Database and Motifs High-scoring Motif Occurences Debugging Information



FIMO - Motif search tool

FIMO version 4.12.0, (Release date: Tue Jun 27 16:22:50 2017 -0700)

For further information on how to interpret these results or to get a copy of the FIMO software please access http://meme.nbcr.net

If you use FIMO in your research, please cite the following paper:
Charles E. Grant, Timothy L. Bailey, and William Stafford Noble, "FIMO: Scanning for occurrences of a given motif", Bioinformatics, 27(7):1017-1018, 2011. [full text]


DATABASE AND MOTIFS

DATABASE /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/GFI1B.IDR0.05.filt.narrowPeak.top3000.summitPlusMinus250bp.MemeChipResultsDefaultMax/GFI1B.IDR0.05.filt.narrowPeak.top3000.summitPlusMinus250bp.fa
Database contains 3000 sequences, 1500000 residues

MOTIFS /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/MotifData/motif_databases/CIS-BP/Homo_sapiens.meme (DNA)

MOTIF WIDTH BEST POSSIBLE MATCH
M0085_1.02 10 TTGCCTGAGG
M0104_1.02 11 ATATTAATTAA
M0105_1.02 9 TTTTAATTG
M0108_1.02 11 GATAATATTGA
M0177_1.02 10 ACCATATGTT
M0178_1.02 10 AACAGCTGTT
M0189_1.02 8 GCACGTGA
M0195_1.02 10 ACCATATGGT
M0196_1.02 10 GGCACGTGTA
M0198_1.02 10 AGCCCGTGCG
M0199_1.02 13 TAACGACACGTGC
M0211_1.02 8 GCACGTGT
M0212_1.02 10 GGCACGTGCC
M0214_1.02 9 AACATATGT
M0216_1.02 10 CGCAGCTGTG
M0217_1.02 10 ACCATATGGT
M0300_1.02 10 AATGACGTCA
M0305_1.02 9 GCCACGTGT
M0307_1.02 8 ATACGTTT
M0395_1.02 8 GTACTAAT
M0396_1.02 10 AACGGTAGCA
M0398_1.02 11 AGGAAGTGCAA
M0404_1.02 10 AAGGGGGGCA
M0405_1.02 10 TGGGCGTGGC
M0408_1.02 10 ATGTGCACAT
M0413_1.02 10 GTTGCGGGAT
M0415_1.02 8 ATAACGGT
M0422_1.02 10 CCGGGGGGTC
M0424_1.02 10 TTTGACAGCT
M0428_1.02 8 AGGAGCAC
M0431_1.02 9 ACGGTAGCA
M0432_1.02 9 CGCGCGCAC
M0433_1.02 10 ATCTAGAACA
M0436_1.02 10 TTGTTTATTG
M0437_1.02 9 TATATATAT
M0442_1.02 9 AATGCAGTG
M0443_1.02 10 TGGGCGTGGC
M0594_1.02 9 ATTTGAATT
M0603_1.02 7 TTAGCGG
M0607_1.02 9 TCGTAAATA
M0608_1.02 10 GGGGGCGTAA
M0609_1.02 10 TCCCGCTGCC
M0610_1.02 9 ATCGCGTTA
M0629_1.02 11 AATGTATCAAT
M0630_1.02 10 AATGTATCAA
M0632_1.02 10 AATGTATCAA
M0633_1.02 10 TAATGTATTA
M0635_1.02 13 AACATGTATAAAA
M0714_1.02 10 AACCGGAAGT
M0718_1.02 10 ATGTAAACAA
M0719_1.02 8 GTAAACAA
M0728_1.02 12 AATAAACAAACA
M0736_1.02 8 GTAAACAA
M0737_1.02 10 TATGTAAACA
M0747_1.02 10 AATGTAAACA
M0756_1.02 9 GTAAACAAA
M0887_1.02 9 CCTAATGAG
M0890_1.02 8 GTAATCAA
M0891_1.02 10 TTAATTGGTT
M0892_1.02 10 CCTAATTACC
M0893_1.02 10 ATTAATTAAT
M0894_1.02 8 TTAATTAG
M0896_1.02 8 TTAATTAG
M0897_1.02 10 TTTTATGGGC
M0898_1.02 8 TTACGTAA
M0900_1.02 8 TTAATTGG
M0901_1.02 8 CTTGTCAA
M0905_1.02 9 TTAATTACC
M0906_1.02 10 AATTAATTAG
M0931_1.02 9 TAATTAATT
M0937_1.02 7 TGATACC
M0942_1.02 8 TTGTAATT
M0943_1.02 8 GCTAATTA
M0949_1.02 7 TTAATGA
M0952_1.02 8 TGATACCC
M0958_1.02 7 CTAATTA
M0961_1.02 9 CTAATTGGT
M0969_1.02 9 CTAATCAGC
M0975_1.02 9 TAATTAATT
M0994_1.02 9 ATGATACCC
M0996_1.02 7 GAAATCA
M0999_1.02 9 ATTAATTAC
M1007_1.02 9 TTTATGACC
M1012_1.02 9 TTAATGACT
M1016_1.02 7 GTGATAC
M1018_1.02 7 TAATTAA
M1025_1.02 8 GCTAATTA
M1027_1.02 9 TTAATTACC
M1030_1.02 9 ACCACTTAA
M1034_1.02 7 GCAATTA
M1039_1.02 9 GCTAATTGG
M1049_1.02 10 ATGATACCCC
M1070_1.02 9 TTAATGACC
M1071_1.02 8 TTAATGAC
M1073_1.02 9 TTAATGACC
M1110_1.02 10 GGGCAATAGA
M1125_1.02 10 GCTAATTGGT
M1157_1.02 10 TTTTATGACC
M1163_1.02 9 ATTAATTAC
M1266_1.02 10 GACCGAAACC
M1281_1.02 9 CTTACGCAA
M1358_1.02 9 TAACCCTAG
M1359_1.02 10 TTTTGCGCCA
M1418_1.02 8 TGGTACCA
M1432_1.02 10 ATTGACCTCT
M1458_1.02 10 ATTGACCTCG
M1507_1.02 10 AATTTTGGCT
M1528_1.02 10 CCATGGCAAC
M1529_1.02 10 CCATAGCAAC
M1545_1.02 9 CGTACGTCA
M1581_1.02 10 TTTGCTGACT
M1582_1.02 11 ATATATAATAA
M1583_1.02 8 TTCATTGA
M1589_1.02 10 GCAGAACAAT
M1592_1.02 8 AAAACAAT
M1594_1.02 10 CATTGTTTTT
M1601_1.02 9 ATTGTTTTC
M1605_1.02 10 ATTCATCTTT
M1628_1.02 11 AGGTGTGAAGA
M1668_1.02 12 TCCAAACGAGAT
M1838_1.02 15 CATTGCCTCAGGGCA
M1841_1.02 15 GAACATTCTGTTCTT
M1863_1.02 8 GTAAACAT
M1868_1.02 14 ACAGATAAGAATCT
M1871_1.02 10 TGGGTGGGGC
M1882_1.02 21 AAAGTGAAAGTGAAAGTAAAA
M1884_1.02 15 AGCTAAAAATAGCAT
M1889_1.02 10 AAGCACATGG
M1890_1.02 18 AGAGTGCTGATTGGTCCA
M1906_1.02 11 GGGGGCGGGGC
M1915_1.02 20 GCAAGGCATTATGGGAAATC
M1917_1.02 11 GGTCACGTGGC
M1919_1.02 12 CAAGATGGCGGC
M1925_1.02 11 TATTGTGCAAT
M1926_1.02 9 CAGGTGAGG
M1927_1.02 8 GCCACGTG
M1928_1.02 11 GGGAATTTCCC
M1929_1.02 15 CATGTCTGGGCATGT
M1934_1.02 20 AGGTCAGGGTGACCTGGGCC
M1950_1.02 6 GTGGAT
M1955_1.02 11 TTTCCAGGAAA
M1963_1.02 14 GGGGCCGAGGCCTG
M1968_1.02 11 TCCCTGGGGAC
M1970_1.02 6 TGCCAA
M2065_1.02 15 AGGTCAGGGTGACCT
M2264_1.02 8 GCCATCTG
M2267_1.02 11 TTTTATGGCTT
M2268_1.02 11 TATTGCACAAT
M2270_1.02 11 TAATTTAATCA
M2273_1.02 11 GGGCGGGAAGG
M2275_1.02 13 GAACCAGGAAGTG
M2277_1.02 11 ACAGGAAGTGG
M2278_1.02 11 TGTGACTCATT
M2281_1.02 11 TCCAATCCACA
M2283_1.02 15 CAAAAGTAAACAAAG
M2286_1.02 15 TGGACTTTGGACTCT
M2287_1.02 13 GGCCATAAATCAC
M2289_1.02 13 AAGATGATGTCAT
M2292_1.02 11 GGTGACTCATC
M2296_1.02 15 CTGAGTCAGCAATTT
M2299_1.02 13 AGGGACAGCTGCA
M2301_1.02 15 AAATGGACCAATCAG
M2303_1.02 15 TGACCTCTGACCTCT
M2305_1.02 11 TGCGCAGGCGC
M2306_1.02 13 TTCATTTGCATAT
M2307_1.02 15 AGAAAGTGAAAGTGA
M2310_1.02 15 CAAACCACAAACCCC
M2313_1.02 10 CCATTGTTTT
M2314_1.02 15 GGGAGGGGGCGGGGC
M2319_1.02 14 TTCCTTTGATCTTT
M2321_1.02 20 AGACATGCCCAGACATGCCC
M2323_1.02 15 CAGATCTCGCGAGAG
M2385_1.02 11 AAGTAAACAAA
M2387_1.02 10 GTGGGGTGAT
M2388_1.02 10 ATGGGGTGAT
M2390_1.02 8 CAGGAAGG
M2391_1.02 10 GGGGCGGGGC
M2392_1.02 19 GTTGCCATGGCAACCGCGG
M4344_1.02 8 GGTTGCTA
M4427_1.02 21 GTGGCCACCAGGGGGCGCTGT
M4428_1.02 14 AGAACATTCTGTTC
M4438_1.02 15 AGGTCATGGTGACCT
M4444_1.02 14 AGGGGATTTCCCAG
M4451_1.02 11 GGTCACGTGAC
M4452_1.02 15 TCTCGATATGACTCA
M4453_1.02 15 AAGAGGAAGTGAAAC
M4454_1.02 15 AAATCTCGCGAGAAC
M4459_1.02 20 GTGCGGGGGCGGGGGGGGGG
M4461_1.02 21 GCCTTCTGGGAATTGTAGTTC
M4462_1.02 11 CACCGGAAGTG
M4463_1.02 18 AATGTGGAAATGAGTCAG
M4467_1.02 15 ATGCCAAAAATAGCA
M4469_1.02 14 TCCATGGTGCTGAA
M4471_1.02 15 GCAGCCAAGCGTGAC
M4473_1.02 15 GCCGGCCAATCAGAG
M4476_1.02 15 TCATCTGTTGCTAGG
M4477_1.02 19 CTATGGCCATATAAGGCAA
M4478_1.02 20 CAGGTGATTTCCGGGAAATG
M4479_1.02 11 GCAGCAGCTGT
M4481_1.02 15 GGTCACGTGGCCCGG
M4484_1.02 15 CTGGGAATTGTAGTC
M4509_1.02 17 ATTTGCATAACAAAGGA
M4511_1.02 8 TGACCTCT
M4522_1.02 10 CCGGAAGTGG
M4525_1.02 15 AGCCTCAGGGCATGG
M4526_1.02 15 GGGGGGTGACTCATC
M4527_1.02 21 GGACTACAACTCCCAGCAGGC
M4532_1.02 10 CCACGTGCTC
M4536_1.02 15 GGGGAGGGCGCGCGG
M4537_1.02 15 GGCGGGAAATTTGAA
M4543_1.02 11 GGAACCACGTG
M4545_1.02 15 AGAAAGTGAAAGTGA
M4551_1.02 17 TTCATACTGGAGAGAAA
M4553_1.02 10 GGTCACGTGC
M4565_1.02 14 CAGGATGAGTCACC
M4567_1.02 15 GCAAAGTAAACATAG
M4569_1.02 18 GTCCCGGGTTCGAATCCC
M4572_1.02 15 TGCTGACTCAGCAAA
M4600_1.02 11 GCAGATAAGGA
M4604_1.02 21 GGGGAGGAGGGAGGGGAGGAG
M4612_1.02 15 CCGCCAGGGGGCGCC
M4619_1.02 11 GGGTGACTCAT
M4623_1.02 15 CGGTGACTCATCCTT
M4629_1.02 17 CATGACTCAGCAATTTT
M4635_1.02 15 GAAAATGAAACTGAA
M4636_1.02 21 CTGCCCTCATCCAAGATGGCG
M4640_1.02 15 GGGCAGGGGTCTCGG
M4665_1.02 15 CAGATAAGAATCTGT
M4680_1.02 8 GTCACGTG
M4681_1.02 10 TGCTGAGTCA
M4692_1.02 10 ACTACAACTC
M4698_1.02 15 CTGGACTTTGGACTC
M4702_1.02 8 TGACCTTT
M4708_1.02 10 TATGCAAATA
M4840_1.02 11 AAATGAGCAAC
M4850_1.02 21 TGTTGTGTCCGTGCCATCTGG
M4930_1.02 11 AAATCGTGACT
M4971_1.02 10 GTAACAGCTG
M5116_1.02 9 ACCACCTGT
M5209_1.02 11 GTGGGCGTGGC
M5234_1.02 10 GGTCACGTAC
M5284_1.02 10 GCTAATTAGC
M5287_1.02 13 CTAATTAAATTAA
M5291_1.02 13 TTAATTTAATTAA
M5292_1.02 13 GGATGATGCAATA
M5293_1.02 14 CGATGACGTCATCG
M5294_1.02 10 GTTAAACGGT
M5300_1.02 17 TAATCGGTATTTAATTG
M5302_1.02 14 TGATGACGTCATCA
M5303_1.02 17 TGCTTTCTAGGAATTCA
M5304_1.02 10 ACCATATGGT
M5307_1.02 12 AAACATATGTTT
M5308_1.02 10 ACCATATGTT
M5310_1.02 8 TTAATTGG
M5320_1.02 15 CCCGCATACAACGAA
M5321_1.02 10 AACACGTGTT
M5322_1.02 8 TTTTTATT
M5323_1.02 14 TGATGACGTCATCG
M5325_1.02 14 TGATGACGTGGCAT
M5335_1.02 18 ATCGATAATTTTATCGAT
M5339_1.02 10 GATAATTAGG
M5342_1.02 8 GTAATTGG
M5343_1.02 8 ATAATTAC
M5344_1.02 8 GTAATTGG
M5345_1.02 10 GTTAATCCGC
M5346_1.02 10 GCTAATCCGT
M5348_1.02 13 CTAATCTAATTAA
M5349_1.02 13 CTAATTTAATCAA
M5363_1.02 12 TTTCCCGCCAAA
M5377_1.02 12 AACCCGGAAGTG
M5388_1.02 10 GCTAATTAGC
M5390_1.02 10 GCTAATTGGG
M5394_1.02 10 GTTAATTGGA
M5398_1.02 10 ACCGGAAGTG
M5414_1.02 10 GTTAATTGGT
M5420_1.02 10 ACCGGAAGTA
M5421_1.02 11 AACCGGAAATA
M5422_1.02 10 ACCGGAAGTG
M5425_1.02 15 CCGGAAGCGGAAGTG
M5427_1.02 10 GCTAATTACC
M5428_1.02 10 GCTAATTACC
M5430_1.02 10 AACACCTGTT
M5435_1.02 14 TCGCTGTGTCATTC
M5445_1.02 14 AGTAAATATTTTTT
M5446_1.02 7 GTAAACA
M5460_1.02 7 GTAAACA
M5471_1.02 14 GTAAACATGTTTAC
M5480_1.02 10 GCTAATTAGT
M5481_1.02 10 GCTAATTGGT
M5487_1.02 10 TATGCGGGTA
M5490_1.02 16 GCTTCGTGGGGGGTCT
M5491_1.02 14 CTTCGCGGGGGGTC
M5493_1.02 8 GTACGTAA
M5497_1.02 17 AACCGGTTTAACCGGTT
M5500_1.02 10 GCTAATCCCT
M5501_1.02 10 CCTAATCCGC
M5502_1.02 10 TTTAATTAGG
M5503_1.02 10 TTTAATTAGT
M5504_1.02 12 TGGCACGTGCCG
M5506_1.02 12 TGGCACGTGCCA
M5509_1.02 10 GGCACGTGTC
M5512_1.02 9 GGTGGGCAT
M5517_1.02 10 ACTAGTTAAC
M5518_1.02 11 TTTTAATTGCT
M5519_1.02 11 TTTTAATTGGT
M5520_1.02 11 TGTTAATTGCT
M5530_1.02 12 TATAATCGTTTT
M5541_1.02 10 GTTAATTACT
M5542_1.02 10 GCTAATTAGT
M5543_1.02 10 TTTAATTAGT
M5544_1.02 10 TTTTTATGGG
M5547_1.02 11 GGTCGTAAAAT
M5551_1.02 9 TTTTATTAC
M5553_1.02 10 CCAATAAAAA
M5555_1.02 10 GTCGTAAAAA
M5557_1.02 9 GTAATAAAA
M5563_1.02 10 GCTAATTAGC
M5567_1.02 13 GAACGTTCTAGAA
M5568_1.02 15 TTCGAAACGTTCGAA
M5571_1.02 10 GACAGGTGTA
M5581_1.02 12 CATGTCATGTAA
M5582_1.02 12 CATGTCATGTAA
M5583_1.02 8 TTAAGTGC
M5584_1.02 13 TTAATCTAATTAA
M5587_1.02 9 ATGACTCAT
M5591_1.02 18 CAAAAAGGGGCGTGGCAT
M5592_1.02 14 AAGGGGGCGTGGCC
M5593_1.02 11 GGGGGCGTGGC
M5594_1.02 13 CTCGACCTAATTA
M5602_1.02 8 TTAATTGG
M5604_1.02 8 TTAATTAA
M5605_1.02 8 TTAATTAA
M5616_1.02 12 GCTATAAATAGC
M5621_1.02 8 CCTGTCAA
M5623_1.02 10 GCTAATTAAC
M5624_1.02 10 AGTAATTAAC
M5627_1.02 10 CACAGGTGTT
M5628_1.02 8 AGGTGTGA
M5631_1.02 10 GTTAATTAGA
M5632_1.02 10 ATCACGTGAT
M5634_1.02 10 ACCACGTGCC
M5635_1.02 10 TTTAATTACT
M5636_1.02 10 AACAGCTGTT
M5637_1.02 18 TAATTGGTTTTTAATTGC
M5643_1.02 12 ACCGTTAAACGG
M5652_1.02 10 GCCATATGGT
M5653_1.02 10 GACATATGTT
M5660_1.02 15 TTGGCACGGTGCCAA
M5662_1.02 15 TTGGCACAGTGCCAG
M5664_1.02 15 TTGGCACCGTGCCAA
M5672_1.02 10 GCTAATTAGC
M5689_1.02 11 AATTTGCTGAC
M5690_1.02 10 AACATATGTT
M5691_1.02 10 ACCATATGTT
M5693_1.02 10 ACCATATGTT
M5697_1.02 14 ATTATTGATTTTTT
M5702_1.02 17 TGCAGTCATGCGTGACG
M5704_1.02 10 TAATCGATTA
M5705_1.02 8 CTAATTAG
M5709_1.02 10 TAATCGATTA
M5711_1.02 17 TGCAGTCATGCGTGACG
M5714_1.02 11 TAATTTAATTA
M5715_1.02 11 TAATTTAATTA
M5717_1.02 9 CTTAATCCC
M5720_1.02 9 CTTAATCCC
M5722_1.02 12 TGACACCTGTCA
M5729_1.02 9 ATTTGCATA
M5735_1.02 13 AAATTAGCATAAT
M5738_1.02 9 ATTTGCATA
M5740_1.02 14 ATGAATAATTAATG
M5743_1.02 16 ATGCATAATTAATGAG
M5744_1.02 9 ATTTGCATA
M5746_1.02 10 ATAATGAGCT
M5750_1.02 13 GGGGGCCTTGAAA
M5753_1.02 12 CAAGACGTCTTA
M5771_1.02 10 GTTAATTGGC
M5772_1.02 8 TTAATTGG
M5777_1.02 16 CGTTGCCATGGCAACG
M5782_1.02 9 GGATAATCC
M5804_1.02 15 GAGCAACAGGTGGTT
M5805_1.02 13 ATGCAACAGGTGG
M5807_1.02 8 TTAATTGG
M5815_1.02 12 ACAATAACATTG
M5825_1.02 15 AACACTACCATTGTT
M5835_1.02 16 AACAATGTTCATTGTT
M5838_1.02 16 AACAATGTGCAGTGTT
M5856_1.02 12 AGTGGGCGTGGC
M5857_1.02 11 ACCCGGATGTA
M5865_1.02 14 AAAAAGAGGAAGTA
M5873_1.02 10 AGGTGTGAAA
M5875_1.02 20 AGGTGTGAAAAAAGGTGTGA
M5880_1.02 19 AGGTGTGAAATTCACACCT
M5882_1.02 20 TTTCACACCTAGGTGTGAAA
M5883_1.02 16 TCACACCTTCACACCT
M5889_1.02 16 GGTGTGAATTCACACC
M5896_1.02 8 AGGTGTGA
M5903_1.02 12 AAAGATCAAAGG
M5932_1.02 10 GTCACGTGAT
M5934_1.02 12 TGACAGCTGTCA
M5935_1.02 12 TGACAGCTGTCA
M5941_1.02 13 CTAATTTAATTAG
M5944_1.02 8 CTAATTAC
M5945_1.02 8 CTAATTAC
M5949_1.02 8 CTAATTAT
M5955_1.02 11 TAATGGCGGAC
M5958_1.02 13 TATGTCGCGATAG
M5959_1.02 17 TTTCGCCTGGCACGTCA
M5962_1.02 12 TTCGGTGGTCGC
M5965_1.02 15 GCACAGCGGGGGGTC
M5967_1.02 19 ATGTTAAATGTAGATTAAG
M5970_1.02 17 GTCGTGTTGTGGGAAAG
M5971_1.02 14 TCGAGGCTAGACCA
M5972_1.02 17 GAGTATTATGGGATGGA
M5973_1.02 18 AGGTGTTCTGTTAACACT
M5974_1.02 12 GGGTTCGAGGGT
M5976_1.02 17 TTCGTGGCATTTTTCTA
M5977_1.02 10 GTGGGGGGGG
M5979_1.02 12 TGTGGGAAAAGC
M5980_1.02 10 AGGTAGGTAC
M5981_1.02 15 TTTTCAGTGTGTGCA
M5998_1.02 12 GATGACGTCATT
M6037_1.02 12 TTTGTCATGTAG
M6111_1.02 13 AGAAAGGGTTAAT
M6114_1.02 10 AAAGCAAACA
M6115_1.02 15 CATGTCTGGGCATGT
M6119_1.02 15 AAAAAGAGGAAGTGG
M6123_1.02 15 GGGGTGGGGGAGGGG
M6131_1.02 21 CCGGTTCAAACCGGTTCTGGC
M6139_1.02 9 GCACGCAAC
M6140_1.02 18 ATTGGTTTTATTGGTTAA
M6141_1.02 12 TAATTCAATTAT
M6144_1.02 10 GCCCCCGGGC
M6146_1.02 14 ACGCGCCTCGGGCG
M6147_1.02 22 TTTAATTTGATTTCGATTAATT
M6149_1.02 13 TGTTAGTATTGTG
M6150_1.02 12 GCCTCCCACGCC
M6151_1.02 8 TCACGTGC
M6152_1.02 10 GTGACGTCAC
M6154_1.02 12 TAAGGAAGAAGG
M6155_1.02 12 GTGGTGACGTGG
M6157_1.02 10 TCATTAATTG
M6159_1.02 16 TTCCTAGAAAGCTTTT
M6161_1.02 20 ACCGGGTCACGTGCAGAAGG
M6162_1.02 14 GGGTCACGTGTCCA
M6163_1.02 12 TTTGTTGTTTTC
M6164_1.02 25 ACATAGTGACACCTAGGTGTGAAAT
M6166_1.02 15 ATTATGTTAAATCAC
M6167_1.02 8 ACATAAAT
M6171_1.02 11 AATTGTGCAAT
M6172_1.02 12 AAGATTGCGCAA
M6173_1.02 13 CAGATTGCAAAAT
M6174_1.02 11 AGCCAATCAGC
M6176_1.02 12 TGACCTTTGACC
M6180_1.02 9 GTGACGTCA
M6181_1.02 11 CACTGACGTCA
M6182_1.02 8 CTAATCCC
M6184_1.02 14 AGGGGGATCGATGG
M6185_1.02 7 CGTTGGC
M6186_1.02 11 TGTTACATAAC
M6187_1.02 13 GGGGATTGCATTT
M6188_1.02 8 ATAATTAT
M6189_1.02 10 GATAATTACA
M6191_1.02 10 GGCGCGAAAC
M6192_1.02 10 CGCGCGAAAC
M6194_1.02 10 CGCGCCAAAC
M6196_1.02 13 TAAGGCGCGAAAA
M6197_1.02 9 CGTGACGTC
M6199_1.02 11 GGCGTGGGCGG
M6200_1.02 11 AGAGTGGGTGT
M6201_1.02 11 GGCGGCAGGGC
M6204_1.02 15 TAGCAGGAAGTGAGT
M6205_1.02 14 GGCAAACAGGAAAT
M6206_1.02 11 ATAAGGAAGTA
M6207_1.02 9 ACCGGAAGT
M6208_1.02 12 CCCAGGAAGTGC
M6210_1.02 13 TGCCCACGTGGTG
M6211_1.02 14 CGGGGATACGAAAT
M6212_1.02 13 CCCACGTACGCAC
M6213_1.02 11 ACCGGAAATCC
M6215_1.02 9 TGACCTTGA
M6216_1.02 9 TGACCTTGA
M6221_1.02 11 GCGGGAAGTGG
M6222_1.02 8 CAGGAAGT
M6223_1.02 13 GACAGGAAGTAAC
M6224_1.02 17 GCCACAGGAAGTAACAC
M6225_1.02 16 AAGATAAGATAAGATA
M6226_1.02 10 CAGGAAATAA
M6228_1.02 10 CTGACTCATC
M6234_1.02 13 GCAAAGCAAACAA
M6235_1.02 15 CTTAAGTAAACAATG
M6236_1.02 15 TCTGGCAAAACAAAC
M6237_1.02 9 AAACAAACA
M6238_1.02 11 AAAATAAACAT
M6239_1.02 11 AAAAGTAAACA
M6240_1.02 12 AACCAATCAGAG
M6241_1.02 10 TAAATAAACA
M6242_1.02 13 TAAACAAAAACAA
M6244_1.02 13 AAAAACAAACAAC
M6245_1.02 16 AAAAAGTAAACAAACC
M6246_1.02 13 AGGTAAACAAACA
M6247_1.02 9 AATAAACAA
M6249_1.02 9 AAACAAATT
M6250_1.02 12 AAATAAACAATT
M6251_1.02 12 TTGTGTTTTTTT
M6256_1.02 9 ACAGATAAC
M6257_1.02 17 TAAGAGATAACTTAGAT
M6258_1.02 7 AAGATAA
M6259_1.02 14 CACATGCGGGTATT
M6262_1.02 11 TGCAGTGATTT
M6263_1.02 10 GCTGTGATTT
M6264_1.02 11 CTGGGTGGTCT
M6265_1.02 11 GTGGGTGGTCT
M6266_1.02 11 TTGGGTGGTCC
M6267_1.02 10 GTGGGGGGTA
M6268_1.02 12 AATGCCAGACGC
M6269_1.02 9 ATTCATTGA
M6270_1.02 20 AGGGACGCAGCTGCTCCCCA
M6271_1.02 13 GGGCTCGTGGCGG
M6272_1.02 16 AGGCCACGTGCCGGAT
M6273_1.02 17 GGGGGCACGTGGCATTA
M6274_1.02 9 GGGTTGCCC
M6275_1.02 12 GCGTACGTGCGG
M6276_1.02 16 GCGCTAGCGGACGTTA
M6277_1.02 13 CTGTTACATAATC
M6278_1.02 12 TAGGGCTGCAAA
M6279_1.02 7 AAAATAC
M6280_1.02 15 AATAATCGCGAATAT
M6281_1.02 15 GGTTAATTATTAACC
M6282_1.02 14 GTTAATCATTAACC
M6285_1.02 14 TTTATTGATTTTTT
M6287_1.02 14 AGAATGTTCTAGAA
M6289_1.02 12 TCATAAATTATC
M6290_1.02 11 CCAATAAAACC
M6291_1.02 10 CATCCATCAA
M6292_1.02 10 CATTAATCAA
M6293_1.02 15 TCCAATCTATTGATT
M6295_1.02 10 CCATCCATCA
M6296_1.02 13 TGCATCAATCATT
M6297_1.02 10 CATTAATCAA
M6298_1.02 11 GCATTAATCAA
M6299_1.02 15 AAAGTAATAAATCAT
M6300_1.02 14 GGGCATCAATCAAA
M6301_1.02 10 AATTAAAGCA
M6302_1.02 11 TCCCTAATAAA
M6303_1.02 8 TTAATTGA
M6304_1.02 10 TAATTAAATT
M6306_1.02 12 TGTCAGGGGGCA
M6308_1.02 14 GGAAAGTGAAAGCA
M6309_1.02 17 GGAAAGCGAAACTGAAA
M6311_1.02 20 TAAAGGAAAGCCAAAAGTGA
M6312_1.02 10 GAAAGTGAAA
M6313_1.02 15 GAGAAAGTGAAACTG
M6314_1.02 12 GAAAGCGAAACT
M6315_1.02 7 GTTAATG
M6316_1.02 9 CCAGGTGCA
M6321_1.02 17 GGCGGGGAGGTGGGGGC
M6322_1.02 11 CAGGGTGTGGC
M6323_1.02 15 TGCCTGGGTGTGGCT
M6324_1.02 10 TGGGTGGGGC
M6325_1.02 8 GGGGGCGG
M6326_1.02 9 CAGGGGGTG
M6327_1.02 7 CTTTGAT
M6328_1.02 13 CACTTTTAATTAG
M6329_1.02 13 AAAATTAATTAAT
M6330_1.02 21 GTGCTGACCCCGCAGCCTTCG
M6331_1.02 9 TGCTGACGG
M6332_1.02 8 TTGCTGAC
M6333_1.02 7 CATGACT
M6336_1.02 17 GGGGGGGGGAGGGAGGG
M6337_1.02 11 GGGGCCGGAGG
M6338_1.02 17 TACAACAACCTGTTCTT
M6339_1.02 7 CTCCGGG
M6342_1.02 12 GCTAAAAATAGC
M6343_1.02 13 CATAAAACTGTCA
M6344_1.02 13 TGACAGCTGTCAA
M6345_1.02 10 ATCACATGAC
M6346_1.02 19 CCACGGCGGTGTCACATGC
M6347_1.02 7 TAATTGT
M6348_1.02 17 AGTGCCGTGTGCAAAAC
M6349_1.02 10 TCAACCTGCA
M6350_1.02 7 CAGTTGG
M6352_1.02 8 CCACGTGG
M6353_1.02 7 GCAGCTG
M6354_1.02 9 GACAGCTGC
M6355_1.02 13 TGACAGCTGCTGC
M6356_1.02 9 GGTGGGGAA
M6357_1.02 8 TTTAATGG
M6358_1.02 12 CGGCAGATGGCC
M6359_1.02 7 AATGACT
M6360_1.02 12 CATGACTCAGCA
M6361_1.02 13 ATGGAAATTTCCA
M6363_1.02 9 AATTTTCCA
M6364_1.02 9 AGTTTTCCA
M6365_1.02 10 AAATTTTCCT
M6366_1.02 15 CATGGATTTTTCCAC
M6368_1.02 14 ATGCATTACATAAC
M6370_1.02 11 GGAATCTCCCT
M6373_1.02 14 CAGCCAATCAGCGC
M6374_1.02 10 CTCAAGTGCT
M6375_1.02 12 AAACCACTTAAA
M6376_1.02 7 TCAAGTG
M6377_1.02 9 TTCAAGGAC
M6378_1.02 13 AATAAGTATATAA
M6379_1.02 11 AGTTAAGTGGA
M6380_1.02 9 TTAATTGGT
M6381_1.02 10 TCTCCCACGC
M6382_1.02 14 TTTGACCTACTTTT
M6383_1.02 19 CGTTGACCTTTGACCTTTA
M6384_1.02 14 AGGTCATTGACCCT
M6385_1.02 19 CTGAACTTTTTTGACCTCA
M6387_1.02 18 CTGAACTTTCCTGACCCC
M6389_1.02 13 CTGACCTCTGGCC
M6391_1.02 14 TGACTTTTGACTTT
M6392_1.02 18 TCAATTGAACTTTGTCCT
M6393_1.02 9 GTGACCTTT
M6394_1.02 9 GTGACCTTT
M6395_1.02 10 CTGACCTTTG
M6396_1.02 10 TGGCCTTGAA
M6397_1.02 13 TGACCTTGAACTT
M6399_1.02 21 GTCTTGTTATTGATTTTTTTT
M6400_1.02 8 CTAATCCT
M6401_1.02 15 CTTTAATCCCTTAAC
M6402_1.02 9 TGTAACTGT
M6406_1.02 18 GTTCAGTCATGCGTGACA
M6410_1.02 11 TCAAGCGTGAA
M6411_1.02 14 GTCACTGAAGCGGG
M6412_1.02 15 CCCATCAATCAAATT
M6413_1.02 15 CCATCAATCAATTTA
M6415_1.02 9 CTAATTACC
M6416_1.02 11 TCTGTGGTTTG
M6417_1.02 13 ATATATTCATGAG
M6418_1.02 10 TTTAATCCCA
M6419_1.02 13 CATCAATCAAGCT
M6420_1.02 17 GGGGGCATCAGGAGGGG
M6422_1.02 10 CGGGGGGCCC
M6423_1.02 9 ATTTGCATA
M6425_1.02 14 TTTGCATTACAATG
M6426_1.02 10 CATAAATAAT
M6427_1.02 13 CAGCTCATTAATA
M6429_1.02 13 CATAATTTATGCA
M6430_1.02 7 TGACCTT
M6432_1.02 14 TGACCTTTGTCCTA
M6433_1.02 18 GTGACCTTTGACCTACTT
M6436_1.02 13 TACAGACTGTTCT
M6438_1.02 15 GAGTAATTAATATAA
M6439_1.02 7 TAATCTG
M6440_1.02 7 TTAATTG
M6441_1.02 21 GGACAGCTGTTCTGTTTCCTG
M6442_1.02 17 CCCTGCCCCCCCCTTCC
M6443_1.02 7 TGACCTC
M6445_1.02 11 GCCCTGACCTC
M6446_1.02 20 GTGACCTCTGGGTGACCCCC
M6448_1.02 12 GGGGGATTTCCC
M6449_1.02 12 TGGGGATTTCCC
M6451_1.02 12 GTTGCTAGGGAA
M6453_1.02 14 TTACCATGGCAACC
M6454_1.02 12 TGACCTAGTTTT
M6455_1.02 13 CTGACCTACTTTT
M6456_1.02 22 GGGGGGGGGGGTGGTTTGGGGT
M6457_1.02 10 TAACCACAAA
M6459_1.02 14 AACCACAAAACCCA
M6461_1.02 10 TGTGACCTCA
M6462_1.02 13 GTGACCTTTGACC
M6463_1.02 12 AGCCTGTCTGCC
M6464_1.02 11 GTGTCCGTCTG
M6465_1.02 10 GTGTCTGGCC
M6466_1.02 9 TGTCTGGCC
M6468_1.02 8 CCAGGTGG
M6469_1.02 7 TCAGGTG
M6470_1.02 7 TCTTTGT
M6471_1.02 8 CATTGTTC
M6472_1.02 7 CATTGTT
M6473_1.02 18 CAACAATCTTCATTGTCC
M6474_1.02 19 GGAAAAGAACAATGGGTTC
M6475_1.02 16 ATTTGCATAACAATGG
M6476_1.02 12 GAGAACAAAGCG
M6477_1.02 8 TAACAATA
M6478_1.02 11 AGAACAATGGG
M6482_1.02 20 GGGGGGGGGCGGGGCCGGGG
M6483_1.02 24 GGGGCCAGGGGGGGGGCGGGGCCG
M6485_1.02 12 AAAAAGAGGAAG
M6486_1.02 16 CGGCTGTTACCCTGGG
M6490_1.02 9 AAAACAAAA
M6491_1.02 12 TTTCCAGGAATT
M6492_1.02 13 TTTTCTAGGAATT
M6496_1.02 13 TTTCCCAGAAAAG
M6497_1.02 13 TTCCCAGGAATTT
M6498_1.02 9 TGACCTTGA
M6499_1.02 9 CGTGGGAAA
M6500_1.02 12 GACCATCTGTTC
M6503_1.02 25 GTCGCTTTTCACACCTCTGATGGCA
M6504_1.02 24 AGGTAGAGAATTAGGTGATAAAAA
M6505_1.02 8 AGGTGTGA
M6506_1.02 12 GCGCTTTGTTCT
M6507_1.02 14 CACATTCCTGCGCC
M6508_1.02 15 GATATTTCTGCTCTA
M6509_1.02 12 AAAAATAGCTCT
M6510_1.02 14 TGTTTATGTAAATG
M6513_1.02 11 GCCAGCTGCGG
M6514_1.02 16 GCCTGAACTGGCCAGA
M6515_1.02 14 AAATGGCGGGAAAC
M6516_1.02 11 GACCATCTGGT
M6517_1.02 10 GGTCATGTGG
M6518_1.02 9 GGTCACGTG
M6519_1.02 16 CAGGTGACACCTGACA
M6521_1.02 10 CTGACCTGAA
M6523_1.02 17 TGACCTGACCTGACCTC
M6525_1.02 11 CGCCAAGGAGC
M6527_1.02 10 ACCCAGGTGG
M6529_1.02 7 TTTCTGG
M6532_1.02 7 TGACCTC
M6534_1.02 11 TTAGCTAATTA
M6535_1.02 13 GCGGGGGCGGGGG
M6536_1.02 12 GACGTGTCATTA
M6537_1.02 11 GGGGATTGGCC
M6539_1.02 22 CGGAGAGGGGGAGGGGGGGGGC
M6540_1.02 15 CAATAGCGGTGGTGG
M6542_1.02 13 AGATGATAGAGCC
M6544_1.02 12 GGGGATTTCCCA
M6545_1.02 14 GGTAGGGAAACCCC
M6546_1.02 11 ATTAATAATTA
M6547_1.02 19 GAGGGCCCCAGGCCTCGGC
M6548_1.02 9 GGGGTGGTC
M6549_1.02 9 GGGGTGGTC
M6550_1.02 9 TGGGTGGTC
M6552_1.02 15 GGGGTGGGGGAGGGG
M6553_1.02 12 GAGGGGGGCGGA
M6554_1.02 14 TCCAGATGTTTCGG
M6555_1.02 9 CGATAATGA
M6556_1.02 24 GGGCAACAAATCCCTGCGCCCCGT
M6557_1.02 12 GGAAAAAATCGG
M6558_1.02 15 GCACCCTTGGGTGCC
M6559_1.02 16 CCCACGGTTACTGCCG

Random model letter frequencies (/srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/GFI1B.IDR0.05.filt.narrowPeak.top3000.summitPlusMinus250bp.MemeChipResultsDefaultMax/background):
A 0.276 C 0.224 G 0.224 T 0.276


SECTION I: HIGH-SCORING MOTIF OCCURENCES

Motif ID Alt ID Sequence Name Strand Start End p-value q-value Matched Sequence
M6419_1.02 PKNOX1 chr15 + 67779627 67779639 1.25e-07 0.365 CATCAGTCAAGTC
M6419_1.02 PKNOX1 chr5 - 123809722 123809734 6.45e-07 0.585 CATCTGTCAAGCC
M6419_1.02 PKNOX1 chr11 + 86570239 86570251 7.16e-07 0.585 CATCAATCAACCG
M6419_1.02 PKNOX1 chr5 - 82406611 82406623 1.13e-06 0.585 CATCAATCACGTC
M6419_1.02 PKNOX1 chr5 - 126595087 126595099 1.15e-06 0.585 CATCAATCAGCCC
M6419_1.02 PKNOX1 chr9 + 87140790 87140802 1.27e-06 0.585 CATCAATCACGCG
M6419_1.02 PKNOX1 chr14 - 21694491 21694503 1.56e-06 0.585 AATCAATCAATCC
M6419_1.02 PKNOX1 chr1 - 228664635 228664647 1.73e-06 0.585 AATCAATCAATCT
M6419_1.02 PKNOX1 chr15 + 23483738 23483750 1.8e-06 0.585 catctgtcaagtt
M6419_1.02 PKNOX1 chr1 + 85050960 85050972 2.13e-06 0.622 tatcagtcaatct
M6419_1.02 PKNOX1 chr3 - 61895256 61895268 2.7e-06 0.655 CATCAATCACTTT
M6419_1.02 PKNOX1 chr10 + 63713458 63713470 3.13e-06 0.655 CATCAATCAGTTT
M6419_1.02 PKNOX1 chr14 - 21694691 21694703 3.58e-06 0.655 CATCAATCAAGAT
M6419_1.02 PKNOX1 chr17 + 51435855 51435867 3.9e-06 0.655 CAGCAGTCAATCC
M6419_1.02 PKNOX1 chr10 + 7433040 7433052 4.27e-06 0.655 aatcaatcaaccg
M6419_1.02 PKNOX1 chr1 + 153490770 153490782 4.31e-06 0.655 cagcagtcaatct
M6419_1.02 PKNOX1 chr5 - 123157801 123157813 4.66e-06 0.655 AATCAATCAAGTG
M6419_1.02 PKNOX1 chr2 - 12304600 12304612 5.06e-06 0.655 CATCAATCAATGC
M6419_1.02 PKNOX1 chr14 + 58805111 58805123 5.31e-06 0.655 AATCAGTCAGTCT
M6419_1.02 PKNOX1 chr12 + 71439051 71439063 5.55e-06 0.655 CATCTGTCACTCT
M6419_1.02 PKNOX1 chr8 + 37302950 37302962 5.6e-06 0.655 CATCTGTCAGTCC
M6419_1.02 PKNOX1 chr1 - 232732579 232732591 5.6e-06 0.655 CAGCAATCAATCT
M6419_1.02 PKNOX1 chr12 - 71627662 71627674 6.04e-06 0.655 AATCAGTCAGGTT
M6419_1.02 PKNOX1 chr10 + 665772 665784 6.2e-06 0.655 CATCAATCAAACG
M6419_1.02 PKNOX1 chr10 - 109996820 109996832 6.44e-06 0.655 CATCAGTCACACC
M6419_1.02 PKNOX1 chr1 + 208184584 208184596 6.98e-06 0.655 CTTCAGTCAATCT
M6419_1.02 PKNOX1 chr10 - 129441090 129441102 7.26e-06 0.655 TATCAGTCACCCT
M6419_1.02 PKNOX1 chr8 + 37613449 37613461 7.61e-06 0.655 TATCAGTCAGTCT
M6419_1.02 PKNOX1 chr6 - 149235386 149235398 7.83e-06 0.655 CATCTATCACGTT
M6419_1.02 PKNOX1 chr1 + 62356478 62356490 7.92e-06 0.655 catcagtcagggt
M6419_1.02 PKNOX1 chr5 - 80645073 80645085 7.92e-06 0.655 CAGCAGTCAGGCT
M6419_1.02 PKNOX1 chr21 - 32844926 32844938 8.07e-06 0.655 CATCAATCACGGC
M6419_1.02 PKNOX1 chr15 - 76345525 76345537 8.57e-06 0.655 CATCAATCAGACC
M6419_1.02 PKNOX1 chr4 + 176238382 176238394 8.81e-06 0.655 CAGCAGTCAATTT
M6419_1.02 PKNOX1 chr15 - 76954974 76954986 9.21e-06 0.655 CTTCAATCAAGTT
M6419_1.02 PKNOX1 chr9 + 85742373 85742385 9.43e-06 0.655 AATCAGTCACTTT
M6419_1.02 PKNOX1 chr20 + 58907184 58907196 9.62e-06 0.655 AATCTATCAACCC
M6419_1.02 PKNOX1 chr3 - 124429453 124429465 1e-05 0.655 CATCTGTCACCTC
M6419_1.02 PKNOX1 chr22 - 27212885 27212897 1.03e-05 0.655 CATCCATCAACTC
M6419_1.02 PKNOX1 chr8 - 28445338 28445350 1.03e-05 0.655 CATCTGTCAAACC
M6419_1.02 PKNOX1 chrX + 24145756 24145768 1.04e-05 0.655 aatcaatcacttc
M6419_1.02 PKNOX1 chr6 - 11094718 11094730 1.04e-05 0.655 AATCAATCACTTC
M6419_1.02 PKNOX1 chr6 + 111567118 111567130 1.05e-05 0.655 CAGCAATCAATTT
M6419_1.02 PKNOX1 chr3 - 72906080 72906092 1.07e-05 0.655 AATCAGTCAAGAC
M6419_1.02 PKNOX1 chr19 + 39431568 39431580 1.13e-05 0.655 aatcagtcaggtg
M6419_1.02 PKNOX1 chr10 - 7302621 7302633 1.13e-05 0.655 AATCAATCACTTT
M6419_1.02 PKNOX1 chr8 - 71711598 71711610 1.13e-05 0.655 AATCAGTCAGGTG
M6419_1.02 PKNOX1 chr10 + 12406061 12406073 1.14e-05 0.655 CATCAATCAAATG
M6419_1.02 PKNOX1 chr8 + 37329865 37329877 1.14e-05 0.655 TATCTGTCAACCT
M6419_1.02 PKNOX1 chr2 + 47534367 47534379 1.15e-05 0.655 CAGCTGTCAAGCT
M6419_1.02 PKNOX1 chr17 - 37488391 37488403 1.15e-05 0.655 CTTCAGTCAATTC
M6419_1.02 PKNOX1 chr6 + 149705043 149705055 1.2e-05 0.655 aatcaatcaaact
M6419_1.02 PKNOX1 chr1 + 229221536 229221548 1.21e-05 0.655 CATCTGTCAAGAC
M6419_1.02 PKNOX1 chr7 - 69934772 69934784 1.21e-05 0.655 CATCTGTCAAGAC
M6419_1.02 PKNOX1 chr3 + 156817358 156817370 1.24e-05 0.662 AAGCAATCAAGCT
M6419_1.02 PKNOX1 chr5 - 171684522 171684534 1.43e-05 0.741 CAGCTATCAAGCT
M6419_1.02 PKNOX1 chr17 + 60173541 60173553 1.44e-05 0.741 CATCAGTCAGCAC
M6419_1.02 PKNOX1 chr1 + 31932569 31932581 1.47e-05 0.744 AATCTGTCAACTC
M6419_1.02 PKNOX1 chr4 + 183334037 183334049 1.53e-05 0.749 CCTCAGTCACTCT
M6419_1.02 PKNOX1 chr3 + 60933928 60933940 1.54e-05 0.749 AATCTATCAGGCC
M6419_1.02 PKNOX1 chr19 + 39436647 39436659 1.58e-05 0.756 CCTCAGTCACCCT
M6419_1.02 PKNOX1 chr12 - 41984030 41984042 1.63e-05 0.76 CATAAATCAAGCC
M6419_1.02 PKNOX1 chr3 + 24365609 24365621 1.66e-05 0.76 CAGCAGTCAATTG
M6419_1.02 PKNOX1 chr7 + 41247472 41247484 1.76e-05 0.76 AATCAGTCACTTG
M6419_1.02 PKNOX1 chr12 - 3652259 3652271 1.8e-05 0.76 ATTCAATCAAGCT
M6419_1.02 PKNOX1 chr8 + 37547939 37547951 1.81e-05 0.76 TGTCAGTCACGCC
M6419_1.02 PKNOX1 chr1 + 198763532 198763544 1.81e-05 0.76 CATCAATCAGTAT
M6419_1.02 PKNOX1 chr3 + 106345379 106345391 1.81e-05 0.76 CCTCAATCACTCT
M6419_1.02 PKNOX1 chr3 + 12445276 12445288 1.83e-05 0.76 CCTCAATCACGTC
M6419_1.02 PKNOX1 chr6 - 136116192 136116204 1.85e-05 0.76 AATCAGTCAACAC
M6419_1.02 PKNOX1 chr12 - 45324705 45324717 1.87e-05 0.76 AATCTGTCACTCC
M6419_1.02 PKNOX1 chr8 - 124200665 124200677 1.87e-05 0.76 AATCTGTCACTCC
M6419_1.02 PKNOX1 chr20 + 51934434 51934446 1.96e-05 0.769 CATCTGTCAATAC
M6419_1.02 PKNOX1 chr10 + 30070068 30070080 1.97e-05 0.769 AATCAATCAAATC
M6419_1.02 PKNOX1 chr2 + 27663635 27663647 2.01e-05 0.769 TCTCAATCAAGCT
M6419_1.02 PKNOX1 chr15 + 55825500 55825512 2.01e-05 0.769 tctcaatcaaGCT
M6419_1.02 PKNOX1 chr5 + 139490316 139490328 2.04e-05 0.769 tgtcagtcaggct
M6419_1.02 PKNOX1 chr2 + 60633973 60633985 2.05e-05 0.769 CGGCAGTCAACCC
M6419_1.02 PKNOX1 chr12 - 90065601 90065613 2.08e-05 0.769 CAGCAGTCACTTT
M6419_1.02 PKNOX1 chr3 - 124431811 124431823 2.14e-05 0.769 AATCAATCAACAC
M6419_1.02 PKNOX1 chr16 - 77409533 77409545 2.2e-05 0.769 AATCTGTCAGCCT
M6419_1.02 PKNOX1 chr17 + 39770093 39770105 2.29e-05 0.769 TATCAGTCACCTG
M6419_1.02 PKNOX1 chr10 - 100655460 100655472 2.3e-05 0.769 CAGCAGTCACGTG
M6419_1.02 PKNOX1 chr1 - 56438133 56438145 2.32e-05 0.769 CAGCAATCACTTC
M6419_1.02 PKNOX1 chr12 - 2891521 2891533 2.37e-05 0.769 AATCAGTCAGACC
M6419_1.02 PKNOX1 chr5 + 171684242 171684254 2.41e-05 0.769 CCTCAGTCACTTC
M6419_1.02 PKNOX1 chr12 + 46134321 46134333 2.44e-05 0.769 tagcaatcaatcc
M6419_1.02 PKNOX1 chr12 - 65630520 65630532 2.44e-05 0.769 AATCTATCACCCT
M6419_1.02 PKNOX1 chr12 + 45615376 45615388 2.51e-05 0.769 cataaatcaatcc
M6419_1.02 PKNOX1 chr1 - 28885216 28885228 2.51e-05 0.769 CAGCAGTCAGGTG
M6419_1.02 PKNOX1 chr17 - 34981868 34981880 2.51e-05 0.769 CATAAATCAATCC
M6419_1.02 PKNOX1 chr6 - 134673828 134673840 2.56e-05 0.769 CGTCTATCAAGTG
M6419_1.02 PKNOX1 chr15 - 65787898 65787910 2.6e-05 0.769 CATCAGTCAGTAG
M6419_1.02 PKNOX1 chr6 + 39059854 39059866 2.64e-05 0.769 CATCCATCACCTT
M6419_1.02 PKNOX1 chr10 + 79484197 79484209 2.72e-05 0.769 CAGCTGTCAGGCC
M6419_1.02 PKNOX1 chr17 - 65023027 65023039 2.72e-05 0.769 CTTCAGTCACTTC
M6419_1.02 PKNOX1 chr11 - 114259769 114259781 2.72e-05 0.769 CAGCAATCAGTTT
M6419_1.02 PKNOX1 chr6 - 137665607 137665619 2.79e-05 0.769 CATCCATCAGTTT
M6419_1.02 PKNOX1 chr5 + 124662463 124662475 2.82e-05 0.769 AATCAATCACACT
M6419_1.02 PKNOX1 chr1 + 41238606 41238618 2.89e-05 0.769 cctcaatcacttc
M6419_1.02 PKNOX1 chr9 + 86732399 86732411 2.93e-05 0.769 AAGCAGTCAATTT
M6419_1.02 PKNOX1 chr12 - 85834662 85834674 2.95e-05 0.769 CATAAATCAAGTT
M6419_1.02 PKNOX1 chr4 - 139555419 139555431 3e-05 0.769 ACTCAGTCAGGCC
M6419_1.02 PKNOX1 chr13 - 48727614 48727626 3.04e-05 0.769 ATTCAATCAAGTT
M6419_1.02 PKNOX1 chr14 + 95700244 95700256 3.09e-05 0.769 CCTCAATCAAGGC
M6419_1.02 PKNOX1 chr7 - 33764900 33764912 3.11e-05 0.769 CATCTATCACACT
M6419_1.02 PKNOX1 chr8 + 13319059 13319071 3.14e-05 0.769 CATCAATCAGCAG
M6419_1.02 PKNOX1 chr8 - 17684877 17684889 3.14e-05 0.769 CTTCAGTCAAGGT
M6419_1.02 PKNOX1 chr3 - 50687342 50687354 3.16e-05 0.769 AATCTGTCACTTC
M6419_1.02 PKNOX1 chr5 - 131387023 131387035 3.16e-05 0.769 AAGCAGTCAAGTG
M6419_1.02 PKNOX1 chr5 + 78051028 78051040 3.18e-05 0.769 AAGCAATCAATTC
M6419_1.02 PKNOX1 chr5 + 106959824 106959836 3.24e-05 0.769 CTTCAATCACCTC
M6419_1.02 PKNOX1 chr16 + 9048201 9048213 3.35e-05 0.769 catctgtcaaatg
M6419_1.02 PKNOX1 chr7 - 135260761 135260773 3.35e-05 0.769 CATCTGTCAAATG
M6419_1.02 PKNOX1 chr5 - 124735301 124735313 3.42e-05 0.769 AATCTGTCAGCTC
M6419_1.02 PKNOX1 chr14 + 68011952 68011964 3.5e-05 0.769 TATCAATCACACT
M6419_1.02 PKNOX1 chr1 + 6091218 6091230 3.52e-05 0.769 CAGCTATCAACTC
M6419_1.02 PKNOX1 chr4 + 182724421 182724433 3.55e-05 0.769 CATCCGTCACTTG
M6419_1.02 PKNOX1 chr5 - 126875499 126875511 3.55e-05 0.769 AAGCTGTCAAGCT
M6419_1.02 PKNOX1 chr19 + 37919109 37919121 3.6e-05 0.769 CCTCTGTCAACTC
M6419_1.02 PKNOX1 chr6 - 25179415 25179427 3.62e-05 0.769 AATCTGTCAGCTT
M6419_1.02 PKNOX1 chr7 - 42233494 42233506 3.65e-05 0.769 CAGCAGTCAAACG
M6419_1.02 PKNOX1 chr3 - 102090106 102090118 3.74e-05 0.769 CAGCAGTCAGTTG
M6419_1.02 PKNOX1 chr12 + 65606674 65606686 3.78e-05 0.769 agtcagtcagttc
M6419_1.02 PKNOX1 chr15 - 71454847 71454859 3.8e-05 0.769 ATTCAGTCAATTT
M6419_1.02 PKNOX1 chr7 - 112204127 112204139 3.82e-05 0.769 TATCAGTCAAATG
M6419_1.02 PKNOX1 chr1 + 36450910 36450922 3.84e-05 0.769 aatcagtcagatc
M6419_1.02 PKNOX1 chr6 - 63527787 63527799 3.84e-05 0.769 AATCTGTCAGGTG
M6419_1.02 PKNOX1 chr17 - 41464977 41464989 3.86e-05 0.769 AATCAGTCACCAC
M6419_1.02 PKNOX1 chrX + 1583242 1583254 3.9e-05 0.769 TATCTGTCACTTC
M6419_1.02 PKNOX1 chrX - 23783242 23783254 3.92e-05 0.769 TCTCAGTCAGGCT
M6419_1.02 PKNOX1 chr10 + 68125935 68125947 3.95e-05 0.769 aatcaatcactgc
M6419_1.02 PKNOX1 chr10 + 73413477 73413489 3.95e-05 0.769 CAGCAATCAAATC
M6419_1.02 PKNOX1 chr11 - 134781873 134781885 3.95e-05 0.769 AATCAATCACTGC
M6419_1.02 PKNOX1 chr13 + 21949908 21949920 3.97e-05 0.769 CATCTGTCACTGT
M6419_1.02 PKNOX1 chr8 + 79923959 79923971 3.99e-05 0.769 CATCTGTCAGTGC
M6419_1.02 PKNOX1 chr3 - 128649111 128649123 3.99e-05 0.769 TATCTGTCACCTC
M6419_1.02 PKNOX1 chr14 - 73125652 73125664 4.01e-05 0.769 ATTCAATCAGGCT
M6419_1.02 PKNOX1 chr3 + 69288416 69288428 4.05e-05 0.769 CAGCCATCAATCT
M6419_1.02 PKNOX1 chr14 - 91285270 91285282 4.05e-05 0.769 CCTCTGTCAAGTG
M6419_1.02 PKNOX1 chr5 + 124596922 124596934 4.09e-05 0.769 CATAAATCAACTC
M6419_1.02 PKNOX1 chr1 + 233243576 233243588 4.09e-05 0.769 CATAAATCAACTC
M6419_1.02 PKNOX1 chr3 + 195102706 195102718 4.14e-05 0.769 catctatcaacag
M6419_1.02 PKNOX1 chrX - 16840376 16840388 4.14e-05 0.769 AATAAGTCAAGCT
M6419_1.02 PKNOX1 chr5 - 125550604 125550616 4.14e-05 0.769 TATCTGTCACTTT
M6419_1.02 PKNOX1 chr1 + 167927003 167927015 4.16e-05 0.769 catctgtcacatt
M6419_1.02 PKNOX1 chr10 - 74585779 74585791 4.16e-05 0.769 AAGCAGTCAGGTT
M6419_1.02 PKNOX1 chr5 + 142222269 142222281 4.19e-05 0.769 AAGCAATCACTCT
M6419_1.02 PKNOX1 chr10 - 93992333 93992345 4.19e-05 0.769 CATCCATCACCTG
M6419_1.02 PKNOX1 chr6 - 21414280 21414292 4.28e-05 0.769 CATAAATCAATTT
M6419_1.02 PKNOX1 chr7 + 27113489 27113501 4.28e-05 0.769 TATCAGTCACTGC
M6419_1.02 PKNOX1 chr3 + 72904155 72904167 4.31e-05 0.769 CATCAGTCACAGC
M6419_1.02 PKNOX1 chr6 - 3612730 3612742 4.33e-05 0.769 CAGCTATCACTCC
M6419_1.02 PKNOX1 chr8 - 22392602 22392614 4.33e-05 0.769 CATCCATCAACAC
M6419_1.02 PKNOX1 chr10 - 75593596 75593608 4.35e-05 0.769 AGTCAATCACTTT
M6419_1.02 PKNOX1 chr2 - 231243788 231243800 4.38e-05 0.769 CATAAATCAACTT
M6419_1.02 PKNOX1 chr14 + 96979834 96979846 4.41e-05 0.769 CATAAATCAACCG
M6419_1.02 PKNOX1 chr2 + 174080966 174080978 4.49e-05 0.769 CCTCAATCAATGC
M6419_1.02 PKNOX1 chr16 + 84511687 84511699 4.52e-05 0.769 catctgtcaccat
M6419_1.02 PKNOX1 chr18 + 12337276 12337288 4.54e-05 0.769 TATCTATCACTTC
M6419_1.02 PKNOX1 chr14 + 36808148 36808160 4.54e-05 0.769 CAGCAATCAACAT
M6419_1.02 PKNOX1 chr1 + 56676540 56676552 4.57e-05 0.769 catatgtcaagct
M6419_1.02 PKNOX1 chr6 - 112231733 112231745 4.57e-05 0.769 CATATGTCAAGCT
M6419_1.02 PKNOX1 chr12 - 6493727 6493739 4.62e-05 0.769 ATTCAGTCACCCC
M6419_1.02 PKNOX1 chr19 + 46975959 46975971 4.62e-05 0.769 CATCTATCACTGT
M6419_1.02 PKNOX1 chr1 - 162094523 162094535 4.62e-05 0.769 CATCCATCAACAT
M6419_1.02 PKNOX1 chr2 - 48733372 48733384 4.72e-05 0.769 CATCAATCAAAAG
M6419_1.02 PKNOX1 chr15 + 99249301 99249313 4.74e-05 0.769 ACTCAATCACTCC
M6419_1.02 PKNOX1 chr8 - 2011988 2012000 4.77e-05 0.769 CCTCTGTCACTCT
M6419_1.02 PKNOX1 chr15 - 71574009 71574021 4.77e-05 0.769 CTTCAGTCAATAC
M6419_1.02 PKNOX1 chr19 + 34254280 34254292 4.8e-05 0.769 TTTCAGTCAATTT
M6419_1.02 PKNOX1 chrX - 38061634 38061646 4.8e-05 0.769 CCTCTGTCAGTCC
M6419_1.02 PKNOX1 chr3 + 12559678 12559690 4.89e-05 0.769 TGTCAGTCAGCTC
M6419_1.02 PKNOX1 chr8 - 58067811 58067823 4.89e-05 0.769 CTTCAGTCAACAC
M6419_1.02 PKNOX1 chr9 - 128558566 128558578 4.89e-05 0.769 TATCTATCAGTTC
M6419_1.02 PKNOX1 chr10 - 29926704 29926716 4.92e-05 0.769 TATCAGTCAGTGT
M6419_1.02 PKNOX1 chr5 - 174402129 174402141 4.92e-05 0.769 CCTCTGTCAGCCC
M6419_1.02 PKNOX1 chr6 - 52483323 52483335 4.94e-05 0.769 CCTCCATCAAGTC
M6419_1.02 PKNOX1 chr3 - 66053440 66053452 4.98e-05 0.769 TGTCAGTCAAACT
M6419_1.02 PKNOX1 chr7 + 70708126 70708138 4.98e-05 0.769 TATCTATCACCTT
M6419_1.02 PKNOX1 chr2 - 12304732 12304744 5.04e-05 0.769 TCTCAATCAATTT
M6419_1.02 PKNOX1 chr20 + 11267501 11267513 5.09e-05 0.769 CTTCAGTCAGCTG
M6419_1.02 PKNOX1 chr15 + 72230771 72230783 5.09e-05 0.769 AATCAATCACGAG
M6419_1.02 PKNOX1 chr10 + 511242 511254 5.21e-05 0.769 CCTCAATCAAGGG
M6419_1.02 PKNOX1 chr10 - 7311520 7311532 5.21e-05 0.769 AGTCAATCAAGAT
M6419_1.02 PKNOX1 chr5 - 102865495 102865507 5.21e-05 0.769 CCTCTATCACTCC
M6419_1.02 PKNOX1 chr5 + 125323750 125323762 5.21e-05 0.769 attcagtcacgtt
M6419_1.02 PKNOX1 chr4 - 88145387 88145399 5.23e-05 0.769 AATCTGTCAAATC
M6419_1.02 PKNOX1 chr19 - 1021474 1021486 5.26e-05 0.769 CTTCAATCAAATC
M6419_1.02 PKNOX1 chr19 - 40567189 40567201 5.26e-05 0.769 TCTCAGTCACCCC
M6419_1.02 PKNOX1 chr14 + 79045277 79045289 5.26e-05 0.769 CGGCAATCACTCT
M6419_1.02 PKNOX1 chr10 + 100655800 100655812 5.31e-05 0.769 CGGCAATCACGTC
M6419_1.02 PKNOX1 chr1 + 6037779 6037791 5.36e-05 0.769 ATTCAATCACCCC
M6419_1.02 PKNOX1 chr12 + 23949148 23949160 5.39e-05 0.769 CTTCTGTCACCCT
M6419_1.02 PKNOX1 chr18 + 48943373 48943385 5.39e-05 0.769 CTTCTGTCACCCT
M6419_1.02 PKNOX1 chr11 + 78419419 78419431 5.42e-05 0.769 AATCAATCAGGAG
M6419_1.02 PKNOX1 chr5 - 90983323 90983335 5.45e-05 0.769 CATCAGTCAGAAT
M6419_1.02 PKNOX1 chr22 + 27381999 27382011 5.48e-05 0.769 CAGCAATCAGGGC
M6419_1.02 PKNOX1 chr17 - 27915901 27915913 5.5e-05 0.769 TGTCAATCAGTTC
M6419_1.02 PKNOX1 chr17 - 69713174 69713186 5.56e-05 0.769 CTTCAATCAAATT
M6419_1.02 PKNOX1 chr6 - 150582318 150582330 5.56e-05 0.769 AATCCATCAACTG
M6419_1.02 PKNOX1 chr1 + 162279183 162279195 5.56e-05 0.769 CATAAATCAGCCC
M6419_1.02 PKNOX1 chr4 + 74875103 74875115 5.6e-05 0.769 TATCAATCAGATC
M6419_1.02 PKNOX1 chr6 - 109095551 109095563 5.6e-05 0.769 TCTCAGTCAGCCC
M6419_1.02 PKNOX1 chr2 + 232024502 232024514 5.62e-05 0.769 CTTCTGTCAGTCT
M6419_1.02 PKNOX1 chr10 - 16686034 16686046 5.65e-05 0.769 TTTCAATCAACTT
M6419_1.02 PKNOX1 chr5 - 82620965 82620977 5.65e-05 0.769 CATCAATCATGCC
M6419_1.02 PKNOX1 chr12 + 104944555 104944567 5.68e-05 0.769 CTGCAATCAAGTT
M6419_1.02 PKNOX1 chr12 - 54052262 54052274 5.76e-05 0.769 CATAAATCAGTCT
M6419_1.02 PKNOX1 chr2 - 191247937 191247949 5.79e-05 0.769 CAGCAATCAGGGT
M6419_1.02 PKNOX1 chr10 + 92993905 92993917 5.82e-05 0.769 TGTCAATCAAGGT
M6419_1.02 PKNOX1 chr6 - 56529744 56529756 5.85e-05 0.769 CATCAATCACAAT
M6419_1.02 PKNOX1 chr2 + 63588598 63588610 5.85e-05 0.769 TCTCAGTCACGCG
M6419_1.02 PKNOX1 chr16 + 22647103 22647115 5.88e-05 0.769 TCTCAATCACTCC
M6419_1.02 PKNOX1 chr12 + 58917047 58917059 5.88e-05 0.769 CATAAATCAGCCT
M6419_1.02 PKNOX1 chr2 - 201642948 201642960 5.88e-05 0.769 CTTCCGTCACGCC
M6419_1.02 PKNOX1 chr11 - 86570206 86570218 5.91e-05 0.769 AAGCAGTCAGCTC
M6419_1.02 PKNOX1 chr5 + 59125385 59125397 5.96e-05 0.769 CCTCTGTCAATTG
M6419_1.02 PKNOX1 chr5 + 76710197 76710209 5.96e-05 0.769 TTTCAGTCACTCT
M6419_1.02 PKNOX1 chr5 - 59124356 59124368 5.99e-05 0.769 TATAAATCAAGCT
M6419_1.02 PKNOX1 chr5 + 111454668 111454680 6.02e-05 0.769 aaTCGATCAGGCC
M6419_1.02 PKNOX1 chr6 - 4910505 4910517 6.04e-05 0.769 AATCAGTCACATG
M6419_1.02 PKNOX1 chr14 + 68548229 68548241 6.06e-05 0.769 CATCCATCAGGAC
M6419_1.02 PKNOX1 chr10 + 7302674 7302686 6.11e-05 0.769 CATAAATCAGGTT
M6419_1.02 PKNOX1 chr8 + 106046050 106046062 6.11e-05 0.769 CATAAATCAGGTT
M6419_1.02 PKNOX1 chr3 - 72904271 72904283 6.28e-05 0.769 TGTCAATCAAGAT
M6419_1.02 PKNOX1 chr4 - 38150496 38150508 6.33e-05 0.769 CATCCATCAGGAT
M6419_1.02 PKNOX1 chr17 + 55732615 55732627 6.33e-05 0.769 AAGCTATCAAGTT
M6419_1.02 PKNOX1 chr3 + 69288342 69288354 6.33e-05 0.769 TTTCAATCACTCC
M6419_1.02 PKNOX1 chr11 + 66789660 66789672 6.36e-05 0.769 TTTCAGTCAGCCT
M6419_1.02 PKNOX1 chr11 + 126060996 126061008 6.36e-05 0.769 AATCAATCAAAGC
M6419_1.02 PKNOX1 chr3 - 10193048 10193060 6.38e-05 0.769 CTGCAGTCAGGCT
M6419_1.02 PKNOX1 chr1 - 44326683 44326695 6.38e-05 0.769 CATCTGTCAAAGT
M6419_1.02 PKNOX1 chr6 + 84618992 84619004 6.38e-05 0.769 CTGCAGTCAGGCT
M6419_1.02 PKNOX1 chr5 + 107572340 107572352 6.4e-05 0.769 CAGCAGTCACCGC
M6419_1.02 PKNOX1 chr1 - 27182091 27182103 6.42e-05 0.769 AATAAATCAATCC
M6419_1.02 PKNOX1 chr8 - 37393224 37393236 6.42e-05 0.769 CATCTGTCACATG
M6419_1.02 PKNOX1 chr12 - 105554374 105554386 6.42e-05 0.769 AATAAATCAATCC
M6419_1.02 PKNOX1 chr5 - 143128993 143129005 6.42e-05 0.769 CATCTGTCACATG
M6419_1.02 PKNOX1 chr17 - 67520398 67520410 6.46e-05 0.769 AAGCAATCAAGGC
M6419_1.02 PKNOX1 chr1 + 45803010 45803022 6.52e-05 0.769 AATCCATCACTTT
M6419_1.02 PKNOX1 chr10 - 74418773 74418785 6.52e-05 0.769 CATCTGTCAGTGG
M6419_1.02 PKNOX1 chr1 + 111635427 111635439 6.52e-05 0.769 catctgtcagtgg
M6419_1.02 PKNOX1 chr18 - 49656236 49656248 6.55e-05 0.769 AAGCCATCAAGCC
M6419_1.02 PKNOX1 chr7 + 25882317 25882329 6.61e-05 0.769 CGTCTGTCAACAC
M6419_1.02 PKNOX1 chr5 + 126044084 126044096 6.61e-05 0.769 TTTCAGTCAGGTT
M6419_1.02 PKNOX1 chr6 + 170553958 170553970 6.61e-05 0.769 attctgtcaatct
M6419_1.02 PKNOX1 chr8 + 80110890 80110902 6.64e-05 0.769 tatccatcaactg
M6419_1.02 PKNOX1 chr5 + 68873291 68873303 6.67e-05 0.769 AATCAATCAAAGT
M6419_1.02 PKNOX1 chrX - 120603895 120603907 6.67e-05 0.769 AATCAATCAAAGT
M6419_1.02 PKNOX1 chr10 + 3783880 3783892 6.7e-05 0.769 TTTCAATCACGTC
M6419_1.02 PKNOX1 chr3 + 14452892 14452904 6.7e-05 0.769 CCTCCATCAGGCT
M6419_1.02 PKNOX1 chr4 + 183334010 183334022 6.73e-05 0.769 ACTCAGTCAGCTC
M6419_1.02 PKNOX1 chr5 + 131532468 131532480 6.77e-05 0.769 TATCAGTCAAAGC
M6419_1.02 PKNOX1 chr17 + 29845056 29845068 6.8e-05 0.769 agtcaatcaatac
M6419_1.02 PKNOX1 chr17 + 58417593 58417605 6.8e-05 0.769 CTGCAATCACGCT
M6419_1.02 PKNOX1 chr11 + 117019604 117019616 6.8e-05 0.769 TGGCAGTCAACCC
M6419_1.02 PKNOX1 chr9 + 123678773 123678785 6.8e-05 0.769 TTTCAATCAGCCC
M6419_1.02 PKNOX1 chr5 - 159879257 159879269 6.83e-05 0.769 CGTCAGTCACTGG
M6419_1.02 PKNOX1 chr3 + 193970848 193970860 6.83e-05 0.769 cgtctgtcagctg
M6419_1.02 PKNOX1 chr16 + 54687473 54687485 6.87e-05 0.77 CTGCAGTCAATTT
M6419_1.02 PKNOX1 chrX + 23783204 23783216 7.02e-05 0.783 TATCCGTCACTCG
M6419_1.02 PKNOX1 chr10 + 2950055 2950067 7.12e-05 0.787 CAGCAATCACTGC
M6419_1.02 PKNOX1 chr22 - 42965113 42965125 7.12e-05 0.787 CATCTGTCAGTAG
M6419_1.02 PKNOX1 chr14 + 103395454 103395466 7.21e-05 0.787 ATTCAGTCACTTT
M6419_1.02 PKNOX1 chr5 - 139050795 139050807 7.21e-05 0.787 AATCTGTCAGGGT
M6419_1.02 PKNOX1 chr22 - 42965332 42965344 7.24e-05 0.787 ACTCAGTCAAGAC
M6419_1.02 PKNOX1 chr8 + 80110782 80110794 7.31e-05 0.787 aatcaatcaaaat
M6419_1.02 PKNOX1 chr10 - 101442359 101442371 7.31e-05 0.787 CATCAGTCATGTC
M6419_1.02 PKNOX1 chr6 + 170553968 170553980 7.39e-05 0.787 tctctgtcaatct
M6419_1.02 PKNOX1 chr5 - 124746757 124746769 7.48e-05 0.787 AATCTGTCAGGAC
M6419_1.02 PKNOX1 chr8 + 37329684 37329696 7.55e-05 0.787 CATCCGTCAGCAC
M6419_1.02 PKNOX1 chr13 + 37047231 37047243 7.59e-05 0.787 CATAAATCACTTC
M6419_1.02 PKNOX1 chr15 - 92917635 92917647 7.63e-05 0.787 TCTCAGTCACTTC
M6419_1.02 PKNOX1 chr3 - 159866584 159866596 7.63e-05 0.787 CATAAGTCAGCTT
M6419_1.02 PKNOX1 chr3 + 194350273 194350285 7.63e-05 0.787 aggcagtcaggcc
M6419_1.02 PKNOX1 chr9 - 135330166 135330178 7.67e-05 0.787 CATCTATCACTAG
M6419_1.02 PKNOX1 chr1 - 228861254 228861266 7.67e-05 0.787 ATGCAGTCAAGCT
M6419_1.02 PKNOX1 chr10 - 92994168 92994180 7.74e-05 0.787 TGTCAGTCAATAT
M6419_1.02 PKNOX1 chr4 + 141678468 141678480 7.74e-05 0.787 AGTCAATCAAGAG
M6419_1.02 PKNOX1 chr5 + 175378688 175378700 7.74e-05 0.787 CATAAATCACCTC
M6419_1.02 PKNOX1 chr10 + 62049449 62049461 7.78e-05 0.787 CATCAGTCAGGCA
M6419_1.02 PKNOX1 chr5 + 106959568 106959580 7.82e-05 0.787 cagcaatcactac
M6419_1.02 PKNOX1 chr8 + 37393297 37393309 7.86e-05 0.787 CTTCTGTCAGTTC
M6419_1.02 PKNOX1 chr12 - 62848311 62848323 7.86e-05 0.787 CATATATCAAGTT
M6419_1.02 PKNOX1 chr14 - 103820951 103820963 7.86e-05 0.787 TAGCAATCACTTT
M6419_1.02 PKNOX1 chr6 + 26027095 26027107 7.9e-05 0.787 CATAAATCAAACC
M6419_1.02 PKNOX1 chr4 + 85734661 85734673 7.9e-05 0.787 cagcaatcacatt
M6419_1.02 PKNOX1 chr7 + 27134633 27134645 7.98e-05 0.787 CAGCAATCACCAC
M6419_1.02 PKNOX1 chr17 - 48239455 48239467 8.03e-05 0.787 CATCCATCACATT
M6419_1.02 PKNOX1 chr19 - 30426297 30426309 8.08e-05 0.787 CATAAATCAAGGC
M6419_1.02 PKNOX1 chr9 + 121613592 121613604 8.08e-05 0.787 CATAAATCAAGGC
M6419_1.02 PKNOX1 chr12 + 124720821 124720833 8.08e-05 0.787 CATAAATCACTCG
M6419_1.02 PKNOX1 chr7 + 80773939 80773951 8.14e-05 0.787 CCTCAGTCAGATC
M6419_1.02 PKNOX1 chr9 + 13979733 13979745 8.19e-05 0.787 TGTCTGTCACCCT
M6419_1.02 PKNOX1 chr1 + 41870404 41870416 8.19e-05 0.787 tgtctgtcaccct
M6419_1.02 PKNOX1 chr7 - 51606736 51606748 8.19e-05 0.787 CCTCAGTCACCAC
M6419_1.02 PKNOX1 chr10 - 52092590 52092602 8.19e-05 0.787 TATCAATCAAAGT
M6419_1.02 PKNOX1 chr19 + 1207713 1207725 8.23e-05 0.787 TATCAGTCAGCAG
M6419_1.02 PKNOX1 chr17 - 48571196 48571208 8.23e-05 0.787 CGTAAATCAATCT
M6419_1.02 PKNOX1 chr9 + 125904741 125904753 8.23e-05 0.787 TATCAGTCAGCAG
M6419_1.02 PKNOX1 chr6 - 137665371 137665383 8.23e-05 0.787 TCTCAGTCACCTT
M6419_1.02 PKNOX1 chr8 - 140834834 140834846 8.23e-05 0.787 TATCAGTCAGCAG
M6419_1.02 PKNOX1 chr1 + 202571788 202571800 8.23e-05 0.787 ATTCAGTCAGGTG
M6419_1.02 PKNOX1 chr11 + 118573456 118573468 8.27e-05 0.787 CATCACTCAATCT
M6419_1.02 PKNOX1 chrX + 132480813 132480825 8.27e-05 0.787 cagcaatcactat
M6419_1.02 PKNOX1 chr6 + 133887617 133887629 8.27e-05 0.787 CATCAATCATTCT
M6419_1.02 PKNOX1 chr17 + 9531357 9531369 8.32e-05 0.787 tataaatcaatct
M6419_1.02 PKNOX1 chr5 + 61328138 61328150 8.36e-05 0.787 TGTCCATCAACCT
M6419_1.02 PKNOX1 chr13 - 42595122 42595134 8.4e-05 0.787 CCGCAGTCAGCCT
M6419_1.02 PKNOX1 chr6 + 54802093 54802105 8.4e-05 0.787 TATCAATCAGTGG
M6419_1.02 PKNOX1 chr6 - 119308435 119308447 8.4e-05 0.787 TATAAATCAAGTC
M6419_1.02 PKNOX1 chr1 + 164564009 164564021 8.45e-05 0.787 CATCAATCAGAGG
M6419_1.02 PKNOX1 chr1 - 226122713 226122725 8.45e-05 0.787 CCTCCGTCACGCG
M6419_1.02 PKNOX1 chr13 - 44221992 44222004 8.54e-05 0.791 CATAAATCAGTTT
M6419_1.02 PKNOX1 chr15 + 80094023 80094035 8.54e-05 0.791 CATAAATCAGTTT
M6419_1.02 PKNOX1 chr20 - 38435225 38435237 8.61e-05 0.791 TGTCTGTCAGGTC
M6419_1.02 PKNOX1 chr2 + 201071843 201071855 8.61e-05 0.791 CCTCAGTCAGATT
M6419_1.02 PKNOX1 chr7 - 101884920 101884932 8.69e-05 0.791 CTGCAGTCAGCCC
M6419_1.02 PKNOX1 chr1 + 234544809 234544821 8.72e-05 0.791 CGGCTGTCAGGCT
M6419_1.02 PKNOX1 chr6 + 11120938 11120950 8.8e-05 0.791 CATCACTCAAGTT
M6419_1.02 PKNOX1 chr10 - 33331270 33331282 8.8e-05 0.791 TTTCAGTCACTTT
M6419_1.02 PKNOX1 chr14 + 103395360 103395372 8.8e-05 0.791 CATCATTCAAGTT
M6419_1.02 PKNOX1 chr20 + 51860439 51860451 8.84e-05 0.791 TATAAATCAAGTT
M6419_1.02 PKNOX1 chr1 + 214520717 214520729 8.92e-05 0.791 CCTCCATCACTCT
M6419_1.02 PKNOX1 chr13 - 43769575 43769587 8.96e-05 0.791 CTGCAGTCAGTCT
M6419_1.02 PKNOX1 chr9 + 128558504 128558516 9.02e-05 0.791 AAGCAGTCAGTTG
M6419_1.02 PKNOX1 chr17 + 9531076 9531088 9.05e-05 0.791 cataaatcaggtg
M6419_1.02 PKNOX1 chr6 - 52483150 52483162 9.05e-05 0.791 TATCTGTCAGGAC
M6419_1.02 PKNOX1 chr10 - 75295082 75295094 9.05e-05 0.791 TGTCTGTCAGGCG
M6419_1.02 PKNOX1 chr7 - 148335327 148335339 9.05e-05 0.791 CTGCAATCACTCC
M6419_1.02 PKNOX1 chr19 + 46975890 46975902 9.09e-05 0.791 CTGCAGTCAGCCT
M6419_1.02 PKNOX1 chr16 + 22647170 22647182 9.13e-05 0.791 CATCAATCAGAAG
M6419_1.02 PKNOX1 chr1 + 47727179 47727191 9.13e-05 0.791 TCTCAATCAAGGC
M6419_1.02 PKNOX1 chr3 - 159787929 159787941 9.13e-05 0.791 CCTCAATCACATT
M6419_1.02 PKNOX1 chr19 - 40818609 40818621 9.16e-05 0.791 TGGCAGTCACGCT
M6419_1.02 PKNOX1 chr12 + 65606578 65606590 9.18e-05 0.791 ACTCTGTCAACTT
M6419_1.02 PKNOX1 chr1 - 80403749 80403761 9.18e-05 0.791 CATAAATCAAGAT
M6419_1.02 PKNOX1 chr4 - 94760152 94760164 9.18e-05 0.791 CATAAATCAAGAT
M6419_1.02 PKNOX1 chrX - 18938829 18938841 9.22e-05 0.791 AATCAGTCAAGCA
M6419_1.02 PKNOX1 chr10 - 69861706 69861718 9.22e-05 0.791 TATCAATCAGCAG
M6419_1.02 PKNOX1 chr18 + 10235599 10235611 9.25e-05 0.791 CTTCAGTCAGATT
M6419_1.02 PKNOX1 chr11 + 111794119 111794131 9.32e-05 0.795 TATCTATCAGGGC
M6419_1.02 PKNOX1 chr22 - 42965237 42965249 9.38e-05 0.796 AATCTGTCACTGT
M6419_1.02 PKNOX1 chr7 - 158097878 158097890 9.38e-05 0.796 AAGCTGTCACTCT
M6419_1.02 PKNOX1 chr10 - 100639222 100639234 9.56e-05 0.797 CTTCAATCACCGT
M6419_1.02 PKNOX1 chr21 + 39095488 39095500 9.69e-05 0.797 AATCTGTCACATT
M6419_1.02 PKNOX1 chr11 - 93280003 93280015 9.69e-05 0.797 CTTCAGTCAGCAT
M6419_1.02 PKNOX1 chr15 + 65787939 65787951 9.77e-05 0.797 AATCCATCAATAC
M6419_1.02 PKNOX1 chr12 - 104220221 104220233 9.77e-05 0.797 TGTCAGTCACGAT
M6419_1.02 PKNOX1 chr6 - 119308591 119308603 9.77e-05 0.797 CATCTGTCAAGCA
M6419_1.02 PKNOX1 chr1 - 161872985 161872997 9.77e-05 0.797 CATCTGTCAAGCA
M6419_1.02 PKNOX1 chr6 + 11270218 11270230 9.81e-05 0.797 ATTCTGTCAACTT
M6419_1.02 PKNOX1 chr9 + 23731538 23731550 9.81e-05 0.797 AATCTGTCAGTGT
M6419_1.02 PKNOX1 chr12 + 88520290 88520302 9.81e-05 0.797 AAGCTGTCAGTCT
M6419_1.02 PKNOX1 chr3 - 12664548 12664560 9.86e-05 0.797 TAGCTGTCAAGTG
M6419_1.02 PKNOX1 chr8 - 37548199 37548211 9.86e-05 0.797 TTTCCATCAAGCC
M6419_1.02 PKNOX1 chr1 - 174799587 174799599 9.86e-05 0.797 CTTCAATCAGTGT
M6419_1.02 PKNOX1 chr1 + 25197891 25197903 9.9e-05 0.797 AATCTGTCACGGG
M6419_1.02 PKNOX1 chr6 - 27158308 27158320 9.9e-05 0.797 CGTAAGTCAATTC
M6419_1.02 PKNOX1 chr12 - 31518811 31518823 9.9e-05 0.797 AGTCTGTCAAACT
M6419_1.02 PKNOX1 chr14 + 103395469 103395481 9.9e-05 0.797 TCTCTGTCAGGCT
M6419_1.02 PKNOX1 chr3 + 136802763 136802775 9.9e-05 0.797 CTTAAATCAAGCC
M6419_1.02 PKNOX1 chr1 - 93960939 93960951 9.94e-05 0.797 CAGCTATCAAATC
M6419_1.02 PKNOX1 chr6 - 149852025 149852037 9.94e-05 0.797 AGGCAGTCACCCC
M6419_1.02 PKNOX1 chr10 + 75597916 75597928 9.98e-05 0.798 AAGCTGTCAGCCT

DEBUGGING INFORMATION

Command line:

/software/meme/4.12.0/bin/fimo --parse-genomic-coord --verbosity 1 --oc /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/GFI1B.IDR0.05.filt.narrowPeak.top3000.summitPlusMinus250bp.MemeChipResultsDefaultMax/fimo_out_9 --bgfile /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/GFI1B.IDR0.05.filt.narrowPeak.top3000.summitPlusMinus250bp.MemeChipResultsDefaultMax/background --motif M6419_1.02 /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/MotifData/motif_databases/CIS-BP/Homo_sapiens.meme /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/GFI1B.IDR0.05.filt.narrowPeak.top3000.summitPlusMinus250bp.MemeChipResultsDefaultMax/GFI1B.IDR0.05.filt.narrowPeak.top3000.summitPlusMinus250bp.fa

Settings:

output_directory = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/GFI1B.IDR0.05.filt.narrowPeak.top3000.summitPlusMinus250bp.MemeChipResultsDefaultMax/fimo_out_9 MEME file name = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/MotifData/motif_databases/CIS-BP/Homo_sapiens.meme sequence file name = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/GFI1B.IDR0.05.filt.narrowPeak.top3000.summitPlusMinus250bp.MemeChipResultsDefaultMax/GFI1B.IDR0.05.filt.narrowPeak.top3000.summitPlusMinus250bp.fa
background file name = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/GFI1B.IDR0.05.filt.narrowPeak.top3000.summitPlusMinus250bp.MemeChipResultsDefaultMax/background alphabet = DNA max stored scores = 100000
allow clobber = true compute q-values = true parse genomic coord. = true
text only = false scan both strands = true max strand = false
threshold type = p-value output theshold = 0.0001 pseudocount = 0.1
alpha = 1 verbosity = 1

This information can be useful in the event you wish to report a problem with the FIMO software.


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