 5.2e0000 6.9e-003 -4.97 0.0 177 489 262 592 0.36196 2.9e-005 244 3 M6368_1.02 NFIL3 VKVMRTTACRTAAY 1.7e-001 2.3e-004 -8.38 0.0 191 487 212 416 0.39220 9.5e-007 243 3 M6375_1.02 NKX2-2 HAAVYACTTRAM 2.5e0000 3.3e-003 -5.71 0.0 129 489 187 538 0.26380 1.4e-005 244 3 M6399_1.02 ONECUT2 DKSWTKWTATKGATTTTWYYT 8.1e-001 1.1e-003 -6.83 0.0 154 480 182 429 0.32083 4.5e-006 239 3 M6401_1.02 OTX2 HYYTAATCCBWKHDM 1.0e0000 1.4e-003 -6.60 0.0 46 486 85 550 0.09465 5.6e-006 242 3 M6406_1.02 PAX2 RHTCAGTSAYGMGTGAYW 1.2e-002 1.7e-005 -11.01 0.0 149 483 227 546 0.30849 6.9e-008 241 3 M6412_1.02 PBX1 VHMATCAATCAAWTH 8.4e-002 1.1e-004 -9.09 0.0 170 486 258 572 0.34979 4.6e-007 242 3 M6413_1.02 PBX2 VMATCAATCAMWTYM 5.2e-012 7.0e-015 -32.59 0.0 122 486 241 590 0.25103 2.9e-017 242 3 M6415_1.02 PDX1 CTAATTACY 3.1e-002 4.1e-005 -10.10 0.0 202 492 275 527 0.41057 1.7e-007 245 3 M6416_1.02 CBFB YYTGTGGTYWB 5.2e-001 6.9e-004 -7.28 0.0 230 490 333 590 0.46939 2.8e-006 244 3 M6418_1.02 PITX2 DBTAATCCMA 6.0e-002 8.0e-005 -9.43 0.0 91 491 160 593 0.18534 3.3e-007 245 3 M6419_1.02 PKNOX1 HATCARTCAABYB 2.8e-005 3.8e-008 -17.10 0.0 160 488 261 572 0.32787 1.5e-010 243 3 M6439_1.02 PRRX1 TAAYCTG 3.0e-001 4.0e-004 -7.82 0.0 116 494 185 576 0.23482 1.6e-006 246 3 M6440_1.02 PRRX2 YTAATTR 7.8e0000 1.0e-002 -4.57 0.0 120 494 173 545 0.24291 4.2e-005 246 3 M6457_1.02 RUNX1 WAACCACARW 4.4e-002 5.9e-005 -9.74 0.0 251 491 364 591 0.51120 2.4e-007 245 3 M6459_1.02 RUNX3 AACCRCAAAMCMCV 4.0e0000 5.3e-003 -5.23 0.0 53 487 88 520 0.10883 2.2e-005 243 3 M6471_1.02 SOX13 YATTGTTY 5.1e-003 6.8e-006 -11.90 0.0 101 493 176 584 0.20487 2.8e-008 246 3 M6477_1.02 SOX5 WAACAATR 1.4e0000 1.8e-003 -6.30 0.0 147 493 226 591 0.29817 7.5e-006 246 3 M6490_1.02 SRY DAAACAAWR 4.9e-002 6.6e-005 -9.62 0.0 144 492 231 593 0.29268 2.7e-007 245 3 M6506_1.02 TCF7 VHSCTTTGWWST 6.1e0000 8.2e-003 -4.81 0.0 109 489 171 580 0.22290 3.4e-005 244 3 M6510_1.02 TEF TGTTTATRTAAMTK 8.5e-005 1.1e-007 -15.99 0.0 203 487 305 558 0.41684 4.7e-010 243 ## # Detailed descriptions of columns in this file: # # db: The name of the database (file name) that contains the motif. # id: A name for the motif that is unique in the motif database file. # alt: An alternate name of the motif that may be provided # in the motif database file. # consensus: A consensus sequence computed from the motif. # E-value: The expected number motifs that would have least one. # region as enriched for best matches to the motif as the reported region. # The E-value is the p-value multiplied by the number of motifs in the # input database(s). # adj_p-value: The probability that any tested region would be as enriched for # best matches to this motif as the reported region is. # By default the p-value is calculated by using the one-tailed binomial # test on the number of sequences with a match to the motif # that have their best match in the reported region, corrected for # the number of regions and score thresholds tested. # The test assumes that the probability that the best match in a sequence # falls in the region is the region width divided by the # number of places a motif # can align in the sequence (sequence length minus motif width plus 1). # When CentriMo is run in discriminative mode with a negative # set of sequences, the p-value of a region is calculated # using the Fisher exact test on the # enrichment of best matches in the positive sequences relative # to the negative sequences, corrected # for the number of regions and score thresholds tested. # The test assumes that the probability that the best match (if any) # falls into a given region # is the same for all positive and negative sequences. # log_adj_p-value: Log of adjusted p-value. # bin_location: Location of the center of the most enriched region. # bin_width: The width (in sequence positions) of the most enriched region. # A best match to the motif is counted as being in the region if the # center of the motif falls in the region. # total_width: The window maximal size which can be reached for this motif: # rounded(sequence length - motif length +1)/2 # sites_in_bin: The number of (positive) sequences whose best match to the motif # falls in the reported region. # Note: This number may be less than the number of # (positive) sequences that have a best match in the region. # The reason for this is that a sequence may have many matches that score # equally best. # If n matches have the best score in a sequence, 1/n is added to the # appropriate bin for each match. # total_sites: The number of sequences containing a match to the motif # above the score threshold. # p_success: The probability of falling in the enriched window: # bin width / total width # p-value: The uncorrected p-value before it gets adjusted to the # number of multiple tests to give the adjusted p-value. # mult_tests: This is the number of multiple tests (n) done for this motif. # It was used to correct the original p-value of a region for # multiple tests using the formula: # p' = 1 - (1-p)^n where p is the uncorrected p-value. # The number of multiple tests is the number of regions # considered times the number of score thresholds considered. # It depends on the motif length, sequence length, and the type of # optimizations being done (central enrichment, local enrichment, # score optimization).