******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 4.12.0 (Release date: Tue Jun 27 16:22:50 2017 -0700) For further information on how to interpret these results or to get a copy of the MEME software please access http://meme-suite.org . This file may be used as input to the MAST algorithm for searching sequence databases for matches to groups of motifs. MAST is available for interactive use and downloading at http://meme-suite.org . ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** DATAFILE= /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/FEZF1.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/seqs-centered ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chr18:35583151-35583651 1.0000 100 chr1:198162202-198162702 1.0000 100 chr12:71627445-71627945 1.0000 100 chr14:50599981-50600481 1.0000 100 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chr12:58925125-58925625 1.0000 100 chr3:181328973-181329473 1.0000 100 chr5:93677274-93677774 1.0000 100 chr1:229221380-229221880 1.0000 100 chr7:112150768-112151268 1.0000 100 chr19:3971034-3971534 1.0000 100 chr13:79918543-79919043 1.0000 100 chr12:53321361-53321861 1.0000 100 chr9:123678529-123679029 1.0000 100 chr8:109611202-109611702 1.0000 100 chr8:25998487-25998987 1.0000 100 chr14:96888565-96889065 1.0000 100 chr18:22342533-22343033 1.0000 100 chr5:173315383-173315883 1.0000 100 chr1:86774463-86774963 1.0000 100 chr5:168086173-168086673 1.0000 100 chr2:38096176-38096676 1.0000 100 chr8:37637907-37638407 1.0000 100 chr12:106074924-10607542 1.0000 100 chr5:99900406-99900906 1.0000 100 chr5:36502519-36503019 1.0000 100 chr22:19287243-19287743 1.0000 100 chr1:59214654-59215154 1.0000 100 chr2:38394734-38395234 1.0000 100 chr10:22552858-22553358 1.0000 100 chr17:2484146-2484646 1.0000 100 chr4:110904573-110905073 1.0000 100 chr1:17787729-17788229 1.0000 100 chr6:129183861-129184361 1.0000 100 chr2:191321795-191322295 1.0000 100 chr5:54302207-54302707 1.0000 100 chr1:224317347-224317847 1.0000 100 chr1:26126293-26126793 1.0000 100 chr1:167658715-167659215 1.0000 100 chr10:44752630-44753130 1.0000 100 chr1:81127006-81127506 1.0000 100 chr14:99821669-99822169 1.0000 100 chr13:28336014-28336514 1.0000 100 chr1:87718305-87718805 1.0000 100 chr15:69855589-69856089 1.0000 100 chr10:125633455-12563395 1.0000 100 chr5:88516376-88516876 1.0000 100 chr7:135716607-135717107 1.0000 100 chr5:78908208-78908708 1.0000 100 chr1:80403332-80403832 1.0000 100 chr16:15590837-15591337 1.0000 100 chr6:82260172-82260672 1.0000 100 chr6:1667104-1667604 1.0000 100 chr1:228902961-228903461 1.0000 100 chr5:56112433-56112933 1.0000 100 chr8:37360480-37360980 1.0000 100 chr9:13979392-13979892 1.0000 100 chr7:98476737-98477237 1.0000 100 chr7:116218099-116218599 1.0000 100 chr15:59953465-59953965 1.0000 100 chr8:33513435-33513935 1.0000 100 chr18:31206721-31207221 1.0000 100 chr8:37302602-37303102 1.0000 100 chr17:37488178-37488678 1.0000 100 chr12:121202889-12120338 1.0000 100 chr5:77995845-77996345 1.0000 100 chr17:2484846-2485346 1.0000 100 chr9:125894467-125894967 1.0000 100 chrX:12240507-12241007 1.0000 100 chr10:75358946-75359446 1.0000 100 chr1:8439036-8439536 1.0000 100 chr1:198837492-198837992 1.0000 100 chr10:125708920-12570942 1.0000 100 chr1:234544054-234544554 1.0000 100 chr1:234603820-234604320 1.0000 100 chr5:34854432-34854932 1.0000 100 chr5:119328741-119329241 1.0000 100 chr10:75379172-75379672 1.0000 100 chr10:75294724-75295224 1.0000 100 chr3:17730365-17730865 1.0000 100 chr6:21264232-21264732 1.0000 100 chr18:12520342-12520842 1.0000 100 chr1:11178286-11178786 1.0000 100 chr5:124742105-124742605 1.0000 100 chr10:121310096-12131059 1.0000 100 chr18:59455095-59455595 1.0000 100 chr10:77287672-77288172 1.0000 100 chr7:132485146-132485646 1.0000 100 chr5:59303192-59303692 1.0000 100 chr1:46643342-46643842 1.0000 100 chr14:91284843-91285343 1.0000 100 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/FEZF1.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/seqs-centered -oc /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/FEZF1.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/meme_out -mod zoops -nmotifs 10 -minw 5 -maxw 50 -bfile /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/FEZF1.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/background -dna -revcomp -nostatus model: mod= zoops nmotifs= 10 evt= inf object function= E-value of product of p-values width: minw= 5 maxw= 50 width: wg= 11 ws= 1 endgaps= yes nsites: minsites= 2 maxsites= 600 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 global: substring= yes branching= no wbranch= no em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 data: n= 60000 N= 600 shuffle= -1 strands: + - sample: seed= 0 ctfrac= -1 maxwords= -1 Letter frequencies in dataset: A 0.288 C 0.212 G 0.212 T 0.288 Background letter frequencies (from /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/FEZF1.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/background): A 0.283 C 0.216 G 0.216 T 0.283 ******************************************************************************** ******************************************************************************** MOTIF AAAAGARCA MEME-1 width = 9 sites = 189 llr = 1519 E-value = 3.6e-041 ******************************************************************************** -------------------------------------------------------------------------------- Motif AAAAGARCA MEME-1 Description -------------------------------------------------------------------------------- Simplified A 99a6:73:a pos.-specific C ::::31:a: probability G 1::1726:: matrix T :1:3::1:: bits 2.2 * 2.0 * 1.8 * ** 1.5 * ** Relative 1.3 *** * ** Entropy 1.1 *** * ** (11.6 bits) 0.9 *** * ** 0.7 *** ***** 0.4 ********* 0.2 ********* 0.0 --------- Multilevel AAAAGAGCA consensus TC A sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAAAGARCA MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- --------- chr17:37488178-37488678 - 88 5.29e-06 TACG AAAAGAGCA AATCTCTAAC chr2:160472736-160473236 - 6 5.29e-06 CAGCACTGCT AAAAGAGCA CCATT chr14:103576625-10357712 + 29 5.29e-06 GGAAGCAGGC AAAAGAGCA GGCCTGCTGG chr7:27139689-27140189 - 44 5.29e-06 CCCTCTGCCC AAAAGAGCA GCGCCAGGAG chr1:210236274-210236774 - 14 5.29e-06 CCTTCTGGCT AAAAGAGCA GCTCTTGGCA chr5:119452395-119452895 - 89 5.29e-06 CCG AAAAGAGCA GCCAGCTGCG chr13:67224056-67224556 + 14 5.29e-06 AGCTAATCAC AAAAGAGCA AGCGAATGAA chr6:18405430-18405930 + 92 5.29e-06 CATCTGTGGA AAAAGAGCA chr8:28117457-28117957 - 33 5.29e-06 AGACTGAGAG AAAAGAGCA AAACATTTAA chr1:229218476-229218976 + 48 5.29e-06 tttccaattt aaaagagca tatagcatcc chr2:222176771-222177271 + 28 5.29e-06 TCAGCAGTCA AAAAGAGCA GGCTGTCAGC chr11:110759832-11076033 - 29 5.29e-06 CCAGTTCTCA AAAAGAGCA GTTGATCCTT chr6:116933393-116933893 - 56 5.29e-06 CTGTCTGGCA AAAAGAGCA AGTTAGTCAT chr5:34854432-34854932 - 46 1.75e-05 GCTCAAAGTG AAATGAGCA AAGCAGGGCT chr6:129183861-129184361 - 69 1.75e-05 CTTTCAGGGA AAAAGAACA GAAACTTATC chr12:101052040-10105254 - 78 1.75e-05 TTCTGAACAA AAATGAGCA TTGAGGAATG chr5:126015235-126015735 + 69 1.75e-05 CTGCAAAGCC AAAAGAACA ACAGAAACTT chr11:7690560-7691060 - 30 1.75e-05 GTCACCAATA AAAAGAACA GAAATGAAAA chr6:4109414-4109914 - 84 1.75e-05 GTGGCTTG AAAAGAACA GTTAGTCCTT chr1:24705451-24705951 - 69 1.75e-05 GATGTGTCCA AAATGAGCA AGCAGCAGGA chr3:107208047-107208547 - 72 1.75e-05 CAGTCCAACA AAAAGAACA TTTAAAGTCC chr7:70044111-70044611 - 51 1.75e-05 TTTCCAGGGA AAAAGAACA AACATCCTCT chr4:118327859-118328359 + 76 1.75e-05 CTTAGCCTTT AAATGAGCA AAACAAATTA chr8:98001776-98002276 + 22 1.75e-05 caTCCCCAGA AAAAGAACA ATGCTGTGCA chr6:16849427-16849927 + 67 1.75e-05 TAGTCCAACT AAATGAGCA TTTCACTGTT chr13:50400162-50400662 - 85 1.75e-05 GCTTCTC AAATGAGCA GTGTTGGAGG chr15:70093335-70093835 + 15 1.75e-05 CCAATTGTTA AAAAGAACA ACCGGCCTGC chr20:51934168-51934668 + 53 1.75e-05 ATCACATCGT AAATGAGCA AATGGCATCT chr17:37274366-37274866 + 10 1.75e-05 ACAAACAAA AAAAGAACA TAGCATACTT chr10:75617466-75617966 - 27 1.75e-05 CAGTCCTGAA AAATGAGCA AGAACAAGTT chr5:17314975-17315475 - 47 1.75e-05 CAAGCTTCTC AAATGAGCA TGATTAGAAC chr1:151980342-151980842 + 91 1.75e-05 GCTCCCTACT AAATGAGCA A chr15:57217710-57218210 - 48 1.75e-05 CAGCAGCTGC AAAAGAACA TCGCTGTACA chr1:93554078-93554578 - 74 1.75e-05 CAGTAGCTTG AAAAGAACA GTTAGTCCTT chr16:8676944-8677444 + 58 1.75e-05 GCACACAGCA AAATGAGCA GAAACAATGA chr5:173312780-173313280 - 20 1.75e-05 TCACTCCCCA AAAAGAACA ACAAAAAAAA chr18:33660799-33661299 + 3 1.75e-05 AA AAATGAGCA GTTGTACTGT chr11:126284840-12628534 - 71 1.75e-05 AGGAATATTC AAATGAGCA ATAGACATCA chr16:53849954-53850454 + 46 1.75e-05 TTGAACAGCC AAATGAGCA CCTGTCATGT chr9:77150631-77151131 + 58 1.75e-05 AAATGCATCA AAAAGAACA TCAACTCTGA chr1:100894497-100894997 - 19 1.75e-05 AAAAAAACAA AAATGAGCA AACGAGACGC chr1:198162202-198162702 - 60 1.75e-05 AGTCTGAATA AAATGAGCA ACTCAACCAA chr5:124742105-124742605 + 38 2.68e-05 AGGGGAATGC AAAAGGGCA GTACCTCCCA chr18:31206721-31207221 - 64 2.68e-05 TGGCTCTATT AAAAGGGCA CTGCTTCCTT chr8:33513435-33513935 - 41 2.68e-05 ACAGCCAGAA AAAAGGGCA CCCGAAAACG chr9:13979392-13979892 + 42 2.68e-05 GGGGTAGCAA AAAAGGGCA ATGTACTGTA chr13:28336014-28336514 + 77 2.68e-05 gctgcctcat aaaacagca tgaagctgtt chr9:125883545-125884045 + 41 2.68e-05 TTGGAAAGAT AAAACAGCA TTTATAGTAC chr13:21043973-21044473 + 29 2.68e-05 AGCCCTCTAT AAAACAGCA GGATTCATTT chr15:40092272-40092772 - 53 2.68e-05 AGCATCTATA AAAAGGGCA GCACCGAGCT chr1:81032860-81033360 + 13 2.68e-05 AACTCAGTAG AAAACAGCA CTTTTATTAC chr11:44139544-44140044 - 27 2.68e-05 GCCCATAAAG AAAAGGGCA GGGGCCACGG chr15:55740917-55741417 - 91 2.68e-05 T AAAAGGGCA GATAGAAAAA chr1:31910904-31911404 + 8 2.68e-05 AGCAAAC AAAAGGGCA GAGCAGAACT chr10:16686063-16686563 + 31 2.68e-05 CTCTCAAATA AAAACAGCA AATGCAGGCA chr3:81716848-81717348 + 53 2.68e-05 ATTACCTTGG AAAAGGGCA ATGCTGTAAC chr5:125409123-125409623 + 51 2.68e-05 CAGGAAAAAT AAAACAGCA ATTTAACTGT chr6:168247442-168247942 - 1 3.09e-05 AGCTCGTCAT AAAAGCGCA chr1:230282038-230282538 - 13 3.09e-05 GCACAGCAAT AAAAGCGCA TCTGCAAAAG chr5:77995845-77996345 - 24 3.49e-05 TTTCATAAAT AAAGGAGCA GTTCAGTGCA chr5:59124038-59124538 + 29 3.49e-05 CAAGGAGTAG AAAGGAGCA ATCAAGTGCA chr12:39047548-39048048 + 31 3.49e-05 TATAGTCTTG AAAGGAGCA GTGAATTAAA chr9:20619730-20620230 + 60 3.49e-05 GCTCAGAATC AAAGGAGCA GTCAAGTGGC chr1:223819708-223820208 + 45 3.49e-05 tatcaggata aaaggagca ataaactaat chr12:43193039-43193539 - 15 3.49e-05 TTGCATGGCA AAAGGAGCA GTCAGCAGAG chr22:19287243-19287743 + 38 3.89e-05 ggaagaacag gaaagagCA CGTGGGGATC chr3:48087439-48087939 + 2 3.89e-05 G GAAAGAGCA GAGGCAGTTG chr6:84353737-84354237 - 73 3.89e-05 ATGGCAGAAT GAAAGAGCA GTTCTTTTGT chr12:117494951-11749545 - 70 3.89e-05 AAGGGAGGGG GAAAGAGCA TGGGACAATT chr6:330845-331345 - 2 3.89e-05 TGAGGACAAA GAAAGAGCA G chr5:124651933-124652433 - 81 3.89e-05 GTGGCTTCCA GAAAGAGCA GCAGGAGATG chr5:173315383-173315883 + 43 4.59e-05 GCTGGCGGAC AAATGAACA GCTGACTCAG chr18:70522140-70522640 - 30 4.59e-05 CAGACCAGCC AAATGAACA ATATCACAAT chr6:125918834-125919334 + 19 4.59e-05 AAAAGAAAAA AAATGAACA ATGGGGTTTT chr3:159416811-159417311 + 35 4.59e-05 ATGTGGCTGA AAATGAACA GAGGTTGGGT chr9:109474111-109474611 - 74 4.59e-05 GGCACAGAGT AAATGAACA TCGAGAGAGT chr5:119328741-119329241 - 38 7.27e-05 TGAAAACACT AAATCAGCA TTTAGAAAGC chr18:22342533-22343033 + 16 7.27e-05 CCTTCAAAAC AAAAGGACA CCGAAGATAA chr7:26534961-26535461 + 54 7.27e-05 CCAGCCCATA AAATGGGCA ATAAAACCGA chr6:112231713-112232213 - 73 7.27e-05 CATTTTACAA ATAAGAGCA CTTGGAGTCG chr14:60630082-60630582 - 88 7.27e-05 CCAT AAAACAACA ACTACTTCAA chr3:125052661-125053161 + 70 7.27e-05 CACAGGGAAG AAAAGGACA TCTGTGGCCC chr20:25252771-25253271 - 70 7.27e-05 TTCCTAAGTG ATAAGAGCA ATAAAAATGA chr1:113991392-113991892 - 82 7.27e-05 CCATGAATCA ATAAGAGCA TTTCTCTGCC chr8:108042873-108043373 + 75 7.27e-05 AGAGTGGAAG ATAAGAGCA ATTATGGAAC chr10:125707796-12570829 - 26 7.27e-05 TGGAGAGAAC AAAAGGACA GCACTGCTTA chr5:14156532-14157032 + 10 7.27e-05 AAACTGTTC AAATCAGCA GTTAGTGGTC chr7:55108727-55109227 + 50 7.27e-05 gtaaacatat aaatcagca ggatacattg chr1:228867046-228867546 + 3 7.27e-05 TG ATAAGAGCA GGCCACAGCC chr21:37547173-37547673 - 60 7.27e-05 AGTCCCTCCG AAAACAACA AACGGAATAT chr5:90296944-90297444 - 7 7.27e-05 GCACAGTGTG ATAAGAGCA ACAACT chr2:48279284-48279784 - 68 7.27e-05 AATTGCCAAT AAATCAGCA TGACCTCTAC chr4:24646064-24646564 - 6 7.27e-05 AAATGAATGC AAAAGGACA TCTAT chr10:29657848-29658348 + 25 7.27e-05 CTCTCTCTGA AAAAGGACA AAGTCTCTAC chr16:12120449-12120949 - 70 7.27e-05 CTCAATTTCA AAAACAACA GTGGAGCAGG chr6:165674339-165674839 - 70 9.30e-05 GAGTTAGGCG AAAAGATCA TTAGCGAGCC chr15:100307400-10030790 - 59 9.30e-05 TCATCACAGT AAAACGGCA TGGTTCCCAT chr7:27165504-27166004 + 63 9.30e-05 AACGACGATT AAAAGATCA AATCTAGCCT chr5:96935710-96936210 - 46 9.30e-05 AGCAAGAGGG AAAAGCACA GTCAAACCCC chr10:22912181-22912681 - 2 9.30e-05 CACTCTATAA AAAAGATCA T chr4:119730150-119730650 + 51 9.30e-05 CCAGTTATTT AAAAGCACA ACATCATAAA chr6:15504743-15505243 - 20 9.30e-05 GAAGAGAAGA AAAAGCACA ACTGTGGTTT chr11:92838914-92839414 + 55 9.30e-05 GACTGTTTTC AAATGCGCA ACAGGAGGTC chr2:189836632-189837132 - 37 9.30e-05 CACAACCGTA AAAAGATCA CTTCAGGAAA chr11:116853574-11685407 + 38 9.30e-05 TGCAAAGTCA AAAAGATCA AGTGTGTGTA chr18:50631730-50632230 + 24 9.30e-05 agatgtttgt aaaagcaca aagtgaactt chr9:125904301-125904801 - 87 9.30e-05 GCAAT AAAACGGCA ACCTCACTGA chr9:125887119-125887619 + 62 9.30e-05 ATGGCTAAAG AAAAGCACA CGCTATGCTA chrX:136039451-136039951 - 69 9.83e-05 ACTAAAACCA AAAGGAACA TCACTGTAAA chr2:216750784-216751284 + 67 9.83e-05 ttacatggca aaaggaaca gtcagcagag chr3:50671240-50671740 + 3 1.12e-04 GA GAATGAGCA TCGTGTGCCA chr8:37452485-37452985 - 64 1.12e-04 TGGTTATCTC AAAACCGCA AGTGAATGAG chr6:69861971-69862471 - 32 1.12e-04 TGTAACCGCA GAATGAGCA TGTCTCAGCG chr10:11773673-11774173 - 57 1.12e-04 ATAATGGTCA GAAAGAACA TCACCAGGCC chr6:112232860-112233360 + 57 1.12e-04 GGAGCTCCTG GAATGAGCA GCCAGGGACA chr6:21953882-21954382 - 34 1.12e-04 GTGGTAATTT AAAACCGCA CCTCCTGGAG chr4:182556012-182556512 - 62 1.12e-04 AAGCAACCAA GAATGAGCA GTGCCTGTGT chr10:75358946-75359446 - 63 1.19e-04 GGGGCACCAC AAAGGGGCA GAGGGAGTGA chr11:46948368-46948868 - 75 1.19e-04 ACTCTTAGAC AAAGCAGCA GGGCCAATAA chr17:70969487-70969987 - 40 1.19e-04 AAAAACCCTG AAAGCAGCA AGCAACCCAT chr19:45406136-45406636 - 25 1.19e-04 ACGCCTCCTT AAAGGGGCA GCCACACTGC chr3:182365018-182365518 - 66 1.19e-04 CAGCTTTGTG AAAGCAGCA CATGCAGTGG chr10:77287672-77288172 + 59 1.26e-04 CAATTTGATG GAAAGGGCA AACACCAGAG chr1:234603820-234604320 - 56 1.26e-04 AGGGACTGCG GAAAGGGCA ACTGGATAGG chr14:96888565-96889065 - 8 1.26e-04 GCACAGATTA GAAACAGCA GGAGAGC chr8:99323779-99324279 + 57 1.57e-04 AAGCATCCAG ATATGAGCA ATCCTATAGT chr8:120266326-120266826 + 16 1.57e-04 TTCCTGCCTT AAATCAACA TTAGAACCAC chr14:68140343-68140843 - 12 1.57e-04 GGGTAAAATT ATAAGAACA TTTTTATGAG chr12:114656063-11465656 + 48 1.57e-04 CAATAAATAA ATAAGAACA GAGACAAGAA chr12:64665902-64666402 - 30 1.57e-04 TGTAAAACAC ATATGAGCA ATAGGCAATA chr1:88145571-88146071 - 56 1.57e-04 TCAGGACCTA AAATCAACA GAAGTAAGTC chr5:160119295-160119795 - 13 1.57e-04 GAGGTGCCAG AAACGAGCA TCAGGGAAAG chr6:111888888-111889388 + 85 1.57e-04 AGAAGCAAGC AAAGGCGCA GATTTGC chr10:44752630-44753130 + 27 1.94e-04 CATTTCATCC ATAACAGCA GGGTATGTTT chr6:2028542-2029042 + 24 1.94e-04 TAACATAAAC AAAACGACA AGTAATGTGT chr1:67719801-67720301 - 30 1.94e-04 ATACTTGTAG GAAGGAGCA GCAAGGTGTA chr1:52955618-52956118 + 4 1.94e-04 gaa gaaggagca gtaaaaacta chr3:157913589-157914089 - 57 1.94e-04 AGGCTGGCTC ATAAGGGCA TGTTATAAAG chr6:150753371-150753871 + 66 1.94e-04 TTCCAAATGC AAATGCACA GAGAGAAAAG chr15:65832750-65833250 - 27 1.94e-04 GAAACCACTT GAAGGAGCA GCTGGGTGAA chr6:123841223-123841723 - 66 1.94e-04 CCCTGCAGTG ATAAGGGCA GTGGTCTGCT chr1:67393214-67393714 + 30 1.94e-04 TCACCTTGTG AAAACGACA AGCCATTTCC chr3:158168014-158168514 - 34 1.94e-04 GGTAGAAGCT AAATGATCA AGGGCAATAA chr14:24179957-24180457 - 31 1.94e-04 AGAAGGCTGG AAATGCACA TTCAGAAATG chr21:35256454-35256954 - 81 1.94e-04 GCTGAGGTTG ATAACAGCA GAGTGCCTCT chr12:65593199-65593699 - 63 1.94e-04 TCCTTTATTC AAATGCACA GCAATAAAAG chr7:132485146-132485646 - 28 2.25e-04 ATTGTGAACC AAAACATCA TAAACTTCCA chr15:69855589-69856089 + 18 2.25e-04 CCAGGGGAGA AAAACCACA AGGCAGGAAA chr2:38394734-38395234 + 47 2.25e-04 aatgcaaatc aaaaccaca atgagatacc chr15:81950810-81951310 - 88 2.25e-04 GAGA GAATGAACA TCAACAGTGG chr6:82877087-82877587 - 56 2.25e-04 GCAGTCCAAT AAAACCACA GGTTGTAAAT chr9:18976648-18977148 + 66 2.25e-04 ACGACCCCAC AAAACCACA AACCAAaaca chr6:152572623-152573123 - 4 2.25e-04 AATGACCCAG AAAACATCA ACA chr5:82406264-82406764 - 83 2.25e-04 TTGTTCACC AAAAGGTCA CTTTCTGAAT chr2:11830150-11830650 - 92 2.25e-04 . AAAACCACA ATCTCCGGTG chr7:85049426-85049926 + 35 2.25e-04 AGTAAGCACA AAAACCACA GCTCAACAGA chr10:75593140-75593640 + 8 2.38e-04 GCTGAGG AAAGCAACA TTATCTCCAG chr2:205866025-205866525 - 70 2.38e-04 TGGTGGCATA AAAGGGACA GTTCTATTGG chr12:121202889-12120338 - 30 2.64e-04 AAGAACTCCG AAAAGCTCA TCAGTCTGGG chr5:99900406-99900906 - 27 2.64e-04 GGATATCTGA GAATGGGCA AAAGGTGAAA chr5:16889600-16890100 - 61 2.64e-04 TCAAGAGGAG GAAAGGACA ATAAACTGGG chr2:53987364-53987864 + 45 2.64e-04 catcagcatt gtaagagca atccggtttc chr8:27603175-27603675 + 55 2.64e-04 TAAGCATTAA GTAAGAGCA AAGCCACCAG chr17:76716680-76717180 + 77 2.64e-04 GTATGGCTGT GAAAGGACA TCGAGGGTTG chr17:9565980-9566480 + 21 2.64e-04 aaacaggaaa aaaagctca acatcactga chr5:122332965-122333465 - 27 2.64e-04 CAGCAATTTG AAAAGCTCA GCTTCACCTT chr4:128393244-128393744 + 42 2.89e-04 AACTGTTGGG AAAGGATCA TTTATCATGA chr6:39059651-39060151 - 51 3.45e-04 GTTTGCTCAT AAACGGGCA CCACCAGGAC chr10:28202987-28203487 - 41 3.45e-04 CAGACCAAAA ATAACAACA GTCCCATGTG chr7:121313645-121314145 - 24 3.45e-04 CACACTTGTG AAACCAGCA CCAGACAAAC chr19:34184800-34185300 + 84 3.45e-04 TTTTGGTTTT ATAAGGACA AGATGGGC chr18:35583151-35583651 - 26 3.45e-04 GGCACCAAAC AAACCAGCA GAGCAGTCAT chr6:82260172-82260672 + 69 3.95e-04 CTGCAAATTA AAATCCACA GGGAGCAGAC chr13:37046880-37047380 + 81 3.95e-04 TTTCCAGTTT AAATCATCA TGAGAAAACA chr4:179750397-179750897 - 86 3.95e-04 CGTCGT AAATCATCA TACAACACCC chr9:131633655-131634155 - 11 3.95e-04 GCCAAATTAT AAATGGTCA ACTTTCAATG chr10:112956514-11295701 + 35 3.95e-04 ACCAGGTCAT AAATCCACA GGCTTTATTT chr2:109213979-109214479 + 69 3.95e-04 ACCACAAGAG ATAAGATCA CCCAAAGGGA chr15:36948886-36949386 + 68 3.95e-04 TTAAAGTCAG ATAACGGCA GTTCCTGTGG chr6:1597039-1597539 + 91 3.95e-04 GTGACAAGGG AAATCCACA C chr1:80403332-80403832 + 53 4.00e-04 CTAAAGCTCA ATAGGAACA AGATTGCCTT chr9:125894467-125894967 + 63 4.38e-04 TAGTCAGAAT GTATGAGCA GTCATAATGC chr12:54359104-54359604 + 81 4.38e-04 GAGAGCGTGC GAACGAGCA AGAACAGCCC chr12:54052043-54052543 - 31 4.38e-04 ATAGGGCTGT AAAACGTCA TAAATCAGTC chr3:42819859-42820359 + 89 4.38e-04 CCAAATCACA GTAAGAACA GGA chr5:59021170-59021670 - 61 4.38e-04 ATTGGAGCTT GAATCAACA GGGCTGGGAG chr10:101485924-10148642 + 87 4.50e-04 TAATCCAATT ATAGCAGCA TAAGC chr4:139557104-139557604 - 52 5.88e-04 AGGCAGCGCC ATAACGACA CTAAGTGGCC chr14:76486237-76486737 + 70 5.88e-04 AGGTCGACAG AAACGATCA TAAATTAACA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAAAGARCA MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr17:37488178-37488678 5.3e-06 87_[-1]_4 chr2:160472736-160473236 5.3e-06 5_[-1]_86 chr14:103576625-10357712 5.3e-06 28_[+1]_63 chr7:27139689-27140189 5.3e-06 43_[-1]_48 chr1:210236274-210236774 5.3e-06 13_[-1]_78 chr5:119452395-119452895 5.3e-06 88_[-1]_3 chr13:67224056-67224556 5.3e-06 13_[+1]_78 chr6:18405430-18405930 5.3e-06 91_[+1] chr8:28117457-28117957 5.3e-06 32_[-1]_59 chr1:229218476-229218976 5.3e-06 47_[+1]_44 chr2:222176771-222177271 5.3e-06 27_[+1]_64 chr11:110759832-11076033 5.3e-06 28_[-1]_63 chr6:116933393-116933893 5.3e-06 55_[-1]_36 chr5:34854432-34854932 1.8e-05 45_[-1]_46 chr6:129183861-129184361 1.8e-05 68_[-1]_23 chr12:101052040-10105254 1.8e-05 77_[-1]_14 chr5:126015235-126015735 1.8e-05 68_[+1]_23 chr11:7690560-7691060 1.8e-05 29_[-1]_62 chr6:4109414-4109914 1.8e-05 83_[-1]_8 chr1:24705451-24705951 1.8e-05 68_[-1]_23 chr3:107208047-107208547 1.8e-05 71_[-1]_20 chr7:70044111-70044611 1.8e-05 50_[-1]_41 chr4:118327859-118328359 1.8e-05 75_[+1]_16 chr8:98001776-98002276 1.8e-05 21_[+1]_70 chr6:16849427-16849927 1.8e-05 66_[+1]_25 chr13:50400162-50400662 1.8e-05 84_[-1]_7 chr15:70093335-70093835 1.8e-05 14_[+1]_77 chr20:51934168-51934668 1.8e-05 52_[+1]_39 chr17:37274366-37274866 1.8e-05 9_[+1]_82 chr10:75617466-75617966 1.8e-05 26_[-1]_65 chr5:17314975-17315475 1.8e-05 46_[-1]_45 chr1:151980342-151980842 1.8e-05 90_[+1]_1 chr15:57217710-57218210 1.8e-05 47_[-1]_44 chr1:93554078-93554578 1.8e-05 73_[-1]_18 chr16:8676944-8677444 1.8e-05 57_[+1]_34 chr5:173312780-173313280 1.8e-05 19_[-1]_72 chr18:33660799-33661299 1.8e-05 2_[+1]_89 chr11:126284840-12628534 1.8e-05 70_[-1]_21 chr16:53849954-53850454 1.8e-05 45_[+1]_46 chr9:77150631-77151131 1.8e-05 57_[+1]_34 chr1:100894497-100894997 1.8e-05 18_[-1]_73 chr1:198162202-198162702 1.8e-05 59_[-1]_32 chr5:124742105-124742605 2.7e-05 37_[+1]_54 chr18:31206721-31207221 2.7e-05 63_[-1]_28 chr8:33513435-33513935 2.7e-05 40_[-1]_51 chr9:13979392-13979892 2.7e-05 41_[+1]_50 chr13:28336014-28336514 2.7e-05 76_[+1]_15 chr9:125883545-125884045 2.7e-05 40_[+1]_51 chr13:21043973-21044473 2.7e-05 28_[+1]_63 chr15:40092272-40092772 2.7e-05 52_[-1]_39 chr1:81032860-81033360 2.7e-05 12_[+1]_79 chr11:44139544-44140044 2.7e-05 26_[-1]_65 chr15:55740917-55741417 2.7e-05 90_[-1]_1 chr1:31910904-31911404 2.7e-05 7_[+1]_84 chr10:16686063-16686563 2.7e-05 30_[+1]_61 chr3:81716848-81717348 2.7e-05 52_[+1]_39 chr5:125409123-125409623 2.7e-05 50_[+1]_41 chr6:168247442-168247942 3.1e-05 [-1]_91 chr1:230282038-230282538 3.1e-05 12_[-1]_79 chr5:77995845-77996345 3.5e-05 23_[-1]_68 chr5:59124038-59124538 3.5e-05 28_[+1]_63 chr12:39047548-39048048 3.5e-05 30_[+1]_61 chr9:20619730-20620230 3.5e-05 59_[+1]_32 chr1:223819708-223820208 3.5e-05 44_[+1]_47 chr12:43193039-43193539 3.5e-05 14_[-1]_77 chr22:19287243-19287743 3.9e-05 37_[+1]_54 chr3:48087439-48087939 3.9e-05 1_[+1]_90 chr6:84353737-84354237 3.9e-05 72_[-1]_19 chr12:117494951-11749545 3.9e-05 69_[-1]_22 chr6:330845-331345 3.9e-05 1_[-1]_90 chr5:124651933-124652433 3.9e-05 80_[-1]_11 chr5:173315383-173315883 4.6e-05 42_[+1]_49 chr18:70522140-70522640 4.6e-05 29_[-1]_62 chr6:125918834-125919334 4.6e-05 18_[+1]_73 chr3:159416811-159417311 4.6e-05 34_[+1]_57 chr9:109474111-109474611 4.6e-05 73_[-1]_18 chr5:119328741-119329241 7.3e-05 37_[-1]_54 chr18:22342533-22343033 7.3e-05 15_[+1]_76 chr7:26534961-26535461 7.3e-05 53_[+1]_38 chr6:112231713-112232213 7.3e-05 72_[-1]_19 chr14:60630082-60630582 7.3e-05 87_[-1]_4 chr3:125052661-125053161 7.3e-05 69_[+1]_22 chr20:25252771-25253271 7.3e-05 69_[-1]_22 chr1:113991392-113991892 7.3e-05 81_[-1]_10 chr8:108042873-108043373 7.3e-05 74_[+1]_17 chr10:125707796-12570829 7.3e-05 25_[-1]_66 chr5:14156532-14157032 7.3e-05 9_[+1]_82 chr7:55108727-55109227 7.3e-05 49_[+1]_42 chr1:228867046-228867546 7.3e-05 2_[+1]_89 chr21:37547173-37547673 7.3e-05 59_[-1]_32 chr5:90296944-90297444 7.3e-05 6_[-1]_85 chr2:48279284-48279784 7.3e-05 67_[-1]_24 chr4:24646064-24646564 7.3e-05 5_[-1]_86 chr10:29657848-29658348 7.3e-05 24_[+1]_67 chr16:12120449-12120949 7.3e-05 69_[-1]_22 chr6:165674339-165674839 9.3e-05 69_[-1]_22 chr15:100307400-10030790 9.3e-05 58_[-1]_33 chr7:27165504-27166004 9.3e-05 62_[+1]_29 chr5:96935710-96936210 9.3e-05 45_[-1]_46 chr10:22912181-22912681 9.3e-05 1_[-1]_90 chr4:119730150-119730650 9.3e-05 50_[+1]_41 chr6:15504743-15505243 9.3e-05 19_[-1]_72 chr11:92838914-92839414 9.3e-05 54_[+1]_37 chr2:189836632-189837132 9.3e-05 36_[-1]_55 chr11:116853574-11685407 9.3e-05 37_[+1]_54 chr18:50631730-50632230 9.3e-05 23_[+1]_68 chr9:125904301-125904801 9.3e-05 86_[-1]_5 chr9:125887119-125887619 9.3e-05 61_[+1]_30 chrX:136039451-136039951 9.8e-05 68_[-1]_23 chr2:216750784-216751284 9.8e-05 66_[+1]_25 chr3:50671240-50671740 0.00011 2_[+1]_89 chr8:37452485-37452985 0.00011 63_[-1]_28 chr6:69861971-69862471 0.00011 31_[-1]_60 chr10:11773673-11774173 0.00011 56_[-1]_35 chr6:112232860-112233360 0.00011 56_[+1]_35 chr6:21953882-21954382 0.00011 33_[-1]_58 chr4:182556012-182556512 0.00011 61_[-1]_30 chr10:75358946-75359446 0.00012 62_[-1]_29 chr11:46948368-46948868 0.00012 74_[-1]_17 chr17:70969487-70969987 0.00012 39_[-1]_52 chr19:45406136-45406636 0.00012 24_[-1]_67 chr3:182365018-182365518 0.00012 65_[-1]_26 chr10:77287672-77288172 0.00013 58_[+1]_33 chr1:234603820-234604320 0.00013 55_[-1]_36 chr14:96888565-96889065 0.00013 7_[-1]_84 chr8:99323779-99324279 0.00016 56_[+1]_35 chr8:120266326-120266826 0.00016 15_[+1]_76 chr14:68140343-68140843 0.00016 11_[-1]_80 chr12:114656063-11465656 0.00016 47_[+1]_44 chr12:64665902-64666402 0.00016 29_[-1]_62 chr1:88145571-88146071 0.00016 55_[-1]_36 chr5:160119295-160119795 0.00016 12_[-1]_79 chr6:111888888-111889388 0.00016 84_[+1]_7 chr10:44752630-44753130 0.00019 26_[+1]_65 chr6:2028542-2029042 0.00019 23_[+1]_68 chr1:67719801-67720301 0.00019 29_[-1]_62 chr1:52955618-52956118 0.00019 3_[+1]_88 chr3:157913589-157914089 0.00019 56_[-1]_35 chr6:150753371-150753871 0.00019 65_[+1]_26 chr15:65832750-65833250 0.00019 26_[-1]_65 chr6:123841223-123841723 0.00019 65_[-1]_26 chr1:67393214-67393714 0.00019 29_[+1]_62 chr3:158168014-158168514 0.00019 33_[-1]_58 chr14:24179957-24180457 0.00019 30_[-1]_61 chr21:35256454-35256954 0.00019 80_[-1]_11 chr12:65593199-65593699 0.00019 62_[-1]_29 chr7:132485146-132485646 0.00023 27_[-1]_64 chr15:69855589-69856089 0.00023 17_[+1]_74 chr2:38394734-38395234 0.00023 46_[+1]_45 chr15:81950810-81951310 0.00023 87_[-1]_4 chr6:82877087-82877587 0.00023 55_[-1]_36 chr9:18976648-18977148 0.00023 65_[+1]_26 chr6:152572623-152573123 0.00023 3_[-1]_88 chr5:82406264-82406764 0.00023 82_[-1]_9 chr2:11830150-11830650 0.00023 91_[-1] chr7:85049426-85049926 0.00023 34_[+1]_57 chr10:75593140-75593640 0.00024 7_[+1]_84 chr2:205866025-205866525 0.00024 69_[-1]_22 chr12:121202889-12120338 0.00026 29_[-1]_62 chr5:99900406-99900906 0.00026 26_[-1]_65 chr5:16889600-16890100 0.00026 60_[-1]_31 chr2:53987364-53987864 0.00026 44_[+1]_47 chr8:27603175-27603675 0.00026 54_[+1]_37 chr17:76716680-76717180 0.00026 76_[+1]_15 chr17:9565980-9566480 0.00026 20_[+1]_71 chr5:122332965-122333465 0.00026 26_[-1]_65 chr4:128393244-128393744 0.00029 41_[+1]_50 chr6:39059651-39060151 0.00035 50_[-1]_41 chr10:28202987-28203487 0.00035 40_[-1]_51 chr7:121313645-121314145 0.00035 23_[-1]_68 chr19:34184800-34185300 0.00035 83_[+1]_8 chr18:35583151-35583651 0.00035 25_[-1]_66 chr6:82260172-82260672 0.00039 68_[+1]_23 chr13:37046880-37047380 0.00039 80_[+1]_11 chr4:179750397-179750897 0.00039 85_[-1]_6 chr9:131633655-131634155 0.00039 10_[-1]_81 chr10:112956514-11295701 0.00039 34_[+1]_57 chr2:109213979-109214479 0.00039 68_[+1]_23 chr15:36948886-36949386 0.00039 67_[+1]_24 chr6:1597039-1597539 0.00039 90_[+1]_1 chr1:80403332-80403832 0.0004 52_[+1]_39 chr9:125894467-125894967 0.00044 62_[+1]_29 chr12:54359104-54359604 0.00044 80_[+1]_11 chr12:54052043-54052543 0.00044 30_[-1]_61 chr3:42819859-42820359 0.00044 88_[+1]_3 chr5:59021170-59021670 0.00044 60_[-1]_31 chr10:101485924-10148642 0.00045 86_[+1]_5 chr4:139557104-139557604 0.00059 51_[-1]_40 chr14:76486237-76486737 0.00059 69_[+1]_22 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAAAGARCA MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF AAAAGARCA width=9 seqs=189 chr17:37488178-37488678 ( 88) AAAAGAGCA 1 chr2:160472736-160473236 ( 6) AAAAGAGCA 1 chr14:103576625-10357712 ( 29) AAAAGAGCA 1 chr7:27139689-27140189 ( 44) AAAAGAGCA 1 chr1:210236274-210236774 ( 14) AAAAGAGCA 1 chr5:119452395-119452895 ( 89) AAAAGAGCA 1 chr13:67224056-67224556 ( 14) AAAAGAGCA 1 chr6:18405430-18405930 ( 92) AAAAGAGCA 1 chr8:28117457-28117957 ( 33) AAAAGAGCA 1 chr1:229218476-229218976 ( 48) AAAAGAGCA 1 chr2:222176771-222177271 ( 28) AAAAGAGCA 1 chr11:110759832-11076033 ( 29) AAAAGAGCA 1 chr6:116933393-116933893 ( 56) AAAAGAGCA 1 chr5:34854432-34854932 ( 46) AAATGAGCA 1 chr6:129183861-129184361 ( 69) AAAAGAACA 1 chr12:101052040-10105254 ( 78) AAATGAGCA 1 chr5:126015235-126015735 ( 69) AAAAGAACA 1 chr11:7690560-7691060 ( 30) AAAAGAACA 1 chr6:4109414-4109914 ( 84) AAAAGAACA 1 chr1:24705451-24705951 ( 69) AAATGAGCA 1 chr3:107208047-107208547 ( 72) AAAAGAACA 1 chr7:70044111-70044611 ( 51) AAAAGAACA 1 chr4:118327859-118328359 ( 76) AAATGAGCA 1 chr8:98001776-98002276 ( 22) AAAAGAACA 1 chr6:16849427-16849927 ( 67) AAATGAGCA 1 chr13:50400162-50400662 ( 85) AAATGAGCA 1 chr15:70093335-70093835 ( 15) AAAAGAACA 1 chr20:51934168-51934668 ( 53) AAATGAGCA 1 chr17:37274366-37274866 ( 10) AAAAGAACA 1 chr10:75617466-75617966 ( 27) AAATGAGCA 1 chr5:17314975-17315475 ( 47) AAATGAGCA 1 chr1:151980342-151980842 ( 91) AAATGAGCA 1 chr15:57217710-57218210 ( 48) AAAAGAACA 1 chr1:93554078-93554578 ( 74) AAAAGAACA 1 chr16:8676944-8677444 ( 58) AAATGAGCA 1 chr5:173312780-173313280 ( 20) AAAAGAACA 1 chr18:33660799-33661299 ( 3) AAATGAGCA 1 chr11:126284840-12628534 ( 71) AAATGAGCA 1 chr16:53849954-53850454 ( 46) AAATGAGCA 1 chr9:77150631-77151131 ( 58) AAAAGAACA 1 chr1:100894497-100894997 ( 19) AAATGAGCA 1 chr1:198162202-198162702 ( 60) AAATGAGCA 1 chr5:124742105-124742605 ( 38) AAAAGGGCA 1 chr18:31206721-31207221 ( 64) AAAAGGGCA 1 chr8:33513435-33513935 ( 41) AAAAGGGCA 1 chr9:13979392-13979892 ( 42) AAAAGGGCA 1 chr13:28336014-28336514 ( 77) AAAACAGCA 1 chr9:125883545-125884045 ( 41) AAAACAGCA 1 chr13:21043973-21044473 ( 29) AAAACAGCA 1 chr15:40092272-40092772 ( 53) AAAAGGGCA 1 chr1:81032860-81033360 ( 13) AAAACAGCA 1 chr11:44139544-44140044 ( 27) AAAAGGGCA 1 chr15:55740917-55741417 ( 91) AAAAGGGCA 1 chr1:31910904-31911404 ( 8) AAAAGGGCA 1 chr10:16686063-16686563 ( 31) AAAACAGCA 1 chr3:81716848-81717348 ( 53) AAAAGGGCA 1 chr5:125409123-125409623 ( 51) AAAACAGCA 1 chr6:168247442-168247942 ( 1) AAAAGCGCA 1 chr1:230282038-230282538 ( 13) AAAAGCGCA 1 chr5:77995845-77996345 ( 24) AAAGGAGCA 1 chr5:59124038-59124538 ( 29) AAAGGAGCA 1 chr12:39047548-39048048 ( 31) AAAGGAGCA 1 chr9:20619730-20620230 ( 60) AAAGGAGCA 1 chr1:223819708-223820208 ( 45) AAAGGAGCA 1 chr12:43193039-43193539 ( 15) AAAGGAGCA 1 chr22:19287243-19287743 ( 38) GAAAGAGCA 1 chr3:48087439-48087939 ( 2) GAAAGAGCA 1 chr6:84353737-84354237 ( 73) GAAAGAGCA 1 chr12:117494951-11749545 ( 70) GAAAGAGCA 1 chr6:330845-331345 ( 2) GAAAGAGCA 1 chr5:124651933-124652433 ( 81) GAAAGAGCA 1 chr5:173315383-173315883 ( 43) AAATGAACA 1 chr18:70522140-70522640 ( 30) AAATGAACA 1 chr6:125918834-125919334 ( 19) AAATGAACA 1 chr3:159416811-159417311 ( 35) AAATGAACA 1 chr9:109474111-109474611 ( 74) AAATGAACA 1 chr5:119328741-119329241 ( 38) AAATCAGCA 1 chr18:22342533-22343033 ( 16) AAAAGGACA 1 chr7:26534961-26535461 ( 54) AAATGGGCA 1 chr6:112231713-112232213 ( 73) ATAAGAGCA 1 chr14:60630082-60630582 ( 88) AAAACAACA 1 chr3:125052661-125053161 ( 70) AAAAGGACA 1 chr20:25252771-25253271 ( 70) ATAAGAGCA 1 chr1:113991392-113991892 ( 82) ATAAGAGCA 1 chr8:108042873-108043373 ( 75) ATAAGAGCA 1 chr10:125707796-12570829 ( 26) AAAAGGACA 1 chr5:14156532-14157032 ( 10) AAATCAGCA 1 chr7:55108727-55109227 ( 50) AAATCAGCA 1 chr1:228867046-228867546 ( 3) ATAAGAGCA 1 chr21:37547173-37547673 ( 60) AAAACAACA 1 chr5:90296944-90297444 ( 7) ATAAGAGCA 1 chr2:48279284-48279784 ( 68) AAATCAGCA 1 chr4:24646064-24646564 ( 6) AAAAGGACA 1 chr10:29657848-29658348 ( 25) AAAAGGACA 1 chr16:12120449-12120949 ( 70) AAAACAACA 1 chr6:165674339-165674839 ( 70) AAAAGATCA 1 chr15:100307400-10030790 ( 59) AAAACGGCA 1 chr7:27165504-27166004 ( 63) AAAAGATCA 1 chr5:96935710-96936210 ( 46) AAAAGCACA 1 chr10:22912181-22912681 ( 2) AAAAGATCA 1 chr4:119730150-119730650 ( 51) AAAAGCACA 1 chr6:15504743-15505243 ( 20) AAAAGCACA 1 chr11:92838914-92839414 ( 55) AAATGCGCA 1 chr2:189836632-189837132 ( 37) AAAAGATCA 1 chr11:116853574-11685407 ( 38) AAAAGATCA 1 chr18:50631730-50632230 ( 24) AAAAGCACA 1 chr9:125904301-125904801 ( 87) AAAACGGCA 1 chr9:125887119-125887619 ( 62) AAAAGCACA 1 chrX:136039451-136039951 ( 69) AAAGGAACA 1 chr2:216750784-216751284 ( 67) AAAGGAACA 1 chr3:50671240-50671740 ( 3) GAATGAGCA 1 chr8:37452485-37452985 ( 64) AAAACCGCA 1 chr6:69861971-69862471 ( 32) GAATGAGCA 1 chr10:11773673-11774173 ( 57) GAAAGAACA 1 chr6:112232860-112233360 ( 57) GAATGAGCA 1 chr6:21953882-21954382 ( 34) AAAACCGCA 1 chr4:182556012-182556512 ( 62) GAATGAGCA 1 chr10:75358946-75359446 ( 63) AAAGGGGCA 1 chr11:46948368-46948868 ( 75) AAAGCAGCA 1 chr17:70969487-70969987 ( 40) AAAGCAGCA 1 chr19:45406136-45406636 ( 25) AAAGGGGCA 1 chr3:182365018-182365518 ( 66) AAAGCAGCA 1 chr10:77287672-77288172 ( 59) GAAAGGGCA 1 chr1:234603820-234604320 ( 56) GAAAGGGCA 1 chr14:96888565-96889065 ( 8) GAAACAGCA 1 chr8:99323779-99324279 ( 57) ATATGAGCA 1 chr8:120266326-120266826 ( 16) AAATCAACA 1 chr14:68140343-68140843 ( 12) ATAAGAACA 1 chr12:114656063-11465656 ( 48) ATAAGAACA 1 chr12:64665902-64666402 ( 30) ATATGAGCA 1 chr1:88145571-88146071 ( 56) AAATCAACA 1 chr5:160119295-160119795 ( 13) AAACGAGCA 1 chr6:111888888-111889388 ( 85) AAAGGCGCA 1 chr10:44752630-44753130 ( 27) ATAACAGCA 1 chr6:2028542-2029042 ( 24) AAAACGACA 1 chr1:67719801-67720301 ( 30) GAAGGAGCA 1 chr1:52955618-52956118 ( 4) GAAGGAGCA 1 chr3:157913589-157914089 ( 57) ATAAGGGCA 1 chr6:150753371-150753871 ( 66) AAATGCACA 1 chr15:65832750-65833250 ( 27) GAAGGAGCA 1 chr6:123841223-123841723 ( 66) ATAAGGGCA 1 chr1:67393214-67393714 ( 30) AAAACGACA 1 chr3:158168014-158168514 ( 34) AAATGATCA 1 chr14:24179957-24180457 ( 31) AAATGCACA 1 chr21:35256454-35256954 ( 81) ATAACAGCA 1 chr12:65593199-65593699 ( 63) AAATGCACA 1 chr7:132485146-132485646 ( 28) AAAACATCA 1 chr15:69855589-69856089 ( 18) AAAACCACA 1 chr2:38394734-38395234 ( 47) AAAACCACA 1 chr15:81950810-81951310 ( 88) GAATGAACA 1 chr6:82877087-82877587 ( 56) AAAACCACA 1 chr9:18976648-18977148 ( 66) AAAACCACA 1 chr6:152572623-152573123 ( 4) AAAACATCA 1 chr5:82406264-82406764 ( 83) AAAAGGTCA 1 chr2:11830150-11830650 ( 92) AAAACCACA 1 chr7:85049426-85049926 ( 35) AAAACCACA 1 chr10:75593140-75593640 ( 8) AAAGCAACA 1 chr2:205866025-205866525 ( 70) AAAGGGACA 1 chr12:121202889-12120338 ( 30) AAAAGCTCA 1 chr5:99900406-99900906 ( 27) GAATGGGCA 1 chr5:16889600-16890100 ( 61) GAAAGGACA 1 chr2:53987364-53987864 ( 45) GTAAGAGCA 1 chr8:27603175-27603675 ( 55) GTAAGAGCA 1 chr17:76716680-76717180 ( 77) GAAAGGACA 1 chr17:9565980-9566480 ( 21) AAAAGCTCA 1 chr5:122332965-122333465 ( 27) AAAAGCTCA 1 chr4:128393244-128393744 ( 42) AAAGGATCA 1 chr6:39059651-39060151 ( 51) AAACGGGCA 1 chr10:28202987-28203487 ( 41) ATAACAACA 1 chr7:121313645-121314145 ( 24) AAACCAGCA 1 chr19:34184800-34185300 ( 84) ATAAGGACA 1 chr18:35583151-35583651 ( 26) AAACCAGCA 1 chr6:82260172-82260672 ( 69) AAATCCACA 1 chr13:37046880-37047380 ( 81) AAATCATCA 1 chr4:179750397-179750897 ( 86) AAATCATCA 1 chr9:131633655-131634155 ( 11) AAATGGTCA 1 chr10:112956514-11295701 ( 35) AAATCCACA 1 chr2:109213979-109214479 ( 69) ATAAGATCA 1 chr15:36948886-36949386 ( 68) ATAACGGCA 1 chr6:1597039-1597539 ( 91) AAATCCACA 1 chr1:80403332-80403832 ( 53) ATAGGAACA 1 chr9:125894467-125894967 ( 63) GTATGAGCA 1 chr12:54359104-54359604 ( 81) GAACGAGCA 1 chr12:54052043-54052543 ( 31) AAAACGTCA 1 chr3:42819859-42820359 ( 89) GTAAGAACA 1 chr5:59021170-59021670 ( 61) GAATCAACA 1 chr10:101485924-10148642 ( 87) ATAGCAGCA 1 chr4:139557104-139557604 ( 52) ATAACGACA 1 chr14:76486237-76486737 ( 70) AAACGATCA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAAAGARCA MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 9 n= 55200 bayes= 10.09 E= 3.6e-041 160 -1421 -60 -1421 161 -1421 -1421 -110 182 -1421 -1421 -1421 106 -277 -90 -13 -1421 26 177 -1421 124 -65 -18 -1421 23 -1421 139 -150 -1421 221 -1421 -1421 182 -1421 -1421 -1421 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAAAGARCA MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 9 nsites= 189 E= 3.6e-041 0.857143 0.000000 0.142857 0.000000 0.867725 0.000000 0.000000 0.132275 1.000000 0.000000 0.000000 0.000000 0.592593 0.031746 0.116402 0.259259 0.000000 0.259259 0.740741 0.000000 0.671958 0.137566 0.190476 0.000000 0.333333 0.000000 0.566138 0.100529 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAAAGARCA MEME-1 regular expression -------------------------------------------------------------------------------- AAA[AT][GC]A[GA]CA -------------------------------------------------------------------------------- Time 361.68 secs. ******************************************************************************** ******************************************************************************** MOTIF HAAHAHAAACAM MEME-2 width = 12 sites = 97 llr = 917 E-value = 6.2e-033 ******************************************************************************** -------------------------------------------------------------------------------- Motif HAAHAHAAACAM MEME-2 Description -------------------------------------------------------------------------------- Simplified A 47a474a8a:a5 pos.-specific C 41:214:2:a:4 probability G :::22::::::2 matrix T 22:3:3:::::: bits 2.2 * 2.0 * 1.8 * * *** 1.5 * * *** Relative 1.3 * ***** Entropy 1.1 * ***** (13.6 bits) 0.9 * * ***** 0.7 ** * ****** 0.4 *** ******** 0.2 *** ******** 0.0 ------------ Multilevel AAAAAAAAACAA consensus C T C C sequence T T -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif HAAHAHAAACAM MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ------------ chr3:16482919-16483419 + 70 9.21e-08 TAAGGAAAGG CAAAACAAACAC TTCAGAGTAC chr14:51581305-51581805 + 49 9.21e-08 AGACTTAAAG CAAAACAAACAC ATGGTGGAGA chr13:46674980-46675480 + 55 6.69e-07 AGGCAGCTGT AAAAACAAACAC ACTGTTAGAA chr6:21753699-21754199 - 30 6.69e-07 TAGCTGCAAG AAAAACAAACAC CATTTCAGTG chr10:50463955-50464455 + 32 1.06e-06 ttaccacaat aaaaacaaACAA gagattatcc chr5:34576837-34577337 - 54 1.06e-06 CCAATGTTTT AAAAACAAACAA GGACAACTAT chr6:75413242-75413742 - 64 1.06e-06 TGGGGTAAAG AAAAACAAACAA CATACAAAAC chr12:39047548-39048048 - 75 1.06e-06 GTCACCTGAT CAACACAAACAC ATGTGATGTT chr5:59303192-59303692 - 24 2.15e-06 AAAGCAAATG CAATAAAAACAA AGATAAATAG chr15:59785957-59786457 + 49 2.15e-06 aaagcaaatc caataaaaacaa agataaacag chr1:223518543-223519043 + 60 2.15e-06 aaagcaaatg caataaaaacaa agataaacag chr2:156781649-156782149 + 63 2.15e-06 aaagcaaaca caataaaaacaa agataaatac chr12:43193039-43193539 - 71 2.15e-06 AAAGCAAATG CAATAAAAACAA AGATAAATAG chr9:77150631-77151131 - 22 2.15e-06 TGACTTGTGC CAATAAAAACAA TAAAAGTAAT chr2:216750784-216751284 + 8 2.15e-06 gcaaatg caataaaaacaa aggtaaatag chr15:69143656-69144156 - 27 2.83e-06 ATCAAGCCTA TAAAACAAACAC CTATCACAGT chr1:151980342-151980842 - 11 2.83e-06 CTCTTTGTGC CAACAAAAACAC ACGGATCCCA chr1:100894497-100894997 - 28 2.83e-06 CTTGGTTTAG AAAAAAAAACAA AAATGAGCAA chr20:20211445-20211945 - 71 3.78e-06 TATGAAAAAA TAAAACAAACAA AACCTGGGAC chr6:84353737-84354237 + 55 3.78e-06 aaaaaaaaaa caacaaaaacaa aagaaCTGCT chr6:90215928-90216428 + 79 3.78e-06 CTAGTCCTCA CAAAACAAACAG AGGAAATTTA chr1:198837492-198837992 - 13 4.68e-06 CTCTTTATGA CAAGAAAAACAA GAAGGAACAG chr6:129183861-129184361 - 32 4.68e-06 TTGGGAAAAG CAATATAAACAA CAACAAAAAG chr13:22114718-22115218 - 41 4.68e-06 CTGTTGTTAG AAAGACAAACAA TGACTTGAAA chr17:9565980-9566480 + 5 6.78e-06 ctgc caaaaaaaacag gaaaaaaagc chr9:95721042-95721542 + 16 6.78e-06 GGATCACCAG CAACATAAACAA AGGGTTTATC chr1:8439036-8439536 + 21 7.87e-06 AAGGCCACTG TAATAAAAACAC ACTTCCTGCT chr12:48021673-48022173 + 21 9.12e-06 ACAATGGACC CTAAACAAACAC ATTAACAACC chr16:12120449-12120949 - 22 9.12e-06 CCAGGGACCC AAACATAAACAC AGACACACAG chr8:109611202-109611702 + 36 1.06e-05 ACCCTGCCAT AAAGATAAACAC TAAGTCCACT chr4:119730150-119730650 + 1 1.06e-05 . AAACATAAACAA TGTTTGTGAA chr2:24540035-24540535 + 65 1.22e-05 ATTATATCCT Taacaaaaacaa gtggctataa chr20:53611343-53611843 + 36 1.22e-05 GGAACCATTT AAAAacacacac acacacacac chr5:119328741-119329241 - 48 1.43e-05 CTTGCAGCAC CAATGAAAACAC TAAATCAGCA chrX:136057544-136058044 + 39 1.43e-05 TCTGTTCTAA CCATACAAACAA TGTTTCCAAT chr7:69232633-69233133 + 35 1.43e-05 ATTCTTGTGG AAATGCAAACAC ATCACTAATG chr11:19519961-19520461 + 61 1.43e-05 CGATGCACTC ATAAACAAACAC TCATGGGCAT chr5:126875242-126875742 - 16 1.43e-05 AATGTCTTAG ATAAACAAACAC GGTGTCAGTC chr12:106074924-10607542 - 15 1.62e-05 GAGTGGGCCA TAACATAAACAC ACTTCTCCAG chr12:26275468-26275968 + 9 1.62e-05 GAGGTCAA ACAAACAAACAA AACCCCTGAG chr2:222176771-222177271 + 65 1.62e-05 TTGGGTCACT ATAAACAAACAA CTTAGGTCAG chr18:34491668-34492168 - 24 1.86e-05 TAATAACCCA AAAAGAAAACAA ATAGTATGAA chr17:71181036-71181536 + 46 1.86e-05 GCCAGGCCAA CCAGACAAACAC AATAAACAGG chr7:121313645-121314145 - 12 1.86e-05 GAAACCAGCA CCAGACAAACAC AGTGGAGCCA chr1:229218476-229218976 - 8 1.86e-05 AGCTATACAG AAAAGAAAACAA ACTGTAA chr17:37488178-37488678 + 54 2.17e-05 TGCTGAGCAG AAATGAAAACAC ACAATCCTTT chr1:228902961-228903461 - 33 2.17e-05 ATAAATGACC AAATATAAACAG TGGAGTGGTG chr5:54302207-54302707 + 49 2.17e-05 ttaggtgatc caaggaaaacac tcagcactgt chr19:40920902-40921402 - 42 2.17e-05 CCCAGGAGGA TAAGATAAACAA TCCTGATTTT chr19:40645706-40646206 - 24 2.17e-05 CACAGTTATG TAAAACACACAC GTGCACACAC chr12:122368338-12236883 + 87 2.17e-05 TGCCATATTC CAAGATAAACAG CT chr18:10122142-10122642 - 86 2.17e-05 TTC AAACACACACAC CCAAACATGA chr3:42819859-42820359 - 16 2.17e-05 ATTATGCAAT CAAGATAAACAG ATGGTGTCTC chr2:205280652-205281152 - 20 2.17e-05 AGCCAGCAAA CTAAATAAACAC TTCATCCAAA chr1:116472328-116472828 - 68 2.46e-05 TCAGCAAAGG CAAGGAAAACAA TAGCTTCTCT chr1:223819708-223820208 + 64 2.46e-05 ataaactaat aaacacacacaa agagtgacgg chr5:124599547-124600047 + 78 2.46e-05 CCCCATTCTC TTAAACAAACAC AGACTTCCTT chr2:144430814-144431314 + 19 2.46e-05 AACTCTCCAG AAACACACACAA AAAAACAAGT chr18:31206721-31207221 + 88 2.80e-05 AGCCACAATA TAAAGAAAACAC T chr1:3403749-3404249 - 43 2.80e-05 TGTGTTTATG TAAAGAAAACAC GGACCCTCTT chr5:175385615-175386115 + 86 2.80e-05 aggtgaatgg ctaaacaaacag tgg chr1:59214654-59215154 + 21 3.14e-05 CCAGTTCATG TTATACAAACAC ACAGAAATGT chr11:126115877-12611637 + 59 3.14e-05 CGCTCCTAGA ATAAATAAACAC CACACGCTTA chr18:39741936-39742436 - 46 3.51e-05 GTCTCAGTGC CAATCCAAACAA TGATATGACT chr10:75294724-75295224 - 14 3.91e-05 GCTGACAGAG AAATATACACAA CAGCGTAACC chr7:26534961-26535461 + 80 3.91e-05 CGAGGGCTTA aaaaccaaacaa aacaaaaca chr4:81808111-81808611 + 39 3.91e-05 GTTTCCTTTG CCAAAAAAACAG TGCACTCGTT chr6:152572623-152573123 + 59 3.91e-05 CCAACAGAGC ATACAAAAACAA ATCAGCCACA chr10:99519982-99520482 - 55 3.91e-05 TTTATCGCGG TAAAGTAAACAC CATTATCCTA chr6:330845-331345 - 75 3.91e-05 GTACACTGAA ATACAAAAACAA GCTCAGTTAA chr6:165674339-165674839 - 21 4.29e-05 TTTATAGTCC TCATAAAAACAC CAGGAGCCAG chr7:83267166-83267666 + 89 4.29e-05 ATTTGCTTGC ATATATAAACAA chr13:79918543-79919043 - 32 4.70e-05 CACTTCATGT TTATAAAAACAA ACTCCATTAA chr10:7302358-7302858 - 36 4.70e-05 ACCTTCTTTC TCATAAAAACAA GAATCAAGCC chr17:48570901-48571401 + 16 5.13e-05 ATGTCCACGT TCAAATAAACAA GCGCCTGATC chr21:37547173-37547673 + 20 5.58e-05 AAAGCGAAGA AAAGACACACAG GTCATATATT chr11:116853574-11685407 - 17 5.58e-05 TTGACTTTGC AAATAAACACAG CAGCATAACC chr10:44752834-44753334 - 72 6.02e-05 TTCAATTCAC CAATCTAAACAA CCTTGGCCAT chr20:18428715-18429215 + 5 6.02e-05 TTGC CAATCTAAACAA CTCCTAAAGG chr7:85049426-85049926 + 83 6.02e-05 TGTCATCGGC CTAAAAACACAA ATCTTC chr5:119063510-119064010 - 24 6.02e-05 ACAGATAAGG AAACGAAAACAG TAAAGGGCAG chr6:144657653-144658153 - 35 6.43e-05 ATCACCACCA CCACACACACAA AAAAATAAAT chr16:22232692-22233192 + 59 6.94e-05 GGCCTCCCTC CAAGGAACACAC CCAGCAGGTA chr1:224623832-224624332 - 56 6.94e-05 GGAAAAGAGA TAAGATACACAA ATAGCAAAAT chr5:10606950-10607450 + 15 7.44e-05 TGTTACACGC ACACACACAcac tcagaataga chr20:20215877-20216377 + 10 7.91e-05 CCCCAGCAG TCATGCAAACAC ATTTATACCA chr4:182556012-182556512 + 46 7.91e-05 GCTGAGATTG CAATGCACACAG GCACTGCTCA chr12:58925125-58925625 + 17 8.39e-05 GACAAGAATG AAAGCTAAACAC TCAGTACTTG chr1:201721105-201721605 + 84 8.39e-05 CCCAGTAATT TAATGTAAACAG TCACT chr5:125485037-125485537 - 89 8.39e-05 . TAACAAACACAG CCATTCGTGT chr8:37360480-37360980 - 18 9.42e-05 CACTCTGCTG TCATATAAACAG TGTAATTTCA chr4:154030674-154031174 - 29 9.86e-05 ACAGTTATCT TAAGGTAAACAG TTCGACTGTA chr3:48087439-48087939 + 72 1.03e-04 GCGCGcacac acacatacacac gcacgcgcac chr5:56112433-56112933 - 58 1.09e-04 CAGAATTTTC TAAGGAACACAA ACAGAATCTT chr6:4320822-4321322 - 46 1.13e-04 ATCTTCATTG CTATGTAAACAG TAAGAAACAT chr16:22728335-22728835 - 47 1.13e-04 AGATTAAAAT ATAACAAAACAA AAAGGTTCCA chr19:34184800-34185300 - 32 1.13e-04 GAGTGATGTA ATAACAAAACAA TACTGGCTCC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif HAAHAHAAACAM MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr3:16482919-16483419 9.2e-08 69_[+2]_19 chr14:51581305-51581805 9.2e-08 48_[+2]_40 chr13:46674980-46675480 6.7e-07 54_[+2]_34 chr6:21753699-21754199 6.7e-07 29_[-2]_59 chr10:50463955-50464455 1.1e-06 31_[+2]_57 chr5:34576837-34577337 1.1e-06 53_[-2]_35 chr6:75413242-75413742 1.1e-06 63_[-2]_25 chr12:39047548-39048048 1.1e-06 74_[-2]_14 chr5:59303192-59303692 2.2e-06 23_[-2]_65 chr15:59785957-59786457 2.2e-06 48_[+2]_40 chr1:223518543-223519043 2.2e-06 59_[+2]_29 chr2:156781649-156782149 2.2e-06 62_[+2]_26 chr12:43193039-43193539 2.2e-06 70_[-2]_18 chr9:77150631-77151131 2.2e-06 21_[-2]_67 chr2:216750784-216751284 2.2e-06 7_[+2]_81 chr15:69143656-69144156 2.8e-06 26_[-2]_62 chr1:151980342-151980842 2.8e-06 10_[-2]_78 chr1:100894497-100894997 2.8e-06 27_[-2]_61 chr20:20211445-20211945 3.8e-06 70_[-2]_18 chr6:84353737-84354237 3.8e-06 54_[+2]_34 chr6:90215928-90216428 3.8e-06 78_[+2]_10 chr1:198837492-198837992 4.7e-06 12_[-2]_76 chr6:129183861-129184361 4.7e-06 31_[-2]_57 chr13:22114718-22115218 4.7e-06 40_[-2]_48 chr17:9565980-9566480 6.8e-06 4_[+2]_84 chr9:95721042-95721542 6.8e-06 15_[+2]_73 chr1:8439036-8439536 7.9e-06 20_[+2]_68 chr12:48021673-48022173 9.1e-06 20_[+2]_68 chr16:12120449-12120949 9.1e-06 21_[-2]_67 chr8:109611202-109611702 1.1e-05 35_[+2]_53 chr4:119730150-119730650 1.1e-05 [+2]_88 chr2:24540035-24540535 1.2e-05 64_[+2]_24 chr20:53611343-53611843 1.2e-05 35_[+2]_53 chr5:119328741-119329241 1.4e-05 47_[-2]_41 chrX:136057544-136058044 1.4e-05 38_[+2]_50 chr7:69232633-69233133 1.4e-05 34_[+2]_54 chr11:19519961-19520461 1.4e-05 60_[+2]_28 chr5:126875242-126875742 1.4e-05 15_[-2]_73 chr12:106074924-10607542 1.6e-05 14_[-2]_74 chr12:26275468-26275968 1.6e-05 8_[+2]_80 chr2:222176771-222177271 1.6e-05 64_[+2]_24 chr18:34491668-34492168 1.9e-05 23_[-2]_65 chr17:71181036-71181536 1.9e-05 45_[+2]_43 chr7:121313645-121314145 1.9e-05 11_[-2]_77 chr1:229218476-229218976 1.9e-05 7_[-2]_81 chr17:37488178-37488678 2.2e-05 53_[+2]_35 chr1:228902961-228903461 2.2e-05 32_[-2]_56 chr5:54302207-54302707 2.2e-05 48_[+2]_40 chr19:40920902-40921402 2.2e-05 41_[-2]_47 chr19:40645706-40646206 2.2e-05 23_[-2]_65 chr12:122368338-12236883 2.2e-05 86_[+2]_2 chr18:10122142-10122642 2.2e-05 85_[-2]_3 chr3:42819859-42820359 2.2e-05 15_[-2]_73 chr2:205280652-205281152 2.2e-05 19_[-2]_69 chr1:116472328-116472828 2.5e-05 67_[-2]_21 chr1:223819708-223820208 2.5e-05 63_[+2]_25 chr5:124599547-124600047 2.5e-05 77_[+2]_11 chr2:144430814-144431314 2.5e-05 18_[+2]_70 chr18:31206721-31207221 2.8e-05 87_[+2]_1 chr1:3403749-3404249 2.8e-05 42_[-2]_46 chr5:175385615-175386115 2.8e-05 85_[+2]_3 chr1:59214654-59215154 3.1e-05 20_[+2]_68 chr11:126115877-12611637 3.1e-05 58_[+2]_30 chr18:39741936-39742436 3.5e-05 45_[-2]_43 chr10:75294724-75295224 3.9e-05 13_[-2]_75 chr7:26534961-26535461 3.9e-05 79_[+2]_9 chr4:81808111-81808611 3.9e-05 38_[+2]_50 chr6:152572623-152573123 3.9e-05 58_[+2]_30 chr10:99519982-99520482 3.9e-05 54_[-2]_34 chr6:330845-331345 3.9e-05 74_[-2]_14 chr6:165674339-165674839 4.3e-05 20_[-2]_68 chr7:83267166-83267666 4.3e-05 88_[+2] chr13:79918543-79919043 4.7e-05 31_[-2]_57 chr10:7302358-7302858 4.7e-05 35_[-2]_53 chr17:48570901-48571401 5.1e-05 15_[+2]_73 chr21:37547173-37547673 5.6e-05 19_[+2]_69 chr11:116853574-11685407 5.6e-05 16_[-2]_72 chr10:44752834-44753334 6e-05 71_[-2]_17 chr20:18428715-18429215 6e-05 4_[+2]_84 chr7:85049426-85049926 6e-05 82_[+2]_6 chr5:119063510-119064010 6e-05 23_[-2]_65 chr6:144657653-144658153 6.4e-05 34_[-2]_54 chr16:22232692-22233192 6.9e-05 58_[+2]_30 chr1:224623832-224624332 6.9e-05 55_[-2]_33 chr5:10606950-10607450 7.4e-05 14_[+2]_74 chr20:20215877-20216377 7.9e-05 9_[+2]_79 chr4:182556012-182556512 7.9e-05 45_[+2]_43 chr12:58925125-58925625 8.4e-05 16_[+2]_72 chr1:201721105-201721605 8.4e-05 83_[+2]_5 chr5:125485037-125485537 8.4e-05 88_[-2] chr8:37360480-37360980 9.4e-05 17_[-2]_71 chr4:154030674-154031174 9.9e-05 28_[-2]_60 chr3:48087439-48087939 0.0001 71_[+2]_17 chr5:56112433-56112933 0.00011 57_[-2]_31 chr6:4320822-4321322 0.00011 45_[-2]_43 chr16:22728335-22728835 0.00011 46_[-2]_42 chr19:34184800-34185300 0.00011 31_[-2]_57 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif HAAHAHAAACAM MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF HAAHAHAAACAM width=12 seqs=97 chr3:16482919-16483419 ( 70) CAAAACAAACAC 1 chr14:51581305-51581805 ( 49) CAAAACAAACAC 1 chr13:46674980-46675480 ( 55) AAAAACAAACAC 1 chr6:21753699-21754199 ( 30) AAAAACAAACAC 1 chr10:50463955-50464455 ( 32) AAAAACAAACAA 1 chr5:34576837-34577337 ( 54) AAAAACAAACAA 1 chr6:75413242-75413742 ( 64) AAAAACAAACAA 1 chr12:39047548-39048048 ( 75) CAACACAAACAC 1 chr5:59303192-59303692 ( 24) CAATAAAAACAA 1 chr15:59785957-59786457 ( 49) CAATAAAAACAA 1 chr1:223518543-223519043 ( 60) CAATAAAAACAA 1 chr2:156781649-156782149 ( 63) CAATAAAAACAA 1 chr12:43193039-43193539 ( 71) CAATAAAAACAA 1 chr9:77150631-77151131 ( 22) CAATAAAAACAA 1 chr2:216750784-216751284 ( 8) CAATAAAAACAA 1 chr15:69143656-69144156 ( 27) TAAAACAAACAC 1 chr1:151980342-151980842 ( 11) CAACAAAAACAC 1 chr1:100894497-100894997 ( 28) AAAAAAAAACAA 1 chr20:20211445-20211945 ( 71) TAAAACAAACAA 1 chr6:84353737-84354237 ( 55) CAACAAAAACAA 1 chr6:90215928-90216428 ( 79) CAAAACAAACAG 1 chr1:198837492-198837992 ( 13) CAAGAAAAACAA 1 chr6:129183861-129184361 ( 32) CAATATAAACAA 1 chr13:22114718-22115218 ( 41) AAAGACAAACAA 1 chr17:9565980-9566480 ( 5) CAAAAAAAACAG 1 chr9:95721042-95721542 ( 16) CAACATAAACAA 1 chr1:8439036-8439536 ( 21) TAATAAAAACAC 1 chr12:48021673-48022173 ( 21) CTAAACAAACAC 1 chr16:12120449-12120949 ( 22) AAACATAAACAC 1 chr8:109611202-109611702 ( 36) AAAGATAAACAC 1 chr4:119730150-119730650 ( 1) AAACATAAACAA 1 chr2:24540035-24540535 ( 65) TAACAAAAACAA 1 chr20:53611343-53611843 ( 36) AAAAACACACAC 1 chr5:119328741-119329241 ( 48) CAATGAAAACAC 1 chrX:136057544-136058044 ( 39) CCATACAAACAA 1 chr7:69232633-69233133 ( 35) AAATGCAAACAC 1 chr11:19519961-19520461 ( 61) ATAAACAAACAC 1 chr5:126875242-126875742 ( 16) ATAAACAAACAC 1 chr12:106074924-10607542 ( 15) TAACATAAACAC 1 chr12:26275468-26275968 ( 9) ACAAACAAACAA 1 chr2:222176771-222177271 ( 65) ATAAACAAACAA 1 chr18:34491668-34492168 ( 24) AAAAGAAAACAA 1 chr17:71181036-71181536 ( 46) CCAGACAAACAC 1 chr7:121313645-121314145 ( 12) CCAGACAAACAC 1 chr1:229218476-229218976 ( 8) AAAAGAAAACAA 1 chr17:37488178-37488678 ( 54) AAATGAAAACAC 1 chr1:228902961-228903461 ( 33) AAATATAAACAG 1 chr5:54302207-54302707 ( 49) CAAGGAAAACAC 1 chr19:40920902-40921402 ( 42) TAAGATAAACAA 1 chr19:40645706-40646206 ( 24) TAAAACACACAC 1 chr12:122368338-12236883 ( 87) CAAGATAAACAG 1 chr18:10122142-10122642 ( 86) AAACACACACAC 1 chr3:42819859-42820359 ( 16) CAAGATAAACAG 1 chr2:205280652-205281152 ( 20) CTAAATAAACAC 1 chr1:116472328-116472828 ( 68) CAAGGAAAACAA 1 chr1:223819708-223820208 ( 64) AAACACACACAA 1 chr5:124599547-124600047 ( 78) TTAAACAAACAC 1 chr2:144430814-144431314 ( 19) AAACACACACAA 1 chr18:31206721-31207221 ( 88) TAAAGAAAACAC 1 chr1:3403749-3404249 ( 43) TAAAGAAAACAC 1 chr5:175385615-175386115 ( 86) CTAAACAAACAG 1 chr1:59214654-59215154 ( 21) TTATACAAACAC 1 chr11:126115877-12611637 ( 59) ATAAATAAACAC 1 chr18:39741936-39742436 ( 46) CAATCCAAACAA 1 chr10:75294724-75295224 ( 14) AAATATACACAA 1 chr7:26534961-26535461 ( 80) AAAACCAAACAA 1 chr4:81808111-81808611 ( 39) CCAAAAAAACAG 1 chr6:152572623-152573123 ( 59) ATACAAAAACAA 1 chr10:99519982-99520482 ( 55) TAAAGTAAACAC 1 chr6:330845-331345 ( 75) ATACAAAAACAA 1 chr6:165674339-165674839 ( 21) TCATAAAAACAC 1 chr7:83267166-83267666 ( 89) ATATATAAACAA 1 chr13:79918543-79919043 ( 32) TTATAAAAACAA 1 chr10:7302358-7302858 ( 36) TCATAAAAACAA 1 chr17:48570901-48571401 ( 16) TCAAATAAACAA 1 chr21:37547173-37547673 ( 20) AAAGACACACAG 1 chr11:116853574-11685407 ( 17) AAATAAACACAG 1 chr10:44752834-44753334 ( 72) CAATCTAAACAA 1 chr20:18428715-18429215 ( 5) CAATCTAAACAA 1 chr7:85049426-85049926 ( 83) CTAAAAACACAA 1 chr5:119063510-119064010 ( 24) AAACGAAAACAG 1 chr6:144657653-144658153 ( 35) CCACACACACAA 1 chr16:22232692-22233192 ( 59) CAAGGAACACAC 1 chr1:224623832-224624332 ( 56) TAAGATACACAA 1 chr5:10606950-10607450 ( 15) ACACACACACAC 1 chr20:20215877-20216377 ( 10) TCATGCAAACAC 1 chr4:182556012-182556512 ( 46) CAATGCACACAG 1 chr12:58925125-58925625 ( 17) AAAGCTAAACAC 1 chr1:201721105-201721605 ( 84) TAATGTAAACAG 1 chr5:125485037-125485537 ( 89) TAACAAACACAG 1 chr8:37360480-37360980 ( 18) TCATATAAACAG 1 chr4:154030674-154031174 ( 29) TAAGGTAAACAG 1 chr3:48087439-48087939 ( 72) ACACATACACAC 1 chr5:56112433-56112933 ( 58) TAAGGAACACAA 1 chr6:4320822-4321322 ( 46) CTATGTAAACAG 1 chr16:22728335-22728835 ( 47) ATAACAAAACAA 1 chr19:34184800-34185300 ( 32) ATAACAAAACAA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif HAAHAHAAACAM MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 12 n= 53400 bayes= 11.0146 E= 6.2e-033 43 82 -1324 -26 128 -69 -1324 -69 182 -1324 -1324 -1324 31 -22 -39 8 139 -158 -22 -1324 39 78 -1324 -14 182 -1324 -1324 -1324 154 -30 -1324 -1324 182 -1324 -1324 -1324 -1324 221 -1324 -1324 182 -1324 -1324 -1324 71 78 -39 -1324 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif HAAHAHAAACAM MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 12 nsites= 97 E= 6.2e-033 0.381443 0.381443 0.000000 0.237113 0.690722 0.134021 0.000000 0.175258 1.000000 0.000000 0.000000 0.000000 0.350515 0.185567 0.164948 0.298969 0.742268 0.072165 0.185567 0.000000 0.371134 0.371134 0.000000 0.257732 1.000000 0.000000 0.000000 0.000000 0.824742 0.175258 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.463918 0.371134 0.164948 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif HAAHAHAAACAM MEME-2 regular expression -------------------------------------------------------------------------------- [ACT]AA[AT]A[ACT]AAACA[AC] -------------------------------------------------------------------------------- Time 687.96 secs. ******************************************************************************** ******************************************************************************** MOTIF AAAWGGCWV MEME-3 width = 9 sites = 214 llr = 1623 E-value = 3.4e-022 ******************************************************************************** -------------------------------------------------------------------------------- Motif AAAWGGCWV MEME-3 Description -------------------------------------------------------------------------------- Simplified A aa7412:43 pos.-specific C ::1:::a23 probability G ::2:97::4 matrix T :::6:::41 bits 2.2 * 2.0 * 1.8 ** * * 1.5 ** * * Relative 1.3 ** * * Entropy 1.1 ** *** (10.9 bits) 0.9 ** **** 0.7 ******* 0.4 ******** 0.2 ********* 0.0 --------- Multilevel AAATGGCAG consensus GA A TC sequence CA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAAWGGCWV MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- --------- chr4:128393244-128393744 + 77 4.02e-06 ATGAAGGCTC AAATGGCAG AGCTTTCGAG chr1:26692774-26693274 - 31 4.02e-06 AACCGGCTGA AAATGGCAG AGGATGTGCT chr5:92552210-92552710 + 17 4.02e-06 TTACAGCAAC AAATGGCAG GGTTATCAGC chr11:78030450-78030950 + 53 4.02e-06 CCAGCCAGCC AAATGGCAG CTGGGACTCA chr6:32983028-32983528 - 20 4.02e-06 AAAAGGCAGT AAATGGCAG CATGAGGGGA chr6:2021683-2022183 + 10 4.02e-06 GAGGTTGTG AAATGGCAG TCTCATTAAG chr5:124274321-124274821 + 47 4.02e-06 tgtgaaagtt aaatggcag tattcaagca chr17:1252246-1252746 - 23 8.04e-06 TGTTTGCTCC AAATGGCTG GAAAAGCTAT chr3:182697545-182698045 - 63 8.04e-06 TTGTGCTATA AAATGGCTG GCCCATGGCT chr12:19575763-19576263 + 1 8.04e-06 . AAATGGCTG ATAATATCAC chr1:46643342-46643842 + 48 1.61e-05 TTTAAAAACA AAATGGCAC AAGCAGCTAC chr10:125708920-12570942 - 80 1.61e-05 AATGAACTGA AAAAGGCAG AGCAACAGGA chr10:75358946-75359446 + 32 1.61e-05 TTTGGAAATA AAAAGGCAG GTGTTAATTG chr10:35195681-35196181 - 79 1.61e-05 TATTCAGTCT AAAAGGCAG CTTGGAGGCA chr1:26698144-26698644 - 72 1.61e-05 GCTCTGGAAT AAAAGGCAG ATAGTGGCAG chr7:27139689-27140189 - 73 1.61e-05 TCTGAATTCG AAAAGGCAG AGCAAACTTT chr12:1605448-1605948 - 77 1.61e-05 CACAGACATA AAATGGCAC TTGGCAGAAA chr17:76716680-76717180 + 47 1.61e-05 AAACAATTTA AAAAGGCAG GAAGAGTCTA chr1:76294417-76294917 + 24 1.61e-05 TCTGGGCGGT AAAAGGCAG TCAAGCAGAA chr22:38924269-38924769 - 65 1.61e-05 CATGTGCTAG AAATGGCAC TTCAGGACCC chr2:11830150-11830650 - 70 1.61e-05 TCCGGTGCAC AAAAGGCAG AATGAGTCAC chr5:124742105-124742605 + 84 2.72e-05 GAATCCAATC AAATGGCTC TGACTCCT chr15:69855589-69856089 + 34 2.72e-05 ACAAGGCAGG AAAAGGCTG GCTGAGACCA chr13:28336014-28336514 - 34 2.72e-05 AGAATAAATG AAAAGGCTG AGGGAAGCCA chr1:167658715-167659215 + 56 2.72e-05 ttactttccc aaaaggctg taacaagtca chr6:165674339-165674839 + 56 2.72e-05 AGAAAACGTA AAATGGCTC GCTAATGATC chr6:45416625-45417125 - 26 2.72e-05 TGTTGTCATA AAAAGGCTG ACACTTGCCA chr3:138082484-138082984 - 87 2.72e-05 TGCAA AAAAGGCTG GGAAAGTAAA chr7:27139889-27140389 - 7 2.72e-05 ACTCTCTGAA AAATGGCTC CCTCCG chr2:144430814-144431314 + 87 2.72e-05 AAAGGGGGAA AAAAGGCTG TGGAA chr9:13979392-13979892 - 75 3.25e-05 TGAAGCAATC AAATGGCAA AGCTTTTAGC chr1:231106268-231106768 - 56 3.25e-05 CTGAAGCAAA AAATGGCAA AGACTCAAAG chr6:15504743-15505243 - 66 3.25e-05 AGAAGCACAA AAATGGCAA TCTGCCAATC chr20:18428715-18429215 + 52 3.25e-05 CTGCTATTAA AAATGGCAA AGAATCACAC chr6:26029195-26029695 + 24 3.25e-05 agccccaaag aaatggcaa aagctaaatg chr18:59502469-59502969 + 32 4.18e-05 CCCGCAAAAA AAAAGGCAC AGCAGATACA chr14:54818478-54818978 - 86 4.18e-05 AAACCT AAATGGCTA TGGTGTTGCT chr12:65593199-65593699 - 7 4.18e-05 AATGTGTACG AAATGGCTA AGCCCA chr5:91022439-91022939 + 18 4.18e-05 TATTTACTTG AAATGGCTA ACACCCATTT chr7:81299265-81299765 - 88 4.18e-05 TAAG AAAAGGCAC AGCCCTGACA chrX:39705231-39705731 - 38 4.18e-05 TGACTCACTC AAATGGCTA GCAAGTTGCA chr5:34854432-34854932 - 61 5.50e-05 TGGCTGCTGG AAAAGGCTC AAAGTGAAAT chr12:121202889-12120338 + 13 5.50e-05 tctctaaact aaatggccc cagactgatg chr5:78908208-78908708 + 6 5.50e-05 TTAAG AAAAGGCTC AACAGGAACA chr19:3971034-3971534 + 91 5.50e-05 GCGGACGGAA AAAAGGCCG A chr14:68140343-68140843 - 68 5.50e-05 TTTGCATCCC AAGTGGCAG AGAAACCTCA chr11:7690560-7691060 + 60 5.50e-05 tcaaccttta aaatggccc caagcatagt chr12:41288138-41288638 + 81 5.50e-05 GTTAGATAAC AAGTGGCAG TATTTCTCAG chr3:125052661-125053161 + 52 5.50e-05 GAAGAGCTGG AAATGGCCC ACAGGGAAGA chr7:25857505-25858005 - 19 5.50e-05 TCCAAGCGGA AAAAGGCCG AAGTTTACTC chr13:46674980-46675480 - 91 5.50e-05 T AAAAGGCTC TCAATTTTAT chr15:65832750-65833250 - 8 5.50e-05 GCTGGGTGAA AAGTGGCAG GCCGCTA chr19:48872959-48873459 + 25 5.50e-05 GCCATCCTCT AAATGGCCC CTAAACTTTA chr7:36303374-36303874 + 52 5.50e-05 AGGGCTCACT AAGTGGCAG CGTTTCTAAA chr16:30948115-30948615 + 58 5.50e-05 CTAAGGCTGG AAATGGCCC CCTCTTAGTT chr6:1630694-1631194 - 17 5.50e-05 CCTTTTCATT AAATGGCCC CCGCATCACA chr7:69232633-69233133 + 62 5.50e-05 TAATGGTCTA AAATGGCCC TTAATGGAGG chr4:26483984-26484484 - 35 5.50e-05 TTGAAGTGAG AAATGGCCC AGCCACCATG chr16:22232692-22233192 + 37 5.50e-05 TGTTTAACCA AAATGGCCC GCTGGCCTCC chr1:228900262-228900762 - 46 5.50e-05 AGGAAGCTGG AAAAGGCTC TCTCCCATGG chr1:234544054-234544554 - 50 6.33e-05 CACATGCACA AAAAGGCAA ATCTATACAG chr17:2484846-2485346 - 47 6.33e-05 GAGCAATGGA AAGTGGCTG TAAATTCAGA chr16:73056857-73057357 + 15 6.33e-05 GGAGGCCAGA AAAAGGCAA TCAGCATGCT chr17:35729463-35729963 + 17 6.33e-05 CGTGTCCCTA AAAAGGCAa aaagtaaagg chr19:34184800-34185300 - 68 6.33e-05 TATAAAACCA AAAAGGCAA TTTGAAATTT chr10:33388264-33388764 + 69 6.33e-05 AACAGCCAAG AAAAGGCAA CTTTATTGCT chr14:60630082-60630582 + 57 7.26e-05 TCTGTACTGC AAATGGCCA GTTTCACTGC chr12:62803714-62804214 + 22 7.26e-05 gacataaaat aaatggcca gcaggcttgt chr13:22114718-22115218 - 25 7.26e-05 CAATGACTTG AAATGGCCA AAGAGTTAGT chr15:57217710-57218210 - 69 7.26e-05 CCAGATATAG AAAAGGCTA AGCAGCAGCT chr3:181252560-181253060 + 8 7.26e-05 CTGAAGA AAATGGCCA GAACTGACTG chr3:50671240-50671740 - 16 8.18e-05 AGCAGTGGAT AAGTGGCAC ACGATGCTCA chr12:50195808-50196308 + 40 8.18e-05 GCATTTGAAC AAGAGGCAG CAAAATGTCT chr9:20619730-20620230 + 72 8.18e-05 AGGAGCAGTC AAGTGGCAC GCGGGGGTGG chr2:27771505-27772005 - 30 8.18e-05 GTCACCGGCC AAAAGGCCC CCAACCAACA chr6:21264232-21264732 - 62 9.55e-05 AATGAACCGA AAGAGGCTG CATCGTGAAG chr1:80403332-80403832 - 84 9.55e-05 GAAAATTA AAATGACAG TTTTAAGAGA chr4:139557104-139557604 - 41 9.55e-05 TAACGACACT AAGTGGCCG GGCCGGAAGC chr1:151013475-151013975 - 85 9.55e-05 TTGAGAT AAGAGGCTG CAGAAATAAC chr19:15413530-15414030 + 72 9.55e-05 CTGCAACTGC AAATGACAG CCTACCACAC chr1:228781078-228781578 - 78 9.55e-05 TGGTGGTACG AAGAGGCTG GATCTTACAC chr1:8439036-8439536 + 9 1.14e-04 TCAAAATC AAAAGGCCA CTGTAATAAA chr5:56112433-56112933 + 13 1.14e-04 TTATAAAGGA AAAAGGCCA GCAGTTGTCG chr9:123678529-123679029 + 87 1.14e-04 ATTACATAGC AAATGACTG CTGCC chr8:120266326-120266826 + 91 1.14e-04 AATGGTGGCA AAATGGCAT T chr1:51284376-51284876 - 5 1.14e-04 CCAGGATCCT AAAAGGCCA ACAC chr12:89352733-89353233 - 78 1.14e-04 GGGCCTTTAA AAGTGGCAA ACAAATGCCA chr17:71181036-71181536 + 18 1.14e-04 AAAATGAGTG AAATGGCAT GAGCTGGTTG chr7:70098013-70098513 + 77 1.14e-04 GGCCTTCCCC AAGTGGCAA GAAGCCATAA chr20:53611343-53611843 + 84 1.14e-04 CTTAAGTGTT AAGTGGCAA GATACTCT chr13:52804228-52804728 - 2 1.14e-04 GAGGAGGAAG AAAAGGCCA A chr10:7433148-7433648 + 82 1.14e-04 GCCTTTTTCG AAATGACTG TTTTTAAAAG chr13:75903926-75904426 - 81 1.14e-04 AATCACCCAT AAATGGCAT TATCTACCAA chr11:32890805-32891305 - 37 1.14e-04 AATACCAAAC AAGTGGCAA TAAAACCTTT chr10:75294724-75295224 + 52 1.30e-04 GACCCAGCTG AACTGGCAG AGCACTTCAA chr2:175807081-175807581 + 48 1.30e-04 GGTTTAGCTA AAGTGGCTA GGGGTACAGT chr19:30426010-30426510 - 43 1.30e-04 TCTTTTCCAG AAGTGGCTA ATTACTCATA chr10:122113122-12211362 + 50 1.30e-04 GAGGGTGGAA AAGTGGCTA ACTGCACATT chr6:108684732-108685232 - 84 1.30e-04 CACACCAA AAGTGGCTA TCAGCCACCA chr21:35256454-35256954 + 70 1.30e-04 AGTGGCAACT AAGAGGCAC TCTGCTGTTA chr4:140092324-140092824 - 27 1.30e-04 GCGGGGAGTT AAGTGGCTA AGTGACAATT chr18:35583151-35583651 - 40 1.30e-04 TCTGCTGCTT AAGAGGCAC CAAACAAACC chr1:11178286-11178786 - 17 1.51e-04 GGAAGTAATT AACTGGCTG ACATGCTGGG chr18:12520342-12520842 + 39 1.51e-04 tcaaacagaa aaaagacaG ACAGCAGCAA chr17:2484146-2484646 - 69 1.51e-04 GTGGTTATTG AACTGGCTG CTTAACCACA chr14:76486237-76486737 + 2 1.51e-04 G AAGTGGCCC CAGATCCTAT chr2:224678171-224678671 - 2 1.51e-04 GCAAATGGAT AAAAGACAG A chr6:115485330-115485830 + 25 1.51e-04 ATTGACTCAC AAGAGGCTC ATTTTCTGTG chr6:13395390-13395890 + 68 1.51e-04 tatgtaaagc aactggctg ccagtactca chr1:183039928-183040428 - 66 1.51e-04 GGGAGGCACA AAAAGACAG CAGGGATCCA chr21:36567208-36567708 + 33 1.51e-04 CCAAGACGGG AACTGGCTG ATTTATGTCT chr15:33126521-33127021 - 54 1.51e-04 TGGCCCTGCA AACTGGCTG TTCCAGTAAT chr2:59383379-59383879 - 46 1.51e-04 GCAGCAGAAA AAGAGGCTC TCAAAAAACT chr10:117148219-11714871 - 23 1.51e-04 AAACAGATTA AAGAGGCTC AATTTTCCCT chr22:19287243-19287743 - 56 1.75e-04 CTCTGGCATG AAAAGACTG ATCCCCACGT chr3:181328973-181329473 - 49 1.75e-04 TTGGGAATCA AAGAGGCAA TAAAGTGAAA chr8:37380767-37381267 + 39 1.75e-04 ATCAGATTGC AAAAGACTG CAAAACTAAT chr1:182617664-182618164 - 72 1.75e-04 TACTTGCTAG AAATGACTC AGGCACTGGC chr10:80413351-80413851 + 65 1.75e-04 GCATGACTGC AAATGACTC AAAGCTTTGC chr18:32923114-32923614 + 92 1.75e-04 AGCAAAAGAA AAAAGGCAT chr10:125707796-12570829 + 76 1.75e-04 TTTAATAGCT AAATGACTC ACCAGAGTCT chr6:112232860-112233360 + 23 1.75e-04 CTTTTAGCTT AAAAGGCAT TCTCACTCGC chr5:174371583-174372083 - 12 1.75e-04 TGCAACGACC AAATGACTC ATTCTCTAAA chr6:21748614-21749114 - 29 1.75e-04 TCAATAAAAT AAAAGGCAT TCACAGTACA chr10:75617466-75617966 - 86 1.75e-04 AACTGC AAAAGACTG AGGGAGAAAG chr11:44139544-44140044 - 79 1.75e-04 AAGGACTTTA AAATGACTC CACAGGGCCT chr3:158168014-158168514 + 59 1.75e-04 TACCaccatc aaatgactc agctgatcca chr19:38683967-38684467 - 35 1.75e-04 ATAATTACAC AAATGACTC ACATTTATTG chr7:28572460-28572960 - 30 1.75e-04 GCTAGCCCTC AAAAGACTG TTTCATAAAG chr14:61558243-61558743 + 66 1.75e-04 CAGGGTGTAC AAAAGGCAT AGCAGCTCAG chr12:54033463-54033963 + 48 2.04e-04 ACTGTCCACT AAAAGGCTT AGAGGCTGTG chr1:225533188-225533688 + 35 2.04e-04 TTCAGTGGGA AAATGACAA TATTTTATGA chr2:160039435-160039935 + 74 2.04e-04 AAAGGAAGAA AACTGGCAC TGAACAAATA chr5:125190731-125191231 + 3 2.04e-04 GG AAATGGCCT GAGGGAGGCA chr15:67548806-67549306 - 86 2.04e-04 CAGCAG AACTGGCAC CAGGCAGCCG chr12:26275468-26275968 + 54 2.04e-04 GCCCTGTAAG AAAAGGCTT AATGGACCAG chr5:90296944-90297444 - 71 2.04e-04 GTAACAATGG AAAAGGCTT CTAATGTGCA chr6:47034841-47035341 + 69 2.04e-04 tttccactgt aaaaggctt agctgcaagc chr6:93183509-93184009 - 64 2.04e-04 CAGAACCCCC AAATGGCCT CTGCTTATCT chr8:124077231-124077731 - 26 2.04e-04 AATAAAATGT AAGAGGCTA GTGCTGATTA chr18:22342533-22343033 + 71 2.27e-04 GAGCCAAGGT AAGAGGCCC TTTAGTGGAG chr10:8225192-8225692 - 69 2.27e-04 CACAAGCTGC AAAAGACAC AAGACACATA chr20:25252771-25253271 + 46 2.27e-04 tatgaataac aaaagacac ttctttcatt chr15:96047446-96047946 - 35 2.27e-04 GCACTGAATA AAATGACTA ACGCACACAT chr15:74584727-74585227 - 21 2.27e-04 AGTTGCAACA AAGAGGCCC CTTATCAGAT chr3:48237059-48237559 + 90 2.27e-04 gctcctcagc aacaggctg tc chr6:10407653-10408153 + 77 2.27e-04 AAATGTTCAG AAATGACTA CTGCTGCAGT chr10:125633455-12563395 + 66 2.49e-04 TGATGTTTGG AAAAGACCG TTGTTGGAAG chr1:117148046-117148546 - 47 2.49e-04 CACAGCTGGT AAGTGACAG AGCTGAAATG chr13:74324246-74324746 - 87 2.49e-04 ACCAT AAAAGACTC AATTACAGAC chr13:35499026-35499526 + 12 2.49e-04 TCTATTCACA AAAAGACTC CCATAGTGAA chr6:152572623-152573123 - 15 2.49e-04 CTCATAAACT AAATGACCC AGAAAACATC chr14:74140321-74140821 + 12 2.49e-04 GTTAGAAATC AAATGACCC TCTCCAGTGC chr11:130103383-13010388 - 23 2.49e-04 GTTGTTGGCT AAAAGACCG CAAGAGTTCC chr1:59214654-59215154 - 79 2.78e-04 AGCCTGGCAG AAAAGGCCT CTGCCGGGGC chr5:168086173-168086673 - 20 2.78e-04 TCATACCCCA AAGTGGCAT GAAAATGCAA chr7:70044111-70044611 - 81 2.78e-04 ATGTCAAAAC AAAAGGCCT ATGCTAGAAA chr4:119730150-119730650 - 38 2.78e-04 GCTTTTAAAT AACTGGCTA AAAGTGGAAA chr5:17314975-17315475 + 72 2.78e-04 CTTGTAAATG AAAAGACAA GAGACTTCCT chr1:64514088-64514588 + 54 2.78e-04 AAGGGAGTTA AAGAGGCCA AAAATAACAA chr10:44589327-44589827 - 7 2.78e-04 ACGATTAAAC AAGTGACTG AAAAAA chr2:109213979-109214479 + 15 2.78e-04 CGCAGACTGG AAGTGACTG GAAATAAAGC chr6:24960914-24961414 + 35 2.78e-04 agccacataa aaaagacaa gttatgatac chr2:48279284-48279784 + 41 2.78e-04 ATCATTGTAG AAAAGGCCT GCCAGGGAGT chr5:14131880-14132380 + 10 2.78e-04 TGTCTCGCC AAGTGACTG GGTCTTATCT chr12:53321361-53321861 + 54 3.02e-04 GGAAGTGAAG AAAAGACTA ACGGGAAAGA chr6:54879185-54879685 - 21 3.02e-04 AGTTTGTTTG AAAAGACTA AGTGTTGGGA chr3:157913589-157914089 - 17 3.02e-04 CAAAGCTGTA AACTGGCCC TCATTAAGTT chr14:96574768-96575268 - 27 3.02e-04 TTGCTGTAAC AACTGGCCC TACCACTTAA chr5:122493267-122493767 + 24 3.02e-04 GCTGGCTGGG AACTGGCCC GCCAGTGTCT chr22:39748882-39749382 - 20 3.02e-04 ATTATAGATG AAGTGGCTT TTTATAAGCA chr20:20603321-20603821 - 45 3.02e-04 CTTGTTCACC AAGTGGCTT AGAGTTTCAG chr1:220918459-220918959 + 54 3.02e-04 TGTCAACACT AACTGGCCC TAGCCACCTA chr1:198162202-198162702 + 1 3.02e-04 . aaaagacta ggcagAAAAC chr12:54359104-54359604 + 53 3.18e-04 ATCTGCCTGT AAGAGACAG CGAAAGAGAG chr14:24463692-24464192 + 58 3.18e-04 GCAAATAGAT AACAGGCAA GAAAAGCCAC chr6:116933393-116933893 + 37 3.18e-04 TCTTGACGTC AAGAGACAG ATGACTAACT chr5:77853486-77853986 + 72 3.40e-04 GTGAGTGTCT AACAGGCTA TAAATGCTTA chr10:101767495-10176799 - 87 3.40e-04 GCTGC AACTGGCCA AGAATCAATC chr8:119721959-119722459 + 51 3.40e-04 AAACATCATA AACAGGCTA ATGACATGAC chr20:51934168-51934668 + 81 3.40e-04 TGTCAATACA AAGTGACTC AGAGGTGCAT chr10:75379172-75379672 - 20 3.67e-04 TGCATCAAGC AAATGACAT TATTATCCAT chr1:210236274-210236774 - 36 3.67e-04 AGCATCATTA AAGTGACAA TGTCCTTCTG chr3:9142302-9142802 - 86 3.67e-04 GCTGCC AAGTGACAA GCTAATAAAC chr14:50599981-50600481 + 9 3.67e-04 AAAACTGG AAAAGACCA ATCAATGCTC chr15:57090365-57090865 + 19 3.87e-04 CCTTTCATTG AACTGACAG CATGCCTGCA chr9:86141719-86142219 + 34 3.87e-04 aattgtggag aagtgacta gcaaagaaag chr7:114653365-114653865 + 42 3.87e-04 CAGGACTTTA AAGAGACAC CATGGGCCTT chr3:152328780-152329280 - 81 3.87e-04 TTCCTTCCAG AAGTGACTA ATCTTCCTGT chr9:125883545-125884045 + 22 4.33e-04 GGAAACATAA AAATAGCAG TTGGAAAGAT chr13:78618384-78618884 + 36 4.33e-04 aaagggcttt aaaagacat GATTGCTGAA chr6:38975547-38976047 - 48 4.33e-04 ATTGGGAATG AAATAGCAG AGTTAAAGCA chr10:7302358-7302858 + 22 4.33e-04 CTGGGCAATT AACTGGCTT GATTCTTGTT chr9:85743177-85743677 + 5 4.33e-04 AGAT AAATAGCAG CATTACATAG chr5:59303192-59303692 - 11 4.68e-04 AAACAAAGAT AAATAGCTG GGACCTCATT chr7:135716607-135717107 + 35 4.68e-04 tagtgtgtgt aaatgacct cccacagtgc chr6:124822020-124822520 + 4 4.68e-04 CAA AACTGACAC ACCTATAAAC chr5:126015235-126015735 + 53 4.68e-04 CATTGTTTTT AAATAGCTG CAAAGCCAAA chrX:24146367-24146867 - 35 4.68e-04 TATGAATACA AAATAGCTG GTTTCAAAGC chr6:21753699-21754199 - 46 4.68e-04 ACTGCCACTG AAATAGCTG CAAGAAAAAC chr12:43193039-43193539 - 58 4.68e-04 AAACAAAGAT AAATAGCTG GGACCTAATT chr2:216750784-216751284 + 24 4.68e-04 aaacaaaggt aaatagctg ggacctaatt chr7:96621914-96622414 - 23 4.86e-04 AGGAAACATC AACAGGCAT AACATAGCAG chr14:96888565-96889065 - 49 5.14e-04 CTGTGCCTGT AAATGTCAG TCCAGTTTTT chr6:16849427-16849927 - 3 5.14e-04 GTGGGTTTGG AAATGTCAG CC chr9:87140669-87141169 + 80 5.14e-04 TTCCCTGGAG AAATGTCAG CTTAGACAAA chr1:46719588-46720088 + 75 5.14e-04 caaacatatt aaatgtcag gaggtgataa chr20:20215877-20216377 + 64 5.14e-04 TCCTTACTGT AAATGTCAG TGGGTTTCAT chr18:58143306-58143806 - 48 5.14e-04 TCTTATCTTT AAATAGCAC TGCATCATTA chr5:54310302-54310802 + 77 5.58e-04 GCAACAGCGA AAATAGCCG AAAGCAGCCG chr6:21749737-21750237 - 33 5.81e-04 TTTGCAGAGC AACAGACCG TAAATCTCCT chr16:53849954-53850454 - 14 5.81e-04 CTTTCCACTT AAATAGCAA TTCCTCCAGC chr18:59053320-59053820 + 92 6.12e-04 tcatgattat aaatgtcac chr12:109695992-10969649 - 19 6.12e-04 CTGTGTCTGA AAATGTCAC AGGGATTAGG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAAWGGCWV MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr4:128393244-128393744 4e-06 76_[+3]_15 chr1:26692774-26693274 4e-06 30_[-3]_61 chr5:92552210-92552710 4e-06 16_[+3]_75 chr11:78030450-78030950 4e-06 52_[+3]_39 chr6:32983028-32983528 4e-06 19_[-3]_72 chr6:2021683-2022183 4e-06 9_[+3]_82 chr5:124274321-124274821 4e-06 46_[+3]_45 chr17:1252246-1252746 8e-06 22_[-3]_69 chr3:182697545-182698045 8e-06 62_[-3]_29 chr12:19575763-19576263 8e-06 [+3]_91 chr1:46643342-46643842 1.6e-05 47_[+3]_44 chr10:125708920-12570942 1.6e-05 79_[-3]_12 chr10:75358946-75359446 1.6e-05 31_[+3]_60 chr10:35195681-35196181 1.6e-05 78_[-3]_13 chr1:26698144-26698644 1.6e-05 71_[-3]_20 chr7:27139689-27140189 1.6e-05 72_[-3]_19 chr12:1605448-1605948 1.6e-05 76_[-3]_15 chr17:76716680-76717180 1.6e-05 46_[+3]_45 chr1:76294417-76294917 1.6e-05 23_[+3]_68 chr22:38924269-38924769 1.6e-05 64_[-3]_27 chr2:11830150-11830650 1.6e-05 69_[-3]_22 chr5:124742105-124742605 2.7e-05 83_[+3]_8 chr15:69855589-69856089 2.7e-05 33_[+3]_58 chr13:28336014-28336514 2.7e-05 33_[-3]_58 chr1:167658715-167659215 2.7e-05 55_[+3]_36 chr6:165674339-165674839 2.7e-05 55_[+3]_36 chr6:45416625-45417125 2.7e-05 25_[-3]_66 chr3:138082484-138082984 2.7e-05 86_[-3]_5 chr7:27139889-27140389 2.7e-05 6_[-3]_85 chr2:144430814-144431314 2.7e-05 86_[+3]_5 chr9:13979392-13979892 3.2e-05 74_[-3]_17 chr1:231106268-231106768 3.2e-05 55_[-3]_36 chr6:15504743-15505243 3.2e-05 65_[-3]_26 chr20:18428715-18429215 3.2e-05 51_[+3]_40 chr6:26029195-26029695 3.2e-05 23_[+3]_68 chr18:59502469-59502969 4.2e-05 31_[+3]_60 chr14:54818478-54818978 4.2e-05 85_[-3]_6 chr12:65593199-65593699 4.2e-05 6_[-3]_85 chr5:91022439-91022939 4.2e-05 17_[+3]_74 chr7:81299265-81299765 4.2e-05 87_[-3]_4 chrX:39705231-39705731 4.2e-05 37_[-3]_54 chr5:34854432-34854932 5.5e-05 60_[-3]_31 chr12:121202889-12120338 5.5e-05 12_[+3]_79 chr5:78908208-78908708 5.5e-05 5_[+3]_86 chr19:3971034-3971534 5.5e-05 90_[+3]_1 chr14:68140343-68140843 5.5e-05 67_[-3]_24 chr11:7690560-7691060 5.5e-05 59_[+3]_32 chr12:41288138-41288638 5.5e-05 80_[+3]_11 chr3:125052661-125053161 5.5e-05 51_[+3]_40 chr7:25857505-25858005 5.5e-05 18_[-3]_73 chr13:46674980-46675480 5.5e-05 90_[-3]_1 chr15:65832750-65833250 5.5e-05 7_[-3]_84 chr19:48872959-48873459 5.5e-05 24_[+3]_67 chr7:36303374-36303874 5.5e-05 51_[+3]_40 chr16:30948115-30948615 5.5e-05 57_[+3]_34 chr6:1630694-1631194 5.5e-05 16_[-3]_75 chr7:69232633-69233133 5.5e-05 61_[+3]_30 chr4:26483984-26484484 5.5e-05 34_[-3]_57 chr16:22232692-22233192 5.5e-05 36_[+3]_55 chr1:228900262-228900762 5.5e-05 45_[-3]_46 chr1:234544054-234544554 6.3e-05 49_[-3]_42 chr17:2484846-2485346 6.3e-05 46_[-3]_45 chr16:73056857-73057357 6.3e-05 14_[+3]_77 chr17:35729463-35729963 6.3e-05 16_[+3]_75 chr19:34184800-34185300 6.3e-05 67_[-3]_24 chr10:33388264-33388764 6.3e-05 68_[+3]_23 chr14:60630082-60630582 7.3e-05 56_[+3]_35 chr12:62803714-62804214 7.3e-05 21_[+3]_70 chr13:22114718-22115218 7.3e-05 24_[-3]_67 chr15:57217710-57218210 7.3e-05 68_[-3]_23 chr3:181252560-181253060 7.3e-05 7_[+3]_84 chr3:50671240-50671740 8.2e-05 15_[-3]_76 chr12:50195808-50196308 8.2e-05 39_[+3]_52 chr9:20619730-20620230 8.2e-05 71_[+3]_20 chr2:27771505-27772005 8.2e-05 29_[-3]_62 chr6:21264232-21264732 9.6e-05 61_[-3]_30 chr1:80403332-80403832 9.6e-05 83_[-3]_8 chr4:139557104-139557604 9.6e-05 40_[-3]_51 chr1:151013475-151013975 9.6e-05 84_[-3]_7 chr19:15413530-15414030 9.6e-05 71_[+3]_20 chr1:228781078-228781578 9.6e-05 77_[-3]_14 chr1:8439036-8439536 0.00011 8_[+3]_83 chr5:56112433-56112933 0.00011 12_[+3]_79 chr9:123678529-123679029 0.00011 86_[+3]_5 chr8:120266326-120266826 0.00011 90_[+3]_1 chr1:51284376-51284876 0.00011 4_[-3]_87 chr12:89352733-89353233 0.00011 77_[-3]_14 chr17:71181036-71181536 0.00011 17_[+3]_74 chr7:70098013-70098513 0.00011 76_[+3]_15 chr20:53611343-53611843 0.00011 83_[+3]_8 chr13:52804228-52804728 0.00011 1_[-3]_90 chr10:7433148-7433648 0.00011 81_[+3]_10 chr13:75903926-75904426 0.00011 80_[-3]_11 chr11:32890805-32891305 0.00011 36_[-3]_55 chr10:75294724-75295224 0.00013 51_[+3]_40 chr2:175807081-175807581 0.00013 47_[+3]_44 chr19:30426010-30426510 0.00013 42_[-3]_49 chr10:122113122-12211362 0.00013 49_[+3]_42 chr6:108684732-108685232 0.00013 83_[-3]_8 chr21:35256454-35256954 0.00013 69_[+3]_22 chr4:140092324-140092824 0.00013 26_[-3]_65 chr18:35583151-35583651 0.00013 39_[-3]_52 chr1:11178286-11178786 0.00015 16_[-3]_75 chr18:12520342-12520842 0.00015 38_[+3]_53 chr17:2484146-2484646 0.00015 68_[-3]_23 chr14:76486237-76486737 0.00015 1_[+3]_90 chr2:224678171-224678671 0.00015 1_[-3]_90 chr6:115485330-115485830 0.00015 24_[+3]_67 chr6:13395390-13395890 0.00015 67_[+3]_24 chr1:183039928-183040428 0.00015 65_[-3]_26 chr21:36567208-36567708 0.00015 32_[+3]_59 chr15:33126521-33127021 0.00015 53_[-3]_38 chr2:59383379-59383879 0.00015 45_[-3]_46 chr10:117148219-11714871 0.00015 22_[-3]_69 chr22:19287243-19287743 0.00017 55_[-3]_36 chr3:181328973-181329473 0.00017 48_[-3]_43 chr8:37380767-37381267 0.00017 38_[+3]_53 chr1:182617664-182618164 0.00017 71_[-3]_20 chr10:80413351-80413851 0.00017 64_[+3]_27 chr18:32923114-32923614 0.00017 91_[+3] chr10:125707796-12570829 0.00017 75_[+3]_16 chr6:112232860-112233360 0.00017 22_[+3]_69 chr5:174371583-174372083 0.00017 11_[-3]_80 chr6:21748614-21749114 0.00017 28_[-3]_63 chr10:75617466-75617966 0.00017 85_[-3]_6 chr11:44139544-44140044 0.00017 78_[-3]_13 chr3:158168014-158168514 0.00017 58_[+3]_33 chr19:38683967-38684467 0.00017 34_[-3]_57 chr7:28572460-28572960 0.00017 29_[-3]_62 chr14:61558243-61558743 0.00017 65_[+3]_26 chr12:54033463-54033963 0.0002 47_[+3]_44 chr1:225533188-225533688 0.0002 34_[+3]_57 chr2:160039435-160039935 0.0002 73_[+3]_18 chr5:125190731-125191231 0.0002 2_[+3]_89 chr15:67548806-67549306 0.0002 85_[-3]_6 chr12:26275468-26275968 0.0002 53_[+3]_38 chr5:90296944-90297444 0.0002 70_[-3]_21 chr6:47034841-47035341 0.0002 68_[+3]_23 chr6:93183509-93184009 0.0002 63_[-3]_28 chr8:124077231-124077731 0.0002 25_[-3]_66 chr18:22342533-22343033 0.00023 70_[+3]_21 chr10:8225192-8225692 0.00023 68_[-3]_23 chr20:25252771-25253271 0.00023 45_[+3]_46 chr15:96047446-96047946 0.00023 34_[-3]_57 chr15:74584727-74585227 0.00023 20_[-3]_71 chr3:48237059-48237559 0.00023 89_[+3]_2 chr6:10407653-10408153 0.00023 76_[+3]_15 chr10:125633455-12563395 0.00025 65_[+3]_26 chr1:117148046-117148546 0.00025 46_[-3]_45 chr13:74324246-74324746 0.00025 86_[-3]_5 chr13:35499026-35499526 0.00025 11_[+3]_80 chr6:152572623-152573123 0.00025 14_[-3]_77 chr14:74140321-74140821 0.00025 11_[+3]_80 chr11:130103383-13010388 0.00025 22_[-3]_69 chr1:59214654-59215154 0.00028 78_[-3]_13 chr5:168086173-168086673 0.00028 19_[-3]_72 chr7:70044111-70044611 0.00028 80_[-3]_11 chr4:119730150-119730650 0.00028 37_[-3]_54 chr5:17314975-17315475 0.00028 71_[+3]_20 chr1:64514088-64514588 0.00028 53_[+3]_38 chr10:44589327-44589827 0.00028 6_[-3]_85 chr2:109213979-109214479 0.00028 14_[+3]_77 chr6:24960914-24961414 0.00028 34_[+3]_57 chr2:48279284-48279784 0.00028 40_[+3]_51 chr5:14131880-14132380 0.00028 9_[+3]_82 chr12:53321361-53321861 0.0003 53_[+3]_38 chr6:54879185-54879685 0.0003 20_[-3]_71 chr3:157913589-157914089 0.0003 16_[-3]_75 chr14:96574768-96575268 0.0003 26_[-3]_65 chr5:122493267-122493767 0.0003 23_[+3]_68 chr22:39748882-39749382 0.0003 19_[-3]_72 chr20:20603321-20603821 0.0003 44_[-3]_47 chr1:220918459-220918959 0.0003 53_[+3]_38 chr1:198162202-198162702 0.0003 [+3]_91 chr12:54359104-54359604 0.00032 52_[+3]_39 chr14:24463692-24464192 0.00032 57_[+3]_34 chr6:116933393-116933893 0.00032 36_[+3]_55 chr5:77853486-77853986 0.00034 71_[+3]_20 chr10:101767495-10176799 0.00034 86_[-3]_5 chr8:119721959-119722459 0.00034 50_[+3]_41 chr20:51934168-51934668 0.00034 80_[+3]_11 chr10:75379172-75379672 0.00037 19_[-3]_72 chr1:210236274-210236774 0.00037 35_[-3]_56 chr3:9142302-9142802 0.00037 85_[-3]_6 chr14:50599981-50600481 0.00037 8_[+3]_83 chr15:57090365-57090865 0.00039 18_[+3]_73 chr9:86141719-86142219 0.00039 33_[+3]_58 chr7:114653365-114653865 0.00039 41_[+3]_50 chr3:152328780-152329280 0.00039 80_[-3]_11 chr9:125883545-125884045 0.00043 21_[+3]_70 chr13:78618384-78618884 0.00043 35_[+3]_56 chr6:38975547-38976047 0.00043 47_[-3]_44 chr10:7302358-7302858 0.00043 21_[+3]_70 chr9:85743177-85743677 0.00043 4_[+3]_87 chr5:59303192-59303692 0.00047 10_[-3]_81 chr7:135716607-135717107 0.00047 34_[+3]_57 chr6:124822020-124822520 0.00047 3_[+3]_88 chr5:126015235-126015735 0.00047 52_[+3]_39 chrX:24146367-24146867 0.00047 34_[-3]_57 chr6:21753699-21754199 0.00047 45_[-3]_46 chr12:43193039-43193539 0.00047 57_[-3]_34 chr2:216750784-216751284 0.00047 23_[+3]_68 chr7:96621914-96622414 0.00049 22_[-3]_69 chr14:96888565-96889065 0.00051 48_[-3]_43 chr6:16849427-16849927 0.00051 2_[-3]_89 chr9:87140669-87141169 0.00051 79_[+3]_12 chr1:46719588-46720088 0.00051 74_[+3]_17 chr20:20215877-20216377 0.00051 63_[+3]_28 chr18:58143306-58143806 0.00051 47_[-3]_44 chr5:54310302-54310802 0.00056 76_[+3]_15 chr6:21749737-21750237 0.00058 32_[-3]_59 chr16:53849954-53850454 0.00058 13_[-3]_78 chr18:59053320-59053820 0.00061 91_[+3] chr12:109695992-10969649 0.00061 18_[-3]_73 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAAWGGCWV MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF AAAWGGCWV width=9 seqs=214 chr4:128393244-128393744 ( 77) AAATGGCAG 1 chr1:26692774-26693274 ( 31) AAATGGCAG 1 chr5:92552210-92552710 ( 17) AAATGGCAG 1 chr11:78030450-78030950 ( 53) AAATGGCAG 1 chr6:32983028-32983528 ( 20) AAATGGCAG 1 chr6:2021683-2022183 ( 10) AAATGGCAG 1 chr5:124274321-124274821 ( 47) AAATGGCAG 1 chr17:1252246-1252746 ( 23) AAATGGCTG 1 chr3:182697545-182698045 ( 63) AAATGGCTG 1 chr12:19575763-19576263 ( 1) AAATGGCTG 1 chr1:46643342-46643842 ( 48) AAATGGCAC 1 chr10:125708920-12570942 ( 80) AAAAGGCAG 1 chr10:75358946-75359446 ( 32) AAAAGGCAG 1 chr10:35195681-35196181 ( 79) AAAAGGCAG 1 chr1:26698144-26698644 ( 72) AAAAGGCAG 1 chr7:27139689-27140189 ( 73) AAAAGGCAG 1 chr12:1605448-1605948 ( 77) AAATGGCAC 1 chr17:76716680-76717180 ( 47) AAAAGGCAG 1 chr1:76294417-76294917 ( 24) AAAAGGCAG 1 chr22:38924269-38924769 ( 65) AAATGGCAC 1 chr2:11830150-11830650 ( 70) AAAAGGCAG 1 chr5:124742105-124742605 ( 84) AAATGGCTC 1 chr15:69855589-69856089 ( 34) AAAAGGCTG 1 chr13:28336014-28336514 ( 34) AAAAGGCTG 1 chr1:167658715-167659215 ( 56) AAAAGGCTG 1 chr6:165674339-165674839 ( 56) AAATGGCTC 1 chr6:45416625-45417125 ( 26) AAAAGGCTG 1 chr3:138082484-138082984 ( 87) AAAAGGCTG 1 chr7:27139889-27140389 ( 7) AAATGGCTC 1 chr2:144430814-144431314 ( 87) AAAAGGCTG 1 chr9:13979392-13979892 ( 75) AAATGGCAA 1 chr1:231106268-231106768 ( 56) AAATGGCAA 1 chr6:15504743-15505243 ( 66) AAATGGCAA 1 chr20:18428715-18429215 ( 52) AAATGGCAA 1 chr6:26029195-26029695 ( 24) AAATGGCAA 1 chr18:59502469-59502969 ( 32) AAAAGGCAC 1 chr14:54818478-54818978 ( 86) AAATGGCTA 1 chr12:65593199-65593699 ( 7) AAATGGCTA 1 chr5:91022439-91022939 ( 18) AAATGGCTA 1 chr7:81299265-81299765 ( 88) AAAAGGCAC 1 chrX:39705231-39705731 ( 38) AAATGGCTA 1 chr5:34854432-34854932 ( 61) AAAAGGCTC 1 chr12:121202889-12120338 ( 13) AAATGGCCC 1 chr5:78908208-78908708 ( 6) AAAAGGCTC 1 chr19:3971034-3971534 ( 91) AAAAGGCCG 1 chr14:68140343-68140843 ( 68) AAGTGGCAG 1 chr11:7690560-7691060 ( 60) AAATGGCCC 1 chr12:41288138-41288638 ( 81) AAGTGGCAG 1 chr3:125052661-125053161 ( 52) AAATGGCCC 1 chr7:25857505-25858005 ( 19) AAAAGGCCG 1 chr13:46674980-46675480 ( 91) AAAAGGCTC 1 chr15:65832750-65833250 ( 8) AAGTGGCAG 1 chr19:48872959-48873459 ( 25) AAATGGCCC 1 chr7:36303374-36303874 ( 52) AAGTGGCAG 1 chr16:30948115-30948615 ( 58) AAATGGCCC 1 chr6:1630694-1631194 ( 17) AAATGGCCC 1 chr7:69232633-69233133 ( 62) AAATGGCCC 1 chr4:26483984-26484484 ( 35) AAATGGCCC 1 chr16:22232692-22233192 ( 37) AAATGGCCC 1 chr1:228900262-228900762 ( 46) AAAAGGCTC 1 chr1:234544054-234544554 ( 50) AAAAGGCAA 1 chr17:2484846-2485346 ( 47) AAGTGGCTG 1 chr16:73056857-73057357 ( 15) AAAAGGCAA 1 chr17:35729463-35729963 ( 17) AAAAGGCAA 1 chr19:34184800-34185300 ( 68) AAAAGGCAA 1 chr10:33388264-33388764 ( 69) AAAAGGCAA 1 chr14:60630082-60630582 ( 57) AAATGGCCA 1 chr12:62803714-62804214 ( 22) AAATGGCCA 1 chr13:22114718-22115218 ( 25) AAATGGCCA 1 chr15:57217710-57218210 ( 69) AAAAGGCTA 1 chr3:181252560-181253060 ( 8) AAATGGCCA 1 chr3:50671240-50671740 ( 16) AAGTGGCAC 1 chr12:50195808-50196308 ( 40) AAGAGGCAG 1 chr9:20619730-20620230 ( 72) AAGTGGCAC 1 chr2:27771505-27772005 ( 30) AAAAGGCCC 1 chr6:21264232-21264732 ( 62) AAGAGGCTG 1 chr1:80403332-80403832 ( 84) AAATGACAG 1 chr4:139557104-139557604 ( 41) AAGTGGCCG 1 chr1:151013475-151013975 ( 85) AAGAGGCTG 1 chr19:15413530-15414030 ( 72) AAATGACAG 1 chr1:228781078-228781578 ( 78) AAGAGGCTG 1 chr1:8439036-8439536 ( 9) AAAAGGCCA 1 chr5:56112433-56112933 ( 13) AAAAGGCCA 1 chr9:123678529-123679029 ( 87) AAATGACTG 1 chr8:120266326-120266826 ( 91) AAATGGCAT 1 chr1:51284376-51284876 ( 5) AAAAGGCCA 1 chr12:89352733-89353233 ( 78) AAGTGGCAA 1 chr17:71181036-71181536 ( 18) AAATGGCAT 1 chr7:70098013-70098513 ( 77) AAGTGGCAA 1 chr20:53611343-53611843 ( 84) AAGTGGCAA 1 chr13:52804228-52804728 ( 2) AAAAGGCCA 1 chr10:7433148-7433648 ( 82) AAATGACTG 1 chr13:75903926-75904426 ( 81) AAATGGCAT 1 chr11:32890805-32891305 ( 37) AAGTGGCAA 1 chr10:75294724-75295224 ( 52) AACTGGCAG 1 chr2:175807081-175807581 ( 48) AAGTGGCTA 1 chr19:30426010-30426510 ( 43) AAGTGGCTA 1 chr10:122113122-12211362 ( 50) AAGTGGCTA 1 chr6:108684732-108685232 ( 84) AAGTGGCTA 1 chr21:35256454-35256954 ( 70) AAGAGGCAC 1 chr4:140092324-140092824 ( 27) AAGTGGCTA 1 chr18:35583151-35583651 ( 40) AAGAGGCAC 1 chr1:11178286-11178786 ( 17) AACTGGCTG 1 chr18:12520342-12520842 ( 39) AAAAGACAG 1 chr17:2484146-2484646 ( 69) AACTGGCTG 1 chr14:76486237-76486737 ( 2) AAGTGGCCC 1 chr2:224678171-224678671 ( 2) AAAAGACAG 1 chr6:115485330-115485830 ( 25) AAGAGGCTC 1 chr6:13395390-13395890 ( 68) AACTGGCTG 1 chr1:183039928-183040428 ( 66) AAAAGACAG 1 chr21:36567208-36567708 ( 33) AACTGGCTG 1 chr15:33126521-33127021 ( 54) AACTGGCTG 1 chr2:59383379-59383879 ( 46) AAGAGGCTC 1 chr10:117148219-11714871 ( 23) AAGAGGCTC 1 chr22:19287243-19287743 ( 56) AAAAGACTG 1 chr3:181328973-181329473 ( 49) AAGAGGCAA 1 chr8:37380767-37381267 ( 39) AAAAGACTG 1 chr1:182617664-182618164 ( 72) AAATGACTC 1 chr10:80413351-80413851 ( 65) AAATGACTC 1 chr18:32923114-32923614 ( 92) AAAAGGCAT 1 chr10:125707796-12570829 ( 76) AAATGACTC 1 chr6:112232860-112233360 ( 23) AAAAGGCAT 1 chr5:174371583-174372083 ( 12) AAATGACTC 1 chr6:21748614-21749114 ( 29) AAAAGGCAT 1 chr10:75617466-75617966 ( 86) AAAAGACTG 1 chr11:44139544-44140044 ( 79) AAATGACTC 1 chr3:158168014-158168514 ( 59) AAATGACTC 1 chr19:38683967-38684467 ( 35) AAATGACTC 1 chr7:28572460-28572960 ( 30) AAAAGACTG 1 chr14:61558243-61558743 ( 66) AAAAGGCAT 1 chr12:54033463-54033963 ( 48) AAAAGGCTT 1 chr1:225533188-225533688 ( 35) AAATGACAA 1 chr2:160039435-160039935 ( 74) AACTGGCAC 1 chr5:125190731-125191231 ( 3) AAATGGCCT 1 chr15:67548806-67549306 ( 86) AACTGGCAC 1 chr12:26275468-26275968 ( 54) AAAAGGCTT 1 chr5:90296944-90297444 ( 71) AAAAGGCTT 1 chr6:47034841-47035341 ( 69) AAAAGGCTT 1 chr6:93183509-93184009 ( 64) AAATGGCCT 1 chr8:124077231-124077731 ( 26) AAGAGGCTA 1 chr18:22342533-22343033 ( 71) AAGAGGCCC 1 chr10:8225192-8225692 ( 69) AAAAGACAC 1 chr20:25252771-25253271 ( 46) AAAAGACAC 1 chr15:96047446-96047946 ( 35) AAATGACTA 1 chr15:74584727-74585227 ( 21) AAGAGGCCC 1 chr3:48237059-48237559 ( 90) AACAGGCTG 1 chr6:10407653-10408153 ( 77) AAATGACTA 1 chr10:125633455-12563395 ( 66) AAAAGACCG 1 chr1:117148046-117148546 ( 47) AAGTGACAG 1 chr13:74324246-74324746 ( 87) AAAAGACTC 1 chr13:35499026-35499526 ( 12) AAAAGACTC 1 chr6:152572623-152573123 ( 15) AAATGACCC 1 chr14:74140321-74140821 ( 12) AAATGACCC 1 chr11:130103383-13010388 ( 23) AAAAGACCG 1 chr1:59214654-59215154 ( 79) AAAAGGCCT 1 chr5:168086173-168086673 ( 20) AAGTGGCAT 1 chr7:70044111-70044611 ( 81) AAAAGGCCT 1 chr4:119730150-119730650 ( 38) AACTGGCTA 1 chr5:17314975-17315475 ( 72) AAAAGACAA 1 chr1:64514088-64514588 ( 54) AAGAGGCCA 1 chr10:44589327-44589827 ( 7) AAGTGACTG 1 chr2:109213979-109214479 ( 15) AAGTGACTG 1 chr6:24960914-24961414 ( 35) AAAAGACAA 1 chr2:48279284-48279784 ( 41) AAAAGGCCT 1 chr5:14131880-14132380 ( 10) AAGTGACTG 1 chr12:53321361-53321861 ( 54) AAAAGACTA 1 chr6:54879185-54879685 ( 21) AAAAGACTA 1 chr3:157913589-157914089 ( 17) AACTGGCCC 1 chr14:96574768-96575268 ( 27) AACTGGCCC 1 chr5:122493267-122493767 ( 24) AACTGGCCC 1 chr22:39748882-39749382 ( 20) AAGTGGCTT 1 chr20:20603321-20603821 ( 45) AAGTGGCTT 1 chr1:220918459-220918959 ( 54) AACTGGCCC 1 chr1:198162202-198162702 ( 1) AAAAGACTA 1 chr12:54359104-54359604 ( 53) AAGAGACAG 1 chr14:24463692-24464192 ( 58) AACAGGCAA 1 chr6:116933393-116933893 ( 37) AAGAGACAG 1 chr5:77853486-77853986 ( 72) AACAGGCTA 1 chr10:101767495-10176799 ( 87) AACTGGCCA 1 chr8:119721959-119722459 ( 51) AACAGGCTA 1 chr20:51934168-51934668 ( 81) AAGTGACTC 1 chr10:75379172-75379672 ( 20) AAATGACAT 1 chr1:210236274-210236774 ( 36) AAGTGACAA 1 chr3:9142302-9142802 ( 86) AAGTGACAA 1 chr14:50599981-50600481 ( 9) AAAAGACCA 1 chr15:57090365-57090865 ( 19) AACTGACAG 1 chr9:86141719-86142219 ( 34) AAGTGACTA 1 chr7:114653365-114653865 ( 42) AAGAGACAC 1 chr3:152328780-152329280 ( 81) AAGTGACTA 1 chr9:125883545-125884045 ( 22) AAATAGCAG 1 chr13:78618384-78618884 ( 36) AAAAGACAT 1 chr6:38975547-38976047 ( 48) AAATAGCAG 1 chr10:7302358-7302858 ( 22) AACTGGCTT 1 chr9:85743177-85743677 ( 5) AAATAGCAG 1 chr5:59303192-59303692 ( 11) AAATAGCTG 1 chr7:135716607-135717107 ( 35) AAATGACCT 1 chr6:124822020-124822520 ( 4) AACTGACAC 1 chr5:126015235-126015735 ( 53) AAATAGCTG 1 chrX:24146367-24146867 ( 35) AAATAGCTG 1 chr6:21753699-21754199 ( 46) AAATAGCTG 1 chr12:43193039-43193539 ( 58) AAATAGCTG 1 chr2:216750784-216751284 ( 24) AAATAGCTG 1 chr7:96621914-96622414 ( 23) AACAGGCAT 1 chr14:96888565-96889065 ( 49) AAATGTCAG 1 chr6:16849427-16849927 ( 3) AAATGTCAG 1 chr9:87140669-87141169 ( 80) AAATGTCAG 1 chr1:46719588-46720088 ( 75) AAATGTCAG 1 chr20:20215877-20216377 ( 64) AAATGTCAG 1 chr18:58143306-58143806 ( 48) AAATAGCAC 1 chr5:54310302-54310802 ( 77) AAATAGCCG 1 chr6:21749737-21750237 ( 33) AACAGACCG 1 chr16:53849954-53850454 ( 14) AAATAGCAA 1 chr18:59053320-59053820 ( 92) AAATGTCAC 1 chr12:109695992-10969649 ( 19) AAATGTCAC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAAWGGCWV MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 9 n= 55200 bayes= 9.19533 E= 3.4e-022 182 -1439 -1439 -1439 182 -1439 -1439 -1439 125 -101 2 -1439 52 -1439 -1439 107 -234 -1439 212 -1439 -19 -1439 173 -312 -1439 221 -1439 -1439 55 -11 -1439 43 -17 30 77 -134 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAAWGGCWV MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 9 nsites= 214 E= 3.4e-022 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.672897 0.107477 0.219626 0.000000 0.406542 0.000000 0.000000 0.593458 0.056075 0.000000 0.943925 0.000000 0.247664 0.000000 0.719626 0.032710 0.000000 1.000000 0.000000 0.000000 0.415888 0.200935 0.000000 0.383178 0.252336 0.266355 0.369159 0.112150 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAAWGGCWV MEME-3 regular expression -------------------------------------------------------------------------------- AA[AG][TA]G[GA]C[ATC][GCA] -------------------------------------------------------------------------------- Time 974.47 secs. ******************************************************************************** ******************************************************************************** MOTIF CATTGGCTTAGGCAAGGATTTCATGACCAAGAACYCAAAAGCA MEME-4 width = 43 sites = 4 llr = 227 E-value = 5.3e-020 ******************************************************************************** -------------------------------------------------------------------------------- Motif CATTGGCTTAGGCAAGGATTTCATGACCAAGAACYCAAAAGCA MEME-4 Description -------------------------------------------------------------------------------- Simplified A :8:::3:::a:::aa:3a::::a::a::aa:aa:::aaaa::a pos.-specific C a:::::a:::::a::::::::a::::aa:::::a5a:::::a: probability G :3::a8::::aa:::a8:::::::a:::::a:::::::::a:: matrix T ::aa:::aa:::::::::aaa::a::::::::::5:::::::: bits 2.2 * * * *** * * * ** * * * ** 2.0 * * * *** * * * ** * * * ** 1.8 * *** ********** ***************** ******** 1.5 * *** ********** ***************** ******** Relative 1.3 * ******************************** ******** Entropy 1.1 ******************************************* (81.9 bits) 0.9 ******************************************* 0.7 ******************************************* 0.4 ******************************************* 0.2 ******************************************* 0.0 ------------------------------------------- Multilevel CATTGGCTTAGGCAAGGATTTCATGACCAAGAACCCAAAAGCA consensus G A A T sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CATTGGCTTAGGCAAGGATTTCATGACCAAGAACYCAAAAGCA MEME-4 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ------------------------------------------- chr5:59303192-59303692 - 40 1.71e-26 CCCTTCTAGA CATTGGCTTAGGCAAGGATTTCATGACCAAGAACCCAAAAGCA AATGCAATAA chr15:59785957-59786457 + 2 3.97e-26 a cattggcttaggcaaggatttcatgaccaagaactcaaaagca aatccaataa chr1:223518543-223519043 + 13 1.74e-25 cccttccaga cattgacttaggcaaggatttcatgaccaagaactcaaaagca aatgcaataa chr2:156781649-156782149 + 16 2.09e-25 ctcttctaga cgttggcttaggcaagaatttcatgaccaagaacccaaaagca aacacaataa -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CATTGGCTTAGGCAAGGATTTCATGACCAAGAACYCAAAAGCA MEME-4 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr5:59303192-59303692 1.7e-26 39_[-4]_18 chr15:59785957-59786457 4e-26 1_[+4]_56 chr1:223518543-223519043 1.7e-25 12_[+4]_45 chr2:156781649-156782149 2.1e-25 15_[+4]_42 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CATTGGCTTAGGCAAGGATTTCATGACCAAGAACYCAAAAGCA MEME-4 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CATTGGCTTAGGCAAGGATTTCATGACCAAGAACYCAAAAGCA width=43 seqs=4 chr5:59303192-59303692 ( 40) CATTGGCTTAGGCAAGGATTTCATGACCAAGAACCCAAAAGCA 1 chr15:59785957-59786457 ( 2) CATTGGCTTAGGCAAGGATTTCATGACCAAGAACTCAAAAGCA 1 chr1:223518543-223519043 ( 13) CATTGACTTAGGCAAGGATTTCATGACCAAGAACTCAAAAGCA 1 chr2:156781649-156782149 ( 16) CGTTGGCTTAGGCAAGAATTTCATGACCAAGAACCCAAAAGCA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CATTGGCTTAGGCAAGGATTTCATGACCAAGAACYCAAAAGCA MEME-4 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 43 n= 34800 bayes= 12.2385 E= 5.3e-020 -865 220 -865 -865 140 -865 21 -865 -865 -865 -865 182 -865 -865 -865 182 -865 -865 220 -865 -18 -865 179 -865 -865 220 -865 -865 -865 -865 -865 182 -865 -865 -865 182 182 -865 -865 -865 -865 -865 220 -865 -865 -865 220 -865 -865 220 -865 -865 182 -865 -865 -865 182 -865 -865 -865 -865 -865 220 -865 -18 -865 179 -865 182 -865 -865 -865 -865 -865 -865 182 -865 -865 -865 182 -865 -865 -865 182 -865 220 -865 -865 182 -865 -865 -865 -865 -865 -865 182 -865 -865 220 -865 182 -865 -865 -865 -865 220 -865 -865 -865 220 -865 -865 182 -865 -865 -865 182 -865 -865 -865 -865 -865 220 -865 182 -865 -865 -865 182 -865 -865 -865 -865 220 -865 -865 -865 121 -865 82 -865 220 -865 -865 182 -865 -865 -865 182 -865 -865 -865 182 -865 -865 -865 182 -865 -865 -865 -865 -865 220 -865 -865 220 -865 -865 182 -865 -865 -865 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CATTGGCTTAGGCAAGGATTTCATGACCAAGAACYCAAAAGCA MEME-4 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 43 nsites= 4 E= 5.3e-020 0.000000 1.000000 0.000000 0.000000 0.750000 0.000000 0.250000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.250000 0.000000 0.750000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.250000 0.000000 0.750000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.500000 0.000000 0.500000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CATTGGCTTAGGCAAGGATTTCATGACCAAGAACYCAAAAGCA MEME-4 regular expression -------------------------------------------------------------------------------- C[AG]TTG[GA]CTTAGGCAAG[GA]ATTTCATGACCAAGAAC[CT]CAAAAGCA -------------------------------------------------------------------------------- Time 1248.44 secs. ******************************************************************************** ******************************************************************************** MOTIF TTTTATKRSHTB MEME-5 width = 12 sites = 135 llr = 1125 E-value = 1.0e-011 ******************************************************************************** -------------------------------------------------------------------------------- Motif TTTTATKRSHTB MEME-5 Description -------------------------------------------------------------------------------- Simplified A 2::1a::5:211 pos.-specific C 1:::::::4323 probability G ::::::644122 matrix T 7aa9:a411463 bits 2.2 2.0 1.8 ** ** 1.5 ** ** Relative 1.3 ***** Entropy 1.1 ****** (12.0 bits) 0.9 ****** 0.7 ******** 0.4 ********* * 0.2 ********* * 0.0 ------------ Multilevel TTTTATGAGTTT consensus A TGCC C sequence G -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTTATKRSHTB MEME-5 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ------------ chr7:70098013-70098513 - 86 1.03e-06 AAG TTTTATGGCTTC TTGCCACTTG chr16:8676944-8677444 - 87 1.52e-06 GG TTTTATGACTTT GCACTTGTAA chr1:160260947-160261447 + 53 1.52e-06 CTGGTAGGAA TTTTATGACTTT AGTGGTCAGC chr5:175378382-175378882 - 57 1.95e-06 TTCCAAGAGG TTTTATGAGCTG AAAACATAAA chr4:182724330-182724830 + 65 2.33e-06 TCTCATGCAG TTTTATGACCTG CAGACTACAT chr3:4320382-4320882 - 56 2.33e-06 CCTAAACAAC TTTTATGACCTG AGAGACTTTA chr8:28117457-28117957 + 58 2.70e-06 GTCTCTATAT TTTTATGAGATC ATCtggaaaa chr12:806407-806907 + 25 5.37e-06 TAGTTGTGGC TTTTATTAGTTT GTGACCATGG chr10:117148219-11714871 - 55 5.37e-06 TATACCTTAA TTTTATTAGCTT TTTCTGAGAA chr19:40920902-40921402 - 23 6.98e-06 CAATCCTGAT TTTTATGAGGTG GAAGCTGTAC chr15:36925610-36926110 - 83 6.98e-06 TAGCAA TTTTATTACTTT GTCATTAAAC chr1:232793878-232794378 - 64 9.15e-06 TCCATATTGA TTTTATGACATG CAGGACTTCT chr6:39059651-39060151 + 74 9.15e-06 GCAAACATGG TTTTATTGCTTT CTCCATGAAG chr11:131997904-13199840 - 41 9.15e-06 CTGTCAGGAC TTTTATGACCCC GTAAAACCAG chr12:121202889-12120338 + 77 1.14e-05 aacatttctt ttttatgggcta tttgtgtatc chr14:91284843-91285343 - 9 1.36e-05 CAGAGTGAAG TTTTATGACTGT GCTGTGGT chr13:21949758-21950258 - 39 1.36e-05 TCCACTTGTA TTTTATTGCTTG TCACAAACCC chr18:59502469-59502969 - 50 1.36e-05 CTGCAATGGA ATTTATGACTTT GTATCTGCTG chr4:26483984-26484484 - 1 1.36e-05 CCTCTGACAA TTTTATGGCCTA chr18:62387214-62387714 + 10 1.36e-05 TAAAATCCT TTTTATGGCTTA CTAAAACCGA chr3:17730365-17730865 - 78 1.75e-05 TTACTCATGA TTTTATGATTTT TGTAGGACTC chr8:37392882-37393382 + 68 1.75e-05 ATTAAATTAG ATTTATGGGCTG CATTACATCA chr7:25857505-25858005 - 69 1.75e-05 ACCATCCAAA TTTTATTGCATC CGCTACAAAG chr6:32983028-32983528 + 35 1.75e-05 ATTTACTGCC TTTTATTGCGTC CATAGGAAGC chr19:38683967-38684467 - 78 1.75e-05 CAAGAGGCAT TTTTATGACTGG GTGGGGCATA chr15:96047446-96047946 - 77 1.96e-05 TTAGCTGCAC TTTTATTACGTT TGACAGCGAT chr1:151980342-151980842 - 46 1.96e-05 TAAAAATGGT ATTTATGGCTTG AAATCCCACA chr10:22552858-22553358 - 1 2.31e-05 GTGTCCAGAG TTTTATGAGGTA chrX:136057544-136058044 + 67 2.31e-05 CAATAAAAAG TTTTATTAGGTG TTGTCACAGA chr11:46948368-46948868 + 63 2.81e-05 AGTGAGCTGC TTTTATTGGCCC TGCTGCTTTG chr3:16482919-16483419 - 41 2.81e-05 TTAATGAGGT ATTTATTACCTC TCTGTAAATA chr10:44747561-44748061 + 39 2.81e-05 aataaaagTA TTTTATtggtgc aggatttttc chr1:81032860-81033360 + 23 2.81e-05 AAAACAGCAC TTTTATTACATG ATATCACCAG chr6:21748614-21749114 - 89 2.81e-05 . TTTTATGGTCTG TCAATATCAA chr8:37547850-37548350 - 59 2.81e-05 ATTATGGCAC TTTTATGGCAGC TTTGAAGCTA chr2:111185599-111186099 + 62 2.81e-05 TAAGCTTGGG TTTTATGTCTTT AGGAGCAAAC chr12:109695992-10969649 - 87 2.81e-05 GC TTTTATGAGGGT TATTTATAAA chr10:35890239-35890739 + 12 2.81e-05 ACCCTCTCAT TTTTATGAGGGT TCCCGGGGTA chr9:13979392-13979892 + 1 3.36e-05 . CTTTATGGCCTC TTTTATGCTA chr1:225533188-225533688 + 46 3.36e-05 AATGACAATA TTTTATGAGCAT CATGTGGTGG chr4:23818106-23818606 + 74 3.36e-05 ACTATAGCTT TTTTATTGCCGC CTATTTTCTT chr3:194134847-194135347 - 52 3.36e-05 TGCCAGGATG TTTTATTGCCGC CGCGGCTGCG chr8:124077231-124077731 + 38 3.36e-05 GCCTCTTACA TTTTATTGCTCC TGAGGAAATG chr13:37046880-37047380 + 23 3.90e-05 CAAGCTCACT TTTTATTACTGT ACTTGAATTT chr16:73056857-73057357 - 71 3.90e-05 ATATGACAAT TTTTATTGGTCT CAATTATTGA chr3:42819859-42820359 - 45 3.90e-05 TGTCAACTAC ATTTATGAGTCC TCAATTTATT chr11:44139544-44140044 + 36 3.90e-05 CTGCCCTTTT CTTTATGGGCTT CTTTGGCTCT chr2:11830150-11830650 + 26 3.90e-05 CTGCATTGCT TTTAATGAGTTT TGCAAGCAAG chr17:45345422-45345922 + 40 3.90e-05 ctcaaagtaa atttatgaggtg ttgacaagta chr1:198162202-198162702 + 40 3.90e-05 TCATTGCCTA CTTTATGACCTT GGTTGAGTTG chr4:110904573-110905073 + 26 4.47e-05 ACATGCGTAT CTTTATGGCTTT CTCCTGTCAC chr6:112231713-112232213 + 22 4.47e-05 CTGTCATGTG TTTTATGAGTCA AATTTTATGA chr5:59124038-59124538 - 61 4.47e-05 CAGCAAGACT TTTTATGTGATC TTGACCAAAC chr19:30426010-30426510 - 10 4.47e-05 ACAGCAGATA TTTTATTGCCGT TAAAGTCAG chr13:74324246-74324746 + 18 5.07e-05 AAGGCAAGAT TTTTATGGGCCA AGTGCTGTTT chr17:1252246-1252746 + 59 5.07e-05 TAAGTGAGCA ATTTATGAGTCT AACAGTCGTT chr12:62803714-62804214 - 9 5.07e-05 TGGCCATTTA TTTTATGTCATC TTTGATGA chr1:76294417-76294917 - 46 5.07e-05 CTTTTCTGAC ATTTATGAGTGT CTTTTCTGCT chr5:91022439-91022939 - 39 5.07e-05 CACTTGAAAG ATTTATGAGCCT GTAAATGGGT chr10:44752630-44753130 + 45 5.61e-05 AGGGTATGTT TTTAATGGGTTG GTAGAAAACA chr15:40092272-40092772 - 80 5.61e-05 AGAGGGATT ATTTATGGCTTA CTGTCAAGAG chr18:12520342-12520842 - 85 6.22e-05 TCGT TTTAATGAGATC ATTCATCATT chr14:89857004-89857504 - 7 6.22e-05 CTTAGTTGAT TTTTATTATTTG TGGTTG chr9:125883545-125884045 - 56 6.22e-05 AGCCACATGG TTTTATTAGTAC TATAAATGCT chr1:231106268-231106768 + 8 6.22e-05 GCAGCTT TTTAATGAGGTC ATTCCAGAGT chr1:26698144-26698644 - 8 6.22e-05 GAGTGTAAAA GTTTATGAGCTC ATCAGGA chr15:69143656-69144156 - 46 6.22e-05 GTCGTGAGGA TTTAATGAGATC AAGCCTATAA chr3:186105549-186106049 - 79 6.22e-05 AGCAAGTCCC TTTTATGGTCCC AGGGGTAAGT chr7:114653365-114653865 + 64 6.22e-05 GGGCCTTCTA ATTTATGGTTTC AGTAACTTGT chr6:90895447-90895947 - 81 6.22e-05 ATGGACAA ATTTATGGCTCT TTAGATACTG chr14:50599981-50600481 - 24 6.22e-05 CTCTCATCTG TTTTATTGGAGC ATTGATTGGT chr6:2028542-2029042 + 65 7.01e-05 TTATGAAATG ATTTATGTGTTC ATAATAGAGG chr14:76486237-76486737 + 33 7.01e-05 TTACATCTCC CTTTATTACCTC TGCTAATGGC chr13:78618384-78618884 - 2 7.01e-05 AATCTTGAGA TTTTATGATTCT A chr12:50195808-50196308 + 58 7.01e-05 GCAAAATGTC TTTTATGAGGAT ATTAACATGC chr6:18405430-18405930 + 27 7.01e-05 ACAATGCCGA TTTTATTGGCAC TATATTTTTC chr6:38975547-38976047 + 79 7.01e-05 ACAAATAATA TTTTATGATTGT GTTCCCAGTA chr5:34576837-34577337 - 25 7.01e-05 TATAAAGATA GTTTATGGGCTC ATTAAAAATC chr9:125541816-125542316 + 57 7.01e-05 tctctctctT TTTTATGAGAAT CAGATTTTCA chr6:150753371-150753871 + 34 7.82e-05 CCAGGGGTCT GTTTATGGCCTC GTAAATGCTG chr7:133492163-133492663 + 66 7.82e-05 TTATGTATGC TTTTATGGTTCT CTTTTGGTTG chr13:95288998-95289498 - 21 7.82e-05 AATCACTTGC TTTTATTTGCTG ATCTTTATTG chr14:24179957-24180457 + 88 7.82e-05 AACAAGCTGC TTTTATTACAGT A chr3:182697545-182698045 - 79 7.82e-05 TTGGCAGCAG TTTTATTTGTTG TGCTATAAAA chr7:112150768-112151268 - 64 8.73e-05 AAGTCACTTA TTTTATGTGTGT TGTGCTTAGT chr10:75613688-75614188 - 66 8.73e-05 TGTTTGGATG ATTTATTAGGTG CAGAAAGCAT chr1:3403749-3404249 - 58 8.73e-05 GTTAATTGTG ATTTATGTGTTT ATGTAAAGAA chr6:15504743-15505243 + 48 8.73e-05 CTATTTTTTA TTTAATGGGATT GGCAGATTGC chr10:125633455-12563395 + 16 9.94e-05 tCTGATTCTT TTTTATGAGCAA TGAAATTTGA chr1:52955618-52956118 + 47 9.94e-05 ccaaaactag atttattggatg cagatttaac chr16:53611140-53611640 + 20 9.94e-05 AGTCAACGGT CTTTATTGCTTT GTATTTGAGG chr11:92838914-92839414 + 16 9.94e-05 CAACATTCAG TTTTATGACACA CATCAATCAG chr10:33388264-33388764 + 78 9.94e-05 GAAAAGGCAA CTTTATTGCTTT CTTGCAAACA chr18:59053320-59053820 + 47 9.94e-05 tatctaccat ttttatggttgg gtatctagat chr5:124274321-124274821 - 5 9.94e-05 GTGAAGTAGG TTTTATTAGTAG TTTT chr8:37302602-37303102 - 17 1.11e-04 CATTCTAATG ATTTATTGCATG TTCCAGTTGA chr17:70969487-70969987 + 26 1.11e-04 TCTGCATACT GTTTATGGGTTG CTTGCTGCTT chr13:46674980-46675480 - 75 1.11e-04 AGGCTCTCAA TTTTATTGTGTT CTAACAGTGT chr2:205280652-205281152 + 71 1.11e-04 TATTGATTCC TTTTATTACTAG CAGCCGTTTA chr10:44589327-44589827 - 36 1.11e-04 GCAATGAAGG TTTTATGATAGC CCATAATCTC chr12:82861968-82862468 - 87 1.11e-04 GA TTTTATTACCCA TGTACTTCCT chr6:108684732-108685232 + 57 1.11e-04 ATAAAGGAAG ATTTATGGCATA GTTCATGGTG chr18:35583151-35583651 + 12 1.11e-04 GATAACTGCG TTTAATGACTGC TCTGCTGGTT chr1:184930572-184931072 - 76 1.22e-04 ATGGCTCTGG TTTTATGATGTA CACTAATGTG chr12:64665902-64666402 + 17 1.22e-04 TTTGTGCTTA ATTTATTGCCTA TTGCTCATAT chr1:113991392-113991892 + 36 1.22e-04 ATAAATTGTG ATTTATGTCCTG TGGGTTTTTA chr8:28445302-28445802 + 89 1.22e-04 ATTTTTCTCA ATTAATGGCTTC chr13:39385766-39386266 + 55 1.22e-04 TCAATTCATC TTTTATGTTTTT TGGATACTTT chr13:106096577-10609707 + 1 1.22e-04 . TTTTATGGTACC TATTTCCTGG chr8:37637907-37638407 - 59 1.33e-04 TCATATCACC TTTAATGGGCGT GCATTTCTGC chr12:114656063-11465656 - 34 1.33e-04 GTTCTTATTT ATTTATTGCTGT TGCTCACGCC chr1:117148046-117148546 + 29 1.33e-04 ATCCTATCTC TTTTATTTCatt tcagctctgt chr2:175807081-175807581 + 2 1.33e-04 T TTTAATGACTGT GGGCTGCTGA chr5:67015541-67016041 + 58 1.33e-04 TGGAGGGGCT ATTTATGAGTCA TGCATCTCTC chr15:59785957-59786457 - 75 1.33e-04 AGCTCTTTAG TTTAATTAGGTC CCAGCTGTTT chr1:223518543-223519043 - 86 1.33e-04 TAG TTTAATTAGGTC CCAGCTGTTT chr2:156781649-156782149 - 89 1.33e-04 . TTTAATTAGGTC CCAGGTATTT chr12:43193039-43193539 + 45 1.33e-04 agctctttag tttaattaggtc ccagctattt chr2:216750784-216751284 - 34 1.33e-04 AGCTCTTTAG TTTAATTAGGTC CCAGCTATTT chr1:61091467-61091967 + 1 1.44e-04 . ATTTATGACCAG TCTTTACCAG chr6:124076455-124076955 + 39 1.44e-04 ACTTGTTCTT GTTTATGAGATT GTTCACATGA chr7:83267166-83267666 + 65 1.55e-04 ATTCTTCCCA TTTTATTTCCCC TCATTTGCTT chr15:81950810-81951310 - 18 1.69e-04 TTCAAAACAG CTTTATGAGATA GGCCTCATTA chr5:17305873-17306373 - 72 1.69e-04 GGAATCTCTA ATTTATTTGTTT AACACGCAAC chr13:75903926-75904426 + 14 1.69e-04 ATCCTATCTT CTTTATGAGGTA TCTTATCTGG chr12:114914172-11491467 + 69 1.69e-04 ATTTGATCTC TTTTATGATCCA GTGAGTCATA chr11:19519961-19520461 + 43 1.69e-04 CCTCTAATCC TTTTATTGCGAT GCACTCATAA chr15:96694000-96694500 - 13 1.86e-04 CTATAAAGAT ATTAATTAGCTC CAGTTGTCAC chr2:24540035-24540535 + 51 2.04e-04 CAGATAGGGA ATTTATTATATC CTTaacaaaa chr10:129606036-12960653 + 64 2.04e-04 CCTGTTTATA CTTAATGACCTC AAAATTTGTA chr20:51934168-51934668 + 36 2.20e-04 GGCTGAAGGT TTTTATTATCAC ATCGTAAATG chr9:95721042-95721542 - 77 2.70e-04 CCTCCAAATG TTTTATGATACA GTTAAATGGA chr1:3402115-3402615 + 74 2.70e-04 GACGACAATA ATTTATTATATG CACTGGAGCT chr21:36567208-36567708 + 42 3.69e-04 GAACTGGCTG ATTTATGTCTAT TCACATATTC chr9:127388345-127388845 + 41 3.91e-04 CATCACTCAT CTTTATTGCACG CAGTTAAGAT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTTATKRSHTB MEME-5 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr7:70098013-70098513 1e-06 85_[-5]_3 chr16:8676944-8677444 1.5e-06 86_[-5]_2 chr1:160260947-160261447 1.5e-06 52_[+5]_36 chr5:175378382-175378882 2e-06 56_[-5]_32 chr4:182724330-182724830 2.3e-06 64_[+5]_24 chr3:4320382-4320882 2.3e-06 55_[-5]_33 chr8:28117457-28117957 2.7e-06 57_[+5]_31 chr12:806407-806907 5.4e-06 24_[+5]_64 chr10:117148219-11714871 5.4e-06 54_[-5]_34 chr19:40920902-40921402 7e-06 22_[-5]_66 chr15:36925610-36926110 7e-06 82_[-5]_6 chr1:232793878-232794378 9.1e-06 63_[-5]_25 chr6:39059651-39060151 9.1e-06 73_[+5]_15 chr11:131997904-13199840 9.1e-06 40_[-5]_48 chr12:121202889-12120338 1.1e-05 76_[+5]_12 chr14:91284843-91285343 1.4e-05 8_[-5]_80 chr13:21949758-21950258 1.4e-05 38_[-5]_50 chr18:59502469-59502969 1.4e-05 49_[-5]_39 chr4:26483984-26484484 1.4e-05 [-5]_88 chr18:62387214-62387714 1.4e-05 9_[+5]_79 chr3:17730365-17730865 1.8e-05 77_[-5]_11 chr8:37392882-37393382 1.8e-05 67_[+5]_21 chr7:25857505-25858005 1.8e-05 68_[-5]_20 chr6:32983028-32983528 1.8e-05 34_[+5]_54 chr19:38683967-38684467 1.8e-05 77_[-5]_11 chr15:96047446-96047946 2e-05 76_[-5]_12 chr1:151980342-151980842 2e-05 45_[-5]_43 chr10:22552858-22553358 2.3e-05 [-5]_88 chrX:136057544-136058044 2.3e-05 66_[+5]_22 chr11:46948368-46948868 2.8e-05 62_[+5]_26 chr3:16482919-16483419 2.8e-05 40_[-5]_48 chr10:44747561-44748061 2.8e-05 38_[+5]_50 chr1:81032860-81033360 2.8e-05 22_[+5]_66 chr6:21748614-21749114 2.8e-05 88_[-5] chr8:37547850-37548350 2.8e-05 58_[-5]_30 chr2:111185599-111186099 2.8e-05 61_[+5]_27 chr12:109695992-10969649 2.8e-05 86_[-5]_2 chr10:35890239-35890739 2.8e-05 11_[+5]_77 chr9:13979392-13979892 3.4e-05 [+5]_88 chr1:225533188-225533688 3.4e-05 45_[+5]_43 chr4:23818106-23818606 3.4e-05 73_[+5]_15 chr3:194134847-194135347 3.4e-05 51_[-5]_37 chr8:124077231-124077731 3.4e-05 37_[+5]_51 chr13:37046880-37047380 3.9e-05 22_[+5]_66 chr16:73056857-73057357 3.9e-05 70_[-5]_18 chr3:42819859-42820359 3.9e-05 44_[-5]_44 chr11:44139544-44140044 3.9e-05 35_[+5]_53 chr2:11830150-11830650 3.9e-05 25_[+5]_63 chr17:45345422-45345922 3.9e-05 39_[+5]_49 chr1:198162202-198162702 3.9e-05 39_[+5]_49 chr4:110904573-110905073 4.5e-05 25_[+5]_63 chr6:112231713-112232213 4.5e-05 21_[+5]_67 chr5:59124038-59124538 4.5e-05 60_[-5]_28 chr19:30426010-30426510 4.5e-05 9_[-5]_79 chr13:74324246-74324746 5.1e-05 17_[+5]_71 chr17:1252246-1252746 5.1e-05 58_[+5]_30 chr12:62803714-62804214 5.1e-05 8_[-5]_80 chr1:76294417-76294917 5.1e-05 45_[-5]_43 chr5:91022439-91022939 5.1e-05 38_[-5]_50 chr10:44752630-44753130 5.6e-05 44_[+5]_44 chr15:40092272-40092772 5.6e-05 79_[-5]_9 chr18:12520342-12520842 6.2e-05 84_[-5]_4 chr14:89857004-89857504 6.2e-05 6_[-5]_82 chr9:125883545-125884045 6.2e-05 55_[-5]_33 chr1:231106268-231106768 6.2e-05 7_[+5]_81 chr1:26698144-26698644 6.2e-05 7_[-5]_81 chr15:69143656-69144156 6.2e-05 45_[-5]_43 chr3:186105549-186106049 6.2e-05 78_[-5]_10 chr7:114653365-114653865 6.2e-05 63_[+5]_25 chr6:90895447-90895947 6.2e-05 80_[-5]_8 chr14:50599981-50600481 6.2e-05 23_[-5]_65 chr6:2028542-2029042 7e-05 64_[+5]_24 chr14:76486237-76486737 7e-05 32_[+5]_56 chr13:78618384-78618884 7e-05 1_[-5]_87 chr12:50195808-50196308 7e-05 57_[+5]_31 chr6:18405430-18405930 7e-05 26_[+5]_62 chr6:38975547-38976047 7e-05 78_[+5]_10 chr5:34576837-34577337 7e-05 24_[-5]_64 chr9:125541816-125542316 7e-05 56_[+5]_32 chr6:150753371-150753871 7.8e-05 33_[+5]_55 chr7:133492163-133492663 7.8e-05 65_[+5]_23 chr13:95288998-95289498 7.8e-05 20_[-5]_68 chr14:24179957-24180457 7.8e-05 87_[+5]_1 chr3:182697545-182698045 7.8e-05 78_[-5]_10 chr7:112150768-112151268 8.7e-05 63_[-5]_25 chr10:75613688-75614188 8.7e-05 65_[-5]_23 chr1:3403749-3404249 8.7e-05 57_[-5]_31 chr6:15504743-15505243 8.7e-05 47_[+5]_41 chr10:125633455-12563395 9.9e-05 15_[+5]_73 chr1:52955618-52956118 9.9e-05 46_[+5]_42 chr16:53611140-53611640 9.9e-05 19_[+5]_69 chr11:92838914-92839414 9.9e-05 15_[+5]_73 chr10:33388264-33388764 9.9e-05 77_[+5]_11 chr18:59053320-59053820 9.9e-05 46_[+5]_42 chr5:124274321-124274821 9.9e-05 4_[-5]_84 chr8:37302602-37303102 0.00011 16_[-5]_72 chr17:70969487-70969987 0.00011 25_[+5]_63 chr13:46674980-46675480 0.00011 74_[-5]_14 chr2:205280652-205281152 0.00011 70_[+5]_18 chr10:44589327-44589827 0.00011 35_[-5]_53 chr12:82861968-82862468 0.00011 86_[-5]_2 chr6:108684732-108685232 0.00011 56_[+5]_32 chr18:35583151-35583651 0.00011 11_[+5]_77 chr1:184930572-184931072 0.00012 75_[-5]_13 chr12:64665902-64666402 0.00012 16_[+5]_72 chr1:113991392-113991892 0.00012 35_[+5]_53 chr8:28445302-28445802 0.00012 88_[+5] chr13:39385766-39386266 0.00012 54_[+5]_34 chr13:106096577-10609707 0.00012 [+5]_88 chr8:37637907-37638407 0.00013 58_[-5]_30 chr12:114656063-11465656 0.00013 33_[-5]_55 chr1:117148046-117148546 0.00013 28_[+5]_60 chr2:175807081-175807581 0.00013 1_[+5]_87 chr5:67015541-67016041 0.00013 57_[+5]_31 chr15:59785957-59786457 0.00013 74_[-5]_14 chr1:223518543-223519043 0.00013 85_[-5]_3 chr2:156781649-156782149 0.00013 88_[-5] chr12:43193039-43193539 0.00013 44_[+5]_44 chr2:216750784-216751284 0.00013 33_[-5]_55 chr1:61091467-61091967 0.00014 [+5]_88 chr6:124076455-124076955 0.00014 38_[+5]_50 chr7:83267166-83267666 0.00016 64_[+5]_24 chr15:81950810-81951310 0.00017 17_[-5]_71 chr5:17305873-17306373 0.00017 71_[-5]_17 chr13:75903926-75904426 0.00017 13_[+5]_75 chr12:114914172-11491467 0.00017 68_[+5]_20 chr11:19519961-19520461 0.00017 42_[+5]_46 chr15:96694000-96694500 0.00019 12_[-5]_76 chr2:24540035-24540535 0.0002 50_[+5]_38 chr10:129606036-12960653 0.0002 63_[+5]_25 chr20:51934168-51934668 0.00022 35_[+5]_53 chr9:95721042-95721542 0.00027 76_[-5]_12 chr1:3402115-3402615 0.00027 73_[+5]_15 chr21:36567208-36567708 0.00037 41_[+5]_47 chr9:127388345-127388845 0.00039 40_[+5]_48 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTTATKRSHTB MEME-5 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TTTTATKRSHTB width=12 seqs=135 chr7:70098013-70098513 ( 86) TTTTATGGCTTC 1 chr16:8676944-8677444 ( 87) TTTTATGACTTT 1 chr1:160260947-160261447 ( 53) TTTTATGACTTT 1 chr5:175378382-175378882 ( 57) TTTTATGAGCTG 1 chr4:182724330-182724830 ( 65) TTTTATGACCTG 1 chr3:4320382-4320882 ( 56) TTTTATGACCTG 1 chr8:28117457-28117957 ( 58) TTTTATGAGATC 1 chr12:806407-806907 ( 25) TTTTATTAGTTT 1 chr10:117148219-11714871 ( 55) TTTTATTAGCTT 1 chr19:40920902-40921402 ( 23) TTTTATGAGGTG 1 chr15:36925610-36926110 ( 83) TTTTATTACTTT 1 chr1:232793878-232794378 ( 64) TTTTATGACATG 1 chr6:39059651-39060151 ( 74) TTTTATTGCTTT 1 chr11:131997904-13199840 ( 41) TTTTATGACCCC 1 chr12:121202889-12120338 ( 77) TTTTATGGGCTA 1 chr14:91284843-91285343 ( 9) TTTTATGACTGT 1 chr13:21949758-21950258 ( 39) TTTTATTGCTTG 1 chr18:59502469-59502969 ( 50) ATTTATGACTTT 1 chr4:26483984-26484484 ( 1) TTTTATGGCCTA 1 chr18:62387214-62387714 ( 10) TTTTATGGCTTA 1 chr3:17730365-17730865 ( 78) TTTTATGATTTT 1 chr8:37392882-37393382 ( 68) ATTTATGGGCTG 1 chr7:25857505-25858005 ( 69) TTTTATTGCATC 1 chr6:32983028-32983528 ( 35) TTTTATTGCGTC 1 chr19:38683967-38684467 ( 78) TTTTATGACTGG 1 chr15:96047446-96047946 ( 77) TTTTATTACGTT 1 chr1:151980342-151980842 ( 46) ATTTATGGCTTG 1 chr10:22552858-22553358 ( 1) TTTTATGAGGTA 1 chrX:136057544-136058044 ( 67) TTTTATTAGGTG 1 chr11:46948368-46948868 ( 63) TTTTATTGGCCC 1 chr3:16482919-16483419 ( 41) ATTTATTACCTC 1 chr10:44747561-44748061 ( 39) TTTTATTGGTGC 1 chr1:81032860-81033360 ( 23) TTTTATTACATG 1 chr6:21748614-21749114 ( 89) TTTTATGGTCTG 1 chr8:37547850-37548350 ( 59) TTTTATGGCAGC 1 chr2:111185599-111186099 ( 62) TTTTATGTCTTT 1 chr12:109695992-10969649 ( 87) TTTTATGAGGGT 1 chr10:35890239-35890739 ( 12) TTTTATGAGGGT 1 chr9:13979392-13979892 ( 1) CTTTATGGCCTC 1 chr1:225533188-225533688 ( 46) TTTTATGAGCAT 1 chr4:23818106-23818606 ( 74) TTTTATTGCCGC 1 chr3:194134847-194135347 ( 52) TTTTATTGCCGC 1 chr8:124077231-124077731 ( 38) TTTTATTGCTCC 1 chr13:37046880-37047380 ( 23) TTTTATTACTGT 1 chr16:73056857-73057357 ( 71) TTTTATTGGTCT 1 chr3:42819859-42820359 ( 45) ATTTATGAGTCC 1 chr11:44139544-44140044 ( 36) CTTTATGGGCTT 1 chr2:11830150-11830650 ( 26) TTTAATGAGTTT 1 chr17:45345422-45345922 ( 40) ATTTATGAGGTG 1 chr1:198162202-198162702 ( 40) CTTTATGACCTT 1 chr4:110904573-110905073 ( 26) CTTTATGGCTTT 1 chr6:112231713-112232213 ( 22) TTTTATGAGTCA 1 chr5:59124038-59124538 ( 61) TTTTATGTGATC 1 chr19:30426010-30426510 ( 10) TTTTATTGCCGT 1 chr13:74324246-74324746 ( 18) TTTTATGGGCCA 1 chr17:1252246-1252746 ( 59) ATTTATGAGTCT 1 chr12:62803714-62804214 ( 9) TTTTATGTCATC 1 chr1:76294417-76294917 ( 46) ATTTATGAGTGT 1 chr5:91022439-91022939 ( 39) ATTTATGAGCCT 1 chr10:44752630-44753130 ( 45) TTTAATGGGTTG 1 chr15:40092272-40092772 ( 80) ATTTATGGCTTA 1 chr18:12520342-12520842 ( 85) TTTAATGAGATC 1 chr14:89857004-89857504 ( 7) TTTTATTATTTG 1 chr9:125883545-125884045 ( 56) TTTTATTAGTAC 1 chr1:231106268-231106768 ( 8) TTTAATGAGGTC 1 chr1:26698144-26698644 ( 8) GTTTATGAGCTC 1 chr15:69143656-69144156 ( 46) TTTAATGAGATC 1 chr3:186105549-186106049 ( 79) TTTTATGGTCCC 1 chr7:114653365-114653865 ( 64) ATTTATGGTTTC 1 chr6:90895447-90895947 ( 81) ATTTATGGCTCT 1 chr14:50599981-50600481 ( 24) TTTTATTGGAGC 1 chr6:2028542-2029042 ( 65) ATTTATGTGTTC 1 chr14:76486237-76486737 ( 33) CTTTATTACCTC 1 chr13:78618384-78618884 ( 2) TTTTATGATTCT 1 chr12:50195808-50196308 ( 58) TTTTATGAGGAT 1 chr6:18405430-18405930 ( 27) TTTTATTGGCAC 1 chr6:38975547-38976047 ( 79) TTTTATGATTGT 1 chr5:34576837-34577337 ( 25) GTTTATGGGCTC 1 chr9:125541816-125542316 ( 57) TTTTATGAGAAT 1 chr6:150753371-150753871 ( 34) GTTTATGGCCTC 1 chr7:133492163-133492663 ( 66) TTTTATGGTTCT 1 chr13:95288998-95289498 ( 21) TTTTATTTGCTG 1 chr14:24179957-24180457 ( 88) TTTTATTACAGT 1 chr3:182697545-182698045 ( 79) TTTTATTTGTTG 1 chr7:112150768-112151268 ( 64) TTTTATGTGTGT 1 chr10:75613688-75614188 ( 66) ATTTATTAGGTG 1 chr1:3403749-3404249 ( 58) ATTTATGTGTTT 1 chr6:15504743-15505243 ( 48) TTTAATGGGATT 1 chr10:125633455-12563395 ( 16) TTTTATGAGCAA 1 chr1:52955618-52956118 ( 47) ATTTATTGGATG 1 chr16:53611140-53611640 ( 20) CTTTATTGCTTT 1 chr11:92838914-92839414 ( 16) TTTTATGACACA 1 chr10:33388264-33388764 ( 78) CTTTATTGCTTT 1 chr18:59053320-59053820 ( 47) TTTTATGGTTGG 1 chr5:124274321-124274821 ( 5) TTTTATTAGTAG 1 chr8:37302602-37303102 ( 17) ATTTATTGCATG 1 chr17:70969487-70969987 ( 26) GTTTATGGGTTG 1 chr13:46674980-46675480 ( 75) TTTTATTGTGTT 1 chr2:205280652-205281152 ( 71) TTTTATTACTAG 1 chr10:44589327-44589827 ( 36) TTTTATGATAGC 1 chr12:82861968-82862468 ( 87) TTTTATTACCCA 1 chr6:108684732-108685232 ( 57) ATTTATGGCATA 1 chr18:35583151-35583651 ( 12) TTTAATGACTGC 1 chr1:184930572-184931072 ( 76) TTTTATGATGTA 1 chr12:64665902-64666402 ( 17) ATTTATTGCCTA 1 chr1:113991392-113991892 ( 36) ATTTATGTCCTG 1 chr8:28445302-28445802 ( 89) ATTAATGGCTTC 1 chr13:39385766-39386266 ( 55) TTTTATGTTTTT 1 chr13:106096577-10609707 ( 1) TTTTATGGTACC 1 chr8:37637907-37638407 ( 59) TTTAATGGGCGT 1 chr12:114656063-11465656 ( 34) ATTTATTGCTGT 1 chr1:117148046-117148546 ( 29) TTTTATTTCATT 1 chr2:175807081-175807581 ( 2) TTTAATGACTGT 1 chr5:67015541-67016041 ( 58) ATTTATGAGTCA 1 chr15:59785957-59786457 ( 75) TTTAATTAGGTC 1 chr1:223518543-223519043 ( 86) TTTAATTAGGTC 1 chr2:156781649-156782149 ( 89) TTTAATTAGGTC 1 chr12:43193039-43193539 ( 45) TTTAATTAGGTC 1 chr2:216750784-216751284 ( 34) TTTAATTAGGTC 1 chr1:61091467-61091967 ( 1) ATTTATGACCAG 1 chr6:124076455-124076955 ( 39) GTTTATGAGATT 1 chr7:83267166-83267666 ( 65) TTTTATTTCCCC 1 chr15:81950810-81951310 ( 18) CTTTATGAGATA 1 chr5:17305873-17306373 ( 72) ATTTATTTGTTT 1 chr13:75903926-75904426 ( 14) CTTTATGAGGTA 1 chr12:114914172-11491467 ( 69) TTTTATGATCCA 1 chr11:19519961-19520461 ( 43) TTTTATTGCGAT 1 chr15:96694000-96694500 ( 13) ATTAATTAGCTC 1 chr2:24540035-24540535 ( 51) ATTTATTATATC 1 chr10:129606036-12960653 ( 64) CTTAATGACCTC 1 chr20:51934168-51934668 ( 36) TTTTATTATCAC 1 chr9:95721042-95721542 ( 77) TTTTATGATACA 1 chr1:3402115-3402615 ( 74) ATTTATTATATG 1 chr21:36567208-36567708 ( 42) ATTTATGTCTAT 1 chr9:127388345-127388845 ( 41) CTTTATTGCACG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTTATKRSHTB MEME-5 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 12 n= 53400 bayes= 9.98614 E= 1.0e-011 -40 -141 -255 123 -1372 -1372 -1372 182 -1372 -1372 -1372 182 -117 -1372 -1372 162 182 -1372 -1372 -1372 -1372 -1372 -1372 182 -1372 -1372 151 44 91 -1372 75 -145 -1372 96 101 -101 -56 38 -55 41 -167 -48 -48 108 -109 56 -6 27 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTTATKRSHTB MEME-5 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 12 nsites= 135 E= 1.0e-011 0.214815 0.081481 0.037037 0.666667 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.125926 0.000000 0.000000 0.874074 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.614815 0.385185 0.533333 0.000000 0.362963 0.103704 0.000000 0.422222 0.437037 0.140741 0.192593 0.281481 0.148148 0.377778 0.088889 0.155556 0.155556 0.600000 0.133333 0.318519 0.207407 0.340741 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTTATKRSHTB MEME-5 regular expression -------------------------------------------------------------------------------- [TA]TTTAT[GT][AG][GC][TC]T[TCG] -------------------------------------------------------------------------------- Time 1522.95 secs. ******************************************************************************** ******************************************************************************** MOTIF YTGACAGWTTTA MEME-6 width = 12 sites = 23 llr = 270 E-value = 2.0e+000 ******************************************************************************** -------------------------------------------------------------------------------- Motif YTGACAGWTTTA MEME-6 Description -------------------------------------------------------------------------------- Simplified A 1::9:a:311:9 pos.-specific C 6:::a::1:::1 probability G ::a1::9:::1: matrix T 3a::::15999: bits 2.2 * 2.0 * * 1.8 * ** 1.5 ** *** Relative 1.3 ****** * ** Entropy 1.1 ****** **** (16.9 bits) 0.9 ****** **** 0.7 ******* **** 0.4 ************ 0.2 ************ 0.0 ------------ Multilevel CTGACAGTTTTA consensus T A sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif YTGACAGWTTTA MEME-6 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ------------ chr6:143755268-143755768 + 14 9.21e-08 TAAAAAGTTC CTGACAGTTTTA TATGAATTAA chr10:35195681-35196181 + 32 1.84e-07 TAAAATGCTG CTGACAGATTTA GAGTTAACTA chr16:77409287-77409787 + 50 1.84e-07 ACAGCCAAGG CTGACAGATTTA CAATGGAGAA chr10:72098746-72099246 + 32 1.84e-07 GTCACTAAGA CTGACAGATTTA TAGCTCTGCA chr2:55843193-55843693 - 59 3.05e-07 GCCCCAGATC TTGACAGTTTTA TAGTCCTTGG chr2:109213979-109214479 - 28 4.97e-07 AAACCACATG CTGACAGCTTTA TTTCCAGTCA chr12:54052043-54052543 + 87 9.39e-07 CCTACCACCG CTGGCAGATTTA GT chr17:29642211-29642711 - 58 9.39e-07 ATGCAGGTAT CTGGCAGATTTA TGTTCCATTA chr1:67646210-67646710 + 51 9.39e-07 CAGGCAGCAA CTGACAGATTTC TCAGAGCAGG chr12:106074924-10607542 - 74 1.06e-06 GTCAGTGGCA ATGACAGTTTTA CTGGGAGAGG chr18:59053320-59053820 + 20 1.62e-06 acctgcatac ttggcagtttta GGGtttatct chr9:125894467-125894967 + 26 2.05e-06 TTATTTAATG CTGACAGATATA GCTTGTGGCA chr8:120266326-120266826 + 42 2.50e-06 CACTTTGTAG TTGACAGTTTGA TTTCATTGAC chr7:27139889-27140389 + 64 2.50e-06 GGACCTAAAA TTGACAGTTTGA ATGGCCAGGC chr16:54654449-54654949 - 61 2.73e-06 AATGGGCACG TTGACATTTTTA TTTGAATCTC chr1:224317347-224317847 + 72 3.77e-06 tgaagagcca ctgaaagtttta caagcaggaa chr1:228781078-228781578 - 23 3.77e-06 CCCCAGGGAG TTGACATATTTA ACGAGTAAAG chr6:21953882-21954382 - 85 3.77e-06 GTAC CTGACATCTTTA TAGGATTACA chr12:54033463-54033963 - 34 4.48e-06 AGCCTTTTAG TGGACAGTTTTA CGAGCCATTG chr14:74140321-74140821 - 71 5.35e-06 CACCACCCCT CTGACAGCTGTA GAGTCCTCCG chr4:154030674-154031174 - 42 5.77e-06 CACATCAGAG CTGACAGTTATC TTAAGGTAAA chr9:123678529-123679029 + 16 8.40e-06 TTTCACTTCT ATGACAGTATTA TCACTTATGT chr16:22728335-22728835 + 18 1.01e-05 CTGCTGCCCT TTGACAGTATTC CTGGTAATGG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif YTGACAGWTTTA MEME-6 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr6:143755268-143755768 9.2e-08 13_[+6]_75 chr10:35195681-35196181 1.8e-07 31_[+6]_57 chr16:77409287-77409787 1.8e-07 49_[+6]_39 chr10:72098746-72099246 1.8e-07 31_[+6]_57 chr2:55843193-55843693 3.1e-07 58_[-6]_30 chr2:109213979-109214479 5e-07 27_[-6]_61 chr12:54052043-54052543 9.4e-07 86_[+6]_2 chr17:29642211-29642711 9.4e-07 57_[-6]_31 chr1:67646210-67646710 9.4e-07 50_[+6]_38 chr12:106074924-10607542 1.1e-06 73_[-6]_15 chr18:59053320-59053820 1.6e-06 19_[+6]_69 chr9:125894467-125894967 2e-06 25_[+6]_63 chr8:120266326-120266826 2.5e-06 41_[+6]_47 chr7:27139889-27140389 2.5e-06 63_[+6]_25 chr16:54654449-54654949 2.7e-06 60_[-6]_28 chr1:224317347-224317847 3.8e-06 71_[+6]_17 chr1:228781078-228781578 3.8e-06 22_[-6]_66 chr6:21953882-21954382 3.8e-06 84_[-6]_4 chr12:54033463-54033963 4.5e-06 33_[-6]_55 chr14:74140321-74140821 5.3e-06 70_[-6]_18 chr4:154030674-154031174 5.8e-06 41_[-6]_47 chr9:123678529-123679029 8.4e-06 15_[+6]_73 chr16:22728335-22728835 1e-05 17_[+6]_71 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif YTGACAGWTTTA MEME-6 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF YTGACAGWTTTA width=12 seqs=23 chr6:143755268-143755768 ( 14) CTGACAGTTTTA 1 chr10:35195681-35196181 ( 32) CTGACAGATTTA 1 chr16:77409287-77409787 ( 50) CTGACAGATTTA 1 chr10:72098746-72099246 ( 32) CTGACAGATTTA 1 chr2:55843193-55843693 ( 59) TTGACAGTTTTA 1 chr2:109213979-109214479 ( 28) CTGACAGCTTTA 1 chr12:54052043-54052543 ( 87) CTGGCAGATTTA 1 chr17:29642211-29642711 ( 58) CTGGCAGATTTA 1 chr1:67646210-67646710 ( 51) CTGACAGATTTC 1 chr12:106074924-10607542 ( 74) ATGACAGTTTTA 1 chr18:59053320-59053820 ( 20) TTGGCAGTTTTA 1 chr9:125894467-125894967 ( 26) CTGACAGATATA 1 chr8:120266326-120266826 ( 42) TTGACAGTTTGA 1 chr7:27139889-27140389 ( 64) TTGACAGTTTGA 1 chr16:54654449-54654949 ( 61) TTGACATTTTTA 1 chr1:224317347-224317847 ( 72) CTGAAAGTTTTA 1 chr1:228781078-228781578 ( 23) TTGACATATTTA 1 chr6:21953882-21954382 ( 85) CTGACATCTTTA 1 chr12:54033463-54033963 ( 34) TGGACAGTTTTA 1 chr14:74140321-74140821 ( 71) CTGACAGCTGTA 1 chr4:154030674-154031174 ( 42) CTGACAGTTATC 1 chr9:123678529-123679029 ( 16) ATGACAGTATTA 1 chr16:22728335-22728835 ( 18) TTGACAGTATTC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif YTGACAGWTTTA MEME-6 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 12 n= 53400 bayes= 12.2448 E= 2.0e+000 -170 138 -1117 29 -1117 -1117 -231 175 -1117 -1117 221 -1117 162 -1117 -73 -1117 -270 214 -1117 -1117 182 -1117 -1117 -1117 -1117 -1117 201 -112 29 -73 -1117 88 -170 -1117 -1117 169 -170 -1117 -231 162 -1117 -1117 -132 169 162 -73 -1117 -1117 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif YTGACAGWTTTA MEME-6 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 12 nsites= 23 E= 2.0e+000 0.086957 0.565217 0.000000 0.347826 0.000000 0.000000 0.043478 0.956522 0.000000 0.000000 1.000000 0.000000 0.869565 0.000000 0.130435 0.000000 0.043478 0.956522 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.869565 0.130435 0.347826 0.130435 0.000000 0.521739 0.086957 0.000000 0.000000 0.913043 0.086957 0.000000 0.043478 0.869565 0.000000 0.000000 0.086957 0.913043 0.869565 0.130435 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif YTGACAGWTTTA MEME-6 regular expression -------------------------------------------------------------------------------- [CT]TGACAG[TA]TTTA -------------------------------------------------------------------------------- Time 1780.42 secs. ******************************************************************************** ******************************************************************************** MOTIF ARCCACA MEME-7 width = 7 sites = 59 llr = 536 E-value = 2.2e+000 ******************************************************************************** -------------------------------------------------------------------------------- Motif ARCCACA MEME-7 Description -------------------------------------------------------------------------------- Simplified A a5::a:a pos.-specific C ::aa:a: probability G :5::::: matrix T ::::::: bits 2.2 ** * 2.0 ** * 1.8 * ***** 1.5 * ***** Relative 1.3 * ***** Entropy 1.1 ******* (13.1 bits) 0.9 ******* 0.7 ******* 0.4 ******* 0.2 ******* 0.0 ------- Multilevel AGCCACA consensus A sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ARCCACA MEME-7 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ------- chr18:31206721-31207221 + 78 4.99e-05 CTTTTAATAG AGCCACA ATATAAAGAA chr7:116218099-116218599 + 65 4.99e-05 ATGCATCTCT AGCCACA ATGAACTTTT chr2:38394734-38395234 + 1 4.99e-05 . agccaca aaatgctcaa chr12:101052040-10105254 - 61 4.99e-05 TTGAGGAATG AGCCACA CTGTAATTCC chr9:125883545-125884045 - 71 4.99e-05 TTCCTGTGGA AGCCACA TGGTTTTATT chr1:51284376-51284876 - 38 4.99e-05 CACAGCAGAA AGCCACA ACCTGACATC chr6:4109414-4109914 + 41 4.99e-05 TTTGGTTAAC AGCCACA GAGGGCAAAG chr1:24705451-24705951 - 40 4.99e-05 AAGGTGGGGA AGCCACA GGAAGGAGAA chr16:22728335-22728835 - 79 4.99e-05 CAGATAGACA AGCCACA TGCACTAAGC chr15:57090365-57090865 + 58 4.99e-05 GGCCTGTTTC AGCCACA TTAATGTCCT chr5:92552210-92552710 + 85 4.99e-05 CACTAAAAAT AGCCACA GGAAGCAAT chr6:33744913-33745413 - 73 4.99e-05 GTTCACTAGC AGCCACA GGGAACAGCA chr1:233241761-233242261 - 25 4.99e-05 AGTCCTCTAA AGCCACA ATGTTTAATT chr3:159416811-159417311 - 26 4.99e-05 GTTCATTTTC AGCCACA TTACAGATTG chr6:152572623-152573123 + 74 4.99e-05 AAAACAAATC AGCCACA AATTCTGAAA chr3:186105549-186106049 + 59 4.99e-05 ACAAACCAAA AGCCACA TAAACTTACC chr19:42032311-42032811 + 93 4.99e-05 attcatgctg agccaca c chr22:38924269-38924769 + 29 4.99e-05 ttcgctgctc agccaca gcggcttcaa chr6:90215928-90216428 + 3 4.99e-05 AC AGCCACA GAAAGCAGTT chr10:122113122-12211362 - 91 4.99e-05 CGC AGCCACA CTCCTCTGCC chr13:50393600-50394100 - 86 4.99e-05 AGGAACCA AGCCACA CAGCAGGAGG chr2:222176771-222177271 + 88 4.99e-05 TTAGGTCAGG AGCCACA ATAGAT chr1:93554078-93554578 + 31 4.99e-05 TTTGGCTAAC AGCCACA GAGGGCAAAG chr6:24960914-24961414 + 25 4.99e-05 tggcaaaaca agccaca taaaaaagac chr5:124599547-124600047 - 22 4.99e-05 AAAACAGGAC AGCCACA GTCTAGAACA chr18:39741936-39742436 - 90 4.99e-05 CCCT AGCCACA GGGGTAAAGC chr3:48237059-48237559 - 8 4.99e-05 CAGCGCAGAA AGCCACA TACTTAA chr1:233112861-233113361 + 17 4.99e-05 CTAAGAATGC AGCCACA GGCTGTGGTC chr14:24463692-24464192 + 71 4.99e-05 AGGCAAGAAA AGCCACA CAAAACCAGG chr5:124651933-124652433 + 94 4.99e-05 TCTTTCTGGA AGCCACA chr10:15409225-15409725 + 25 4.99e-05 ataattggca agccaca tataggagaa chr10:121310096-12131059 + 88 1.15e-04 GTAACTGAGA AACCACA ATTATC chr14:99821669-99822169 - 28 1.15e-04 CTAGCTATCT AACCACA GATACATTCC chr1:26126293-26126793 - 81 1.15e-04 GTTATTATCT AACCACA AACCAACCGT chr5:54302207-54302707 - 8 1.15e-04 CAGTGCTGTT AACCACA AAGACAT chr17:2484146-2484646 - 59 1.15e-04 CTGGCTGCTT AACCACA GACTATTTGT chr5:36502519-36503019 - 46 1.15e-04 TACCAGTGGA AACCACA GGAATCCTGG chr5:99900406-99900906 - 12 1.15e-04 CAAAAGGTGA AACCACA ACAGTTAATT chr18:22342533-22343033 + 50 1.15e-04 TGCATAAAAG AACCACA GGCTGAGCCA chr13:21949758-21950258 - 19 1.15e-04 CAAACCCTCA AACCACA GCAACAGTCA chr5:124740927-124741427 - 71 1.15e-04 TTTATGTGGA AACCACA AGTATGTTGT chr2:224678171-224678671 + 24 1.15e-04 CATTTGCAGA AACCACA GGGGTAAGCT chr6:38974716-38975216 - 76 1.15e-04 CAATCCTAGC AACCACA TTTGAAGAGT chr1:169942357-169942857 - 25 1.15e-04 TTGAATGCCA AACCACA GCCAACTGCA chr6:15504743-15505243 + 11 1.15e-04 AATCCCTTGA AACCACA GTTGTGCTTT chr17:9565980-9566480 + 62 1.15e-04 tgcaaatcga aaccaca atgagatacc chr2:33134238-33134738 - 64 1.15e-04 TGGGATTACT AACCACA ATGCTGCACT chr10:29811589-29812089 - 82 1.15e-04 CTGTGCAGTC AACCACA TGGTTTACAA chr4:145878917-145879417 - 53 1.15e-04 AGCTCTGGGT AACCACA GAAGGTTGGC chr5:34576837-34577337 - 4 1.15e-04 AAAATCTCCA AACCACA GTA chr3:158168014-158168514 + 81 1.15e-04 tgatccagct aaccaca agaattagtc chr21:37547173-37547673 + 91 1.15e-04 GTATTTATTT AACCACA TTC chr2:109213979-109214479 - 42 1.15e-04 TTTACCCATA AACCACA TGCTGACAGC chr4:168634211-168634711 - 52 1.15e-04 ACATGCCACA AACCACA GTGGGCAGAT chr12:43193039-43193539 - 93 1.15e-04 A AACCACA AAAGCAAATG chr10:29657848-29658348 + 83 1.15e-04 AATACAAGAC AACCACA CGTACGAATG chr19:34218200-34218700 - 41 1.15e-04 TGAGAAAACA AACCACA AAACCCCACA chr7:81299265-81299765 + 14 1.15e-04 TTCTTTTGCT AACCACA GCTTCTCAGC chr7:27139889-27140389 - 36 1.15e-04 GAAGTGTCCA AACCACA AGTTCTCAAA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ARCCACA MEME-7 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr18:31206721-31207221 5e-05 77_[+7]_16 chr7:116218099-116218599 5e-05 64_[+7]_29 chr2:38394734-38395234 5e-05 [+7]_93 chr12:101052040-10105254 5e-05 60_[-7]_33 chr9:125883545-125884045 5e-05 70_[-7]_23 chr1:51284376-51284876 5e-05 37_[-7]_56 chr6:4109414-4109914 5e-05 40_[+7]_53 chr1:24705451-24705951 5e-05 39_[-7]_54 chr16:22728335-22728835 5e-05 78_[-7]_15 chr15:57090365-57090865 5e-05 57_[+7]_36 chr5:92552210-92552710 5e-05 84_[+7]_9 chr6:33744913-33745413 5e-05 72_[-7]_21 chr1:233241761-233242261 5e-05 24_[-7]_69 chr3:159416811-159417311 5e-05 25_[-7]_68 chr6:152572623-152573123 5e-05 73_[+7]_20 chr3:186105549-186106049 5e-05 58_[+7]_35 chr19:42032311-42032811 5e-05 92_[+7]_1 chr22:38924269-38924769 5e-05 28_[+7]_65 chr6:90215928-90216428 5e-05 2_[+7]_91 chr10:122113122-12211362 5e-05 90_[-7]_3 chr13:50393600-50394100 5e-05 85_[-7]_8 chr2:222176771-222177271 5e-05 87_[+7]_6 chr1:93554078-93554578 5e-05 30_[+7]_63 chr6:24960914-24961414 5e-05 24_[+7]_69 chr5:124599547-124600047 5e-05 21_[-7]_72 chr18:39741936-39742436 5e-05 89_[-7]_4 chr3:48237059-48237559 5e-05 7_[-7]_86 chr1:233112861-233113361 5e-05 16_[+7]_77 chr14:24463692-24464192 5e-05 70_[+7]_23 chr5:124651933-124652433 5e-05 93_[+7] chr10:15409225-15409725 5e-05 24_[+7]_69 chr10:121310096-12131059 0.00012 87_[+7]_6 chr14:99821669-99822169 0.00012 27_[-7]_66 chr1:26126293-26126793 0.00012 80_[-7]_13 chr5:54302207-54302707 0.00012 7_[-7]_86 chr17:2484146-2484646 0.00012 58_[-7]_35 chr5:36502519-36503019 0.00012 45_[-7]_48 chr5:99900406-99900906 0.00012 11_[-7]_82 chr18:22342533-22343033 0.00012 49_[+7]_44 chr13:21949758-21950258 0.00012 18_[-7]_75 chr5:124740927-124741427 0.00012 70_[-7]_23 chr2:224678171-224678671 0.00012 23_[+7]_70 chr6:38974716-38975216 0.00012 75_[-7]_18 chr1:169942357-169942857 0.00012 24_[-7]_69 chr6:15504743-15505243 0.00012 10_[+7]_83 chr17:9565980-9566480 0.00012 61_[+7]_32 chr2:33134238-33134738 0.00012 63_[-7]_30 chr10:29811589-29812089 0.00012 81_[-7]_12 chr4:145878917-145879417 0.00012 52_[-7]_41 chr5:34576837-34577337 0.00012 3_[-7]_90 chr3:158168014-158168514 0.00012 80_[+7]_13 chr21:37547173-37547673 0.00012 90_[+7]_3 chr2:109213979-109214479 0.00012 41_[-7]_52 chr4:168634211-168634711 0.00012 51_[-7]_42 chr12:43193039-43193539 0.00012 92_[-7]_1 chr10:29657848-29658348 0.00012 82_[+7]_11 chr19:34218200-34218700 0.00012 40_[-7]_53 chr7:81299265-81299765 0.00012 13_[+7]_80 chr7:27139889-27140389 0.00012 35_[-7]_58 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ARCCACA MEME-7 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF ARCCACA width=7 seqs=59 chr18:31206721-31207221 ( 78) AGCCACA 1 chr7:116218099-116218599 ( 65) AGCCACA 1 chr2:38394734-38395234 ( 1) AGCCACA 1 chr12:101052040-10105254 ( 61) AGCCACA 1 chr9:125883545-125884045 ( 71) AGCCACA 1 chr1:51284376-51284876 ( 38) AGCCACA 1 chr6:4109414-4109914 ( 41) AGCCACA 1 chr1:24705451-24705951 ( 40) AGCCACA 1 chr16:22728335-22728835 ( 79) AGCCACA 1 chr15:57090365-57090865 ( 58) AGCCACA 1 chr5:92552210-92552710 ( 85) AGCCACA 1 chr6:33744913-33745413 ( 73) AGCCACA 1 chr1:233241761-233242261 ( 25) AGCCACA 1 chr3:159416811-159417311 ( 26) AGCCACA 1 chr6:152572623-152573123 ( 74) AGCCACA 1 chr3:186105549-186106049 ( 59) AGCCACA 1 chr19:42032311-42032811 ( 93) AGCCACA 1 chr22:38924269-38924769 ( 29) AGCCACA 1 chr6:90215928-90216428 ( 3) AGCCACA 1 chr10:122113122-12211362 ( 91) AGCCACA 1 chr13:50393600-50394100 ( 86) AGCCACA 1 chr2:222176771-222177271 ( 88) AGCCACA 1 chr1:93554078-93554578 ( 31) AGCCACA 1 chr6:24960914-24961414 ( 25) AGCCACA 1 chr5:124599547-124600047 ( 22) AGCCACA 1 chr18:39741936-39742436 ( 90) AGCCACA 1 chr3:48237059-48237559 ( 8) AGCCACA 1 chr1:233112861-233113361 ( 17) AGCCACA 1 chr14:24463692-24464192 ( 71) AGCCACA 1 chr5:124651933-124652433 ( 94) AGCCACA 1 chr10:15409225-15409725 ( 25) AGCCACA 1 chr10:121310096-12131059 ( 88) AACCACA 1 chr14:99821669-99822169 ( 28) AACCACA 1 chr1:26126293-26126793 ( 81) AACCACA 1 chr5:54302207-54302707 ( 8) AACCACA 1 chr17:2484146-2484646 ( 59) AACCACA 1 chr5:36502519-36503019 ( 46) AACCACA 1 chr5:99900406-99900906 ( 12) AACCACA 1 chr18:22342533-22343033 ( 50) AACCACA 1 chr13:21949758-21950258 ( 19) AACCACA 1 chr5:124740927-124741427 ( 71) AACCACA 1 chr2:224678171-224678671 ( 24) AACCACA 1 chr6:38974716-38975216 ( 76) AACCACA 1 chr1:169942357-169942857 ( 25) AACCACA 1 chr6:15504743-15505243 ( 11) AACCACA 1 chr17:9565980-9566480 ( 62) AACCACA 1 chr2:33134238-33134738 ( 64) AACCACA 1 chr10:29811589-29812089 ( 82) AACCACA 1 chr4:145878917-145879417 ( 53) AACCACA 1 chr5:34576837-34577337 ( 4) AACCACA 1 chr3:158168014-158168514 ( 81) AACCACA 1 chr21:37547173-37547673 ( 91) AACCACA 1 chr2:109213979-109214479 ( 42) AACCACA 1 chr4:168634211-168634711 ( 52) AACCACA 1 chr12:43193039-43193539 ( 93) AACCACA 1 chr10:29657848-29658348 ( 83) AACCACA 1 chr19:34218200-34218700 ( 41) AACCACA 1 chr7:81299265-81299765 ( 14) AACCACA 1 chr7:27139889-27140389 ( 36) AACCACA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ARCCACA MEME-7 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 7 n= 56400 bayes= 10.5575 E= 2.2e+000 182 -1253 -1253 -1253 74 -1253 128 -1253 -1253 221 -1253 -1253 -1253 221 -1253 -1253 182 -1253 -1253 -1253 -1253 221 -1253 -1253 182 -1253 -1253 -1253 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ARCCACA MEME-7 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 7 nsites= 59 E= 2.2e+000 1.000000 0.000000 0.000000 0.000000 0.474576 0.000000 0.525424 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ARCCACA MEME-7 regular expression -------------------------------------------------------------------------------- A[GA]CCACA -------------------------------------------------------------------------------- Time 2036.77 secs. ******************************************************************************** ******************************************************************************** MOTIF SAGGCAGTAATGTGAGCARTGG MEME-8 width = 22 sites = 4 llr = 107 E-value = 1.0e+002 ******************************************************************************** -------------------------------------------------------------------------------- Motif SAGGCAGTAATGTGAGCARTGG MEME-8 Description -------------------------------------------------------------------------------- Simplified A :a:::a::a83:::a::a5::: pos.-specific C 5:::a::3::::::::a::3:3 probability G 5:aa::a::3:a:a:a::5:a8 matrix T :::::::8::8:a::::::8:: bits 2.2 *** * * * ** * 2.0 *** * * * ** * 1.8 ****** * ******* * 1.5 ****** * ******* * Relative 1.3 ****** * ******* ** Entropy 1.1 ********************** (38.7 bits) 0.9 ********************** 0.7 ********************** 0.4 ********************** 0.2 ********************** 0.0 ---------------------- Multilevel CAGGCAGTAATGTGAGCAATGG consensus G C GA GC C sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SAGGCAGTAATGTGAGCARTGG MEME-8 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ---------------------- chr13:50393600-50394100 + 6 7.04e-14 gagct caggcagtaatgtgagcagtgg ggagcagctg chr17:2484846-2485346 - 57 1.63e-13 AGGCGGAGCT GAGGCAGTAATGTGAGCAATGG AAAGTGGCTG chr10:15431453-15431953 - 72 1.63e-13 CAGAGTT CAGGCAGTAATGTGAGCAATGG GGAGCAGCTG chr7:27139689-27140189 - 1 3.52e-12 CAACTCTGCG GAGGCAGCAGAGTGAGCAGCGC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SAGGCAGTAATGTGAGCARTGG MEME-8 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr13:50393600-50394100 7e-14 5_[+8]_73 chr17:2484846-2485346 1.6e-13 56_[-8]_22 chr10:15431453-15431953 1.6e-13 71_[-8]_7 chr7:27139689-27140189 3.5e-12 [-8]_78 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SAGGCAGTAATGTGAGCARTGG MEME-8 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF SAGGCAGTAATGTGAGCARTGG width=22 seqs=4 chr13:50393600-50394100 ( 6) CAGGCAGTAATGTGAGCAGTGG 1 chr17:2484846-2485346 ( 57) GAGGCAGTAATGTGAGCAATGG 1 chr10:15431453-15431953 ( 72) CAGGCAGTAATGTGAGCAATGG 1 chr7:27139689-27140189 ( 1) GAGGCAGCAGAGTGAGCAGCGC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SAGGCAGTAATGTGAGCARTGG MEME-8 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 22 n= 47400 bayes= 12.6844 E= 1.0e+002 -865 121 121 -865 182 -865 -865 -865 -865 -865 220 -865 -865 -865 220 -865 -865 220 -865 -865 182 -865 -865 -865 -865 -865 220 -865 -865 21 -865 140 182 -865 -865 -865 140 -865 21 -865 -18 -865 -865 140 -865 -865 220 -865 -865 -865 -865 182 -865 -865 220 -865 182 -865 -865 -865 -865 -865 220 -865 -865 220 -865 -865 182 -865 -865 -865 82 -865 121 -865 -865 21 -865 140 -865 -865 220 -865 -865 21 179 -865 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SAGGCAGTAATGTGAGCARTGG MEME-8 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 22 nsites= 4 E= 1.0e+002 0.000000 0.500000 0.500000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.250000 0.000000 0.750000 1.000000 0.000000 0.000000 0.000000 0.750000 0.000000 0.250000 0.000000 0.250000 0.000000 0.000000 0.750000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.500000 0.000000 0.500000 0.000000 0.000000 0.250000 0.000000 0.750000 0.000000 0.000000 1.000000 0.000000 0.000000 0.250000 0.750000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SAGGCAGTAATGTGAGCARTGG MEME-8 regular expression -------------------------------------------------------------------------------- [CG]AGGCAG[TC]A[AG][TA]GTGAGCA[AG][TC]G[GC] -------------------------------------------------------------------------------- Time 2290.90 secs. ******************************************************************************** ******************************************************************************** MOTIF TTSCYANVWKCCAGRCACTGTG MEME-9 width = 22 sites = 14 llr = 217 E-value = 1.2e+003 ******************************************************************************** -------------------------------------------------------------------------------- Motif TTSCYANVWKCCAGRCACTGTG MEME-9 Description -------------------------------------------------------------------------------- Simplified A 1:21:6233:::9:418:21:: pos.-specific C 22596334119a:::6:7:1:1 probability G ::3:::22161:1a512:1619 matrix T 68::413154::1:12:3619: bits 2.2 * * 2.0 * * 1.8 * * * 1.5 * ** * ** Relative 1.3 * ** * * ** Entropy 1.1 * ** **** ** ** (22.4 bits) 0.9 * ** ***** ** ** 0.7 ****** ************* 0.4 ****** ************* 0.2 ****** *************** 0.0 ---------------------- Multilevel TTCCCACCTGCCAGGCACTGTG consensus CCG TCTAAT ATGTA sequence A AG G -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTSCYANVWKCCAGRCACTGTG MEME-9 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ---------------------- chr7:135716607-135717107 - 46 1.04e-11 TTCCAAGTGT TTACCATATGCCAGGCACTGTG GGAGGTCATT chr17:35729463-35729963 + 50 2.34e-11 atgctgagac ttcctacatgccaggcattgtg ttaaggattt chr15:39403547-39404047 + 30 1.70e-09 AAACAAGCAC TTACTCCATTCCAGGCATTGTG CCAATCACTA chr1:85274860-85275360 - 42 9.38e-09 AGAGCTAGGC CTCCTATGTTCCAGATGCTGTG TCACACAGTT chr11:110759832-11076033 + 62 1.28e-08 ACTCCAAGAT TTACTTTCAGCCAGGCACTCTG TACTTCCTGG chr12:1605448-1605948 - 7 1.89e-08 CGCCTTCTCT TCCCTCCTCTCCAGACGCTGTG CCTGGC chr9:125473190-125473690 + 5 5.11e-08 ACTT CTGACAGCTTCCAGATACAGTG AGTCAAACTT chr12:810628-811128 + 55 6.05e-08 CCCCACCCCA CCCCCAGCAGCCTGGAACTGTG CATGTTATGA chr18:59455095-59455595 + 41 8.38e-08 ACTGTAAATA TTCCCCAAGTGCAGGCACTGGG CCTCAAAGCT chr1:61091467-61091967 - 43 1.44e-07 AATTGTGACC TTGCCACGTGCCGGGTATATTG TAGATTCTGA chr9:20619730-20620230 + 21 1.44e-07 CTCCCTGCAG ATCACATCCGGCAGACACTTTG GAACGTTGCT chr5:54310302-54310802 - 26 1.79e-07 CAGGAGCTGC TCGCTCGCAGCCAGAGACGCTG CTTTTTTTTT chr17:73575399-73575899 - 62 2.36e-07 CATATCTTAC TTGCCAAGTGCCAGACGCAATC CTACATGCTT chr5:59021170-59021670 - 4 5.42e-07 TGCCTTTGAA ATCCCAATACCCAGTCATGGTG ATT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTSCYANVWKCCAGRCACTGTG MEME-9 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr7:135716607-135717107 1e-11 45_[-9]_33 chr17:35729463-35729963 2.3e-11 49_[+9]_29 chr15:39403547-39404047 1.7e-09 29_[+9]_49 chr1:85274860-85275360 9.4e-09 41_[-9]_37 chr11:110759832-11076033 1.3e-08 61_[+9]_17 chr12:1605448-1605948 1.9e-08 6_[-9]_72 chr9:125473190-125473690 5.1e-08 4_[+9]_74 chr12:810628-811128 6e-08 54_[+9]_24 chr18:59455095-59455595 8.4e-08 40_[+9]_38 chr1:61091467-61091967 1.4e-07 42_[-9]_36 chr9:20619730-20620230 1.4e-07 20_[+9]_58 chr5:54310302-54310802 1.8e-07 25_[-9]_53 chr17:73575399-73575899 2.4e-07 61_[-9]_17 chr5:59021170-59021670 5.4e-07 3_[-9]_75 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTSCYANVWKCCAGRCACTGTG MEME-9 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TTSCYANVWKCCAGRCACTGTG width=22 seqs=14 chr7:135716607-135717107 ( 46) TTACCATATGCCAGGCACTGTG 1 chr17:35729463-35729963 ( 50) TTCCTACATGCCAGGCATTGTG 1 chr15:39403547-39404047 ( 30) TTACTCCATTCCAGGCATTGTG 1 chr1:85274860-85275360 ( 42) CTCCTATGTTCCAGATGCTGTG 1 chr11:110759832-11076033 ( 62) TTACTTTCAGCCAGGCACTCTG 1 chr12:1605448-1605948 ( 7) TCCCTCCTCTCCAGACGCTGTG 1 chr9:125473190-125473690 ( 5) CTGACAGCTTCCAGATACAGTG 1 chr12:810628-811128 ( 55) CCCCCAGCAGCCTGGAACTGTG 1 chr18:59455095-59455595 ( 41) TTCCCCAAGTGCAGGCACTGGG 1 chr1:61091467-61091967 ( 43) TTGCCACGTGCCGGGTATATTG 1 chr9:20619730-20620230 ( 21) ATCACATCCGGCAGACACTTTG 1 chr5:54310302-54310802 ( 26) TCGCTCGCAGCCAGAGACGCTG 1 chr17:73575399-73575899 ( 62) TTGCCAAGTGCCAGACGCAATC 1 chr5:59021170-59021670 ( 4) ATCCCAATACCCAGTCATGGTG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTSCYANVWKCCAGRCACTGTG MEME-9 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 22 n= 47400 bayes= 12.3307 E= 1.2e+003 -99 -1 -1045 118 -1045 -1 -1045 147 -40 121 40 -1045 -99 198 -1045 -1045 -1045 140 -1045 60 118 40 -1045 -199 -40 40 -1 1 1 72 -1 -99 1 -60 -160 82 -1045 -160 140 33 -1045 198 -60 -1045 -1045 221 -1045 -1045 160 -1045 -160 -199 -1045 -1045 221 -1045 60 -1045 121 -199 -199 157 -160 -40 147 -1045 -1 -1045 -1045 172 -1045 1 -40 -1045 -60 118 -199 -60 157 -99 -1045 -1045 -160 171 -1045 -160 210 -1045 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTSCYANVWKCCAGRCACTGTG MEME-9 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 22 nsites= 14 E= 1.2e+003 0.142857 0.214286 0.000000 0.642857 0.000000 0.214286 0.000000 0.785714 0.214286 0.500000 0.285714 0.000000 0.142857 0.857143 0.000000 0.000000 0.000000 0.571429 0.000000 0.428571 0.642857 0.285714 0.000000 0.071429 0.214286 0.285714 0.214286 0.285714 0.285714 0.357143 0.214286 0.142857 0.285714 0.142857 0.071429 0.500000 0.000000 0.071429 0.571429 0.357143 0.000000 0.857143 0.142857 0.000000 0.000000 1.000000 0.000000 0.000000 0.857143 0.000000 0.071429 0.071429 0.000000 0.000000 1.000000 0.000000 0.428571 0.000000 0.500000 0.071429 0.071429 0.642857 0.071429 0.214286 0.785714 0.000000 0.214286 0.000000 0.000000 0.714286 0.000000 0.285714 0.214286 0.000000 0.142857 0.642857 0.071429 0.142857 0.642857 0.142857 0.000000 0.000000 0.071429 0.928571 0.000000 0.071429 0.928571 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTSCYANVWKCCAGRCACTGTG MEME-9 regular expression -------------------------------------------------------------------------------- [TC][TC][CGA]C[CT][AC][CTAG][CAG][TA][GT]CCAG[GA][CT][AG][CT][TA]GTG -------------------------------------------------------------------------------- Time 2544.98 secs. ******************************************************************************** ******************************************************************************** MOTIF GAGGGCAAAGTTTAAGACTTTCTTGTAAGGA MEME-10 width = 31 sites = 2 llr = 85 E-value = 7.7e+005 ******************************************************************************** -------------------------------------------------------------------------------- Motif GAGGGCAAAGTTTAAGACTTTCTTGTAAGGA MEME-10 Description -------------------------------------------------------------------------------- Simplified A :a::::aaa::::aa:a:::::::::aa::a pos.-specific C :::::a:::::::::::a:::a::::::::: probability G a:aaa::::a:::::a::::::::a:::aa: matrix T ::::::::::aaa:::::aaa:aa:a::::: bits 2.2 * **** * * * * * ** 2.0 * **** * * * * * ** 1.8 ******************************* 1.5 ******************************* Relative 1.3 ******************************* Entropy 1.1 ******************************* (61.0 bits) 0.9 ******************************* 0.7 ******************************* 0.4 ******************************* 0.2 ******************************* 0.0 ------------------------------- Multilevel GAGGGCAAAGTTTAAGACTTTCTTGTAAGGA consensus sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GAGGGCAAAGTTTAAGACTTTCTTGTAAGGA MEME-10 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ------------------------------- chr6:4109414-4109914 + 48 4.23e-19 AACAGCCACA GAGGGCAAAGTTTAAGACTTTCTTGTAAGGA CTAACTGTTC chr1:93554078-93554578 + 38 4.23e-19 AACAGCCACA GAGGGCAAAGTTTAAGACTTTCTTGTAAGGA CTAACTGTTC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GAGGGCAAAGTTTAAGACTTTCTTGTAAGGA MEME-10 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr6:4109414-4109914 4.2e-19 47_[+10]_22 chr1:93554078-93554578 4.2e-19 37_[+10]_32 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GAGGGCAAAGTTTAAGACTTTCTTGTAAGGA MEME-10 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF GAGGGCAAAGTTTAAGACTTTCTTGTAAGGA width=31 seqs=2 chr6:4109414-4109914 ( 48) GAGGGCAAAGTTTAAGACTTTCTTGTAAGGA 1 chr1:93554078-93554578 ( 38) GAGGGCAAAGTTTAAGACTTTCTTGTAAGGA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GAGGGCAAAGTTTAAGACTTTCTTGTAAGGA MEME-10 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 31 n= 42000 bayes= 14.358 E= 7.7e+005 -765 -765 220 -765 181 -765 -765 -765 -765 -765 220 -765 -765 -765 220 -765 -765 -765 220 -765 -765 220 -765 -765 181 -765 -765 -765 181 -765 -765 -765 181 -765 -765 -765 -765 -765 220 -765 -765 -765 -765 181 -765 -765 -765 181 -765 -765 -765 181 181 -765 -765 -765 181 -765 -765 -765 -765 -765 220 -765 181 -765 -765 -765 -765 220 -765 -765 -765 -765 -765 181 -765 -765 -765 181 -765 -765 -765 181 -765 220 -765 -765 -765 -765 -765 181 -765 -765 -765 181 -765 -765 220 -765 -765 -765 -765 181 181 -765 -765 -765 181 -765 -765 -765 -765 -765 220 -765 -765 -765 220 -765 181 -765 -765 -765 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GAGGGCAAAGTTTAAGACTTTCTTGTAAGGA MEME-10 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 31 nsites= 2 E= 7.7e+005 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GAGGGCAAAGTTTAAGACTTTCTTGTAAGGA MEME-10 regular expression -------------------------------------------------------------------------------- GAGGGCAAAGTTTAAGACTTTCTTGTAAGGA -------------------------------------------------------------------------------- Time 2794.45 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr18:35583151-35583651 6.61e-03 24_[-8(6.10e-05)]_54 chr1:198162202-198162702 1.77e-03 39_[+5(3.90e-05)]_8_[-1(1.75e-05)]_\ 20_[-5(4.47e-05)] chr12:71627445-71627945 1.35e-01 100 chr14:50599981-50600481 1.28e-02 23_[-5(6.22e-05)]_65 chr12:51371291-51371791 2.84e-01 13_[+8(8.79e-05)]_65 chr12:32032192-32032692 1.92e-01 100 chr11:130103383-13010388 5.07e-01 100 chr10:15409225-15409725 1.17e-01 24_[+7(4.99e-05)]_69 chr5:125409123-125409623 1.06e-02 50_[+1(2.68e-05)]_41 chrX:39705231-39705731 4.38e-01 37_[-3(4.18e-05)]_54 chr1:100894497-100894997 3.15e-03 18_[-1(1.75e-05)]_[-2(2.83e-06)]_61 chr3:81716848-81717348 1.55e-01 52_[+1(2.68e-05)]_39 chr10:29646371-29646871 3.91e-01 100 chr9:125887119-125887619 6.88e-02 61_[+1(9.30e-05)]_30 chr10:72098746-72099246 8.63e-03 31_[+6(1.84e-07)]_57 chr21:33136850-33137350 3.86e-01 100 chr2:144430814-144431314 4.18e-03 18_[+2(2.46e-05)]_56_[+3(2.72e-05)]_\ 5 chr5:119063510-119064010 1.44e-01 23_[-2(6.02e-05)]_65 chr1:160260947-160261447 9.08e-03 52_[+5(1.52e-06)]_36 chr8:60807645-60808145 3.76e-02 100 chr1:220118998-220119498 7.36e-01 100 chr16:12120449-12120949 1.38e-02 21_[-2(9.12e-06)]_36_[-1(7.27e-05)]_\ 22 chr7:27139889-27140389 1.01e-03 6_[-3(2.72e-05)]_48_[+6(2.50e-06)]_\ 25 chr5:125485037-125485537 1.79e-02 69_[-8(5.86e-06)]_9 chr2:216750784-216751284 8.26e-05 7_[+2(2.15e-06)]_54_[+8(5.50e-05)]_\ 5 chr1:228900262-228900762 9.16e-02 45_[-3(5.50e-05)]_46 chr11:11463305-11463805 6.17e-02 100 chr10:117148219-11714871 2.46e-02 54_[-5(5.37e-06)]_34 chr7:81299265-81299765 2.72e-04 9_[-10(7.51e-05)]_47_[-3(4.18e-05)]_\ 4 chr6:154456968-154457468 4.06e-02 55_[+9(4.32e-05)]_23 chr10:35890239-35890739 1.40e-02 11_[+5(2.81e-05)]_77 chr5:124651933-124652433 2.26e-02 80_[-1(3.89e-05)]_4_[+7(4.99e-05)] chr8:105090292-105090792 3.90e-01 100 chr11:126115877-12611637 7.95e-02 58_[+2(3.14e-05)]_30 chr12:19575763-19576263 1.14e-01 [+3(8.04e-06)]_91 chr5:91022439-91022939 3.03e-04 17_[+3(4.18e-05)]_19_[-6(8.40e-06)]_\ 43 chr12:109695992-10969649 1.81e-02 86_[-5(2.81e-05)]_2 chr6:330845-331345 1.87e-02 1_[-1(3.89e-05)]_64_[-2(3.91e-05)]_\ 14 chr9:125473190-125473690 1.90e-03 4_[+9(5.11e-08)]_74 chr10:36423758-36424258 3.74e-01 100 chr3:58471220-58471720 7.62e-01 100 chr4:111883474-111883974 3.55e-01 100 chr12:117494951-11749545 1.68e-01 69_[-1(3.89e-05)]_22 chr9:125541816-125542316 8.78e-02 56_[+5(7.01e-05)]_32 chr18:62387214-62387714 2.64e-01 9_[+5(1.36e-05)]_79 chr2:27771505-27772005 3.13e-01 29_[-3(8.18e-05)]_62 chr12:806407-806907 1.64e-02 24_[+5(5.37e-06)]_64 chr15:39403547-39404047 4.80e-05 29_[+9(1.70e-09)]_49 chr6:1597039-1597539 5.32e-02 100 chr1:224623832-224624332 8.19e-02 55_[-2(6.94e-05)]_33 chr9:77150631-77151131 1.58e-03 21_[-2(2.15e-06)]_24_[+1(1.75e-05)]_\ 34 chr3:9142302-9142802 4.24e-01 100 chr19:34218200-34218700 1.77e-03 100 chr6:116933393-116933893 7.96e-03 55_[-1(5.29e-06)]_36 chr10:29657848-29658348 1.62e-02 24_[+1(7.27e-05)]_67 chr2:59383379-59383879 1.89e-02 45_[-8(6.65e-05)]_33 chr18:499407-499907 2.48e-01 100 chr2:205866025-205866525 2.44e-01 100 chr16:53849954-53850454 5.75e-02 45_[+1(1.75e-05)]_46 chr4:140092324-140092824 5.64e-02 87_[-6(6.19e-05)]_1 chr14:61558243-61558743 4.53e-02 17_[+8(9.32e-05)]_61 chr6:111888888-111889388 1.32e-01 100 chr1:26470532-26471032 4.17e-02 100 chr4:182556012-182556512 6.02e-02 45_[+2(7.91e-05)]_43 chr5:126875242-126875742 1.03e-01 15_[-2(1.43e-05)]_73 chr6:10407653-10408153 6.20e-02 100 chr7:80876820-80877320 4.70e-01 20_[-6(7.89e-05)]_68 chr15:96694000-96694500 2.83e-01 100 chr5:14131880-14132380 2.92e-01 100 chr11:19519961-19520461 3.29e-03 60_[+2(1.43e-05)]_28 chrX:136039451-136039951 5.19e-02 68_[-1(9.83e-05)]_23 chr15:26051755-26052255 5.54e-01 100 chr19:28596439-28596939 2.40e-01 100 chr1:3402115-3402615 7.77e-01 100 chr12:92144069-92144569 6.44e-01 100 chr11:126284840-12628534 2.47e-02 70_[-1(1.75e-05)]_21 chr3:24365214-24365714 2.89e-01 100 chr6:21953882-21954382 6.34e-03 84_[-6(3.77e-06)]_4 chr15:36948886-36949386 2.06e-01 100 chr11:131997904-13199840 4.57e-03 40_[-5(9.15e-06)]_9_[-5(9.15e-06)]_\ 27 chr6:90895447-90895947 4.92e-02 34_[-6(2.66e-05)]_34_[-5(6.22e-05)]_\ 8 chr3:190973732-190974232 1.30e-01 100 chr17:79993471-79993971 4.64e-01 100 chr12:12791919-12792419 1.23e-01 100 chr18:58143306-58143806 2.74e-01 23_[+9(8.49e-05)]_55 chr8:124077231-124077731 8.12e-02 37_[+5(3.36e-05)]_51 chr17:45345422-45345922 1.65e-01 39_[+5(3.90e-05)]_49 chr3:182365018-182365518 1.15e-02 100 chr12:43193039-43193539 9.20e-05 14_[-1(3.49e-05)]_47_[-2(2.15e-06)]_\ 18 chr20:20215877-20216377 5.25e-02 9_[+2(7.91e-05)]_79 chr9:125904301-125904801 1.05e-01 86_[-1(9.30e-05)]_5 chr5:124274321-124274821 3.02e-04 4_[-5(9.94e-05)]_30_[+3(4.02e-06)]_\ 19_[-8(6.36e-05)]_4 chr13:106096577-10609707 6.37e-01 100 chr6:93183509-93184009 3.50e-01 100 chr13:39385766-39386266 4.84e-02 100 chr1:67646210-67646710 2.27e-04 50_[+6(9.39e-07)]_10_[+8(3.64e-06)]_\ 6 chr3:4320382-4320882 6.43e-02 55_[-5(2.33e-06)]_14_[+5(3.36e-05)]_\ 7 chr18:50631730-50632230 3.48e-02 23_[+1(9.30e-05)]_68 chr7:85049426-85049926 5.70e-04 82_[+2(6.02e-05)]_6 chr14:24463692-24464192 7.37e-04 70_[+7(4.99e-05)]_23 chr18:33660799-33661299 1.47e-01 2_[+1(1.75e-05)]_89 chr2:111185599-111186099 6.83e-03 25_[+10(7.51e-05)]_5_[+5(2.81e-05)]_\ 27 chr6:26029195-26029695 4.46e-02 23_[+3(3.25e-05)]_68 chr8:37547850-37548350 3.35e-02 58_[-5(2.81e-05)]_30 chr13:75437556-75438056 6.22e-01 100 chr4:168634211-168634711 2.16e-02 100 chr1:233112861-233113361 2.02e-02 16_[+7(4.99e-05)]_77 chr19:11137718-11138218 5.63e-01 100 chr12:810628-811128 3.63e-04 54_[+9(6.05e-08)]_24 chr17:73575399-73575899 8.48e-02 61_[-9(2.36e-07)]_17 chr10:110163312-11016381 1.62e-03 23_[+10(2.94e-06)]_46 chr17:14622658-14623158 5.54e-01 100 chr12:65593199-65593699 1.14e-02 6_[-3(4.18e-05)]_38_[+5(4.47e-05)]_\ 35 chr6:47034841-47035341 2.99e-01 100 chr5:173312780-173313280 2.65e-03 19_[-1(1.75e-05)]_72 chr5:160119295-160119795 3.08e-01 100 chr3:181252560-181253060 4.90e-02 7_[+3(7.26e-05)]_84 chr4:24646064-24646564 9.10e-02 5_[-1(7.27e-05)]_86 chr10:129606036-12960653 3.22e-01 100 chr3:48237059-48237559 8.38e-03 7_[-7(4.99e-05)]_86 chr16:22232692-22233192 1.01e-02 36_[+3(5.50e-05)]_13_[+2(6.94e-05)]_\ 30 chr2:55843193-55843693 5.05e-02 58_[-6(3.05e-07)]_30 chr5:124735011-124735511 3.19e-01 100 chr2:48279284-48279784 3.69e-03 25_[+1(9.30e-05)]_5_[-9(2.34e-05)]_\ 6_[-1(7.27e-05)]_24 chr19:38862480-38862980 2.94e-01 100 chr11:110759832-11076033 2.82e-05 28_[-1(5.29e-06)]_24_[+9(1.28e-08)]_\ 17 chr6:143755268-143755768 6.29e-03 13_[+6(9.21e-08)]_75 chr5:107389068-107389568 2.07e-01 100 chr9:85743177-85743677 6.75e-02 100 chr12:114914172-11491467 1.08e-02 100 chr7:28572460-28572960 3.82e-01 100 chr10:8233859-8234359 8.27e-01 100 chr15:33126521-33127021 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chr10:44752630-44753130 3.50e-02 44_[+5(5.61e-05)]_44 chr1:81127006-81127506 1.81e-01 100 chr14:99821669-99822169 1.78e-01 100 chr13:28336014-28336514 3.67e-03 33_[-3(2.72e-05)]_34_[+1(2.68e-05)]_\ 15 chr1:87718305-87718805 1.18e-01 100 chr15:69855589-69856089 3.72e-03 33_[+3(2.72e-05)]_58 chr10:125633455-12563395 7.01e-02 15_[+5(9.94e-05)]_73 chr5:88516376-88516876 6.52e-01 100 chr7:135716607-135717107 3.00e-07 45_[-9(1.04e-11)]_33 chr5:78908208-78908708 9.70e-03 5_[+3(5.50e-05)]_72_[-6(1.70e-05)]_\ 2 chr1:80403332-80403832 1.40e-03 78_[-6(1.06e-06)]_10 chr16:15590837-15591337 5.65e-01 100 chr6:82260172-82260672 1.25e-01 100 chr6:1667104-1667604 1.02e-01 100 chr1:228902961-228903461 1.13e-02 32_[-2(2.17e-05)]_56 chr5:56112433-56112933 6.78e-03 100 chr8:37360480-37360980 1.10e-01 17_[-2(9.42e-05)]_71 chr9:13979392-13979892 5.45e-03 [+5(3.36e-05)]_29_[+1(2.68e-05)]_24_\ [-3(3.25e-05)]_17 chr7:98476737-98477237 2.71e-01 100 chr7:116218099-116218599 8.23e-02 64_[+7(4.99e-05)]_29 chr15:59953465-59953965 2.64e-01 100 chr8:33513435-33513935 3.46e-03 40_[-1(2.68e-05)]_51 chr18:31206721-31207221 3.47e-04 63_[-1(2.68e-05)]_5_[+7(4.99e-05)]_\ 3_[+2(2.80e-05)]_1 chr8:37302602-37303102 4.39e-02 87_[-6(4.79e-05)]_1 chr17:37488178-37488678 3.40e-04 53_[+2(2.17e-05)]_22_[-1(5.29e-06)]_\ 4 chr12:121202889-12120338 1.96e-02 12_[+3(5.50e-05)]_55_[+5(1.14e-05)]_\ 12 chr5:77995845-77996345 7.37e-02 23_[-1(3.49e-05)]_68 chr17:2484846-2485346 3.41e-08 46_[-3(6.33e-05)]_1_[-8(1.63e-13)]_\ 22 chr9:125894467-125894967 1.59e-02 25_[+6(2.05e-06)]_63 chrX:12240507-12241007 4.38e-01 100 chr10:75358946-75359446 1.70e-02 31_[+3(1.61e-05)]_60 chr1:8439036-8439536 3.16e-03 20_[+2(7.87e-06)]_68 chr1:198837492-198837992 1.39e-02 12_[-2(4.68e-06)]_76 chr10:125708920-12570942 2.27e-04 79_[-3(1.61e-05)]_12 chr1:234544054-234544554 1.72e-02 49_[-3(6.33e-05)]_42 chr1:234603820-234604320 6.81e-02 100 chr5:34854432-34854932 2.18e-03 45_[-1(1.75e-05)]_6_[-3(5.50e-05)]_\ 9_[+3(7.26e-05)]_13 chr5:119328741-119329241 3.48e-02 37_[-1(7.27e-05)]_1_[-2(1.43e-05)]_\ 41 chr10:75379172-75379672 7.85e-02 14_[-6(3.04e-05)]_74 chr10:75294724-75295224 9.14e-02 13_[-2(3.91e-05)]_75 chr3:17730365-17730865 2.42e-01 77_[-5(1.75e-05)]_11 chr6:21264232-21264732 5.13e-01 61_[-3(9.55e-05)]_30 chr18:12520342-12520842 2.73e-02 84_[-5(6.22e-05)]_4 chr1:11178286-11178786 2.00e-02 100 chr5:124742105-124742605 2.08e-03 18_[+3(7.26e-05)]_10_[+1(2.68e-05)]_\ 37_[+3(2.72e-05)]_8 chr10:121310096-12131059 1.12e-01 100 chr18:59455095-59455595 1.59e-03 40_[+9(8.38e-08)]_38 chr10:77287672-77288172 2.77e-01 100 chr7:132485146-132485646 3.12e-02 100 chr5:59303192-59303692 3.26e-21 23_[-2(2.15e-06)]_4_[-4(1.71e-26)]_\ 18 chr1:46643342-46643842 7.03e-03 47_[+3(1.61e-05)]_44 chr14:91284843-91285343 7.97e-02 8_[-5(1.36e-05)]_80 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (10) found. ******************************************************************************** CPU: indra ********************************************************************************