******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 4.12.0 (Release date: Tue Jun 27 16:22:50 2017 -0700) For further information on how to interpret these results or to get a copy of the MEME software please access http://meme-suite.org . This file may be used as input to the MAST algorithm for searching sequence databases for matches to groups of motifs. MAST is available for interactive use and downloading at http://meme-suite.org . ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** DATAFILE= /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/BCL11B.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/seqs-centered ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chr19:37594312-37594812 1.0000 100 chr3:194350309-194350809 1.0000 100 chr6:31829615-31830115 1.0000 100 chr19:19634170-19634670 1.0000 100 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100 chr19:35994993-35995493 1.0000 100 chr19:42349668-42350168 1.0000 100 chr6:24774933-24775433 1.0000 100 chr5:49421-49921 1.0000 100 chr21:39313553-39314053 1.0000 100 chr17:42676572-42677072 1.0000 100 chr1:26189281-26189781 1.0000 100 chr19:40420482-40420982 1.0000 100 chr1:154974027-154974527 1.0000 100 chr5:352560-353060 1.0000 100 chr10:21525583-21526083 1.0000 100 chr10:78029082-78029582 1.0000 100 chr12:54052039-54052539 1.0000 100 chr5:396964-397464 1.0000 100 chr1:35769973-35770473 1.0000 100 chr16:30355366-30355866 1.0000 100 chr19:34218137-34218637 1.0000 100 chr7:148331395-148331895 1.0000 100 chr7:73522234-73522734 1.0000 100 chr19:48363403-48363903 1.0000 100 chr19:36214330-36214830 1.0000 100 chr19:1173455-1173955 1.0000 100 chr1:27348760-27349260 1.0000 100 chr1:173868266-173868766 1.0000 100 chr1:31431798-31432298 1.0000 100 chr6:31959115-31959615 1.0000 100 chr10:75379154-75379654 1.0000 100 chr19:39412495-39412995 1.0000 100 chr12:131929296-13192979 1.0000 100 chr19:11402130-11402630 1.0000 100 chr20:48921349-48921849 1.0000 100 chr8:33513353-33513853 1.0000 100 chr5:684840-685340 1.0000 100 chr3:194134796-194135296 1.0000 100 chr5:149551536-149552036 1.0000 100 chr19:30004318-30004818 1.0000 100 chr1:1145217-1145717 1.0000 100 chr1:27364297-27364797 1.0000 100 chr15:71115050-71115550 1.0000 100 chr1:155244574-155245074 1.0000 100 chr16:19536-20036 1.0000 100 chr22:20117215-20117715 1.0000 100 chr3:181328958-181329458 1.0000 100 chr4:77075936-77076436 1.0000 100 chr17:82586128-82586628 1.0000 100 chr19:6737938-6738438 1.0000 100 chr11:67265972-67266472 1.0000 100 chr19:43950894-43951394 1.0000 100 chr17:82065712-82066212 1.0000 100 chr17:34981743-34982243 1.0000 100 chr22:50705039-50705539 1.0000 100 chr19:18224075-18224575 1.0000 100 chr5:352361-352861 1.0000 100 chr1:974695-975195 1.0000 100 chr16:30698971-30699471 1.0000 100 chr12:123383426-12338392 1.0000 100 chr16:1651042-1651542 1.0000 100 chr19:50406345-50406845 1.0000 100 chr2:27890118-27890618 1.0000 100 chr19:35889342-35889842 1.0000 100 chr2:218568520-218569020 1.0000 100 chr19:44813525-44814025 1.0000 100 chr19:727090-727590 1.0000 100 chr6:167735002-167735502 1.0000 100 chr19:50415950-50416450 1.0000 100 chr19:40750067-40750567 1.0000 100 chr22:46762618-46763118 1.0000 100 chr19:11400849-11401349 1.0000 100 chr19:39125819-39126319 1.0000 100 chr6:82260153-82260653 1.0000 100 chr12:51172684-51173184 1.0000 100 chr4:705073-705573 1.0000 100 chr16:1651582-1652082 1.0000 100 chrX:1392315-1392815 1.0000 100 chr1:236097030-236097530 1.0000 100 chr19:40612052-40612552 1.0000 100 chr19:38196266-38196766 1.0000 100 chr5:1501654-1502154 1.0000 100 chr19:58557940-58558440 1.0000 100 chr1:228452408-228452908 1.0000 100 chr19:50790870-50791370 1.0000 100 chr7:159013209-159013709 1.0000 100 chr11:65551579-65552079 1.0000 100 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/BCL11B.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/seqs-centered -oc /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/BCL11B.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/meme_out -mod zoops -nmotifs 10 -minw 5 -maxw 50 -bfile /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/BCL11B.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/background -dna -revcomp -nostatus model: mod= zoops nmotifs= 10 evt= inf object function= E-value of product of p-values width: minw= 5 maxw= 50 width: wg= 11 ws= 1 endgaps= yes nsites: minsites= 2 maxsites= 600 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 global: substring= yes branching= no wbranch= no em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 data: n= 60000 N= 600 shuffle= -1 strands: + - sample: seed= 0 ctfrac= -1 maxwords= -1 Letter frequencies in dataset: A 0.211 C 0.289 G 0.289 T 0.211 Background letter frequencies (from /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/BCL11B.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/background): A 0.212 C 0.288 G 0.288 T 0.212 ******************************************************************************** ******************************************************************************** MOTIF RGRBNRRGGTCAGRGGTCAGGGKBMVGGGS MEME-1 width = 30 sites = 128 llr = 1646 E-value = 3.3e-215 ******************************************************************************** -------------------------------------------------------------------------------- Motif RGRBNRRGGTCAGRGGTCAGGGKBMVGGGS MEME-1 Description -------------------------------------------------------------------------------- Simplified A 313123411::825::::822211322222 pos.-specific C 121321:::181::::17:21::3422112 probability G 45532559921:74aa:1266753145654 matrix T 22233::::711::::82::1133111122 bits 2.2 2.0 1.8 1.6 ** Relative 1.3 ** * *** * Entropy 1.1 ** * *** * (18.5 bits) 0.9 **** ****** * * 0.7 ************* * 0.4 ************** ** 0.2 *** ****************** * *** 0.0 ------------------------------ Multilevel GGGGTGGGGTCAGAGGTCAGGGGGCGGGGG consensus A ACAAA AG GAAATCACAATC sequence TC T A G -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RGRBNRRGGTCAGRGGTCAGGGKBMVGGGS MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ------------------------------ chrX:156019633-156020133 + 55 7.38e-13 tcagggtcaa gggtcagggtcaggggtcagggtcagggtg agggtcaggg chr22:46762618-46763118 + 52 4.23e-12 GCGGagggcc aggtcggggtcaggggtcagaggtcaggTG GCCGCGTTGG chr1:1239705-1240205 + 50 1.92e-11 cagggcatgg ggtcaagggtcaggggtcaggggtcgggtt gaggCCGTCC chr19:19634170-19634670 + 35 1.92e-11 agaaaacaca ggtcaaaggtcagaggtcagtgtcaggggt cagCCAGGGA chr3:198173990-198174490 + 23 3.81e-11 tttgggtcaa gggttagggtcaagggttagggttaggggt taagagttag chr22:50705039-50705539 - 62 7.29e-11 AGGAGGGGC AGCCTGAGGTCAGGGGTCAGGGGTCAAAGG CCTCAGGCCA chr7:4641733-4642233 + 50 1.65e-10 AGGGGAGTGG GGTCGGAGGTCAGAGGTCAGCGGGCGCGGG GTCGCCGGCT chr19:10252256-10252756 - 56 2.01e-10 CCTGGAGCGA TTGCGGGGGTCAGAGGTTAGGGTCAAGGGT CAGACCTCTC chr17:42117628-42118128 + 44 2.43e-10 GGGAAGGAGT GAATGAGGGTCAGAGGTCAGGGGTCAAGTA TCCACCTGGC chr2:218568520-218569020 + 70 3.54e-10 AGAGGATGTG TGGGTGGGGTCAGGGGTGAGAGGTCAGAGG G chr1:26189281-26189781 - 47 4.26e-10 GCTAGAGTGC TGGCCAGGGTCAGAGGTCAGGAGGTCGGAG GCTGCTCTCT chr4:190122275-190122775 + 35 4.26e-10 gtgagggtga gggttagggttaggggttagggtcagggtc agggtcaggg chrX:1392315-1392815 - 45 8.67e-10 GCTGCCCGGA GGTCAAGGGTCAAGGGTCGGGGGTCGGGGC ACCACATGTC chr19:42349668-42350168 - 68 8.67e-10 AAA GTATGGAGGGCAGAGGTCAGGGTCAGCAGG GTCAAGGGTG chr21:43776506-43777006 + 25 8.67e-10 GGGCGCAGCG CTGCAGGGGTCAGGGGTCAGGGGTCCCGGC CCCGCGGGAG chr17:50113562-50114062 + 68 1.70e-09 CAGGAGGCTG GGCTGAGGGTCAAAGGTCAGGATGAGGGAC TTC chr16:689436-689936 + 15 2.00e-09 GGCTGCACAG GTGATGAGGTCAGGGGTCAGGAGGTCAGTG AGGTGGGCTG chr4:705073-705573 - 47 2.35e-09 TTTAGGTTTA GGGTCAGGGTTAGGGGTTAGAGTCAGGGTT AGGACTGGGT chr11:64259391-64259891 - 30 2.35e-09 TGAGGTGAAC AGTCAGGGGTGAGAGGTCAGAGGTCAGCTG AAATGATAAC chr22:20117215-20117715 + 69 3.22e-09 GCGTTTCCCG CCGCTggggtcaggggtcgaggttcgggtc gt chr9:129495929-129496429 - 30 3.22e-09 GGGAGGGTGT ACATCAAGGTCAAAGGTGAGGGGTAGGTGG GGAGAGAAGA chr19:44813525-44814025 - 64 3.76e-09 AAGTGGA GGTCGGAGGTCAGAGGTCAGGATGGGGCTT GTGCGACCAA chr9:137618398-137618898 + 39 3.76e-09 AATCAAAGTG CGTCCGGGGTTAGAGGTCAGAGGTCGGAGC CGCGGGTCTT chr19:50790870-50791370 - 67 5.93e-09 ATCA AGTTTGGGGTCAAATGTCAGAGGCCAGAGG TCTGACTGGA chr3:198173490-198173990 + 43 5.93e-09 tttgggtcaa gggttagggtcaagtgttagggttaggggt taagagttaa chr15:84570843-84571343 - 1 6.88e-09 CGCACCGGGC GCGCGGGGGTGAGAGGTGAGGGGTGAGGGG chr2:27890118-27890618 - 49 7.96e-09 TTACGGGGTC GGGCAAAGGGCAGAGGTCACCGTCCAGGTT GGACAGCAGC chr22:37570329-37570829 - 38 7.96e-09 CCTGTGCTTC AGCCCAGGGTCAGAGGTCAAGGTGAGGTCA AAGGGGGAAA chr6:33204608-33205108 - 21 9.20e-09 GGGGAGGAGA GGGCAGGGATCAGAGGTCACAGGGCAGAAA GTAAAATGTG chr11:64259594-64260094 - 22 1.41e-08 CAGTATGGGT TGAGAGGGGTCATAGGTCAAAGGTAAAGGT CTGCAGTGAT chr1:151165313-151165813 - 16 1.62e-08 TATTTCTAGA GTTCAAAGGTCAGAGGTCAATGTAGCGAGG AGTTGTGGGG chr19:38464627-38465127 + 43 1.86e-08 tagggtcagg gctctggggtcagaggtgaatgtccaggat tgaggagtta chr17:3929734-3930234 - 4 2.13e-08 GAGAGGTCCA GGATTGGGGTCTGGGGTCAAGGGGTTCAGG TTG chr19:48960908-48961408 - 15 2.78e-08 AGTCAAGGTC ACAGTGAGGTCAGGGGTCACTGGGAGGTCA GCAGGGTAGA chr12:131929296-13192979 + 43 3.17e-08 GGCGTCCAGG TCCGAGAGGTCAGGGGTCAGCTGGAGAGGG GCTGGGGCGC chr1:155178825-155179325 - 67 3.17e-08 GCAA AAGCTGAGGGCAGGGGTTGGAGGTCAAGGG AAAGGAAGTG chr2:131803162-131803662 + 6 3.17e-08 ggggt taagagaggttaggggttagggattagggg ttagggttgg chr11:65551579-65552079 + 31 3.61e-08 TCAGGGTCAA ATATCTGGGTCAGGGGTCAGAGGGTCAGGT GGGAGGTCAG chr19:58557940-58558440 - 13 3.61e-08 GTAATGCGGT TGCTGAGGGTCAGAGGTGAAGGGCCCCGAG CGTGGGGGGG chr1:226186516-226187016 - 7 3.61e-08 CGGTGTCGGT AAGCGGAGGTCAGAGGTCAGCAGGAAGTCG ATACGT chr19:17309611-17310111 - 37 4.11e-08 CTTGGTATCC TGGATGGGGTCAGGGGTCGGAGAAGGAGTG GCAGTGGGAT chr16:19536-20036 - 21 4.67e-08 AGTCAGGGTC AGGGTGAGGGTCAGGGTCAGGGTCAGGGTG AGGGTCAGGG chr19:48596174-48596674 - 55 4.67e-08 GCAGAGGTCA CAGCCGGGGGCAGAGGTCACAGTGGGGGGC AGAGGTCACA chr11:62771356-62771856 - 46 5.30e-08 GGTGCGCGGG GGGAGGAGGTCAGGGGTCACTGAACTTGGG TCACGTGGTC chr1:27348760-27349260 - 29 6.01e-08 GTCAAAGGTC ATATTGGGGTCAGAGGTCATAGGGCTCCAG CCAGCTACCC chr17:4559078-4559578 + 41 6.01e-08 TTGGGGTTGC AGTCTGGGGTCAGGGGTCACTGACCTAGCC CCGTGGCATG chr7:47979472-47979972 + 36 6.81e-08 CGCCCTAGAG GAGGTGGGGTCACGGGTCAAGGATCACAGG TCACGCCCCG chr19:56148901-56149401 - 8 9.82e-08 AGGAGTGATG GGGATGGAAGCAGAGGTCAAGGTCAGAGGA GTGATGG chr19:33247320-33247820 - 22 9.82e-08 GTCACTGTGT GTGGCCAGGTCAGAGGTCAAAGATTTGCTG ACAGCAGTCT chr19:50678331-50678831 + 21 1.25e-07 AAGGGACCAG GGTGATGGGGGAGAGGTCAGGATGACAGGG AAGGGTCAGG chr17:50048930-50049430 + 36 1.25e-07 TGCTGCCACC CTAGAAAGGTCAGAGGGCAAGGGGCCAAAG TTGACCATAG chr1:35769973-35770473 - 23 1.58e-07 CTCGATGCTT TGGCAAGTGTCAAAGGTCAAAGACCACGGC TCGCCTGGTA chr10:78029082-78029582 - 13 1.98e-07 TGAGAAATAG GGCAAGGGGTCCGAGGTCAGCGGTCCCGGG TCTTGCAGGG chr22:29388126-29388626 - 34 1.98e-07 GCCAGGAGAA GAAGTGGGGCGAGGGGTCAGGGGTCCTAGG TGAGGGGTTT chr5:49421-49921 + 8 2.49e-07 ccgggtt agggtcagggttagggtcagggtcagggta cagcacttcc chr1:232950436-232950936 - 40 2.49e-07 GCCATACTGG TGGGCGGGGGTAGGGGTTGCGGTCAGGGGA GCAGTCCAGG chr6:33295734-33296234 + 66 2.49e-07 GGGTCAGGGG GCATAGGGGCCAGAGGTCAGGGTCTCACCG CATCT chr6:33170994-33171494 + 26 2.49e-07 AGATCAGGTG GGACTGAGGTTAAAGGCCAGGAGGTCAGAA GTCAAGGTCA chr6:157147224-157147724 - 59 2.49e-07 CCGGAGGCGG GGGTGAGGGACGGAGGTCAGGGTCGGAGGC GGAGGTGAGG chr6:167735002-167735502 - 14 3.11e-07 GGAAGGTCAA TGGCGGAGGTCAGAGGGGGAGGTCAGCGGC AGAGGTCGGC chr6:33677706-33678206 - 20 3.11e-07 AAGGTAAGGA AGCTGAGGGTCAAAGGTTGAGATGAAGCTG AGATTATCAG chr19:40612052-40612552 - 56 3.86e-07 GTTGTGGTCC AGGTCAGGGTCAGGAGTCACAGGCTCTGGG GACTGAGGGA chr9:35490147-35490647 - 12 4.30e-07 CTGAAGGGTC AGGAGAAGGCCAAGGGTCAGAAGGGCTGGG GACGAGGTCT chr19:45348999-45349499 - 40 4.30e-07 TCTAACGGGA TTACCAAGGTCAGAGGTCATGGTGGTCCAG AAACGTGGGG chr19:40612257-40612757 - 35 4.30e-07 TTAGTGGTTA TGATTAGGGTCAAATGTCACAGTCAAATTC AGGAGTTATA chr19:50415950-50416450 - 23 4.79e-07 TCAGGTCACC ACGGAAGGGTCAGAGTTCACAAGGGGAAGC AAGGATGAGG chr19:50406345-50406845 - 20 4.79e-07 TGGGGGCGTG AAGTTGAGGTCAGAGGCCGGGGAAGGGTGA GGTGGAGGTC chr17:7836673-7837173 - 48 5.32e-07 GACTGGAACT GGACTCGGGGCAGAGGTGGGAGGGAATAGA AGGGGGAGGA chr19:13101601-13102101 - 50 7.28e-07 TGGGGTCAGT GTTTGGGGGTCTAGGGTCAGCATTTGAGGT CATAGTGTCA chr19:35889342-35889842 + 13 8.06e-07 GTCACATCTG AGGTCAGGACCCAAGGTTAGGGGCAGGGGG TAGGAGGTCA chr19:48444277-48444777 - 43 8.92e-07 GGGGTGTCAC GGTTTGATGTCAAGGGTCACAGTCTGGTCG GGGCACAGTC chr19:5696548-5697048 + 20 8.92e-07 CTGTGGGTGC ACAGCGGGGTCAGAGGTCACTTGGTAGCCT GGCTCGGCCA chr8:144103777-144104277 + 60 1.09e-06 TAGAGCTGGT CTTTGGGGGCGAAGGGTCAGGGGGCGAAGC ACCGGCCACA chr21:45318804-45319304 + 11 1.09e-06 CTTCAGAGCC AGGCCAAGGTCAAAGGGCACCGGACGCCGG TCCCTCCTCA chr15:57306503-57307003 - 62 1.09e-06 GCGCCCCGG CGCTGGAGGTGAGAGGCCGAGGACCGGGGC GCGGGATCAC chr19:1020424-1020924 + 56 1.20e-06 CTCGCTGTCC CCAGCggggccaggggtcgcggtcggaggt agcagacttg chr19:11400849-11401349 + 16 1.47e-06 TTGGGGTCAG AGAGTCAGATGAGGGGTCATGAATAAGGTC ATGGGTCAGA chr19:14030998-14031498 - 1 1.61e-06 AACGCATGGT TAGGGCTGGGGAGAGGTCAGGGGTCAGGAT chr17:79991986-79992486 - 26 1.61e-06 GCCAAGAACA GCAGCGGAGTGTGGGGTCAGGGGCCCAGCG GGGGGCACCC chr7:159013209-159013709 + 34 1.78e-06 ggtcgggttg ggagtcaaggttggggtcagggtcaaggtt gggatggggt chr17:82065712-82066212 + 5 1.78e-06 gcgg ggtcggaggtcagaggctgaggtcaCCACC GTACCCGTCA chr19:727090-727590 - 12 2.15e-06 GGTCAGGGTC AGAGTCAGGACTGAGATCAGGGTCAGGGTC GGGGTCAGGG chr17:82586128-82586628 + 53 2.15e-06 AGGGGAGACC ACAGGGAGGTGAAAGGTGGGCGGGGGGGAA AGGAGGAGAG chr19:34134439-34134939 - 53 2.15e-06 GCGCGCAGGA GGGTCCGGGGCAGGGGCCGGGAAGACTGGG CAGATAAGAG chr6:44145769-44146269 + 55 2.36e-06 CAGGTCAGTC TCACCCTGGTCAGGGGTCAGGATCAATCTC TTGTCTGTCT chr20:38033507-38034007 + 24 2.36e-06 CCTCGCTCTC GCGGCAGGGTGAGAGGTCGGGTGGCCATCT TGTGGCGGCG chr9:137221523-137222023 - 47 2.36e-06 TCCTTTGTGC AGGGCGAGGGCTAGGGTGGGGGTGGCCGGG GCACTGCCCT chr17:81711651-81712151 + 25 2.36e-06 GGCTGAGCCC TCGGTGGGGGCAGGGGTTGCAGACCTGTGG ACGCAGGGCC chr6:27671973-27672473 - 34 2.59e-06 ACGGGCGGAT CATTTGAGGTCAGGGGTTGGAGACCAGCCT GACCAACACG chr19:34175082-34175582 - 16 2.59e-06 AATTGCTTGA ACTTGGAAGGCAGAGGTTACAGGGAGCCAG GATTGTGCCA chr17:8294738-8295238 + 10 2.59e-06 CAGTCAAGG GTGTCAGGGTCAAATGTCAAGTGGTCAAAC GTCAGCTGGA chr19:37210019-37210519 - 10 2.84e-06 TGGGGGTCAG TGACGGGAGTCTGTGGTCAGTGACTGAGGG CCTGTAGGG chr1:2146902-2147402 - 55 3.11e-06 AGACGGTTGG ATGGAGAGGTCAGTGGACAATAGACGGATA GACGGAGAGG chr1:2147756-2148256 - 49 3.41e-06 GGATGGATAG ATGGAGAGGTCAGTGGACAATAGATGGATG GATAGATGGA chr19:33797048-33797548 - 65 3.41e-06 GGCGCT CGGCCCAGAACAGGGGCCAGAGTGCGGGGA CCTCCACAAG chr1:2147955-2148455 - 17 3.73e-06 AGACGGAAAG ATGGAGAGGTCAGTGGACAACAGACAGATG GGTGGACAGG chr17:47970976-47971476 - 12 3.73e-06 TTCCGGAGGG AGACCGGAGACACAGGTTAGGGGTCCGCGG CCAGTCCCCA chr17:44503316-44503816 - 41 4.08e-06 GCTCCGGGTC GCGCGCGGAGCAGGGGCTAGAGGGAAGGGT CAGCCTCCAG chr17:4810844-4811344 - 35 4.45e-06 ATCAATGTGG TTAAAGATGTCAAAGGTCAGGAAGATTAAA GAAGTCACGG chr19:2432433-2432933 - 69 4.45e-06 TG ATGGGGGTGACCAGGGTCAGGGTGACAGGG CCGCCGGTCA chr21:43810245-43810745 - 16 4.45e-06 TGGGGAGAGG CCGCAGGGGGGAGAGGTCACATGGGGCAGA GGCCACGCGG chr19:40750067-40750567 + 16 4.86e-06 CTTTGAGCTG ACCTTTGAGTCAGAGGTCAAGAGGTCAAAA AGGACACCTG chr7:73522234-73522734 + 17 4.86e-06 AGAGGGCAGT CTGAAGAGGTGAAAGGTCACGTTATGTAAG CGCCCGTGAT chr1:974695-975195 + 71 5.31e-06 AGGTCAGAGG GCATGAGGGTCACAGGTCAGCAAGGTGTGA chr19:38518407-38518907 + 26 5.31e-06 atgctagtta agggtgaggtaacaggccaggtgcagtggc tcacgcctgt chr5:149551536-149552036 - 64 5.79e-06 ACGGCCA GAAGAAAGATCAAAGGTTAAAAACCGCCTC AAAGAGCACA chr17:6470610-6471110 + 71 5.79e-06 GCTCTGATTT GAGGCAGGGTCAGAGTTCAGGGCTCTGTCC chr3:14947397-14947897 - 33 6.31e-06 TGTTTTTGTC AGTGAAAGGTCAGAGTTCGTGACCCCGGTG CCGCCGCCGC chr3:128726305-128726805 + 31 6.87e-06 CCCACCCGGC TTGGAGAGGTCGGAGGTCGTCGGGCGTGAC CTCTGGCCGG chr19:1173455-1173955 + 4 8.13e-06 TCC CAGGAAGGGGTCGAGGTCACGAGGCGCATG GAGTCGAGAG chr5:173057137-173057637 + 6 8.13e-06 GGGGA GGAGACAGGGCAAAGGGCGAGGGAGCCGGG CCGGGGGTGT chr19:3573197-3573697 - 1 8.84e-06 TCCGGCGGGA GGGACTGGGTCAGGGGTTCAGGAGCTAGGG chr19:5903983-5904483 + 59 8.84e-06 TTTTGGGCCG TGGACAGGATCAGGGGCGGGGATTATCGGG AAAGTGACCA chr1:1307132-1307632 + 60 8.84e-06 CTCTGGACAC AGGATCAAGTCAGAGACCAGGGGCCGACGC CCCCACGGAC chr5:396964-397464 - 48 1.04e-05 TCAGGGGCTA CGTGGATGGTCAGGGGCTACGTGGATGGTC AGGGGCTATG chr5:397752-398252 - 24 1.04e-05 TCAGGGGCTA CGTGGATGGTCAGGGGCTACGTGGATGGTC AGGAGCTATG chr13:75482302-75482802 - 49 1.04e-05 CTGAGCTGCA GCCCCAAGGGCGGGGGTCGAAGGAAGAGGC GAAGAGGCGG chr19:11402130-11402630 + 37 1.23e-05 GTCAGGAGTA CAGGTAGGATCAAGGGTGGATATTGGGAGG CCCATTGTGC chr19:36214986-36215486 + 41 1.23e-05 GTCGGTCGGA CCGGGGAGGTTAAAGGGGAGGATTCCTGAT CTTTAGGGGC chr14:22982590-22983090 + 35 1.33e-05 GAATTGGAAT AGGAAAGAGTGTGGGGGTAGGGGACGGGGA CTCTTTGTCT chr1:43389735-43390235 + 53 1.56e-05 GAGCGCCCGG AGCCGGAGGTGAGGGGCGGGCGGGCGCAGC ACTGGGCCCC chr12:123232739-12323323 - 10 1.68e-05 GTGTGGTGAT GGGCTGGGGTGTGGGGTGACGGCTGCCGAT TGGCCTGAC chr1:154353400-154353900 - 68 2.12e-05 CCA ACATGAAGGTCAAAGGTGATTTTAGTGAAA GCATTTCAGG chr1:227791310-227791810 - 29 2.29e-05 GGTTAGAGTT AGGGTCAAGTTCATGGTCAGTGTTAGTGTT ACGATCAGGT chr8:37701079-37701579 + 9 2.47e-05 TTTTGAAA CGTCTGTGGCCCGAGGTCAAGTGCAGTGCG TAGGATGGGG chr19:55517255-55517755 - 69 3.09e-05 GG TGGGTAAGGGCGTGGGTGAGGGCTCCGGGG TCAACGCGGG chr17:314580-315080 - 24 3.57e-05 TGGAGGTGGA GCACAGAGACTACAGGTCAATGGACGTGGA GTACAGGGAC chr6:37819256-37819756 + 22 5.09e-05 GGTCAGCGCA GCCTCCGGGGGAGGGGACGGTGTTACGGAG ACAGCAGGGC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RGRBNRRGGTCAGRGGTCAGGGKBMVGGGS MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrX:156019633-156020133 7.4e-13 54_[+1]_16 chr22:46762618-46763118 4.2e-12 51_[+1]_19 chr1:1239705-1240205 1.9e-11 49_[+1]_21 chr19:19634170-19634670 1.9e-11 34_[+1]_36 chr3:198173990-198174490 3.8e-11 22_[+1]_48 chr22:50705039-50705539 7.3e-11 61_[-1]_9 chr7:4641733-4642233 1.6e-10 49_[+1]_21 chr19:10252256-10252756 2e-10 55_[-1]_15 chr17:42117628-42118128 2.4e-10 43_[+1]_27 chr2:218568520-218569020 3.5e-10 69_[+1]_1 chr1:26189281-26189781 4.3e-10 46_[-1]_24 chr4:190122275-190122775 4.3e-10 34_[+1]_36 chrX:1392315-1392815 8.7e-10 44_[-1]_26 chr19:42349668-42350168 8.7e-10 67_[-1]_3 chr21:43776506-43777006 8.7e-10 24_[+1]_46 chr17:50113562-50114062 1.7e-09 67_[+1]_3 chr16:689436-689936 2e-09 14_[+1]_56 chr4:705073-705573 2.3e-09 46_[-1]_24 chr11:64259391-64259891 2.3e-09 29_[-1]_41 chr22:20117215-20117715 3.2e-09 68_[+1]_2 chr9:129495929-129496429 3.2e-09 29_[-1]_41 chr19:44813525-44814025 3.8e-09 63_[-1]_7 chr9:137618398-137618898 3.8e-09 38_[+1]_32 chr19:50790870-50791370 5.9e-09 66_[-1]_4 chr3:198173490-198173990 5.9e-09 42_[+1]_28 chr15:84570843-84571343 6.9e-09 [-1]_70 chr2:27890118-27890618 8e-09 48_[-1]_22 chr22:37570329-37570829 8e-09 37_[-1]_33 chr6:33204608-33205108 9.2e-09 20_[-1]_50 chr11:64259594-64260094 1.4e-08 21_[-1]_49 chr1:151165313-151165813 1.6e-08 15_[-1]_55 chr19:38464627-38465127 1.9e-08 42_[+1]_28 chr17:3929734-3930234 2.1e-08 3_[-1]_67 chr19:48960908-48961408 2.8e-08 14_[-1]_56 chr12:131929296-13192979 3.2e-08 42_[+1]_28 chr1:155178825-155179325 3.2e-08 66_[-1]_4 chr2:131803162-131803662 3.2e-08 5_[+1]_65 chr11:65551579-65552079 3.6e-08 30_[+1]_40 chr19:58557940-58558440 3.6e-08 12_[-1]_58 chr1:226186516-226187016 3.6e-08 6_[-1]_64 chr19:17309611-17310111 4.1e-08 36_[-1]_34 chr16:19536-20036 4.7e-08 20_[-1]_50 chr19:48596174-48596674 4.7e-08 54_[-1]_16 chr11:62771356-62771856 5.3e-08 45_[-1]_25 chr1:27348760-27349260 6e-08 28_[-1]_42 chr17:4559078-4559578 6e-08 40_[+1]_30 chr7:47979472-47979972 6.8e-08 35_[+1]_35 chr19:56148901-56149401 9.8e-08 7_[-1]_63 chr19:33247320-33247820 9.8e-08 21_[-1]_49 chr19:50678331-50678831 1.2e-07 20_[+1]_50 chr17:50048930-50049430 1.2e-07 35_[+1]_35 chr1:35769973-35770473 1.6e-07 22_[-1]_48 chr10:78029082-78029582 2e-07 12_[-1]_58 chr22:29388126-29388626 2e-07 33_[-1]_37 chr5:49421-49921 2.5e-07 7_[+1]_63 chr1:232950436-232950936 2.5e-07 39_[-1]_31 chr6:33295734-33296234 2.5e-07 65_[+1]_5 chr6:33170994-33171494 2.5e-07 25_[+1]_45 chr6:157147224-157147724 2.5e-07 58_[-1]_12 chr6:167735002-167735502 3.1e-07 13_[-1]_57 chr6:33677706-33678206 3.1e-07 19_[-1]_51 chr19:40612052-40612552 3.9e-07 55_[-1]_15 chr9:35490147-35490647 4.3e-07 11_[-1]_59 chr19:45348999-45349499 4.3e-07 39_[-1]_31 chr19:40612257-40612757 4.3e-07 34_[-1]_36 chr19:50415950-50416450 4.8e-07 22_[-1]_48 chr19:50406345-50406845 4.8e-07 19_[-1]_51 chr17:7836673-7837173 5.3e-07 47_[-1]_23 chr19:13101601-13102101 7.3e-07 49_[-1]_21 chr19:35889342-35889842 8.1e-07 12_[+1]_58 chr19:48444277-48444777 8.9e-07 42_[-1]_28 chr19:5696548-5697048 8.9e-07 19_[+1]_51 chr8:144103777-144104277 1.1e-06 59_[+1]_11 chr21:45318804-45319304 1.1e-06 10_[+1]_60 chr15:57306503-57307003 1.1e-06 61_[-1]_9 chr19:1020424-1020924 1.2e-06 55_[+1]_15 chr19:11400849-11401349 1.5e-06 15_[+1]_55 chr19:14030998-14031498 1.6e-06 [-1]_70 chr17:79991986-79992486 1.6e-06 25_[-1]_45 chr7:159013209-159013709 1.8e-06 33_[+1]_37 chr17:82065712-82066212 1.8e-06 4_[+1]_66 chr19:727090-727590 2.1e-06 11_[-1]_59 chr17:82586128-82586628 2.1e-06 52_[+1]_18 chr19:34134439-34134939 2.1e-06 52_[-1]_18 chr6:44145769-44146269 2.4e-06 54_[+1]_16 chr20:38033507-38034007 2.4e-06 23_[+1]_47 chr9:137221523-137222023 2.4e-06 46_[-1]_24 chr17:81711651-81712151 2.4e-06 24_[+1]_46 chr6:27671973-27672473 2.6e-06 33_[-1]_37 chr19:34175082-34175582 2.6e-06 15_[-1]_55 chr17:8294738-8295238 2.6e-06 9_[+1]_61 chr19:37210019-37210519 2.8e-06 9_[-1]_61 chr1:2146902-2147402 3.1e-06 54_[-1]_16 chr1:2147756-2148256 3.4e-06 48_[-1]_22 chr19:33797048-33797548 3.4e-06 64_[-1]_6 chr1:2147955-2148455 3.7e-06 16_[-1]_54 chr17:47970976-47971476 3.7e-06 11_[-1]_59 chr17:44503316-44503816 4.1e-06 40_[-1]_30 chr17:4810844-4811344 4.5e-06 34_[-1]_36 chr19:2432433-2432933 4.5e-06 68_[-1]_2 chr21:43810245-43810745 4.5e-06 15_[-1]_55 chr19:40750067-40750567 4.9e-06 15_[+1]_55 chr7:73522234-73522734 4.9e-06 16_[+1]_54 chr1:974695-975195 5.3e-06 70_[+1] chr19:38518407-38518907 5.3e-06 25_[+1]_45 chr5:149551536-149552036 5.8e-06 63_[-1]_7 chr17:6470610-6471110 5.8e-06 70_[+1] chr3:14947397-14947897 6.3e-06 32_[-1]_38 chr3:128726305-128726805 6.9e-06 30_[+1]_40 chr19:1173455-1173955 8.1e-06 3_[+1]_67 chr5:173057137-173057637 8.1e-06 5_[+1]_65 chr19:3573197-3573697 8.8e-06 [-1]_70 chr19:5903983-5904483 8.8e-06 58_[+1]_12 chr1:1307132-1307632 8.8e-06 59_[+1]_11 chr5:396964-397464 1e-05 47_[-1]_23 chr5:397752-398252 1e-05 23_[-1]_47 chr13:75482302-75482802 1e-05 48_[-1]_22 chr19:11402130-11402630 1.2e-05 36_[+1]_34 chr19:36214986-36215486 1.2e-05 40_[+1]_30 chr14:22982590-22983090 1.3e-05 34_[+1]_36 chr1:43389735-43390235 1.6e-05 52_[+1]_18 chr12:123232739-12323323 1.7e-05 9_[-1]_61 chr1:154353400-154353900 2.1e-05 67_[-1]_3 chr1:227791310-227791810 2.3e-05 28_[-1]_42 chr8:37701079-37701579 2.5e-05 8_[+1]_62 chr19:55517255-55517755 3.1e-05 68_[-1]_2 chr17:314580-315080 3.6e-05 23_[-1]_47 chr6:37819256-37819756 5.1e-05 21_[+1]_49 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RGRBNRRGGTCAGRGGTCAGGGKBMVGGGS MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF RGRBNRRGGTCAGRGGTCAGGGKBMVGGGS width=30 seqs=128 chrX:156019633-156020133 ( 55) GGGTCAGGGTCAGGGGTCAGGGTCAGGGTG 1 chr22:46762618-46763118 ( 52) AGGTCGGGGTCAGGGGTCAGAGGTCAGGTG 1 chr1:1239705-1240205 ( 50) GGTCAAGGGTCAGGGGTCAGGGGTCGGGTT 1 chr19:19634170-19634670 ( 35) GGTCAAAGGTCAGAGGTCAGTGTCAGGGGT 1 chr3:198173990-198174490 ( 23) GGGTTAGGGTCAAGGGTTAGGGTTAGGGGT 1 chr22:50705039-50705539 ( 62) AGCCTGAGGTCAGGGGTCAGGGGTCAAAGG 1 chr7:4641733-4642233 ( 50) GGTCGGAGGTCAGAGGTCAGCGGGCGCGGG 1 chr19:10252256-10252756 ( 56) TTGCGGGGGTCAGAGGTTAGGGTCAAGGGT 1 chr17:42117628-42118128 ( 44) GAATGAGGGTCAGAGGTCAGGGGTCAAGTA 1 chr2:218568520-218569020 ( 70) TGGGTGGGGTCAGGGGTGAGAGGTCAGAGG 1 chr1:26189281-26189781 ( 47) TGGCCAGGGTCAGAGGTCAGGAGGTCGGAG 1 chr4:190122275-190122775 ( 35) GGGTTAGGGTTAGGGGTTAGGGTCAGGGTC 1 chrX:1392315-1392815 ( 45) GGTCAAGGGTCAAGGGTCGGGGGTCGGGGC 1 chr19:42349668-42350168 ( 68) GTATGGAGGGCAGAGGTCAGGGTCAGCAGG 1 chr21:43776506-43777006 ( 25) CTGCAGGGGTCAGGGGTCAGGGGTCCCGGC 1 chr17:50113562-50114062 ( 68) GGCTGAGGGTCAAAGGTCAGGATGAGGGAC 1 chr16:689436-689936 ( 15) GTGATGAGGTCAGGGGTCAGGAGGTCAGTG 1 chr4:705073-705573 ( 47) GGGTCAGGGTTAGGGGTTAGAGTCAGGGTT 1 chr11:64259391-64259891 ( 30) AGTCAGGGGTGAGAGGTCAGAGGTCAGCTG 1 chr22:20117215-20117715 ( 69) CCGCTGGGGTCAGGGGTCGAGGTTCGGGTC 1 chr9:129495929-129496429 ( 30) ACATCAAGGTCAAAGGTGAGGGGTAGGTGG 1 chr19:44813525-44814025 ( 64) GGTCGGAGGTCAGAGGTCAGGATGGGGCTT 1 chr9:137618398-137618898 ( 39) CGTCCGGGGTTAGAGGTCAGAGGTCGGAGC 1 chr19:50790870-50791370 ( 67) AGTTTGGGGTCAAATGTCAGAGGCCAGAGG 1 chr3:198173490-198173990 ( 43) GGGTTAGGGTCAAGTGTTAGGGTTAGGGGT 1 chr15:84570843-84571343 ( 1) GCGCGGGGGTGAGAGGTGAGGGGTGAGGGG 1 chr2:27890118-27890618 ( 49) GGGCAAAGGGCAGAGGTCACCGTCCAGGTT 1 chr22:37570329-37570829 ( 38) AGCCCAGGGTCAGAGGTCAAGGTGAGGTCA 1 chr6:33204608-33205108 ( 21) GGGCAGGGATCAGAGGTCACAGGGCAGAAA 1 chr11:64259594-64260094 ( 22) TGAGAGGGGTCATAGGTCAAAGGTAAAGGT 1 chr1:151165313-151165813 ( 16) GTTCAAAGGTCAGAGGTCAATGTAGCGAGG 1 chr19:38464627-38465127 ( 43) GCTCTGGGGTCAGAGGTGAATGTCCAGGAT 1 chr17:3929734-3930234 ( 4) GGATTGGGGTCTGGGGTCAAGGGGTTCAGG 1 chr19:48960908-48961408 ( 15) ACAGTGAGGTCAGGGGTCACTGGGAGGTCA 1 chr12:131929296-13192979 ( 43) TCCGAGAGGTCAGGGGTCAGCTGGAGAGGG 1 chr1:155178825-155179325 ( 67) AAGCTGAGGGCAGGGGTTGGAGGTCAAGGG 1 chr2:131803162-131803662 ( 6) TAAGAGAGGTTAGGGGTTAGGGATTAGGGG 1 chr11:65551579-65552079 ( 31) ATATCTGGGTCAGGGGTCAGAGGGTCAGGT 1 chr19:58557940-58558440 ( 13) TGCTGAGGGTCAGAGGTGAAGGGCCCCGAG 1 chr1:226186516-226187016 ( 7) AAGCGGAGGTCAGAGGTCAGCAGGAAGTCG 1 chr19:17309611-17310111 ( 37) TGGATGGGGTCAGGGGTCGGAGAAGGAGTG 1 chr16:19536-20036 ( 21) AGGGTGAGGGTCAGGGTCAGGGTCAGGGTG 1 chr19:48596174-48596674 ( 55) CAGCCGGGGGCAGAGGTCACAGTGGGGGGC 1 chr11:62771356-62771856 ( 46) GGGAGGAGGTCAGGGGTCACTGAACTTGGG 1 chr1:27348760-27349260 ( 29) ATATTGGGGTCAGAGGTCATAGGGCTCCAG 1 chr17:4559078-4559578 ( 41) AGTCTGGGGTCAGGGGTCACTGACCTAGCC 1 chr7:47979472-47979972 ( 36) GAGGTGGGGTCACGGGTCAAGGATCACAGG 1 chr19:56148901-56149401 ( 8) GGGATGGAAGCAGAGGTCAAGGTCAGAGGA 1 chr19:33247320-33247820 ( 22) GTGGCCAGGTCAGAGGTCAAAGATTTGCTG 1 chr19:50678331-50678831 ( 21) GGTGATGGGGGAGAGGTCAGGATGACAGGG 1 chr17:50048930-50049430 ( 36) CTAGAAAGGTCAGAGGGCAAGGGGCCAAAG 1 chr1:35769973-35770473 ( 23) TGGCAAGTGTCAAAGGTCAAAGACCACGGC 1 chr10:78029082-78029582 ( 13) GGCAAGGGGTCCGAGGTCAGCGGTCCCGGG 1 chr22:29388126-29388626 ( 34) GAAGTGGGGCGAGGGGTCAGGGGTCCTAGG 1 chr5:49421-49921 ( 8) AGGGTCAGGGTTAGGGTCAGGGTCAGGGTA 1 chr1:232950436-232950936 ( 40) TGGGCGGGGGTAGGGGTTGCGGTCAGGGGA 1 chr6:33295734-33296234 ( 66) GCATAGGGGCCAGAGGTCAGGGTCTCACCG 1 chr6:33170994-33171494 ( 26) GGACTGAGGTTAAAGGCCAGGAGGTCAGAA 1 chr6:157147224-157147724 ( 59) GGGTGAGGGACGGAGGTCAGGGTCGGAGGC 1 chr6:167735002-167735502 ( 14) TGGCGGAGGTCAGAGGGGGAGGTCAGCGGC 1 chr6:33677706-33678206 ( 20) AGCTGAGGGTCAAAGGTTGAGATGAAGCTG 1 chr19:40612052-40612552 ( 56) AGGTCAGGGTCAGGAGTCACAGGCTCTGGG 1 chr9:35490147-35490647 ( 12) AGGAGAAGGCCAAGGGTCAGAAGGGCTGGG 1 chr19:45348999-45349499 ( 40) TTACCAAGGTCAGAGGTCATGGTGGTCCAG 1 chr19:40612257-40612757 ( 35) TGATTAGGGTCAAATGTCACAGTCAAATTC 1 chr19:50415950-50416450 ( 23) ACGGAAGGGTCAGAGTTCACAAGGGGAAGC 1 chr19:50406345-50406845 ( 20) AAGTTGAGGTCAGAGGCCGGGGAAGGGTGA 1 chr17:7836673-7837173 ( 48) GGACTCGGGGCAGAGGTGGGAGGGAATAGA 1 chr19:13101601-13102101 ( 50) GTTTGGGGGTCTAGGGTCAGCATTTGAGGT 1 chr19:35889342-35889842 ( 13) AGGTCAGGACCCAAGGTTAGGGGCAGGGGG 1 chr19:48444277-48444777 ( 43) GGTTTGATGTCAAGGGTCACAGTCTGGTCG 1 chr19:5696548-5697048 ( 20) ACAGCGGGGTCAGAGGTCACTTGGTAGCCT 1 chr8:144103777-144104277 ( 60) CTTTGGGGGCGAAGGGTCAGGGGGCGAAGC 1 chr21:45318804-45319304 ( 11) AGGCCAAGGTCAAAGGGCACCGGACGCCGG 1 chr15:57306503-57307003 ( 62) CGCTGGAGGTGAGAGGCCGAGGACCGGGGC 1 chr19:1020424-1020924 ( 56) CCAGCGGGGCCAGGGGTCGCGGTCGGAGGT 1 chr19:11400849-11401349 ( 16) AGAGTCAGATGAGGGGTCATGAATAAGGTC 1 chr19:14030998-14031498 ( 1) TAGGGCTGGGGAGAGGTCAGGGGTCAGGAT 1 chr17:79991986-79992486 ( 26) GCAGCGGAGTGTGGGGTCAGGGGCCCAGCG 1 chr7:159013209-159013709 ( 34) GGAGTCAAGGTTGGGGTCAGGGTCAAGGTT 1 chr17:82065712-82066212 ( 5) GGTCGGAGGTCAGAGGCTGAGGTCACCACC 1 chr19:727090-727590 ( 12) AGAGTCAGGACTGAGATCAGGGTCAGGGTC 1 chr17:82586128-82586628 ( 53) ACAGGGAGGTGAAAGGTGGGCGGGGGGGAA 1 chr19:34134439-34134939 ( 53) GGGTCCGGGGCAGGGGCCGGGAAGACTGGG 1 chr6:44145769-44146269 ( 55) TCACCCTGGTCAGGGGTCAGGATCAATCTC 1 chr20:38033507-38034007 ( 24) GCGGCAGGGTGAGAGGTCGGGTGGCCATCT 1 chr9:137221523-137222023 ( 47) AGGGCGAGGGCTAGGGTGGGGGTGGCCGGG 1 chr17:81711651-81712151 ( 25) TCGGTGGGGGCAGGGGTTGCAGACCTGTGG 1 chr6:27671973-27672473 ( 34) CATTTGAGGTCAGGGGTTGGAGACCAGCCT 1 chr19:34175082-34175582 ( 16) ACTTGGAAGGCAGAGGTTACAGGGAGCCAG 1 chr17:8294738-8295238 ( 10) GTGTCAGGGTCAAATGTCAAGTGGTCAAAC 1 chr19:37210019-37210519 ( 10) TGACGGGAGTCTGTGGTCAGTGACTGAGGG 1 chr1:2146902-2147402 ( 55) ATGGAGAGGTCAGTGGACAATAGACGGATA 1 chr1:2147756-2148256 ( 49) ATGGAGAGGTCAGTGGACAATAGATGGATG 1 chr19:33797048-33797548 ( 65) CGGCCCAGAACAGGGGCCAGAGTGCGGGGA 1 chr1:2147955-2148455 ( 17) ATGGAGAGGTCAGTGGACAACAGACAGATG 1 chr17:47970976-47971476 ( 12) AGACCGGAGACACAGGTTAGGGGTCCGCGG 1 chr17:44503316-44503816 ( 41) GCGCGCGGAGCAGGGGCTAGAGGGAAGGGT 1 chr17:4810844-4811344 ( 35) TTAAAGATGTCAAAGGTCAGGAAGATTAAA 1 chr19:2432433-2432933 ( 69) ATGGGGGTGACCAGGGTCAGGGTGACAGGG 1 chr21:43810245-43810745 ( 16) CCGCAGGGGGGAGAGGTCACATGGGGCAGA 1 chr19:40750067-40750567 ( 16) ACCTTTGAGTCAGAGGTCAAGAGGTCAAAA 1 chr7:73522234-73522734 ( 17) CTGAAGAGGTGAAAGGTCACGTTATGTAAG 1 chr1:974695-975195 ( 71) GCATGAGGGTCACAGGTCAGCAAGGTGTGA 1 chr19:38518407-38518907 ( 26) AGGGTGAGGTAACAGGCCAGGTGCAGTGGC 1 chr5:149551536-149552036 ( 64) GAAGAAAGATCAAAGGTTAAAAACCGCCTC 1 chr17:6470610-6471110 ( 71) GAGGCAGGGTCAGAGTTCAGGGCTCTGTCC 1 chr3:14947397-14947897 ( 33) AGTGAAAGGTCAGAGTTCGTGACCCCGGTG 1 chr3:128726305-128726805 ( 31) TTGGAGAGGTCGGAGGTCGTCGGGCGTGAC 1 chr19:1173455-1173955 ( 4) CAGGAAGGGGTCGAGGTCACGAGGCGCATG 1 chr5:173057137-173057637 ( 6) GGAGACAGGGCAAAGGGCGAGGGAGCCGGG 1 chr19:3573197-3573697 ( 1) GGGACTGGGTCAGGGGTTCAGGAGCTAGGG 1 chr19:5903983-5904483 ( 59) TGGACAGGATCAGGGGCGGGGATTATCGGG 1 chr1:1307132-1307632 ( 60) AGGATCAAGTCAGAGACCAGGGGCCGACGC 1 chr5:396964-397464 ( 48) CGTGGATGGTCAGGGGCTACGTGGATGGTC 1 chr5:397752-398252 ( 24) CGTGGATGGTCAGGGGCTACGTGGATGGTC 1 chr13:75482302-75482802 ( 49) GCCCCAAGGGCGGGGGTCGAAGGAAGAGGC 1 chr19:11402130-11402630 ( 37) CAGGTAGGATCAAGGGTGGATATTGGGAGG 1 chr19:36214986-36215486 ( 41) CCGGGGAGGTTAAAGGGGAGGATTCCTGAT 1 chr14:22982590-22983090 ( 35) AGGAAAGAGTGTGGGGGTAGGGGACGGGGA 1 chr1:43389735-43390235 ( 53) AGCCGGAGGTGAGGGGCGGGCGGGCGCAGC 1 chr12:123232739-12323323 ( 10) GGGCTGGGGTGTGGGGTGACGGCTGCCGAT 1 chr1:154353400-154353900 ( 68) ACATGAAGGTCAAAGGTGATTTTAGTGAAA 1 chr1:227791310-227791810 ( 29) AGGGTCAAGTTCATGGTCAGTGTTAGTGTT 1 chr8:37701079-37701579 ( 9) CGTCTGTGGCCCGAGGTCAAGTGCAGTGCG 1 chr19:55517255-55517755 ( 69) TGGGTAAGGGCGTGGGTGAGGGCTCCGGGG 1 chr17:314580-315080 ( 24) GCACAGAGACTACAGGTCAATGGACGTGGA 1 chr6:37819256-37819756 ( 22) GCCTCCGGGGGAGGGGACGGTGTTACGGAG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RGRBNRRGGTCAGRGGTCAGGGKBMVGGGS MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 30 n= 42600 bayes= 9.69876 E= 3.3e-215 56 -104 41 -37 -95 -56 90 -44 24 -162 75 -30 -117 12 19 33 15 -30 -30 49 63 -130 86 -276 99 -1364 90 -244 -144 -1364 163 -276 -144 -1364 168 -1364 -244 -221 -68 176 -476 139 -112 -106 198 -240 -320 -144 15 -288 130 -376 133 -1364 58 -244 -476 -1364 174 -276 -376 -1364 174 -317 -276 -150 -262 195 -1364 130 -121 -37 190 -520 -51 -1364 5 -75 96 -217 10 -162 96 -85 -6 -1364 130 -130 -59 -320 75 70 -95 4 22 28 67 41 -96 -67 5 -35 60 -85 10 -75 75 -85 -1 -130 102 -130 -37 -150 79 15 -44 -35 63 -30 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RGRBNRRGGTCAGRGGTCAGGGKBMVGGGS MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 30 nsites= 128 E= 3.3e-215 0.312500 0.140625 0.382812 0.164062 0.109375 0.195312 0.539062 0.156250 0.250000 0.093750 0.484375 0.171875 0.093750 0.312500 0.328125 0.265625 0.234375 0.234375 0.234375 0.296875 0.328125 0.117188 0.523438 0.031250 0.421875 0.000000 0.539062 0.039062 0.078125 0.000000 0.890625 0.031250 0.078125 0.000000 0.921875 0.000000 0.039062 0.062500 0.179688 0.718750 0.007812 0.757812 0.132812 0.101562 0.835938 0.054688 0.031250 0.078125 0.234375 0.039062 0.710938 0.015625 0.531250 0.000000 0.429688 0.039062 0.007812 0.000000 0.960938 0.031250 0.015625 0.000000 0.960938 0.023438 0.031250 0.101562 0.046875 0.820312 0.000000 0.710938 0.125000 0.164062 0.789062 0.007812 0.203125 0.000000 0.218750 0.171875 0.562500 0.046875 0.226562 0.093750 0.562500 0.117188 0.203125 0.000000 0.710938 0.085938 0.140625 0.031250 0.484375 0.343750 0.109375 0.296875 0.335938 0.257812 0.335938 0.382812 0.148438 0.132812 0.218750 0.226562 0.437500 0.117188 0.226562 0.171875 0.484375 0.117188 0.210938 0.117188 0.585938 0.085938 0.164062 0.101562 0.500000 0.234375 0.156250 0.226562 0.445312 0.171875 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RGRBNRRGGTCAGRGGTCAGGGKBMVGGGS MEME-1 regular expression -------------------------------------------------------------------------------- [GA]G[GA][GCT][TACG][GA][GA]GGTCA[GA][AG]GGTC[AG][GA][GA][GA][GT][GCT][CA][GCA][GA][GA][GT][GC] -------------------------------------------------------------------------------- Time 365.19 secs. ******************************************************************************** ******************************************************************************** MOTIF KTGTGTKTKTKTKTDTDTDTGT MEME-2 width = 22 sites = 76 llr = 916 E-value = 5.5e-073 ******************************************************************************** -------------------------------------------------------------------------------- Motif KTGTGTKTKTKTKTDTDTDTGT MEME-2 Description -------------------------------------------------------------------------------- Simplified A ::2322122:22::31233222 pos.-specific C 1:1:1::::11::2::1:111: probability G 325171414:415:414:3:52 matrix T 6826175749375848373726 bits 2.2 2.0 * 1.8 * 1.6 * Relative 1.3 * * * * Entropy 1.1 * * * * * * (17.4 bits) 0.9 * * * * * *** * * * 0.7 ** * *** * *** * * * * 0.4 ** ******* ***** * * * 0.2 ********************** 0.0 ---------------------- Multilevel TTGTGTTTTTGTGTGTGTTTGT consensus GGAA AG G T T T TAG TA sequence A A A -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif KTGTGTKTKTKTKTDTDTDTGT MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ---------------------- chr19:39320101-39320601 - 21 2.34e-11 GGGTGTCCAT TTGTGTGTGTGTGTGTGTGTGT GTGTGTGTGT chr1:28648550-28649050 + 60 5.10e-11 AAGAGATTCT GTGTGTGTTTTTTTTTTTTTTT AGAGGCTGCA chr17:48252524-48253024 + 14 2.07e-10 gtgtgtgtgt gtgtgtgtgtgtgtgtgtatgt gCTCATGTGT chr15:40092249-40092749 - 6 2.57e-10 GCGCACAAGG GTGTGTGTGTGTGTGTGTGTGT GAGTC chr11:120347010-12034751 + 62 2.57e-10 ctctctGTCt gtgtgtgtgtgtgtgtgtgtgt gtgtgtgtgt chr12:57111962-57112462 - 61 2.57e-10 GTGTGTGTGT GTGTGTGTGTGTGTGTGTGTGT GGTGTTGTGA chr19:33797048-33797548 + 2 2.57e-10 t gtgtgtgtgtgtgtgtgtgtgt gtgtgtgtgt chr7:100478119-100478619 + 34 2.57e-10 gagagagagt gtgtgtgtgtgtgtgtgtgtgt gtgtgtgtgt chr5:125550184-125550684 + 73 2.57e-10 ATAAAAGGgt gtgtgtgtgtgtgtgtgtgtgt gtgtgt chr1:228458414-228458914 + 42 2.57e-10 AATCTGAGCC gtgtgtgtgtgtgtgtgtgtgt gtgtgtgCGC chr2:241881320-241881820 + 75 2.57e-10 GTGGCCCAGC gtgtgtgtgtgtgtgtgtgtgt gtgt chr5:93582538-93583038 + 34 3.91e-10 GTGAGCGTAA gtgtgtgtgtgtgtatgtgtgt gtgtgtgtgA chr5:36241807-36242307 + 58 1.05e-09 AGCTAGTGGG Ttttgtttgtttgtttattcgt ttCACTCACG chr7:133478510-133479010 + 48 6.08e-09 TATTCTTTGC TTAAGAGTTTATTTATTTTTTT TCTTTGCCGT chr6:43321935-43322435 - 33 2.10e-08 TTTTGAAGTG TTGTGGTTTTGTTTTTATTCAT CTCAAAGTGT chrX:12240420-12240920 + 26 2.80e-08 AAGACAACTG GTTTGTTTTTTGGTTTTTATGG GGCTTTTTAT chr18:12520335-12520835 - 13 4.28e-08 TCTGTTTGAT TTGTTATTTTTGTTTTGAGTGT TGGTAACATG chr1:220527708-220528208 - 16 4.91e-08 CCTCTGGTGG TTTTATTTTTATTCGTGTTTGG TTTTTGCCGG chr1:167658524-167659024 + 74 6.43e-08 atttcccttt ttatggtattttttttttgtct ctagt chr1:215581851-215582351 + 64 1.40e-07 ttaatccttg tggagtttacttttttgtatgt ggtatgagat chr3:14947397-14947897 - 64 1.40e-07 GCGGAGAAGG GGGGGTTTGTTATTGTTTTTGT CAGTGAAAGG chr21:43857383-43857883 - 7 1.40e-07 CCCGACAGAT TTGTTTGTTTATTTTTGAGATA GAGTTT chr6:167829467-167829967 + 2 1.58e-07 T TTCTTTTGTTGTTTTTTTTTTG GGTACAGTGA chr2:238881199-238881699 + 60 1.58e-07 attagtgtta gtgtgagtattagtgttagtat ctattagtgt chr13:79918520-79919020 + 49 2.02e-07 GGCATGTTAA TGGAGTTTGTTTTTATAAACAT GAAGTGTTTG chr12:95073288-95073788 + 38 2.28e-07 GGAGAGAGCT TTCTGTGTTTGGGTATTTCTGG GGGGTCAGAG chr1:164223311-164223811 - 2 2.57e-07 TTGATTCATC TTGAGTTGATTTTTGTATAAGG T chr14:32134485-32134985 - 28 2.89e-07 TGATGAGACA TTGTGATGATATTTTTATTTCA AACAAGATTT chr2:177038716-177039216 - 58 4.08e-07 TATGTTCTAG TGATAAGAATGTGTTTTATTGT GGTCGTAATA chr9:123678483-123678983 + 78 5.71e-07 GTATTATCAC TTATGTTAATATGTTTCAATCA G chr15:96053075-96053575 - 52 6.37e-07 CTCTGCATAT TGGTGTTATTTTGTATAAACAA GGTTAACACT chr17:73310580-73311080 - 1 6.37e-07 GGGAGAGGAC TGAAGTGCGTGTGTGTGTGTGT chr13:78618329-78618829 - 53 7.10e-07 CTTTCTAATC TTGAGATTTTATGATTCTATAT TTACCTTTGC chr8:25998500-25999000 + 19 7.90e-07 GATAATGATG TTTAATTTGTTATTGGCTGTGT AAAGGTTAAC chr8:33513353-33513853 + 51 8.79e-07 GATTTAACAC TTGTATTTGTGGGCTTGTTACT TATGATAACA chr8:109611203-109611703 - 33 9.77e-07 ATGTGATAAG TGGACTTAGTGTTTATCTTTAT GGCAGGGTTA chr3:194134796-194135296 - 55 1.08e-06 CCGGGAGGAT GTGTGTGTGCGTGCGTGTGTGA GTGAGTGTGT chr5:69521095-69521595 + 48 1.08e-06 tttatggaca ttttaattgtgttcagttgttt actattacag chr6:31829615-31830115 + 66 1.20e-06 GATTAGGGGC CTTTGTTCTTTAGTATGTTTGT CTTTGAGGTG chr13:46674978-46675478 - 57 1.33e-06 TTTTATTGTG TTCTAACAGTGTGTTTGTTTTT ACAGCTGCCT chr11:65472114-65472614 - 36 1.33e-06 TTCTCTATCT TTATCTTTATGAGCATATTTCT GGAACTTGCG chr11:68459755-68460255 - 5 1.80e-06 GACGAGAACT TTTGGGGTTTGGTTTTGTTTGA GACG chr18:70319100-70319600 + 32 1.80e-06 TACAACGCTA TTAACTTTTTATGTGGATTCTT TGCTTTATGT chr8:125429980-125430480 + 79 2.41e-06 ACAGCCCGGC CTGTGAGTGTGTGTGTATACAG chr5:124740922-124741422 + 27 2.65e-06 TTATGGCATG TTTTGATTTTGTTCACGTATTA AGGGAGTGGC chr5:17305900-17306400 - 77 2.65e-06 TG TTGTCTTTCTGATTGTGTAACT TGGCATTAAA chr19:36572884-36573384 - 8 2.65e-06 ACGACGTCAT TGTGGTGTGTGTGTGTGAGAGA CGGAGAC chr2:196853462-196853962 + 43 3.19e-06 ggataatttc ctgtgttaatctttattaatct taaagcttag chr1:145281098-145281598 + 14 5.03e-06 TAGGTGAGCC GTAAGTGTTTTTGTAATTCAGG GTGCGGGCTC chr1:148522544-148523044 + 53 5.03e-06 TAGATGAGCC GTAAGTGTTTTTGTAATTCAGG GTGCGGGCTC chr10:117148248-11714874 - 20 5.99e-06 ACATTATACC TTAATTTTATTAGCTTTTTCTG AGAATTCAAA chr7:133492152-133492652 + 63 6.53e-06 AAGATAGCAT TTCATTATGTATGCTTTTATGG TTCTCTTTTG chr19:93551-94051 - 37 6.53e-06 TCATGTGATG ATAAGTTATTAATTATTAATAA CAATTAGATC chr10:16686026-16686526 - 55 6.53e-06 TGCCTGCATT TGCTGTTTTTATTTGAGAGATA AATTTAAAAG chr19:40420482-40420982 - 2 7.11e-06 CTGCGGGCCT GTTTCTTTCTTTTCTTTTTCTT T chr1:52955551-52956051 - 32 7.11e-06 CGGTTCTCAA TTGTGGTGTCTTGTTTCTTTAA TCCTTGGTTA chr12:806366-806866 + 32 7.11e-06 AGAGTCATCA GGCAATGTTTATTTTGATATGA CGTAGTTGTG chr6:82072025-82072525 - 27 8.42e-06 TCCCTGGTGC TGCTGTTTATTTTTGCATCTCT CCCCAGGAGA chr5:73911893-73912393 - 7 9.94e-06 GATTAGCAAA TTGTGTTATTATGAGGTACTTA TGGAGA chr22:40711473-40711973 - 2 1.17e-05 CTCATGTCTC TGTAAATACTTGGTTTTTTTGT T chr19:47112637-47113137 + 56 1.17e-05 ACGGACACTG GTGGGTGGTTGGGTGTAATTAG CGCGGGCCGC chr6:4320897-4321397 + 68 1.17e-05 ATTTCTCATG CTGAGAGATTTATTGGTAATTT TGCTGCAGAT chr6:90677337-90677837 - 12 1.37e-05 ACAGTGCGAG TGAAGATAATGTTTGTCTACTG AGTGTGCCAA chr1:80403331-80403831 + 79 1.60e-05 CCTTTATCTC TTAAAACTGTCATTTTAATTTT chr6:2028574-2029074 + 31 1.73e-05 TTTTATGAAA TGATTTATGTGTTCATAATAGA GGCTAGTAAA chr3:194350309-194350809 - 39 1.87e-05 GTTAAGGGCT TTCTATTTACTATCTTATTTAG CCTATTTATC chr3:182365090-182365590 + 71 2.02e-05 TCTGAAGTGT GTGGATGTGTCAGCGTGAATGT GACTCATT chrX:136057546-136058046 - 27 2.17e-05 ATTGGAAACA TTGTTTGTATGGTTAGAACAGA CTGTCAAAAT chr7:27165484-27165984 + 47 3.12e-05 TGCCGCTCTA CGATGGGGTTTGTTTTAATTGT GGCCAACGAC chr6:38974721-38975221 - 1 3.12e-05 CTATCTTGAA ATGTGGTTGTTAGTATTACAGG chr10:33388296-33388796 - 7 3.12e-05 TTCTTGGCTG TTATCTAGATTGTTGTCATTAT CCGTGA chr7:23470380-23470880 - 61 3.35e-05 GATTCCTCAC GTGAGACGTTGATTTGTAGTTT GAACACGTGG chr6:115485218-115485718 + 33 3.35e-05 TGAGAACCCA TGCTGATATTCTGTATCAGCTT ACCTTGTACA chr3:182697537-182698037 - 76 3.85e-05 AGT TTTATTTGTTGTGCTATAAAAT GGCTGGCCCA chr17:48577450-48577950 + 41 4.42e-05 AATTTATGGG GGATGTAATTATGTGGCTCTGA AAACAGGCGA chr10:75613674-75614174 - 77 5.05e-05 GT TTGGATGATTTATTAGGTGCAG AAAGCATACT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif KTGTGTKTKTKTKTDTDTDTGT MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr19:39320101-39320601 2.3e-11 20_[-2]_58 chr1:28648550-28649050 5.1e-11 59_[+2]_19 chr17:48252524-48253024 2.1e-10 13_[+2]_65 chr15:40092249-40092749 2.6e-10 5_[-2]_73 chr11:120347010-12034751 2.6e-10 61_[+2]_17 chr12:57111962-57112462 2.6e-10 60_[-2]_18 chr19:33797048-33797548 2.6e-10 1_[+2]_77 chr7:100478119-100478619 2.6e-10 33_[+2]_45 chr5:125550184-125550684 2.6e-10 72_[+2]_6 chr1:228458414-228458914 2.6e-10 41_[+2]_37 chr2:241881320-241881820 2.6e-10 74_[+2]_4 chr5:93582538-93583038 3.9e-10 33_[+2]_45 chr5:36241807-36242307 1.1e-09 57_[+2]_21 chr7:133478510-133479010 6.1e-09 47_[+2]_31 chr6:43321935-43322435 2.1e-08 32_[-2]_46 chrX:12240420-12240920 2.8e-08 25_[+2]_53 chr18:12520335-12520835 4.3e-08 12_[-2]_66 chr1:220527708-220528208 4.9e-08 15_[-2]_63 chr1:167658524-167659024 6.4e-08 73_[+2]_5 chr1:215581851-215582351 1.4e-07 63_[+2]_15 chr3:14947397-14947897 1.4e-07 63_[-2]_15 chr21:43857383-43857883 1.4e-07 6_[-2]_72 chr6:167829467-167829967 1.6e-07 1_[+2]_77 chr2:238881199-238881699 1.6e-07 59_[+2]_19 chr13:79918520-79919020 2e-07 48_[+2]_30 chr12:95073288-95073788 2.3e-07 37_[+2]_41 chr1:164223311-164223811 2.6e-07 1_[-2]_77 chr14:32134485-32134985 2.9e-07 27_[-2]_51 chr2:177038716-177039216 4.1e-07 57_[-2]_21 chr9:123678483-123678983 5.7e-07 77_[+2]_1 chr15:96053075-96053575 6.4e-07 51_[-2]_27 chr17:73310580-73311080 6.4e-07 [-2]_78 chr13:78618329-78618829 7.1e-07 52_[-2]_26 chr8:25998500-25999000 7.9e-07 18_[+2]_60 chr8:33513353-33513853 8.8e-07 50_[+2]_28 chr8:109611203-109611703 9.8e-07 32_[-2]_46 chr3:194134796-194135296 1.1e-06 54_[-2]_24 chr5:69521095-69521595 1.1e-06 47_[+2]_31 chr6:31829615-31830115 1.2e-06 65_[+2]_13 chr13:46674978-46675478 1.3e-06 56_[-2]_22 chr11:65472114-65472614 1.3e-06 35_[-2]_43 chr11:68459755-68460255 1.8e-06 4_[-2]_74 chr18:70319100-70319600 1.8e-06 31_[+2]_47 chr8:125429980-125430480 2.4e-06 78_[+2] chr5:124740922-124741422 2.6e-06 26_[+2]_52 chr5:17305900-17306400 2.6e-06 76_[-2]_2 chr19:36572884-36573384 2.6e-06 7_[-2]_71 chr2:196853462-196853962 3.2e-06 42_[+2]_36 chr1:145281098-145281598 5e-06 13_[+2]_65 chr1:148522544-148523044 5e-06 52_[+2]_26 chr10:117148248-11714874 6e-06 19_[-2]_59 chr7:133492152-133492652 6.5e-06 62_[+2]_16 chr19:93551-94051 6.5e-06 36_[-2]_42 chr10:16686026-16686526 6.5e-06 54_[-2]_24 chr19:40420482-40420982 7.1e-06 1_[-2]_77 chr1:52955551-52956051 7.1e-06 31_[-2]_47 chr12:806366-806866 7.1e-06 31_[+2]_47 chr6:82072025-82072525 8.4e-06 26_[-2]_52 chr5:73911893-73912393 9.9e-06 6_[-2]_72 chr22:40711473-40711973 1.2e-05 1_[-2]_77 chr19:47112637-47113137 1.2e-05 55_[+2]_23 chr6:4320897-4321397 1.2e-05 67_[+2]_11 chr6:90677337-90677837 1.4e-05 11_[-2]_67 chr1:80403331-80403831 1.6e-05 78_[+2] chr6:2028574-2029074 1.7e-05 30_[+2]_48 chr3:194350309-194350809 1.9e-05 38_[-2]_40 chr3:182365090-182365590 2e-05 70_[+2]_8 chrX:136057546-136058046 2.2e-05 26_[-2]_52 chr7:27165484-27165984 3.1e-05 46_[+2]_32 chr6:38974721-38975221 3.1e-05 [-2]_78 chr10:33388296-33388796 3.1e-05 6_[-2]_72 chr7:23470380-23470880 3.4e-05 60_[-2]_18 chr6:115485218-115485718 3.4e-05 32_[+2]_46 chr3:182697537-182698037 3.9e-05 75_[-2]_3 chr17:48577450-48577950 4.4e-05 40_[+2]_38 chr10:75613674-75614174 5e-05 76_[-2]_2 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif KTGTGTKTKTKTKTDTDTDTGT MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF KTGTGTKTKTKTKTDTDTDTGT width=22 seqs=76 chr19:39320101-39320601 ( 21) TTGTGTGTGTGTGTGTGTGTGT 1 chr1:28648550-28649050 ( 60) GTGTGTGTTTTTTTTTTTTTTT 1 chr17:48252524-48253024 ( 14) GTGTGTGTGTGTGTGTGTATGT 1 chr15:40092249-40092749 ( 6) GTGTGTGTGTGTGTGTGTGTGT 1 chr11:120347010-12034751 ( 62) GTGTGTGTGTGTGTGTGTGTGT 1 chr12:57111962-57112462 ( 61) GTGTGTGTGTGTGTGTGTGTGT 1 chr19:33797048-33797548 ( 2) GTGTGTGTGTGTGTGTGTGTGT 1 chr7:100478119-100478619 ( 34) GTGTGTGTGTGTGTGTGTGTGT 1 chr5:125550184-125550684 ( 73) GTGTGTGTGTGTGTGTGTGTGT 1 chr1:228458414-228458914 ( 42) GTGTGTGTGTGTGTGTGTGTGT 1 chr2:241881320-241881820 ( 75) GTGTGTGTGTGTGTGTGTGTGT 1 chr5:93582538-93583038 ( 34) GTGTGTGTGTGTGTATGTGTGT 1 chr5:36241807-36242307 ( 58) TTTTGTTTGTTTGTTTATTCGT 1 chr7:133478510-133479010 ( 48) TTAAGAGTTTATTTATTTTTTT 1 chr6:43321935-43322435 ( 33) TTGTGGTTTTGTTTTTATTCAT 1 chrX:12240420-12240920 ( 26) GTTTGTTTTTTGGTTTTTATGG 1 chr18:12520335-12520835 ( 13) TTGTTATTTTTGTTTTGAGTGT 1 chr1:220527708-220528208 ( 16) TTTTATTTTTATTCGTGTTTGG 1 chr1:167658524-167659024 ( 74) TTATGGTATTTTTTTTTTGTCT 1 chr1:215581851-215582351 ( 64) TGGAGTTTACTTTTTTGTATGT 1 chr3:14947397-14947897 ( 64) GGGGGTTTGTTATTGTTTTTGT 1 chr21:43857383-43857883 ( 7) TTGTTTGTTTATTTTTGAGATA 1 chr6:167829467-167829967 ( 2) TTCTTTTGTTGTTTTTTTTTTG 1 chr2:238881199-238881699 ( 60) GTGTGAGTATTAGTGTTAGTAT 1 chr13:79918520-79919020 ( 49) TGGAGTTTGTTTTTATAAACAT 1 chr12:95073288-95073788 ( 38) TTCTGTGTTTGGGTATTTCTGG 1 chr1:164223311-164223811 ( 2) TTGAGTTGATTTTTGTATAAGG 1 chr14:32134485-32134985 ( 28) TTGTGATGATATTTTTATTTCA 1 chr2:177038716-177039216 ( 58) TGATAAGAATGTGTTTTATTGT 1 chr9:123678483-123678983 ( 78) TTATGTTAATATGTTTCAATCA 1 chr15:96053075-96053575 ( 52) TGGTGTTATTTTGTATAAACAA 1 chr17:73310580-73311080 ( 1) TGAAGTGCGTGTGTGTGTGTGT 1 chr13:78618329-78618829 ( 53) TTGAGATTTTATGATTCTATAT 1 chr8:25998500-25999000 ( 19) TTTAATTTGTTATTGGCTGTGT 1 chr8:33513353-33513853 ( 51) TTGTATTTGTGGGCTTGTTACT 1 chr8:109611203-109611703 ( 33) TGGACTTAGTGTTTATCTTTAT 1 chr3:194134796-194135296 ( 55) GTGTGTGTGCGTGCGTGTGTGA 1 chr5:69521095-69521595 ( 48) TTTTAATTGTGTTCAGTTGTTT 1 chr6:31829615-31830115 ( 66) CTTTGTTCTTTAGTATGTTTGT 1 chr13:46674978-46675478 ( 57) TTCTAACAGTGTGTTTGTTTTT 1 chr11:65472114-65472614 ( 36) TTATCTTTATGAGCATATTTCT 1 chr11:68459755-68460255 ( 5) TTTGGGGTTTGGTTTTGTTTGA 1 chr18:70319100-70319600 ( 32) TTAACTTTTTATGTGGATTCTT 1 chr8:125429980-125430480 ( 79) CTGTGAGTGTGTGTGTATACAG 1 chr5:124740922-124741422 ( 27) TTTTGATTTTGTTCACGTATTA 1 chr5:17305900-17306400 ( 77) TTGTCTTTCTGATTGTGTAACT 1 chr19:36572884-36573384 ( 8) TGTGGTGTGTGTGTGTGAGAGA 1 chr2:196853462-196853962 ( 43) CTGTGTTAATCTTTATTAATCT 1 chr1:145281098-145281598 ( 14) GTAAGTGTTTTTGTAATTCAGG 1 chr1:148522544-148523044 ( 53) GTAAGTGTTTTTGTAATTCAGG 1 chr10:117148248-11714874 ( 20) TTAATTTTATTAGCTTTTTCTG 1 chr7:133492152-133492652 ( 63) TTCATTATGTATGCTTTTATGG 1 chr19:93551-94051 ( 37) ATAAGTTATTAATTATTAATAA 1 chr10:16686026-16686526 ( 55) TGCTGTTTTTATTTGAGAGATA 1 chr19:40420482-40420982 ( 2) GTTTCTTTCTTTTCTTTTTCTT 1 chr1:52955551-52956051 ( 32) TTGTGGTGTCTTGTTTCTTTAA 1 chr12:806366-806866 ( 32) GGCAATGTTTATTTTGATATGA 1 chr6:82072025-82072525 ( 27) TGCTGTTTATTTTTGCATCTCT 1 chr5:73911893-73912393 ( 7) TTGTGTTATTATGAGGTACTTA 1 chr22:40711473-40711973 ( 2) TGTAAATACTTGGTTTTTTTGT 1 chr19:47112637-47113137 ( 56) GTGGGTGGTTGGGTGTAATTAG 1 chr6:4320897-4321397 ( 68) CTGAGAGATTTATTGGTAATTT 1 chr6:90677337-90677837 ( 12) TGAAGATAATGTTTGTCTACTG 1 chr1:80403331-80403831 ( 79) TTAAAACTGTCATTTTAATTTT 1 chr6:2028574-2029074 ( 31) TGATTTATGTGTTCATAATAGA 1 chr3:194350309-194350809 ( 39) TTCTATTTACTATCTTATTTAG 1 chr3:182365090-182365590 ( 71) GTGGATGTGTCAGCGTGAATGT 1 chrX:136057546-136058046 ( 27) TTGTTTGTATGGTTAGAACAGA 1 chr7:27165484-27165984 ( 47) CGATGGGGTTTGTTTTAATTGT 1 chr6:38974721-38975221 ( 1) ATGTGGTTGTTAGTATTACAGG 1 chr10:33388296-33388796 ( 7) TTATCTAGATTGTTGTCATTAT 1 chr7:23470380-23470880 ( 61) GTGAGACGTTGATTTGTAGTTT 1 chr6:115485218-115485718 ( 33) TGCTGATATTCTGTATCAGCTT 1 chr3:182697537-182698037 ( 76) TTTATTTGTTGTGCTATAAAAT 1 chr17:48577450-48577950 ( 41) GGATGTAATTATGTGGCTCTGA 1 chr10:75613674-75614174 ( 77) TTGGATGATTTATTAGGTGCAG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif KTGTGTKTKTKTKTDTDTDTGT MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 22 n= 47400 bayes= 10.7244 E= 5.5e-073 -301 -213 7 152 -1289 -1289 -37 187 8 -128 79 -42 38 -1289 -187 161 -42 -187 119 -101 -1 -1289 -187 175 -201 -287 50 124 -10 -345 -128 164 -20 -287 35 95 -1289 -245 -1289 216 -31 -245 59 69 -10 -1289 -113 166 -1289 -1289 90 112 -301 -75 -1289 192 24 -1289 45 75 -201 -345 -113 190 8 -128 30 52 58 -1289 -1289 169 24 -145 7 69 -42 -99 -1289 172 -20 -145 76 8 -1 -1289 -55 148 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif KTGTGTKTKTKTKTDTDTDTGT MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 22 nsites= 76 E= 5.5e-073 0.026316 0.065789 0.302632 0.605263 0.000000 0.000000 0.223684 0.776316 0.223684 0.118421 0.500000 0.157895 0.276316 0.000000 0.078947 0.644737 0.157895 0.078947 0.657895 0.105263 0.210526 0.000000 0.078947 0.710526 0.052632 0.039474 0.407895 0.500000 0.197368 0.026316 0.118421 0.657895 0.184211 0.039474 0.368421 0.407895 0.000000 0.052632 0.000000 0.947368 0.171053 0.052632 0.434211 0.342105 0.197368 0.000000 0.131579 0.671053 0.000000 0.000000 0.539474 0.460526 0.026316 0.171053 0.000000 0.802632 0.250000 0.000000 0.394737 0.355263 0.052632 0.026316 0.131579 0.789474 0.223684 0.118421 0.355263 0.302632 0.315789 0.000000 0.000000 0.684211 0.250000 0.105263 0.302632 0.342105 0.157895 0.144737 0.000000 0.697368 0.184211 0.105263 0.486842 0.223684 0.210526 0.000000 0.197368 0.592105 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif KTGTGTKTKTKTKTDTDTDTGT MEME-2 regular expression -------------------------------------------------------------------------------- [TG][TG][GA][TA]G[TA][TG]T[TG]T[GT]T[GT]T[GTA]T[GTA][TA][TGA]T[GT][TA] -------------------------------------------------------------------------------- Time 691.37 secs. ******************************************************************************** ******************************************************************************** MOTIF CCGCCTCGGCCTCCCAAAGTGCTGGGATTACAG MEME-3 width = 33 sites = 9 llr = 349 E-value = 1.1e-055 ******************************************************************************** -------------------------------------------------------------------------------- Motif CCGCCTCGGCCTCCCAAAGTGCTGGGATTACAG MEME-3 Description -------------------------------------------------------------------------------- Simplified A :21::::2:::::::999:1:::1::a::a:9: pos.-specific C a7:9a:8::aa:9a9::::::a::::::::a:: probability G ::91:118a::::::1:19:a::9aa::::::a matrix T :1:::91::::a1:1:1:19::a::::aa::1: bits 2.2 * * **** 2.0 * * **** 1.8 * ** **** * *** **** ********* 1.6 * ** **** * *** **** ********* Relative 1.3 * **** ************************* Entropy 1.1 * **** ************************** (55.9 bits) 0.9 * ******************************* 0.7 ********************************* 0.4 ********************************* 0.2 ********************************* 0.0 --------------------------------- Multilevel CCGCCTCGGCCTCCCAAAGTGCTGGGATTACAG consensus A A sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCGCCTCGGCCTCCCAAAGTGCTGGGATTACAG MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- --------------------------------- chr1:150876744-150877244 - 59 3.66e-20 GTGATCCGG CCGCCTCGGCCTCCCAAAGTGCTGGGATTACAG ACGCGAGCCA chr5:181218359-181218859 - 11 6.35e-20 CGTGATCCGC CAGCCTCGGCCTCCCAAAGTGCTGGGATTACAG GCGTGAACCA chr6:28757387-28757887 + 38 2.99e-19 ggtgatcgcc ccgcctcggccttccaaagtgctgggattacag acgtgagcca chr10:68527495-68527995 - 60 3.35e-19 TGATCCGT CCGCCTGGGCCTCCCAAAGTGCTGGGATTACAG GCGTGAGCCA chr19:38518407-38518907 - 62 4.82e-19 ATCCAC CCGCCTCGGCCTCCCATAGTGCTGGGATTACAG GCGTGAGCCA chr21:43857383-43857883 - 54 9.15e-19 GGTGATCTGC CCACCTCAGCCTCCCAAAGTGCTGGGATTACAG GCATGAGTCA chr19:55399166-55399666 + 46 1.64e-18 ggtgacctgc ccgccttggcctcccaaagtgctaggattacag gcgtgagcca chr4:123508544-123509044 + 35 1.03e-17 gctgggatta caggcgcggcctcccaaagtgctgggattacag gcgtgagcca chr19:34175082-34175582 + 59 3.16e-15 agcaattctc ctgcctcagcctcctgagtagctgggattactg gcgcgtgcc -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCGCCTCGGCCTCCCAAAGTGCTGGGATTACAG MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr1:150876744-150877244 3.7e-20 58_[-3]_9 chr5:181218359-181218859 6.4e-20 10_[-3]_57 chr6:28757387-28757887 3e-19 37_[+3]_30 chr10:68527495-68527995 3.4e-19 59_[-3]_8 chr19:38518407-38518907 4.8e-19 61_[-3]_6 chr21:43857383-43857883 9.2e-19 53_[-3]_14 chr19:55399166-55399666 1.6e-18 45_[+3]_22 chr4:123508544-123509044 1e-17 34_[+3]_33 chr19:34175082-34175582 3.2e-15 58_[+3]_9 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCGCCTCGGCCTCCCAAAGTGCTGGGATTACAG MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CCGCCTCGGCCTCCCAAAGTGCTGGGATTACAG width=33 seqs=9 chr1:150876744-150877244 ( 59) CCGCCTCGGCCTCCCAAAGTGCTGGGATTACAG 1 chr5:181218359-181218859 ( 11) CAGCCTCGGCCTCCCAAAGTGCTGGGATTACAG 1 chr6:28757387-28757887 ( 38) CCGCCTCGGCCTTCCAAAGTGCTGGGATTACAG 1 chr10:68527495-68527995 ( 60) CCGCCTGGGCCTCCCAAAGTGCTGGGATTACAG 1 chr19:38518407-38518907 ( 62) CCGCCTCGGCCTCCCATAGTGCTGGGATTACAG 1 chr21:43857383-43857883 ( 54) CCACCTCAGCCTCCCAAAGTGCTGGGATTACAG 1 chr19:55399166-55399666 ( 46) CCGCCTTGGCCTCCCAAAGTGCTAGGATTACAG 1 chr4:123508544-123509044 ( 35) CAGGCGCGGCCTCCCAAAGTGCTGGGATTACAG 1 chr19:34175082-34175582 ( 59) CTGCCTCAGCCTCCTGAGTAGCTGGGATTACTG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCGCCTCGGCCTCCCAAAGTGCTGGGATTACAG MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 33 n= 40800 bayes= 12.2804 E= 1.1e-055 -982 179 -982 -982 7 121 -982 -93 -93 -982 162 -982 -982 162 -137 -982 -982 179 -982 -982 -982 -982 -137 207 -982 143 -137 -93 7 -982 143 -982 -982 -982 179 -982 -982 179 -982 -982 -982 179 -982 -982 -982 -982 -982 224 -982 162 -982 -93 -982 179 -982 -982 -982 162 -982 -93 207 -982 -137 -982 207 -982 -982 -93 207 -982 -137 -982 -982 -982 162 -93 -93 -982 -982 207 -982 -982 179 -982 -982 179 -982 -982 -982 -982 -982 224 -93 -982 162 -982 -982 -982 179 -982 -982 -982 179 -982 224 -982 -982 -982 -982 -982 -982 224 -982 -982 -982 224 224 -982 -982 -982 -982 179 -982 -982 207 -982 -982 -93 -982 -982 179 -982 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCGCCTCGGCCTCCCAAAGTGCTGGGATTACAG MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 33 nsites= 9 E= 1.1e-055 0.000000 1.000000 0.000000 0.000000 0.222222 0.666667 0.000000 0.111111 0.111111 0.000000 0.888889 0.000000 0.000000 0.888889 0.111111 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.111111 0.888889 0.000000 0.777778 0.111111 0.111111 0.222222 0.000000 0.777778 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.888889 0.000000 0.111111 0.000000 1.000000 0.000000 0.000000 0.000000 0.888889 0.000000 0.111111 0.888889 0.000000 0.111111 0.000000 0.888889 0.000000 0.000000 0.111111 0.888889 0.000000 0.111111 0.000000 0.000000 0.000000 0.888889 0.111111 0.111111 0.000000 0.000000 0.888889 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.111111 0.000000 0.888889 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.888889 0.000000 0.000000 0.111111 0.000000 0.000000 1.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCGCCTCGGCCTCCCAAAGTGCTGGGATTACAG MEME-3 regular expression -------------------------------------------------------------------------------- C[CA]GCCTC[GA]GCCTCCCAAAGTGCTGGGATTACAG -------------------------------------------------------------------------------- Time 972.98 secs. ******************************************************************************** ******************************************************************************** MOTIF GRGGTCAGRGG MEME-4 width = 11 sites = 87 llr = 837 E-value = 1.2e-030 ******************************************************************************** -------------------------------------------------------------------------------- Motif GRGGTCAGRGG MEME-4 Description -------------------------------------------------------------------------------- Simplified A 27::::9132: pos.-specific C :::::a:21:1 probability G 73aa::17587 matrix T ::::a:::2:2 bits 2.2 * 2.0 * 1.8 ***** 1.6 ***** Relative 1.3 ***** Entropy 1.1 ****** * (13.9 bits) 0.9 ******* * 0.7 ******* * 0.4 ******** ** 0.2 *********** 0.0 ----------- Multilevel GAGGTCAGGGG consensus AG CA sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GRGGTCAGRGG MEME-4 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ----------- chr12:131929296-13192979 + 3 4.51e-07 GA GAGGTCAGGGG TCAGCAGGAG chr1:26189281-26189781 - 26 4.51e-07 GCTGCTCTCT GAGGTCAGGGG GCAGAGATGG chr19:44886097-44886597 + 86 4.51e-07 TTCCATGGGG GAGGTCAGGGG TGAA chr16:89717764-89718264 - 62 4.51e-07 TGGGATCACA GAGGTCAGGGG GACCCACTGG chr19:44813525-44814025 - 41 7.83e-07 GCGACCAATT GAGGTCAGAGG TCAGTGGCCA chr19:50406345-50406845 - 5 7.83e-07 GGGTGAGGTG GAGGTCAGAGG TTGG chr17:50113562-50114062 + 9 7.83e-07 CTTGCCTA GAGGTCAGAGG TCAGGGTGGT chr1:1302848-1303348 + 87 7.83e-07 ACCCCACCTT GAGGTCAGAGG TCA chr11:65551579-65552079 + 63 1.11e-06 GGTCAGGTGG GAGGTCAGTGG ATGGGTCAGG chr1:2147756-2148256 - 28 1.11e-06 GATAGATGGA GAGGTCAGTGG ACAATAGATG chr1:2146902-2147402 - 7 1.11e-06 GATAGATGGA GAGGTCAGTGG ACAATA chr1:2147955-2148455 - 62 1.11e-06 GATAGACGGA GAGGTCAGTGG ACAACAGACG chr6:157147224-157147724 - 2 1.78e-06 GTGAGGGACG GAGGTCAGGGT C chr15:71115050-71115550 + 82 2.39e-06 GTTGACCTCC GGGGTCAGGGG TGCGGATG chr19:38518407-38518907 + 3 2.39e-06 tt ggggtcagggg tcatgctagt chr19:48444277-48444777 - 2 2.39e-06 GTCACAGTTT GGGGTCAGGGG T chr16:2189441-2189941 - 3 2.39e-06 GGTTGGACTT GGGGTCAGGGG TC chr19:55399166-55399666 - 24 3.21e-06 CAGGTCACCT GAGGTCAGGAG TTCAAGACCA chr6:27602210-27602710 - 48 3.21e-06 TGGATCACCT GAGGTCAGGAG TTCGAGACCA chr17:4810844-4811344 - 3 3.21e-06 GCGGGTCATT GAGGTCAGGAG GG chr5:181218359-181218859 + 53 3.21e-06 ggcggatcac gaggtcaggag atcgagacca chr19:17624278-17624778 - 7 3.21e-06 ATAGCTTTCA AAGGTCAGAGG TCATCT chr22:29388126-29388626 - 11 4.11e-06 AGGGGTTTGC GGGGTCAGAGG TCATGAAGAG chr19:58557940-58558440 - 85 5.96e-06 GGTCG GAGGTCAGGGC CTGAGGCAGG chr19:1261962-1262462 + 26 5.96e-06 CGGGCAGGAG AAGGTCAGTGG AGGTCATGGC chr6:39725047-39725547 - 86 5.96e-06 GAGA GAGGTCAAGGG TCATTGCAGA chr19:727090-727590 - 72 6.66e-06 GGTCAGAGTC AAGGTCAGGGT CAGGATTGAG chr7:159013209-159013709 + 4 8.83e-06 gtt ggggtcagggt tgaggttgag chr1:228452408-228452908 - 17 8.83e-06 AAGGTCAGGA GGGGTCAGGGT TGGGTCAGGG chr6:167735002-167735502 - 80 8.83e-06 GTCAGCGGCA GAGGTCAGCGG GGGAGGTCTG chr17:82586128-82586628 + 10 8.83e-06 GACCACAGG GAGGTCAAAGG TAGGCGGAGG chr1:27348760-27349260 - 61 8.83e-06 TGGTGAGGAA GAGGTCAAAGG TCATATTGGG chr11:67630626-67631126 - 13 8.83e-06 CTGGGACAAG GAGGTCAAAGG CCTGGGGCTG chr3:198173990-198174490 + 2 8.83e-06 c agggtcagggg tttgggtcaa chr4:190122275-190122775 + 77 8.83e-06 ggtcagggtc agggtcagggg tagggtaggg chr20:38033507-38034007 - 7 8.83e-06 CCGCGAGAGC GAGGTCAAAGG GCAAGG chr19:50678331-50678831 + 52 8.83e-06 ATGACAGGGA AGGGTCAGGGG GACAGTGGAG chr19:1068086-1068586 + 18 8.83e-06 TGACCCCTGT GGGGTCAGGGT GATGGTGGCC chr1:43604154-43604654 - 32 8.83e-06 TCATACAGCA GAGGTCAGTAG GTTAAGGACA chr3:198173490-198173990 + 22 8.83e-06 ggtcagggtc agggtcagggg tttgggtcaa chr5:684840-685340 + 48 9.83e-06 CCGGTCCAGA GAGGTCACTGG TCCTGAGAGG chr12:95073288-95073788 + 60 1.16e-05 GTATTTCTGG GGGGTCAGAGT TCGTGACCTC chr19:29666005-29666505 + 79 1.16e-05 CTGGCCAGAG AGGGTCAGAGG CCAAGGAGGT chr11:118997931-11899843 + 1 1.16e-05 . AGGGTCAGAGG CCGCCGGATG chr1:155178825-155179325 - 15 1.26e-05 ACAAGGACAA AAGGTCAGAAG GGCCAGGATT chr19:13101601-13102101 - 24 1.48e-05 TGTCAGTAGT GGGGTCACAGG GTTGCTATGG chr19:48596174-48596674 - 24 1.48e-05 TCCGGGGGCA GAGGTCAGTGC ATCACCTTAC chr16:30355366-30355866 + 52 1.83e-05 AAGTCCGAGC AGGGTCAGTGG GTTGCTGCTC chrX:49053775-49054275 - 19 1.83e-05 CAGGTCGTAA GGGGTCAGGGC TGAGGCCACG chr6:159726793-159727293 - 90 2.13e-05 . GAGGTCGGAGG TCAGCCCCAG chr17:6470610-6471110 + 52 2.13e-05 TGCTCTCCTC AAGGTCAGAGC TCTGATTTGA chr7:100450351-100450851 + 79 2.13e-05 GCGCCACCTG GAGGTCAGGAC CAAGACGAGA chr17:64506232-64506732 - 69 2.13e-05 AGAAGAAGGT GAGGTCAAGAG AGTGCAGAAT chr17:3929734-3930234 - 71 2.13e-05 TTGGGGTCCA GAGGTCAAGAG CATCCCAGAC chr13:99200876-99201376 + 18 2.42e-05 CCCGGTCTTG GGGGTCAGCGG AAACCGCCCC chr14:105163392-10516389 - 73 2.42e-05 AGATCTGAGT GAGGTCACTGT CCCCAGACCA chr1:974695-975195 + 45 2.65e-05 AAAGGTCAGC AGGGTCAGAGT ATGTGAGGTC chr1:1145217-1145717 - 84 2.65e-05 GGCCAT GGGGTCACTGG GGTGAGCCAT chr19:1254484-1254984 - 73 3.05e-05 AAACTAGCCC AAGGTCACGAG GTCACAACCA chr1:1332200-1332700 - 45 3.58e-05 GCCCCATGAC CAGGTCAGAGG TCAGCCAGGC chr21:43810245-43810745 - 55 3.58e-05 ATGCAGGGGA GAGGTCACAAT GGGGAGAGGC chr22:37803111-37803611 - 47 3.58e-05 GTTAGTTCAA AAGGTCAAGGT TCGTCTTTTG chr19:39125819-39126319 + 29 3.98e-05 TCGCGTCCGA GGGGTCGGGGG TTAACGCAGA chr1:237864267-237864767 - 23 3.98e-05 CCTTGGCCCG GAGGTCAGCGC TCTCCCGGAC chr22:49962946-49963446 - 86 4.24e-05 GTCA GAGGTCACTGC TTCCGCAGGA chr2:28894089-28894589 - 57 4.24e-05 CGGATCCCCT GAGGTCGGAGT TCGAGACCAG chr6:28757387-28757887 - 16 4.24e-05 GCGATCACCT GAGGTCGGGAG TTCGAGACCA chr19:33293292-33293792 + 83 4.71e-05 CCTGATGCTG AAGGTCACGGC GGCTCCC chr19:18193247-18193747 - 87 5.05e-05 TCA GGGGTCACGGC CCGCAGTCGG chr1:236281578-236282078 - 4 5.05e-05 GGTGTGGGTA GAGGTCAGCAT GAG chr19:33247320-33247820 - 54 5.05e-05 AACAGGTTCA GGGGTCACTGT GTGTGGCCAG chr14:102316755-10231725 + 9 5.05e-05 ACTGTGAA GAGGTCGGAAG TCGCGGCTGT chr22:24952240-24952740 - 90 5.50e-05 . GAGGTCACGAC TCGCTTGGAC chr14:103520882-10352138 + 1 5.50e-05 . AAGGTCACCGG CGCAGGAGGA chr19:13846933-13847433 - 27 5.81e-05 GGCCTGGGGC CAGGTCAGGGT GGCAGGCCAG chr12:123383426-12338392 + 29 6.31e-05 AACTGCTGGA GAGGTCGGTGT GCTGGAGTTG chr19:38464627-38465127 + 26 6.31e-05 ggttagggtg aaggtcatagg gtcagggctc chr19:6737938-6738438 - 12 6.64e-05 GTCTCAGCCT GGGGTCATAGG TCATCCTAGG chr7:98252136-98252636 + 22 6.64e-05 GGGGTCGCGC CAGGTCAGGAG TCCAGAGTCG chr19:35748454-35748954 - 9 7.28e-05 CAAAGGGCCT AGGGTCACAAG TCAAGGCG chr13:113560186-11356068 + 57 8.67e-05 GGGTCTGGAC GGGGTCGCGGG TCTGGACGGG chr7:149624687-149625187 - 8 8.67e-05 GGGTCGGCCA GGGGTCGCGGG GTCAGCT chr15:84981108-84981608 + 19 8.67e-05 GCACCCGCTG GAGGTCACCGC TGGGGGCTCG chr19:18224075-18224575 + 89 9.24e-05 TTTTGGGTCA AAGGTCACCGT A chr19:45348999-45349499 - 3 9.24e-05 GTGAGATGGG TAGGTCAGGGT TG chr1:1239705-1240205 + 6 1.05e-04 TGGTG GAGGTCACGGA GAAGCCGGCA chr17:82065712-82066212 + 60 1.11e-04 TGGCTAGAGA GGGGTCGGGGC TCGCCGGGAC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GRGGTCAGRGG MEME-4 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr12:131929296-13192979 4.5e-07 2_[+4]_87 chr1:26189281-26189781 4.5e-07 25_[-4]_64 chr19:44886097-44886597 4.5e-07 85_[+4]_4 chr16:89717764-89718264 4.5e-07 61_[-4]_28 chr19:44813525-44814025 7.8e-07 40_[-4]_49 chr19:50406345-50406845 7.8e-07 4_[-4]_85 chr17:50113562-50114062 7.8e-07 8_[+4]_81 chr1:1302848-1303348 7.8e-07 86_[+4]_3 chr11:65551579-65552079 1.1e-06 62_[+4]_27 chr1:2147756-2148256 1.1e-06 27_[-4]_62 chr1:2146902-2147402 1.1e-06 6_[-4]_83 chr1:2147955-2148455 1.1e-06 61_[-4]_28 chr6:157147224-157147724 1.8e-06 1_[-4]_88 chr15:71115050-71115550 2.4e-06 81_[+4]_8 chr19:38518407-38518907 2.4e-06 2_[+4]_87 chr19:48444277-48444777 2.4e-06 1_[-4]_88 chr16:2189441-2189941 2.4e-06 2_[-4]_87 chr19:55399166-55399666 3.2e-06 23_[-4]_66 chr6:27602210-27602710 3.2e-06 47_[-4]_42 chr17:4810844-4811344 3.2e-06 2_[-4]_87 chr5:181218359-181218859 3.2e-06 52_[+4]_37 chr19:17624278-17624778 3.2e-06 6_[-4]_83 chr22:29388126-29388626 4.1e-06 10_[-4]_79 chr19:58557940-58558440 6e-06 84_[-4]_5 chr19:1261962-1262462 6e-06 25_[+4]_64 chr6:39725047-39725547 6e-06 85_[-4]_4 chr19:727090-727590 6.7e-06 71_[-4]_18 chr7:159013209-159013709 8.8e-06 3_[+4]_86 chr1:228452408-228452908 8.8e-06 16_[-4]_73 chr6:167735002-167735502 8.8e-06 79_[-4]_10 chr17:82586128-82586628 8.8e-06 9_[+4]_80 chr1:27348760-27349260 8.8e-06 60_[-4]_29 chr11:67630626-67631126 8.8e-06 12_[-4]_77 chr3:198173990-198174490 8.8e-06 1_[+4]_88 chr4:190122275-190122775 8.8e-06 76_[+4]_13 chr20:38033507-38034007 8.8e-06 6_[-4]_83 chr19:50678331-50678831 8.8e-06 51_[+4]_38 chr19:1068086-1068586 8.8e-06 17_[+4]_72 chr1:43604154-43604654 8.8e-06 31_[-4]_58 chr3:198173490-198173990 8.8e-06 21_[+4]_68 chr5:684840-685340 9.8e-06 47_[+4]_42 chr12:95073288-95073788 1.2e-05 59_[+4]_30 chr19:29666005-29666505 1.2e-05 78_[+4]_11 chr11:118997931-11899843 1.2e-05 [+4]_89 chr1:155178825-155179325 1.3e-05 14_[-4]_75 chr19:13101601-13102101 1.5e-05 23_[-4]_66 chr19:48596174-48596674 1.5e-05 23_[-4]_66 chr16:30355366-30355866 1.8e-05 51_[+4]_38 chrX:49053775-49054275 1.8e-05 18_[-4]_71 chr6:159726793-159727293 2.1e-05 89_[-4] chr17:6470610-6471110 2.1e-05 51_[+4]_38 chr7:100450351-100450851 2.1e-05 78_[+4]_11 chr17:64506232-64506732 2.1e-05 68_[-4]_21 chr17:3929734-3930234 2.1e-05 70_[-4]_19 chr13:99200876-99201376 2.4e-05 17_[+4]_72 chr14:105163392-10516389 2.4e-05 72_[-4]_17 chr1:974695-975195 2.7e-05 44_[+4]_45 chr1:1145217-1145717 2.7e-05 83_[-4]_6 chr19:1254484-1254984 3.1e-05 72_[-4]_17 chr1:1332200-1332700 3.6e-05 44_[-4]_45 chr21:43810245-43810745 3.6e-05 54_[-4]_35 chr22:37803111-37803611 3.6e-05 46_[-4]_43 chr19:39125819-39126319 4e-05 28_[+4]_61 chr1:237864267-237864767 4e-05 22_[-4]_67 chr22:49962946-49963446 4.2e-05 85_[-4]_4 chr2:28894089-28894589 4.2e-05 56_[-4]_33 chr6:28757387-28757887 4.2e-05 15_[-4]_74 chr19:33293292-33293792 4.7e-05 82_[+4]_7 chr19:18193247-18193747 5e-05 86_[-4]_3 chr1:236281578-236282078 5e-05 3_[-4]_86 chr19:33247320-33247820 5e-05 53_[-4]_36 chr14:102316755-10231725 5e-05 8_[+4]_81 chr22:24952240-24952740 5.5e-05 89_[-4] chr14:103520882-10352138 5.5e-05 [+4]_89 chr19:13846933-13847433 5.8e-05 26_[-4]_63 chr12:123383426-12338392 6.3e-05 28_[+4]_61 chr19:38464627-38465127 6.3e-05 25_[+4]_64 chr19:6737938-6738438 6.6e-05 11_[-4]_78 chr7:98252136-98252636 6.6e-05 21_[+4]_68 chr19:35748454-35748954 7.3e-05 8_[-4]_81 chr13:113560186-11356068 8.7e-05 56_[+4]_33 chr7:149624687-149625187 8.7e-05 7_[-4]_82 chr15:84981108-84981608 8.7e-05 18_[+4]_71 chr19:18224075-18224575 9.2e-05 88_[+4]_1 chr19:45348999-45349499 9.2e-05 2_[-4]_87 chr1:1239705-1240205 0.00011 5_[+4]_84 chr17:82065712-82066212 0.00011 59_[+4]_30 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GRGGTCAGRGG MEME-4 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF GRGGTCAGRGG width=11 seqs=87 chr12:131929296-13192979 ( 3) GAGGTCAGGGG 1 chr1:26189281-26189781 ( 26) GAGGTCAGGGG 1 chr19:44886097-44886597 ( 86) GAGGTCAGGGG 1 chr16:89717764-89718264 ( 62) GAGGTCAGGGG 1 chr19:44813525-44814025 ( 41) GAGGTCAGAGG 1 chr19:50406345-50406845 ( 5) GAGGTCAGAGG 1 chr17:50113562-50114062 ( 9) GAGGTCAGAGG 1 chr1:1302848-1303348 ( 87) GAGGTCAGAGG 1 chr11:65551579-65552079 ( 63) GAGGTCAGTGG 1 chr1:2147756-2148256 ( 28) GAGGTCAGTGG 1 chr1:2146902-2147402 ( 7) GAGGTCAGTGG 1 chr1:2147955-2148455 ( 62) GAGGTCAGTGG 1 chr6:157147224-157147724 ( 2) GAGGTCAGGGT 1 chr15:71115050-71115550 ( 82) GGGGTCAGGGG 1 chr19:38518407-38518907 ( 3) GGGGTCAGGGG 1 chr19:48444277-48444777 ( 2) GGGGTCAGGGG 1 chr16:2189441-2189941 ( 3) GGGGTCAGGGG 1 chr19:55399166-55399666 ( 24) GAGGTCAGGAG 1 chr6:27602210-27602710 ( 48) GAGGTCAGGAG 1 chr17:4810844-4811344 ( 3) GAGGTCAGGAG 1 chr5:181218359-181218859 ( 53) GAGGTCAGGAG 1 chr19:17624278-17624778 ( 7) AAGGTCAGAGG 1 chr22:29388126-29388626 ( 11) GGGGTCAGAGG 1 chr19:58557940-58558440 ( 85) GAGGTCAGGGC 1 chr19:1261962-1262462 ( 26) AAGGTCAGTGG 1 chr6:39725047-39725547 ( 86) GAGGTCAAGGG 1 chr19:727090-727590 ( 72) AAGGTCAGGGT 1 chr7:159013209-159013709 ( 4) GGGGTCAGGGT 1 chr1:228452408-228452908 ( 17) GGGGTCAGGGT 1 chr6:167735002-167735502 ( 80) GAGGTCAGCGG 1 chr17:82586128-82586628 ( 10) GAGGTCAAAGG 1 chr1:27348760-27349260 ( 61) GAGGTCAAAGG 1 chr11:67630626-67631126 ( 13) GAGGTCAAAGG 1 chr3:198173990-198174490 ( 2) AGGGTCAGGGG 1 chr4:190122275-190122775 ( 77) AGGGTCAGGGG 1 chr20:38033507-38034007 ( 7) GAGGTCAAAGG 1 chr19:50678331-50678831 ( 52) AGGGTCAGGGG 1 chr19:1068086-1068586 ( 18) GGGGTCAGGGT 1 chr1:43604154-43604654 ( 32) GAGGTCAGTAG 1 chr3:198173490-198173990 ( 22) AGGGTCAGGGG 1 chr5:684840-685340 ( 48) GAGGTCACTGG 1 chr12:95073288-95073788 ( 60) GGGGTCAGAGT 1 chr19:29666005-29666505 ( 79) AGGGTCAGAGG 1 chr11:118997931-11899843 ( 1) AGGGTCAGAGG 1 chr1:155178825-155179325 ( 15) AAGGTCAGAAG 1 chr19:13101601-13102101 ( 24) GGGGTCACAGG 1 chr19:48596174-48596674 ( 24) GAGGTCAGTGC 1 chr16:30355366-30355866 ( 52) AGGGTCAGTGG 1 chrX:49053775-49054275 ( 19) GGGGTCAGGGC 1 chr6:159726793-159727293 ( 90) GAGGTCGGAGG 1 chr17:6470610-6471110 ( 52) AAGGTCAGAGC 1 chr7:100450351-100450851 ( 79) GAGGTCAGGAC 1 chr17:64506232-64506732 ( 69) GAGGTCAAGAG 1 chr17:3929734-3930234 ( 71) GAGGTCAAGAG 1 chr13:99200876-99201376 ( 18) GGGGTCAGCGG 1 chr14:105163392-10516389 ( 73) GAGGTCACTGT 1 chr1:974695-975195 ( 45) AGGGTCAGAGT 1 chr1:1145217-1145717 ( 84) GGGGTCACTGG 1 chr19:1254484-1254984 ( 73) AAGGTCACGAG 1 chr1:1332200-1332700 ( 45) CAGGTCAGAGG 1 chr21:43810245-43810745 ( 55) GAGGTCACAAT 1 chr22:37803111-37803611 ( 47) AAGGTCAAGGT 1 chr19:39125819-39126319 ( 29) GGGGTCGGGGG 1 chr1:237864267-237864767 ( 23) GAGGTCAGCGC 1 chr22:49962946-49963446 ( 86) GAGGTCACTGC 1 chr2:28894089-28894589 ( 57) GAGGTCGGAGT 1 chr6:28757387-28757887 ( 16) GAGGTCGGGAG 1 chr19:33293292-33293792 ( 83) AAGGTCACGGC 1 chr19:18193247-18193747 ( 87) GGGGTCACGGC 1 chr1:236281578-236282078 ( 4) GAGGTCAGCAT 1 chr19:33247320-33247820 ( 54) GGGGTCACTGT 1 chr14:102316755-10231725 ( 9) GAGGTCGGAAG 1 chr22:24952240-24952740 ( 90) GAGGTCACGAC 1 chr14:103520882-10352138 ( 1) AAGGTCACCGG 1 chr19:13846933-13847433 ( 27) CAGGTCAGGGT 1 chr12:123383426-12338392 ( 29) GAGGTCGGTGT 1 chr19:38464627-38465127 ( 26) AAGGTCATAGG 1 chr19:6737938-6738438 ( 12) GGGGTCATAGG 1 chr7:98252136-98252636 ( 22) CAGGTCAGGAG 1 chr19:35748454-35748954 ( 9) AGGGTCACAAG 1 chr13:113560186-11356068 ( 57) GGGGTCGCGGG 1 chr7:149624687-149625187 ( 8) GGGGTCGCGGG 1 chr15:84981108-84981608 ( 19) GAGGTCACCGC 1 chr19:18224075-18224575 ( 89) AAGGTCACCGT 1 chr19:45348999-45349499 ( 3) TAGGTCAGGGT 1 chr1:1239705-1240205 ( 6) GAGGTCACGGA 1 chr17:82065712-82066212 ( 60) GGGGTCGGGGC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GRGGTCAGRGG MEME-4 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 11 n= 54000 bayes= 9.6187 E= 1.2e-030 12 -306 133 -420 165 -1309 21 -1309 -1309 -1309 179 -1309 -1309 -1309 179 -1309 -1309 -1309 -1309 224 -1309 179 -1309 -1309 208 -1309 -148 -1309 -120 -48 123 -320 44 -184 71 -40 -12 -1309 148 -1309 -420 -106 118 -12 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GRGGTCAGRGG MEME-4 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 11 nsites= 87 E= 1.2e-030 0.229885 0.034483 0.724138 0.011494 0.666667 0.000000 0.333333 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.896552 0.000000 0.103448 0.000000 0.091954 0.206897 0.678161 0.022989 0.287356 0.080460 0.471264 0.160920 0.195402 0.000000 0.804598 0.000000 0.011494 0.137931 0.655172 0.195402 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GRGGTCAGRGG MEME-4 regular expression -------------------------------------------------------------------------------- [GA][AG]GGTCA[GC][GA]GG -------------------------------------------------------------------------------- Time 1263.02 secs. ******************************************************************************** ******************************************************************************** MOTIF AWKNWWWTDWHAVNWNHWTNDTWWWTWWTWA MEME-5 width = 31 sites = 72 llr = 808 E-value = 9.1e-022 ******************************************************************************** -------------------------------------------------------------------------------- Motif AWKNWWWTDWHAVNWNHWTNDTWWWTWWTWA MEME-5 Description -------------------------------------------------------------------------------- Simplified A 5513355:34483332453333443134356 pos.-specific C 1::321::112:32:231:21:211:1:1:1 probability G 1143:1233:113223:12322112322:22 matrix T 2352533735221343245346245644631 bits 2.2 2.0 1.8 1.6 Relative 1.3 * Entropy 1.1 * * (16.2 bits) 0.9 * * * * * * 0.7 ** * ** * * *** * * **** 0.4 *** **** * * * *** * *** **** 0.2 *** ******** ** *** *********** 0.0 ------------------------------- Multilevel AATCTAATATAACATTAATTTTAATTTATAA consensus TTGAATTGTAT ATAGCTAAAATTAGATAT sequence G G C GC AT GGG C -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AWKNWWWTDWHAVNWNHWTNDTWWWTWWTWA MEME-5 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ------------------------------- chr19:33293292-33293792 + 9 5.00e-09 AACTCAGG AATCAAATAAAACGTGTTTGCAAATTGTAAA TCGCTCCAGG chr19:93551-94051 - 5 5.00e-09 TATTAATAAC AATTAGATCATAAGTTATTTATTAATTATTA ATAA chr5:76585788-76586288 - 37 1.94e-08 AGATACCATG CTGACATTTTCAAAACCATAATATTTTATGA ACCAATTCTC chr15:67792429-67792929 + 58 5.89e-08 TGTCATCCCT AATGGTATTAAAAATCAAGATGAAGTTGTAA ATCTGCTCTG chr5:27510984-27511484 - 42 7.68e-08 ATACCCTGTG GAGGTTAGTAAAAATTTATTATCTTTCTTGA CTTAAAGAGG chr1:87718277-87718777 - 50 8.76e-08 ACAAGAGGAC ATTGTTTTATAGGATGCTATTTAGATAAAAA CCTGCAGGGT chr13:38099727-38100227 + 64 9.98e-08 ATGTGATTAC ATTTTATGATTTGTTACAGTTTTATTTGATA GCTAGA chr6:167829467-167829967 - 45 1.13e-07 CCACCAATCA TAGATGATTAATGAAGTTATAAAATTTGAAA ACAGATACTT chr5:59303248-59303748 - 37 1.29e-07 GACGTGAAAC TATGAAATTTTAGAAGATAACTTTGGAAAAA CCCTTCTAGA chr9:123678483-123678983 - 5 1.29e-07 GTTGCTTATC AGTATATTTTGATAAGCTACTTAAATTTTAC AGTA chr5:59649183-59649683 + 50 1.29e-07 AATGGCCTTC AAGATAAGGATAAGTAATTGAAATTGGTTAG GAAAGCAACA chr4:118327814-118328314 - 22 2.13e-07 CACATAATTG TTGCTTGTCTCAATTTATGATTCATTCTTAA GCAAATTTCA chr7:21476368-21476868 + 8 2.13e-07 TAAAGAG ATGTTTATTTAAACTATTTAGGAATGCAAGA TGTCCATAAA chr15:36925591-36926091 - 65 3.06e-07 TCATT AAACCAATTTCACAGCAGTATTGTTTGTTAA TGAGCAGCGG chr18:12520335-12520835 - 70 3.44e-07 . AATGAGATCATTCATCATTTGTAATGTTTAG GGTCCTTGCT chr8:28445334-28445834 - 37 3.44e-07 ATTGTCAGTG AAGCCATTAATTGAGAAAAATAACTTTATGA GGCTTATCAC chr5:126000491-126000991 - 27 3.44e-07 GATACTAACC CATGTTATTAAACTGTCAACATACATTATAC TACAATTTGT chr8:109611203-109611703 + 57 3.88e-07 TAAGTCCACT TATCACATTTAAGCTTTATTTTACTGGTTTG GTCCCTGCTG chr3:42819877-42820377 - 31 4.36e-07 CTGTGATTTG GATCTAATTTAGATGTCAACTACATTTATGA GTCCTCAATT chr10:75379154-75379654 + 58 4.89e-07 CTTGATGCAG TAGATCTGTTTACGAGCTGATTAAATTGTAA GGCCTTGCCT chr7:133492152-133492652 + 3 4.89e-07 GA CAGGAAATATAAAAAGAGGAGTAGTTTTTAT GGAGTGTTAG chr13:37046878-37047378 - 27 5.49e-07 AGCTATTACA GAGCATGTATGAAATTCAAGTACAGTAATAA AAAGTGAGCT chr1:220119042-220119542 + 46 5.49e-07 AGTAAAGTAC AAGGTTTTATGATGGATTTATTGCTTTATGA AGTAAAGCAT chr15:66886241-66886741 - 14 6.15e-07 TGAGTCTGGA AATGTGATAAAAGGATAATCTTGCATAAATG AGCCTATATC chr5:17305900-17306400 - 43 7.71e-07 TGTAACTTGG CATTAAAGGAATCTCTAATTTATTTGTTTAA CACGCAACTG chr16:14326045-14326545 + 29 7.71e-07 TTAAAGCAAC ATGTTATTCTGAGTGATTGCTTAATTTATTG AGCTGCGGCT chr2:19670200-19670700 + 64 7.71e-07 GTAACCTAAC CAGGAAATAAGGGCAGAATGGAATTTTATTA CATGGA chr19:30426000-30426500 + 25 9.61e-07 CTTTAACGGC AATAAAATATCTGCTGTTTATGAGTAATTAG CCACTTCTGG chr13:46674978-46675478 + 14 1.07e-06 TTTGTTAAGA GATGCTGTATAAATGCCATGTGTTATAATTA ACAGGCAGCT chr8:25998500-25999000 - 46 1.19e-06 TGTTATCCCT GAGATGATAATTTGAGTTATTTCTTTGTTAA CCTTTACACA chr17:43671132-43671632 + 60 1.19e-06 AATGGatgag atacttgggtaaactgaatattctttgtaac ttaaagttaa chr8:37302587-37303087 - 39 1.64e-06 TAAGCTTGTC CTGGAAGTGTTATTGGCATTCTAATGATTTA TTGCATGTTC chr5:96745702-96746202 - 51 1.64e-06 CACCAGAGAA AAGTAAATAAAAGATCCTTTGAAGACAGTAA GCACAGTGCA chr1:150876744-150877244 + 8 1.83e-06 TAACGTC ATTGAAATGCAATTAAAATGGGTATTTTAgg ctgggcgcgg chr5:124740922-124741422 - 62 2.02e-06 TCTACTCC TTTATGTGGAAACCACAAGTATGTTGTAAAA GTCGCCACTC chrX:12240420-12240920 + 52 2.24e-06 TTATGGGGCT TTTTATAGATCAAGATAAGCAATGTGATTAA AACAGCAGGG chr1:164223311-164223811 - 57 2.24e-06 TAGAAGAGTT TTTATGATGTTATCTTCTAGGATTTTTATGG TTTCAGGTCT chr21:41783480-41783980 - 61 2.48e-06 GCTTGATTT ATGACAGGTTCACATAATTGCTTTCTTTATA CAACAGGCTT chr5:90296972-90297472 + 49 2.48e-06 TTAGAAGCCT TTTCCATTGTTACAATAAGAGGAAATCACAA GAAAGATTAA chr12:106074987-10607548 - 10 2.48e-06 GATTTCTATT AATCTTGTGTCAGTGGCAATGACAGTTTTAC TGGGAGAGG chr10:74833322-74833822 - 33 2.48e-06 TCCCTAGCAA AGATTAGTTTCAACATCATCATCATAAATTA GTAGAGACAG chr6:82072025-82072525 - 57 2.75e-06 AAGAGTTACT GTGCTAATAAAAATATAATGAGGTCTAGTTC CCTGGTGCTG chr13:87123939-87124439 - 14 2.75e-06 GTGGACAAAG TGTCTTAGGCAACAGTAATTATAAATGGTGA CTCATGTGGT chr5:125550184-125550684 + 34 3.04e-06 CCTTGCTGAC AGTTTAAGATAAAGTAAATTGGAAGTGACAT AAAAGGgtgt chr2:196853462-196853962 - 7 3.70e-06 CACAGGAAAT TATCCTATAAAACATCAGTACTGTGTAATTC CCTGTG chr4:147768130-147768630 + 56 3.70e-06 GAGTGTCTGG AAACATTGTAAACCTGTCAAATAATTCTAAA GATTCCGCTG chr10:33388296-33388796 + 34 4.08e-06 GATAACAGCC AAGAAAAGGCAACTTTATTGCTTTCTTGCAA ACAAGCCAAG chr19:34184879-34185379 + 56 4.08e-06 TTTTCAGTCG AAGATGATGTAACCTCTAGAGTTAAGTGCGA AGAAGTTGAT chr6:70270266-70270766 - 61 4.50e-06 GAGACTGGA ATGCCTTTATTACTCTCATTTTGTAGAACTA ATTGGATTAC chr22:24727092-24727592 - 5 4.95e-06 TAAAGGAGCT CATGTAATTACAAATGACTCATTTGGAAAAC TTTT chr1:167658524-167659024 - 11 4.95e-06 ATCCACATAA CAGGTTATTAGGAAACCATTAAAAAGAATGA ACTAGGCCAG chr10:16686026-16686526 - 7 5.44e-06 AAGTGGCGCT TTTATAATCAAACAAAACTGTTTGTGGTTTC TAATCT chr2:238881199-238881699 + 14 5.98e-06 gtcagtgtca gtgttagtgttagtattagtgtcggtattta ttagtattag chr6:100592898-100593398 + 21 6.56e-06 AATATTTACA ATGCTGTTAACAGGTGCTGAGTTGTTTAATG ATTCTAATAG chr18:23684579-23685079 + 8 6.56e-06 CACTTAA TGTACCTTGACATCGCAAAGTTATTTTTAAA CTGCAATGAC chrX:136057546-136058046 + 61 6.56e-06 TTTCCAATAA AAAGTTTTATTAGGTGTTGTCACAGATATAA ATGTTTCAT chr9:85743152-85743652 - 21 7.20e-06 AATCATTTCA AAGCTATGTAATGCTGCTATTTATCTTGTGT GGGTTAATCT chr13:79918520-79919020 - 5 7.20e-06 ACATGCCTGG CTTCCCTTTTCATAAAATTGAAGATGATTTA TTAC chr4:80307271-80307771 - 25 8.64e-06 GCAGGGAAGC AAGGTTATGAATGGTACTACATGTAAATCAA AGTAATTAGA chr3:16482928-16483428 - 17 9.46e-06 TTCCTTAATG AGGTATTTATTACCTCTCTGTAAATATGATA CCTGCAGTTT chr8:37360445-37360945 + 23 1.13e-05 AATGAGAGCC AATAAAGGGTGAATTGCAGCTGAAATTACAC TGTTTATATG chr2:177038716-177039216 - 15 1.35e-05 TCGTAATATT TGTTCAATTTAACTACTATGTACTGTAAAGT ATCGTAAAAA chr19:17624278-17624778 + 21 1.35e-05 TGACCTTTGA AAGCTATTTTGACCTACATGTGACCTCTATG ACTTTAGTGG chr19:40612257-40612757 - 65 1.35e-05 AGTCA AGGTTATGGTCAGTGCTATGGTTAGTGGTTA TGATTAGGGT chr19:30004318-30004818 + 40 1.47e-05 GGGGAGGAGG TATCATATCACTGTCTATTATTCTTTATCAG CGCTTGGCCA chr17:39800990-39801490 - 55 1.60e-05 CAGTGGCATC ATTAAAATGCCACATTAAGATGATTAAGCTT CTTTGTTATC chr4:143857512-143858012 - 16 1.74e-05 GCGCAAAGAG ATACTCTGTTATCAAAAAATGGCTAGATTAA CGCCCAGTAG chr19:34218137-34218637 + 23 1.89e-05 CTTGTGGCCG AGGCATTTTTAATAGTAGAGGTGAATGTTTC AAACATCCTA chr13:75903918-75904418 - 10 1.89e-05 GAGGGAACCA GATAAGATACCTCATAAAGAAGATAGGATTA CAAGCAAGG chr12:806366-806866 + 67 2.42e-05 AGTTGTGGCT TTTATTAGTTTGTGACCATGGAAATGAGATA TGG chr21:17454350-17454850 + 11 3.33e-05 GAAATGCTAT ATGGGAGGAAAACTAGTGTCTTTTGTGATAA AGGATGGTCA chr6:2028574-2029074 + 56 4.21e-05 TAATAGAGGC TAGTAAATACTAACGACTATATTCCAGTTAA CAGCTGTAAT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AWKNWWWTDWHAVNWNHWTNDTWWWTWWTWA MEME-5 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr19:33293292-33293792 5e-09 8_[+5]_61 chr19:93551-94051 5e-09 4_[-5]_65 chr5:76585788-76586288 1.9e-08 36_[-5]_33 chr15:67792429-67792929 5.9e-08 57_[+5]_12 chr5:27510984-27511484 7.7e-08 41_[-5]_28 chr1:87718277-87718777 8.8e-08 49_[-5]_20 chr13:38099727-38100227 1e-07 63_[+5]_6 chr6:167829467-167829967 1.1e-07 44_[-5]_25 chr5:59303248-59303748 1.3e-07 36_[-5]_33 chr9:123678483-123678983 1.3e-07 4_[-5]_65 chr5:59649183-59649683 1.3e-07 49_[+5]_20 chr4:118327814-118328314 2.1e-07 21_[-5]_48 chr7:21476368-21476868 2.1e-07 7_[+5]_62 chr15:36925591-36926091 3.1e-07 64_[-5]_5 chr18:12520335-12520835 3.4e-07 69_[-5] chr8:28445334-28445834 3.4e-07 36_[-5]_33 chr5:126000491-126000991 3.4e-07 26_[-5]_43 chr8:109611203-109611703 3.9e-07 56_[+5]_13 chr3:42819877-42820377 4.4e-07 30_[-5]_39 chr10:75379154-75379654 4.9e-07 57_[+5]_12 chr7:133492152-133492652 4.9e-07 2_[+5]_67 chr13:37046878-37047378 5.5e-07 26_[-5]_43 chr1:220119042-220119542 5.5e-07 45_[+5]_24 chr15:66886241-66886741 6.2e-07 13_[-5]_56 chr5:17305900-17306400 7.7e-07 42_[-5]_27 chr16:14326045-14326545 7.7e-07 28_[+5]_41 chr2:19670200-19670700 7.7e-07 63_[+5]_6 chr19:30426000-30426500 9.6e-07 24_[+5]_45 chr13:46674978-46675478 1.1e-06 13_[+5]_56 chr8:25998500-25999000 1.2e-06 45_[-5]_24 chr17:43671132-43671632 1.2e-06 59_[+5]_10 chr8:37302587-37303087 1.6e-06 38_[-5]_31 chr5:96745702-96746202 1.6e-06 50_[-5]_19 chr1:150876744-150877244 1.8e-06 7_[+5]_62 chr5:124740922-124741422 2e-06 61_[-5]_8 chrX:12240420-12240920 2.2e-06 51_[+5]_18 chr1:164223311-164223811 2.2e-06 56_[-5]_13 chr21:41783480-41783980 2.5e-06 60_[-5]_9 chr5:90296972-90297472 2.5e-06 48_[+5]_21 chr12:106074987-10607548 2.5e-06 9_[-5]_60 chr10:74833322-74833822 2.5e-06 32_[-5]_37 chr6:82072025-82072525 2.7e-06 56_[-5]_13 chr13:87123939-87124439 2.7e-06 13_[-5]_56 chr5:125550184-125550684 3e-06 33_[+5]_36 chr2:196853462-196853962 3.7e-06 6_[-5]_63 chr4:147768130-147768630 3.7e-06 55_[+5]_14 chr10:33388296-33388796 4.1e-06 33_[+5]_36 chr19:34184879-34185379 4.1e-06 55_[+5]_14 chr6:70270266-70270766 4.5e-06 60_[-5]_9 chr22:24727092-24727592 4.9e-06 4_[-5]_65 chr1:167658524-167659024 4.9e-06 10_[-5]_59 chr10:16686026-16686526 5.4e-06 6_[-5]_63 chr2:238881199-238881699 6e-06 13_[+5]_56 chr6:100592898-100593398 6.6e-06 20_[+5]_49 chr18:23684579-23685079 6.6e-06 7_[+5]_62 chrX:136057546-136058046 6.6e-06 60_[+5]_9 chr9:85743152-85743652 7.2e-06 20_[-5]_49 chr13:79918520-79919020 7.2e-06 4_[-5]_65 chr4:80307271-80307771 8.6e-06 24_[-5]_45 chr3:16482928-16483428 9.5e-06 16_[-5]_53 chr8:37360445-37360945 1.1e-05 22_[+5]_47 chr2:177038716-177039216 1.3e-05 14_[-5]_55 chr19:17624278-17624778 1.3e-05 20_[+5]_49 chr19:40612257-40612757 1.3e-05 64_[-5]_5 chr19:30004318-30004818 1.5e-05 39_[+5]_30 chr17:39800990-39801490 1.6e-05 54_[-5]_15 chr4:143857512-143858012 1.7e-05 15_[-5]_54 chr19:34218137-34218637 1.9e-05 22_[+5]_47 chr13:75903918-75904418 1.9e-05 9_[-5]_60 chr12:806366-806866 2.4e-05 66_[+5]_3 chr21:17454350-17454850 3.3e-05 10_[+5]_59 chr6:2028574-2029074 4.2e-05 55_[+5]_14 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AWKNWWWTDWHAVNWNHWTNDTWWWTWWTWA MEME-5 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF AWKNWWWTDWHAVNWNHWTNDTWWWTWWTWA width=31 seqs=72 chr19:33293292-33293792 ( 9) AATCAAATAAAACGTGTTTGCAAATTGTAAA 1 chr19:93551-94051 ( 5) AATTAGATCATAAGTTATTTATTAATTATTA 1 chr5:76585788-76586288 ( 37) CTGACATTTTCAAAACCATAATATTTTATGA 1 chr15:67792429-67792929 ( 58) AATGGTATTAAAAATCAAGATGAAGTTGTAA 1 chr5:27510984-27511484 ( 42) GAGGTTAGTAAAAATTTATTATCTTTCTTGA 1 chr1:87718277-87718777 ( 50) ATTGTTTTATAGGATGCTATTTAGATAAAAA 1 chr13:38099727-38100227 ( 64) ATTTTATGATTTGTTACAGTTTTATTTGATA 1 chr6:167829467-167829967 ( 45) TAGATGATTAATGAAGTTATAAAATTTGAAA 1 chr5:59303248-59303748 ( 37) TATGAAATTTTAGAAGATAACTTTGGAAAAA 1 chr9:123678483-123678983 ( 5) AGTATATTTTGATAAGCTACTTAAATTTTAC 1 chr5:59649183-59649683 ( 50) AAGATAAGGATAAGTAATTGAAATTGGTTAG 1 chr4:118327814-118328314 ( 22) TTGCTTGTCTCAATTTATGATTCATTCTTAA 1 chr7:21476368-21476868 ( 8) ATGTTTATTTAAACTATTTAGGAATGCAAGA 1 chr15:36925591-36926091 ( 65) AAACCAATTTCACAGCAGTATTGTTTGTTAA 1 chr18:12520335-12520835 ( 70) AATGAGATCATTCATCATTTGTAATGTTTAG 1 chr8:28445334-28445834 ( 37) AAGCCATTAATTGAGAAAAATAACTTTATGA 1 chr5:126000491-126000991 ( 27) CATGTTATTAAACTGTCAACATACATTATAC 1 chr8:109611203-109611703 ( 57) TATCACATTTAAGCTTTATTTTACTGGTTTG 1 chr3:42819877-42820377 ( 31) GATCTAATTTAGATGTCAACTACATTTATGA 1 chr10:75379154-75379654 ( 58) TAGATCTGTTTACGAGCTGATTAAATTGTAA 1 chr7:133492152-133492652 ( 3) CAGGAAATATAAAAAGAGGAGTAGTTTTTAT 1 chr13:37046878-37047378 ( 27) GAGCATGTATGAAATTCAAGTACAGTAATAA 1 chr1:220119042-220119542 ( 46) AAGGTTTTATGATGGATTTATTGCTTTATGA 1 chr15:66886241-66886741 ( 14) AATGTGATAAAAGGATAATCTTGCATAAATG 1 chr5:17305900-17306400 ( 43) CATTAAAGGAATCTCTAATTTATTTGTTTAA 1 chr16:14326045-14326545 ( 29) ATGTTATTCTGAGTGATTGCTTAATTTATTG 1 chr2:19670200-19670700 ( 64) CAGGAAATAAGGGCAGAATGGAATTTTATTA 1 chr19:30426000-30426500 ( 25) AATAAAATATCTGCTGTTTATGAGTAATTAG 1 chr13:46674978-46675478 ( 14) GATGCTGTATAAATGCCATGTGTTATAATTA 1 chr8:25998500-25999000 ( 46) GAGATGATAATTTGAGTTATTTCTTTGTTAA 1 chr17:43671132-43671632 ( 60) ATACTTGGGTAAACTGAATATTCTTTGTAAC 1 chr8:37302587-37303087 ( 39) CTGGAAGTGTTATTGGCATTCTAATGATTTA 1 chr5:96745702-96746202 ( 51) AAGTAAATAAAAGATCCTTTGAAGACAGTAA 1 chr1:150876744-150877244 ( 8) ATTGAAATGCAATTAAAATGGGTATTTTAGG 1 chr5:124740922-124741422 ( 62) TTTATGTGGAAACCACAAGTATGTTGTAAAA 1 chrX:12240420-12240920 ( 52) TTTTATAGATCAAGATAAGCAATGTGATTAA 1 chr1:164223311-164223811 ( 57) TTTATGATGTTATCTTCTAGGATTTTTATGG 1 chr21:41783480-41783980 ( 61) ATGACAGGTTCACATAATTGCTTTCTTTATA 1 chr5:90296972-90297472 ( 49) TTTCCATTGTTACAATAAGAGGAAATCACAA 1 chr12:106074987-10607548 ( 10) AATCTTGTGTCAGTGGCAATGACAGTTTTAC 1 chr10:74833322-74833822 ( 33) AGATTAGTTTCAACATCATCATCATAAATTA 1 chr6:82072025-82072525 ( 57) GTGCTAATAAAAATATAATGAGGTCTAGTTC 1 chr13:87123939-87124439 ( 14) TGTCTTAGGCAACAGTAATTATAAATGGTGA 1 chr5:125550184-125550684 ( 34) AGTTTAAGATAAAGTAAATTGGAAGTGACAT 1 chr2:196853462-196853962 ( 7) TATCCTATAAAACATCAGTACTGTGTAATTC 1 chr4:147768130-147768630 ( 56) AAACATTGTAAACCTGTCAAATAATTCTAAA 1 chr10:33388296-33388796 ( 34) AAGAAAAGGCAACTTTATTGCTTTCTTGCAA 1 chr19:34184879-34185379 ( 56) AAGATGATGTAACCTCTAGAGTTAAGTGCGA 1 chr6:70270266-70270766 ( 61) ATGCCTTTATTACTCTCATTTTGTAGAACTA 1 chr22:24727092-24727592 ( 5) CATGTAATTACAAATGACTCATTTGGAAAAC 1 chr1:167658524-167659024 ( 11) CAGGTTATTAGGAAACCATTAAAAAGAATGA 1 chr10:16686026-16686526 ( 7) TTTATAATCAAACAAAACTGTTTGTGGTTTC 1 chr2:238881199-238881699 ( 14) GTGTTAGTGTTAGTATTAGTGTCGGTATTTA 1 chr6:100592898-100593398 ( 21) ATGCTGTTAACAGGTGCTGAGTTGTTTAATG 1 chr18:23684579-23685079 ( 8) TGTACCTTGACATCGCAAAGTTATTTTTAAA 1 chrX:136057546-136058046 ( 61) AAAGTTTTATTAGGTGTTGTCACAGATATAA 1 chr9:85743152-85743652 ( 21) AAGCTATGTAATGCTGCTATTTATCTTGTGT 1 chr13:79918520-79919020 ( 5) CTTCCCTTTTCATAAAATTGAAGATGATTTA 1 chr4:80307271-80307771 ( 25) AAGGTTATGAATGGTACTACATGTAAATCAA 1 chr3:16482928-16483428 ( 17) AGGTATTTATTACCTCTCTGTAAATATGATA 1 chr8:37360445-37360945 ( 23) AATAAAGGGTGAATTGCAGCTGAAATTACAC 1 chr2:177038716-177039216 ( 15) TGTTCAATTTAACTACTATGTACTGTAAAGT 1 chr19:17624278-17624778 ( 21) AAGCTATTTTGACCTACATGTGACCTCTATG 1 chr19:40612257-40612757 ( 65) AGGTTATGGTCAGTGCTATGGTTAGTGGTTA 1 chr19:30004318-30004818 ( 40) TATCATATCACTGTCTATTATTCTTTATCAG 1 chr17:39800990-39801490 ( 55) ATTAAAATGCCACATTAAGATGATTAAGCTT 1 chr4:143857512-143858012 ( 16) ATACTCTGTTATCAAAAAATGGCTAGATTAA 1 chr19:34218137-34218637 ( 23) AGGCATTTTTAATAGTAGAGGTGAATGTTTC 1 chr13:75903918-75904418 ( 10) GATAAGATACCTCATAAAGAAGATAGGATTA 1 chr12:806366-806866 ( 67) TTTATTAGTTTGTGACCATGGAAATGAGATA 1 chr21:17454350-17454850 ( 11) ATGGGAGGAAAACTAGTGTCTTTTGTGATAA 1 chr6:2028574-2029074 ( 56) TAGTAAATACTAACGACTATATTCCAGTTAA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AWKNWWWTDWHAVNWNHWTNDTWWWTWWTWA MEME-5 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 31 n= 42000 bayes= 10.0348 E= 9.1e-022 132 -121 -138 16 136 -1281 -121 65 -134 -1281 62 116 24 8 -21 -12 59 -92 -337 124 116 -205 -105 59 136 -1281 -92 53 -1281 -1281 -13 180 65 -179 -21 65 82 -179 -1281 136 102 -38 -138 16 185 -1281 -205 -35 39 15 -13 -61 71 -47 -68 32 59 -279 -57 107 7 -47 -5 46 107 15 -1281 16 128 -237 -205 77 24 -1281 -38 132 39 -92 -13 53 24 -157 -29 98 24 -1281 -68 143 107 -68 -105 16 98 -157 -138 82 24 -179 -79 124 -112 -437 -21 159 59 -179 -57 93 93 -1281 -57 93 32 -121 -1281 153 120 -1281 -68 65 159 -105 -92 -161 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AWKNWWWTDWHAVNWNHWTNDTWWWTWWTWA MEME-5 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 31 nsites= 72 E= 9.1e-022 0.527778 0.125000 0.111111 0.236111 0.541667 0.000000 0.125000 0.333333 0.083333 0.000000 0.444444 0.472222 0.250000 0.305556 0.250000 0.194444 0.319444 0.152778 0.027778 0.500000 0.472222 0.069444 0.138889 0.319444 0.541667 0.000000 0.152778 0.305556 0.000000 0.000000 0.263889 0.736111 0.333333 0.083333 0.250000 0.333333 0.375000 0.083333 0.000000 0.541667 0.430556 0.222222 0.111111 0.236111 0.763889 0.000000 0.069444 0.166667 0.277778 0.319444 0.263889 0.138889 0.347222 0.208333 0.180556 0.263889 0.319444 0.041667 0.194444 0.444444 0.222222 0.208333 0.277778 0.291667 0.444444 0.319444 0.000000 0.236111 0.513889 0.055556 0.069444 0.361111 0.250000 0.000000 0.222222 0.527778 0.277778 0.152778 0.263889 0.305556 0.250000 0.097222 0.236111 0.416667 0.250000 0.000000 0.180556 0.569444 0.444444 0.180556 0.138889 0.236111 0.416667 0.097222 0.111111 0.375000 0.250000 0.083333 0.166667 0.500000 0.097222 0.013889 0.250000 0.638889 0.319444 0.083333 0.194444 0.402778 0.402778 0.000000 0.194444 0.402778 0.263889 0.125000 0.000000 0.611111 0.486111 0.000000 0.180556 0.333333 0.638889 0.138889 0.152778 0.069444 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AWKNWWWTDWHAVNWNHWTNDTWWWTWWTWA MEME-5 regular expression -------------------------------------------------------------------------------- [AT][AT][TG][CAG][TA][AT][AT][TG][ATG][TA][ATC]A[CAG][ATC][TA][TGAC][ACT][AT][TAG][TAG][TAG][TA][AT][AT][TA][TG][TA][AT][TA][AT]A -------------------------------------------------------------------------------- Time 1545.92 secs. ******************************************************************************** ******************************************************************************** MOTIF AGAGRGWGAGAGAGAGRKAGRG MEME-6 width = 22 sites = 17 llr = 295 E-value = 4.7e-015 ******************************************************************************** -------------------------------------------------------------------------------- Motif AGAGRGWGAGAGAGAGRKAGRG MEME-6 Description -------------------------------------------------------------------------------- Simplified A 618:5:6:8282617:527163 pos.-specific C :::1:2::2::12::1:::::: probability G 29:948:9:8161939551947 matrix T 2:2:1:41::111::::32::: bits 2.2 2.0 1.8 1.6 *** * * * * Relative 1.3 *** *** *** * Entropy 1.1 *** ***** **** **** (25.0 bits) 0.9 **** ****** **** **** 0.7 *********** ***** **** 0.4 *********** ********** 0.2 ********************** 0.0 ---------------------- Multilevel AGAGAGAGAGAGAGAGAGAGAG consensus GCT CA G GT GA sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AGAGRGWGAGAGAGAGRKAGRG MEME-6 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ---------------------- chr1:155244574-155245074 + 77 4.40e-14 agagcgagcg agagagagagagagagagagag ga chr7:100478119-100478619 + 5 4.40e-14 gggg agagagagagagagagagagag agagagtgtg chr11:120347010-12034751 - 36 2.12e-13 ACACACAGAC AGAGAGAGAGAGAGAGAGAGAA ACAGAGAGAG chr3:17742304-17742804 - 35 2.16e-11 CCCTGCAGAC TGAGGGAGAGAGAGAGAAAGAG GAGGGGAGGA chr1:155000893-155001393 + 34 8.16e-11 CCCGGCGCGG Agagggagagagggagaaagag ggagggaggg chr12:54359083-54359583 + 75 1.08e-10 TCTGCCTGTA AGAGACAGCGAAAGAGAGAGAG CGTG chr11:73376950-73377450 + 28 2.39e-09 CCCGTTACTG TGAGTGTGAAATAGAGGGAGAG GAGCCCAAGT chr9:137516842-137517342 - 54 1.10e-08 GACAGAGTGG AGTGAGTGAGTGAGGGATGGAG TGGACAGAGT chr17:47649625-47650125 - 78 1.40e-08 G GGAGGGAGCGAGGGAGGGAGGA AGGCGGAGGG chr19:40590361-40590861 - 19 1.77e-08 CATGGGGGCC AGAGGCTGAGACAGGGGTTGAA AAACAAGGGC chr4:190122275-190122775 + 2 3.68e-08 g tgagggtgagggtgagggtgag ggtgagggtg chr20:48921349-48921849 - 42 4.52e-08 CAGGTGGGCG AGAGACAGAAGGCGAGGGTGGA GGGTGGAAGA chr17:50866476-50866976 + 20 6.70e-08 CAGACGTGCC AATGAGAGAGAAAGGGGTGGGG TAGGGCGGCT chr12:1661866-1662366 - 40 8.59e-08 CCAGCTCTGC AGTGGGAGAAAACAGGAGAGGG CTGGACAGCG chr19:8389643-8390143 + 35 1.30e-07 aTATAGAGAT GGAGACTGCAACCGAGAAAGGG GACCCAGCGC chr14:101761027-10176152 - 69 1.62e-07 TGGAGGCGCA AGACAGAGCGTGAGACGTAGGA AATGCACATT chr7:133492152-133492652 + 34 2.59e-07 TAGTTTTTAT GGAGTGTTAGATAGGGGTAAAG ATAGCATTTC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AGAGRGWGAGAGAGAGRKAGRG MEME-6 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr1:155244574-155245074 4.4e-14 76_[+6]_2 chr7:100478119-100478619 4.4e-14 4_[+6]_74 chr11:120347010-12034751 2.1e-13 35_[-6]_43 chr3:17742304-17742804 2.2e-11 34_[-6]_44 chr1:155000893-155001393 8.2e-11 33_[+6]_45 chr12:54359083-54359583 1.1e-10 74_[+6]_4 chr11:73376950-73377450 2.4e-09 27_[+6]_51 chr9:137516842-137517342 1.1e-08 53_[-6]_25 chr17:47649625-47650125 1.4e-08 77_[-6]_1 chr19:40590361-40590861 1.8e-08 18_[-6]_60 chr4:190122275-190122775 3.7e-08 1_[+6]_77 chr20:48921349-48921849 4.5e-08 41_[-6]_37 chr17:50866476-50866976 6.7e-08 19_[+6]_59 chr12:1661866-1662366 8.6e-08 39_[-6]_39 chr19:8389643-8390143 1.3e-07 34_[+6]_44 chr14:101761027-10176152 1.6e-07 68_[-6]_10 chr7:133492152-133492652 2.6e-07 33_[+6]_45 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AGAGRGWGAGAGAGAGRKAGRG MEME-6 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF AGAGRGWGAGAGAGAGRKAGRG width=22 seqs=17 chr1:155244574-155245074 ( 77) AGAGAGAGAGAGAGAGAGAGAG 1 chr7:100478119-100478619 ( 5) AGAGAGAGAGAGAGAGAGAGAG 1 chr11:120347010-12034751 ( 36) AGAGAGAGAGAGAGAGAGAGAA 1 chr3:17742304-17742804 ( 35) TGAGGGAGAGAGAGAGAAAGAG 1 chr1:155000893-155001393 ( 34) AGAGGGAGAGAGGGAGAAAGAG 1 chr12:54359083-54359583 ( 75) AGAGACAGCGAAAGAGAGAGAG 1 chr11:73376950-73377450 ( 28) TGAGTGTGAAATAGAGGGAGAG 1 chr9:137516842-137517342 ( 54) AGTGAGTGAGTGAGGGATGGAG 1 chr17:47649625-47650125 ( 78) GGAGGGAGCGAGGGAGGGAGGA 1 chr19:40590361-40590861 ( 19) AGAGGCTGAGACAGGGGTTGAA 1 chr4:190122275-190122775 ( 2) TGAGGGTGAGGGTGAGGGTGAG 1 chr20:48921349-48921849 ( 42) AGAGACAGAAGGCGAGGGTGGA 1 chr17:50866476-50866976 ( 20) AATGAGAGAGAAAGGGGTGGGG 1 chr12:1661866-1662366 ( 40) AGTGGGAGAAAACAGGAGAGGG 1 chr19:8389643-8390143 ( 35) GGAGACTGCAACCGAGAAAGGG 1 chr14:101761027-10176152 ( 69) AGACAGAGCGTGAGACGTAGGA 1 chr7:133492152-133492652 ( 34) GGAGTGTTAGATAGGGGTAAAG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AGAGRGWGAGAGAGAGRKAGRG MEME-6 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 22 n= 47400 bayes= 12.8099 E= 4.7e-015 161 -1073 -71 -26 -185 -1073 171 -1073 196 -1073 -1073 -26 -1073 -229 171 -1073 132 -1073 29 -85 -1073 -29 141 -1073 161 -1073 -1073 74 -1073 -1073 171 -185 185 -29 -1073 -1073 15 -1073 141 -1073 185 -1073 -129 -85 -26 -129 103 -85 161 -71 -129 -185 -185 -1073 171 -1073 174 -1073 3 -1073 -1073 -229 171 -1073 132 -1073 71 -1073 -26 -1073 88 47 174 -1073 -129 -26 -185 -1073 171 -1073 161 -1073 29 -1073 47 -1073 129 -1073 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AGAGRGWGAGAGAGAGRKAGRG MEME-6 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 22 nsites= 17 E= 4.7e-015 0.647059 0.000000 0.176471 0.176471 0.058824 0.000000 0.941176 0.000000 0.823529 0.000000 0.000000 0.176471 0.000000 0.058824 0.941176 0.000000 0.529412 0.000000 0.352941 0.117647 0.000000 0.235294 0.764706 0.000000 0.647059 0.000000 0.000000 0.352941 0.000000 0.000000 0.941176 0.058824 0.764706 0.235294 0.000000 0.000000 0.235294 0.000000 0.764706 0.000000 0.764706 0.000000 0.117647 0.117647 0.176471 0.117647 0.588235 0.117647 0.647059 0.176471 0.117647 0.058824 0.058824 0.000000 0.941176 0.000000 0.705882 0.000000 0.294118 0.000000 0.000000 0.058824 0.941176 0.000000 0.529412 0.000000 0.470588 0.000000 0.176471 0.000000 0.529412 0.294118 0.705882 0.000000 0.117647 0.176471 0.058824 0.000000 0.941176 0.000000 0.647059 0.000000 0.352941 0.000000 0.294118 0.000000 0.705882 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AGAGRGWGAGAGAGAGRKAGRG MEME-6 regular expression -------------------------------------------------------------------------------- AGAG[AG][GC][AT]G[AC][GA]AGAG[AG]G[AG][GT]AG[AG][GA] -------------------------------------------------------------------------------- Time 1809.86 secs. ******************************************************************************** ******************************************************************************** MOTIF ACCCTGACCCNDAMCC MEME-7 width = 16 sites = 15 llr = 223 E-value = 2.2e-004 ******************************************************************************** -------------------------------------------------------------------------------- Motif ACCCTGACCCNDAMCC MEME-7 Description -------------------------------------------------------------------------------- Simplified A a::::391::2493:: pos.-specific C :a89:::7a72::799 probability G :::1:711:124:::1 matrix T ::2:a::::2421:1: bits 2.2 * * 2.0 * * 1.8 ** * * * 1.6 ** * * * * * Relative 1.3 ** ** * * * ** Entropy 1.1 ******* * **** (21.5 bits) 0.9 ******* ** **** 0.7 ********** **** 0.4 ********** ***** 0.2 **************** 0.0 ---------------- Multilevel ACCCTGACCCTAACCC consensus T A TAG A sequence CT G -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ACCCTGACCCNDAMCC MEME-7 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ---------------- chr5:49421-49921 - 48 3.56e-10 CCTGACCCTG ACCCTGACCCTAACCC GGAAGTGCTG chr16:19536-20036 + 64 1.10e-09 cctgactctg accctgaccctgaccc tgactctaac chrX:156019633-156020133 - 30 1.10e-09 CTTGACCCTG ACCCTGACCCTGACCC TTGACCCTGA chr7:159013209-159013709 - 81 5.49e-09 CTCA ACCCTGACCCCAACCC AACCCAGACC chr3:198173490-198173990 - 5 5.49e-09 CCTGACCCTG ACCCTGACCCTTAACC CTTA chr2:131803162-131803662 - 56 1.69e-08 CTAACTGCTA ACCCTAACCCCAACCC TCACCCTAAC chr19:727090-727590 + 84 2.56e-08 cctgaccttg actctgacccagaccc t chr1:227791310-227791810 + 78 2.56e-08 ccaggctcta accctaacccagaacc tgacctt chr4:705073-705573 + 24 1.56e-07 cctaatgctg accctagccctaaacc cagtcctaac chr11:65551579-65552079 - 12 2.29e-07 CAGATATTTG ACCCTGAGCTATAACC TCCTAAGCCT chr19:42349668-42350168 + 14 2.53e-07 ctgcctatag accctaacctgatccc atattttgac chr19:48444277-48444777 + 15 2.97e-07 CTGACCCCAA ACTGTGACCCGAACCC CAGACTGTGC chr16:30786940-30787440 - 29 5.22e-07 CGTCCCAGTC ACCCTGAACTGGTCCC CGGGTCCTCA chr19:19634170-19634670 - 7 5.89e-07 TGTTTTCTGA ACTCTGAACCTTAATC CATGAT chr17:41688971-41689471 + 66 1.81e-06 CCGGGGTCGG ACCCTGAGCGCGACCG GAAGGAGCAG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ACCCTGACCCNDAMCC MEME-7 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr5:49421-49921 3.6e-10 47_[-7]_37 chr16:19536-20036 1.1e-09 63_[+7]_21 chrX:156019633-156020133 1.1e-09 29_[-7]_55 chr7:159013209-159013709 5.5e-09 80_[-7]_4 chr3:198173490-198173990 5.5e-09 4_[-7]_80 chr2:131803162-131803662 1.7e-08 55_[-7]_29 chr19:727090-727590 2.6e-08 83_[+7]_1 chr1:227791310-227791810 2.6e-08 77_[+7]_7 chr4:705073-705573 1.6e-07 23_[+7]_61 chr11:65551579-65552079 2.3e-07 11_[-7]_73 chr19:42349668-42350168 2.5e-07 13_[+7]_71 chr19:48444277-48444777 3e-07 14_[+7]_70 chr16:30786940-30787440 5.2e-07 28_[-7]_56 chr19:19634170-19634670 5.9e-07 6_[-7]_78 chr17:41688971-41689471 1.8e-06 65_[+7]_19 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ACCCTGACCCNDAMCC MEME-7 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF ACCCTGACCCNDAMCC width=16 seqs=15 chr5:49421-49921 ( 48) ACCCTGACCCTAACCC 1 chr16:19536-20036 ( 64) ACCCTGACCCTGACCC 1 chrX:156019633-156020133 ( 30) ACCCTGACCCTGACCC 1 chr7:159013209-159013709 ( 81) ACCCTGACCCCAACCC 1 chr3:198173490-198173990 ( 5) ACCCTGACCCTTAACC 1 chr2:131803162-131803662 ( 56) ACCCTAACCCCAACCC 1 chr19:727090-727590 ( 84) ACTCTGACCCAGACCC 1 chr1:227791310-227791810 ( 78) ACCCTAACCCAGAACC 1 chr4:705073-705573 ( 24) ACCCTAGCCCTAAACC 1 chr11:65551579-65552079 ( 12) ACCCTGAGCTATAACC 1 chr19:42349668-42350168 ( 14) ACCCTAACCTGATCCC 1 chr19:48444277-48444777 ( 15) ACTGTGACCCGAACCC 1 chr16:30786940-30787440 ( 29) ACCCTGAACTGGTCCC 1 chr19:19634170-19634670 ( 7) ACTCTGAACCTTAATC 1 chr17:41688971-41689471 ( 66) ACCCTGAGCGCGACCG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ACCCTGACCCNDAMCC MEME-7 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 16 n= 51000 bayes= 12.4053 E= 2.2e-004 224 -1055 -1055 -1055 -1055 179 -1055 -1055 -1055 147 -1055 -8 -1055 169 -211 -1055 -1055 -1055 -1055 224 33 -1055 135 -1055 214 -1055 -211 -1055 -67 135 -111 -1055 -1055 179 -1055 -1055 -1055 135 -211 -8 -8 -53 -53 92 92 -1055 47 -8 203 -1055 -1055 -67 65 121 -1055 -1055 -1055 169 -1055 -166 -1055 169 -211 -1055 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ACCCTGACCCNDAMCC MEME-7 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 16 nsites= 15 E= 2.2e-004 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.800000 0.000000 0.200000 0.000000 0.933333 0.066667 0.000000 0.000000 0.000000 0.000000 1.000000 0.266667 0.000000 0.733333 0.000000 0.933333 0.000000 0.066667 0.000000 0.133333 0.733333 0.133333 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.733333 0.066667 0.200000 0.200000 0.200000 0.200000 0.400000 0.400000 0.000000 0.400000 0.200000 0.866667 0.000000 0.000000 0.133333 0.333333 0.666667 0.000000 0.000000 0.000000 0.933333 0.000000 0.066667 0.000000 0.933333 0.066667 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ACCCTGACCCNDAMCC MEME-7 regular expression -------------------------------------------------------------------------------- AC[CT]CT[GA]ACC[CT][TACG][AGT]A[CA]CC -------------------------------------------------------------------------------- Time 2071.58 secs. ******************************************************************************** ******************************************************************************** MOTIF AGSHGKAGKGRGAGGTCACWSWGAGGTYAM MEME-8 width = 30 sites = 9 llr = 207 E-value = 1.2e-002 ******************************************************************************** -------------------------------------------------------------------------------- Motif AGSHGKAGKGRGAGGTCACWSWGAGGTYAM MEME-8 Description -------------------------------------------------------------------------------- Simplified A 8::21:92:1626:1118:7:6:9::::84 pos.-specific C ::3221:21::::::1918:7:::::16:4 probability G 297176:669482a92::1:3:a1a9:11: matrix T :1:4:31:3:::2::6:113:4:::19311 bits 2.2 2.0 1.8 * * *** * 1.6 * * *** * Relative 1.3 ** * * ** * * ****** Entropy 1.1 ** * *** ** ** * ****** * (33.2 bits) 0.9 *** * *** ** *********** * 0.7 *** *** ******* ************** 0.4 *** ************************** 0.2 ****************************** 0.0 ------------------------------ Multilevel AGGTGGAGGGAGAGGTCACACAGAGGTCAA consensus G CACT AT GAG G TGT T C sequence C C T -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AGSHGKAGKGRGAGGTCACWSWGAGGTYAM MEME-8 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ------------------------------ chr16:1651582-1652082 + 4 3.45e-16 GAG AGGTGGACTGAGAGGTCACACAGAGGTCAC AGAAAGGTGG chr16:1651042-1651542 + 68 3.53e-14 GGTTATGGAG AGGTCGACTGAGAGGTCACACAGAGGTCAT CTA chr5:352361-352861 + 44 1.05e-13 TAAATGGGTC AGCTGTAGGGGATGGTCACTCTGAGGTTAA ATAGGTCAGC chr5:352560-353060 + 30 5.07e-13 TAAATGGGTC AGCCGTAGGGGATGGTCACTCTGAGGTTAA ATGGGTCAGC chr11:64259391-64259891 - 61 1.05e-10 AGTCAGAGCC ATGTCTAAGGAGGGGGCATAGTGAGGTGAA CAGTCAGGGG chr9:92877513-92878013 - 10 1.67e-10 GTGGATCTGA GGGAGGAGTGAGGGGGCACTGAGGGGTCTC TGGTGGTGG chr6:24402923-24403423 - 8 2.60e-10 GGCGGCCGCA GGCAGCAACGGGAGGACCCACAGAGGTCAC GTCCAAG chr4:139555179-139555679 + 28 4.70e-10 CCAAGCAGGA AGGGGGAGGGGGAGGCCTGACTGAGTTCGC TCGGGGGCAG chr1:154353400-154353900 - 2 7.69e-10 GCCAGATTAC AGGCAGTGGAAGAGATAACAGAGAGGCTAA T -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AGSHGKAGKGRGAGGTCACWSWGAGGTYAM MEME-8 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr16:1651582-1652082 3.4e-16 3_[+8]_67 chr16:1651042-1651542 3.5e-14 67_[+8]_3 chr5:352361-352861 1e-13 43_[+8]_27 chr5:352560-353060 5.1e-13 29_[+8]_41 chr11:64259391-64259891 1e-10 60_[-8]_10 chr9:92877513-92878013 1.7e-10 9_[-8]_61 chr6:24402923-24403423 2.6e-10 7_[-8]_63 chr4:139555179-139555679 4.7e-10 27_[+8]_43 chr1:154353400-154353900 7.7e-10 1_[-8]_69 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AGSHGKAGKGRGAGGTCACWSWGAGGTYAM MEME-8 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF AGSHGKAGKGRGAGGTCACWSWGAGGTYAM width=30 seqs=9 chr16:1651582-1652082 ( 4) AGGTGGACTGAGAGGTCACACAGAGGTCAC 1 chr16:1651042-1651542 ( 68) AGGTCGACTGAGAGGTCACACAGAGGTCAT 1 chr5:352361-352861 ( 44) AGCTGTAGGGGATGGTCACTCTGAGGTTAA 1 chr5:352560-353060 ( 30) AGCCGTAGGGGATGGTCACTCTGAGGTTAA 1 chr11:64259391-64259891 ( 61) ATGTCTAAGGAGGGGGCATAGTGAGGTGAA 1 chr9:92877513-92878013 ( 10) GGGAGGAGTGAGGGGGCACTGAGGGGTCTC 1 chr6:24402923-24403423 ( 8) GGCAGCAACGGGAGGACCCACAGAGGTCAC 1 chr4:139555179-139555679 ( 28) AGGGGGAGGGGGAGGCCTGACTGAGTTCGC 1 chr1:154353400-154353900 ( 2) AGGCAGTGGAAGAGATAACAGAGAGGCTAA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AGSHGKAGKGRGAGGTCACWSWGAGGTYAM MEME-8 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 30 n= 42600 bayes= 12.3427 E= 1.2e-002 188 -982 -38 -982 -982 -982 162 -93 -982 21 121 -982 7 -38 -137 107 -93 -38 121 -982 -982 -137 95 65 207 -982 -982 -93 7 -38 95 -982 -982 -137 95 65 -93 -982 162 -982 139 -982 62 -982 7 -982 143 -982 139 -982 -38 7 -982 -982 179 -982 -93 -982 162 -982 -93 -137 -38 139 -93 162 -982 -982 188 -137 -982 -93 -982 143 -137 -93 165 -982 -982 65 -982 121 21 -982 139 -982 -982 107 -982 -982 179 -982 207 -982 -137 -982 -982 -982 179 -982 -982 -982 162 -93 -982 -137 -982 207 -982 95 -137 65 188 -982 -137 -93 107 62 -982 -93 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AGSHGKAGKGRGAGGTCACWSWGAGGTYAM MEME-8 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 30 nsites= 9 E= 1.2e-002 0.777778 0.000000 0.222222 0.000000 0.000000 0.000000 0.888889 0.111111 0.000000 0.333333 0.666667 0.000000 0.222222 0.222222 0.111111 0.444444 0.111111 0.222222 0.666667 0.000000 0.000000 0.111111 0.555556 0.333333 0.888889 0.000000 0.000000 0.111111 0.222222 0.222222 0.555556 0.000000 0.000000 0.111111 0.555556 0.333333 0.111111 0.000000 0.888889 0.000000 0.555556 0.000000 0.444444 0.000000 0.222222 0.000000 0.777778 0.000000 0.555556 0.000000 0.222222 0.222222 0.000000 0.000000 1.000000 0.000000 0.111111 0.000000 0.888889 0.000000 0.111111 0.111111 0.222222 0.555556 0.111111 0.888889 0.000000 0.000000 0.777778 0.111111 0.000000 0.111111 0.000000 0.777778 0.111111 0.111111 0.666667 0.000000 0.000000 0.333333 0.000000 0.666667 0.333333 0.000000 0.555556 0.000000 0.000000 0.444444 0.000000 0.000000 1.000000 0.000000 0.888889 0.000000 0.111111 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.888889 0.111111 0.000000 0.111111 0.000000 0.888889 0.000000 0.555556 0.111111 0.333333 0.777778 0.000000 0.111111 0.111111 0.444444 0.444444 0.000000 0.111111 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AGSHGKAGKGRGAGGTCACWSWGAGGTYAM MEME-8 regular expression -------------------------------------------------------------------------------- [AG]G[GC][TAC][GC][GT]A[GAC][GT]G[AG][GA][AGT]GG[TG]CAC[AT][CG][AT]GAGGT[CT]A[AC] -------------------------------------------------------------------------------- Time 2334.40 secs. ******************************************************************************** ******************************************************************************** MOTIF ATGTTGGCCAGGCTGGTCTCGA MEME-9 width = 22 sites = 4 llr = 111 E-value = 5.4e+000 ******************************************************************************** -------------------------------------------------------------------------------- Motif ATGTTGGCCAGGCTGGTCTCGA MEME-9 Description -------------------------------------------------------------------------------- Simplified A a::::3:::a::3::::::::a pos.-specific C :::::::8a:::8::::a:8:: probability G ::8::8a:::aa::aa::::a: matrix T :a3aa::3:::::a::a:a3:: bits 2.2 ** ** * * * * * 2.0 ** ** * * * * * 1.8 ** ** * **** ****** ** 1.6 ** ** * **** ****** ** Relative 1.3 ** ** * **** ****** ** Entropy 1.1 ********************** (40.0 bits) 0.9 ********************** 0.7 ********************** 0.4 ********************** 0.2 ********************** 0.0 ---------------------- Multilevel ATGTTGGCCAGGCTGGTCTCGA consensus T A T A T sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ATGTTGGCCAGGCTGGTCTCGA MEME-9 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ---------------------- chr6:27602210-27602710 + 25 8.11e-14 gggtttcgcc atgttggccaggctggtctcga actcctgacc chr19:55399166-55399666 + 1 3.80e-13 . atgttggccaggctggtcttga actcctgacc chr2:28894089-28894589 + 35 3.80e-13 gggtttctac atgttggtcaggctggtctcga actccgacct chr5:181218359-181218859 - 65 1.14e-12 GGGTTTCACC ATTTTAGCCAGGATGGTCTCGA TCTCCTGACC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ATGTTGGCCAGGCTGGTCTCGA MEME-9 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr6:27602210-27602710 8.1e-14 24_[+9]_54 chr19:55399166-55399666 3.8e-13 [+9]_78 chr2:28894089-28894589 3.8e-13 34_[+9]_44 chr5:181218359-181218859 1.1e-12 64_[-9]_14 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ATGTTGGCCAGGCTGGTCTCGA MEME-9 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF ATGTTGGCCAGGCTGGTCTCGA width=22 seqs=4 chr6:27602210-27602710 ( 25) ATGTTGGCCAGGCTGGTCTCGA 1 chr19:55399166-55399666 ( 1) ATGTTGGCCAGGCTGGTCTTGA 1 chr2:28894089-28894589 ( 35) ATGTTGGTCAGGCTGGTCTCGA 1 chr5:181218359-181218859 ( 65) ATTTTAGCCAGGATGGTCTCGA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ATGTTGGCCAGGCTGGTCTCGA MEME-9 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 22 n= 47400 bayes= 13.5325 E= 5.4e+000 224 -865 -865 -865 -865 -865 -865 224 -865 -865 138 24 -865 -865 -865 224 -865 -865 -865 224 24 -865 138 -865 -865 -865 179 -865 -865 138 -865 24 -865 179 -865 -865 224 -865 -865 -865 -865 -865 179 -865 -865 -865 179 -865 24 138 -865 -865 -865 -865 -865 224 -865 -865 179 -865 -865 -865 179 -865 -865 -865 -865 224 -865 179 -865 -865 -865 -865 -865 224 -865 138 -865 24 -865 -865 179 -865 224 -865 -865 -865 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ATGTTGGCCAGGCTGGTCTCGA MEME-9 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 22 nsites= 4 E= 5.4e+000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.750000 0.250000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.250000 0.000000 0.750000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.750000 0.000000 0.250000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.250000 0.750000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.750000 0.000000 0.250000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ATGTTGGCCAGGCTGGTCTCGA MEME-9 regular expression -------------------------------------------------------------------------------- AT[GT]TT[GA]G[CT]CAGG[CA]TGGTCT[CT]GA -------------------------------------------------------------------------------- Time 2599.41 secs. ******************************************************************************** ******************************************************************************** MOTIF GGSCGGGSGCGGBSGCKCMSGC MEME-10 width = 22 sites = 22 llr = 305 E-value = 1.1e+001 ******************************************************************************** -------------------------------------------------------------------------------- Motif GGSCGGGSGCGGBSGCKCMSGC MEME-10 Description -------------------------------------------------------------------------------- Simplified A :::::::1:1::::::::5::: pos.-specific C :15923:5373334:a:634:a probability G 973:87a3717746a:43168: matrix T 1211:::1:1::3:::611:1: bits 2.2 2.0 1.8 * 1.6 * ** * Relative 1.3 * * ** * Entropy 1.1 * ** * *** ** (20.0 bits) 0.9 * **** * * *** *** 0.7 ** **** **** **** *** 0.4 ******* **** ********* 0.2 ********************** 0.0 ---------------------- Multilevel GGCCGGGCGCGGGGGCTCAGGC consensus G C GC CCCC GGCC sequence T -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGSCGGGSGCGGBSGCKCMSGC MEME-10 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ---------------------- chr10:68527495-68527995 + 38 3.10e-12 CCCACAACCT ggccgggcgcggtggctcacgc ctgtaatccc chr4:123508544-123509044 - 68 2.21e-10 TCTGGAGTTT TGCCGGGCGCGGTGGCTCACGC CTGTAATCCC chr6:31795909-31796409 + 70 1.37e-09 aaagggTGAC ggccgggcgcagtggctcacgc ctataatcc chr17:73310580-73311080 - 47 6.05e-09 CTGGAGAGCT GGGCGGGAGCCGGGGCTGAGGC TGAGCCAGCT chr3:17742304-17742804 - 72 9.06e-09 CAGGTCG GGCCGGGCCCGGCCGCTTCCGC GAGCGCCCTG chr6:28757387-28757887 - 71 1.33e-08 ACACTGAG GTCCGGGCGCGGTGGCTCACGT CTGTAATCCC chr19:36139809-36140309 - 53 2.74e-08 CGGCTCCGGA GGGCGGGGCCGGTGACTCAGGC CGCAACTCTC chr19:17334556-17335056 + 19 4.78e-08 AGGAGACAAA GGCCGCGCCCGCCCGCGCCGGC CTCGGTCCTC chr19:55399166-55399666 - 79 1.73e-07 . GGTTGGGTGGGGTGGCTCACGC CTGTAATCCT chr19:58519430-58519930 - 60 1.90e-07 CCCTGCCGCA GGGCGGGCGAGGAGGCTGGGGC GTGCCAGGGG chr3:14947397-14947897 + 9 2.08e-07 TCCTACCA GCGCGCGggcggcggcggcggc ggcACCGGGG chr19:33797048-33797548 + 34 2.70e-07 gtgtgtgtgt gtgcgcgcgcgcgcgcgcgcgc TTGTGGAGGT chr19:29873183-29873683 + 52 4.43e-07 CGGGGTCGAT GGCTGGGGGACCCGGCTCCGGC CCAAGCCAAT chr6:79078062-79078562 - 79 5.60e-07 . GCCGGGGGGCGGGGGCGCGGGC CAGAGCCGGG chr19:15125301-15125801 - 62 5.60e-07 GACCCAGCCT GGCCCGGGGTCGGGGATCAGGC TCGGGCCCGT chr19:35269672-35270172 + 76 6.04e-07 GCAGCCCAGC GCCCGGGCCCCGCCGCTGCCTC TGT chr13:99200876-99201376 - 65 7.55e-07 GGTGGGGTCG GGGCGGGCGGCGGGGCTTTGTC CCCATTCGCC chr1:228458414-228458914 - 66 1.00e-06 TTCTCGTTCT GTGCCGGCGCGCGCGCGCACAC ACACACACAC chr19:11089931-11090431 - 4 1.41e-06 TAGAAGAGAG GGTCCCGGCCGGGCGCGGTGGC TGA chr7:149624687-149625187 + 46 1.60e-06 CTTCCCCGAC TGCCGCGTGTGCGCGCGCAGTC ACTGCGCTGG chr12:12266975-12267475 + 76 1.71e-06 GCGGGATTCT TTCCCGGACCGGCCGCTTCGGC CCT chr2:85538557-85539057 - 11 2.94e-06 CTTTCCCGGA GGTCGCGTCCCCCAGCGGAGGC GGCGGGAATC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGSCGGGSGCGGBSGCKCMSGC MEME-10 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr10:68527495-68527995 3.1e-12 37_[+10]_41 chr4:123508544-123509044 2.2e-10 67_[-10]_11 chr6:31795909-31796409 1.4e-09 69_[+10]_9 chr17:73310580-73311080 6e-09 46_[-10]_32 chr3:17742304-17742804 9.1e-09 71_[-10]_7 chr6:28757387-28757887 1.3e-08 70_[-10]_8 chr19:36139809-36140309 2.7e-08 52_[-10]_26 chr19:17334556-17335056 4.8e-08 18_[+10]_60 chr19:55399166-55399666 1.7e-07 78_[-10] chr19:58519430-58519930 1.9e-07 59_[-10]_19 chr3:14947397-14947897 2.1e-07 8_[+10]_70 chr19:33797048-33797548 2.7e-07 33_[+10]_45 chr19:29873183-29873683 4.4e-07 51_[+10]_27 chr6:79078062-79078562 5.6e-07 78_[-10] chr19:15125301-15125801 5.6e-07 61_[-10]_17 chr19:35269672-35270172 6e-07 75_[+10]_3 chr13:99200876-99201376 7.6e-07 64_[-10]_14 chr1:228458414-228458914 1e-06 65_[-10]_13 chr19:11089931-11090431 1.4e-06 3_[-10]_75 chr7:149624687-149625187 1.6e-06 45_[+10]_33 chr12:12266975-12267475 1.7e-06 75_[+10]_3 chr2:85538557-85539057 2.9e-06 10_[-10]_68 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGSCGGGSGCGGBSGCKCMSGC MEME-10 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF GGSCGGGSGCGGBSGCKCMSGC width=22 seqs=22 chr10:68527495-68527995 ( 38) GGCCGGGCGCGGTGGCTCACGC 1 chr4:123508544-123509044 ( 68) TGCCGGGCGCGGTGGCTCACGC 1 chr6:31795909-31796409 ( 70) GGCCGGGCGCAGTGGCTCACGC 1 chr17:73310580-73311080 ( 47) GGGCGGGAGCCGGGGCTGAGGC 1 chr3:17742304-17742804 ( 72) GGCCGGGCCCGGCCGCTTCCGC 1 chr6:28757387-28757887 ( 71) GTCCGGGCGCGGTGGCTCACGT 1 chr19:36139809-36140309 ( 53) GGGCGGGGCCGGTGACTCAGGC 1 chr19:17334556-17335056 ( 19) GGCCGCGCCCGCCCGCGCCGGC 1 chr19:55399166-55399666 ( 79) GGTTGGGTGGGGTGGCTCACGC 1 chr19:58519430-58519930 ( 60) GGGCGGGCGAGGAGGCTGGGGC 1 chr3:14947397-14947897 ( 9) GCGCGCGGGCGGCGGCGGCGGC 1 chr19:33797048-33797548 ( 34) GTGCGCGCGCGCGCGCGCGCGC 1 chr19:29873183-29873683 ( 52) GGCTGGGGGACCCGGCTCCGGC 1 chr6:79078062-79078562 ( 79) GCCGGGGGGCGGGGGCGCGGGC 1 chr19:15125301-15125801 ( 62) GGCCCGGGGTCGGGGATCAGGC 1 chr19:35269672-35270172 ( 76) GCCCGGGCCCCGCCGCTGCCTC 1 chr13:99200876-99201376 ( 65) GGGCGGGCGGCGGGGCTTTGTC 1 chr1:228458414-228458914 ( 66) GTGCCGGCGCGCGCGCGCACAC 1 chr19:11089931-11090431 ( 4) GGTCCCGGCCGGGCGCGGTGGC 1 chr7:149624687-149625187 ( 46) TGCCGCGTGTGCGCGCGCAGTC 1 chr12:12266975-12267475 ( 76) TTCCCGGACCGGCCGCTTCGGC 1 chr2:85538557-85539057 ( 11) GGTCGCGTCCCCCAGCGGAGGC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGSCGGGSGCGGBSGCKCMSGC MEME-10 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 22 n= 47400 bayes= 12.6064 E= 1.1e+001 -1110 -1110 158 -63 -1110 -108 124 -22 -1110 92 14 -63 -1110 158 -266 -122 -1110 -66 150 -1110 -1110 -8 133 -1110 -1110 -1110 179 -1110 -122 79 -8 -63 -1110 14 124 -1110 -122 133 -166 -122 -222 -8 124 -1110 -1110 -8 133 -1110 -222 14 33 37 -222 33 104 -1110 -222 -1110 173 -1110 -222 173 -1110 -1110 -1110 -1110 33 159 -1110 104 -8 -63 124 -8 -108 -122 -1110 50 104 -1110 -222 -1110 150 -63 -1110 173 -1110 -222 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGSCGGGSGCGGBSGCKCMSGC MEME-10 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 22 nsites= 22 E= 1.1e+001 0.000000 0.000000 0.863636 0.136364 0.000000 0.136364 0.681818 0.181818 0.000000 0.545455 0.318182 0.136364 0.000000 0.863636 0.045455 0.090909 0.000000 0.181818 0.818182 0.000000 0.000000 0.272727 0.727273 0.000000 0.000000 0.000000 1.000000 0.000000 0.090909 0.500000 0.272727 0.136364 0.000000 0.318182 0.681818 0.000000 0.090909 0.727273 0.090909 0.090909 0.045455 0.272727 0.681818 0.000000 0.000000 0.272727 0.727273 0.000000 0.045455 0.318182 0.363636 0.272727 0.045455 0.363636 0.590909 0.000000 0.045455 0.000000 0.954545 0.000000 0.045455 0.954545 0.000000 0.000000 0.000000 0.000000 0.363636 0.636364 0.000000 0.590909 0.272727 0.136364 0.500000 0.272727 0.136364 0.090909 0.000000 0.409091 0.590909 0.000000 0.045455 0.000000 0.818182 0.136364 0.000000 0.954545 0.000000 0.045455 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGSCGGGSGCGGBSGCKCMSGC MEME-10 regular expression -------------------------------------------------------------------------------- GG[CG]CG[GC]G[CG][GC]C[GC][GC][GCT][GC]GC[TG][CG][AC][GC]GC -------------------------------------------------------------------------------- Time 2858.40 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr19:37594312-37594812 6.23e-01 100 chr3:194350309-194350809 2.54e-02 23_[+5(1.35e-05)]_46 chr6:31829615-31830115 3.45e-04 22_[-7(8.36e-05)]_27_[+2(1.20e-06)]_\ 13 chr19:19634170-19634670 1.95e-10 6_[-7(5.89e-07)]_12_[+1(1.92e-11)]_\ 36 chr19:38336536-38337036 1.19e-02 57_[+1(6.70e-05)]_13 chr6:28757387-28757887 8.63e-16 15_[-4(4.24e-05)]_11_[+3(2.99e-19)]_\ [-10(1.33e-08)]_8 chr15:96694040-96694540 2.46e-01 100 chr10:74833322-74833822 7.70e-02 32_[-5(2.48e-06)]_4_[+5(2.06e-05)]_\ 2 chr1:1307132-1307632 9.64e-03 59_[+1(8.84e-06)]_11 chr15:84981108-84981608 1.79e-01 18_[+4(8.67e-05)]_71 chr15:57306503-57307003 3.63e-03 61_[-1(1.09e-06)]_9 chr19:17334556-17335056 3.98e-03 18_[+10(4.78e-08)]_60 chr22:50625933-50626433 3.24e-01 100 chr2:19670200-19670700 5.12e-03 63_[+5(7.71e-07)]_6 chr19:13846933-13847433 3.26e-04 26_[+7(5.27e-06)]_58 chr6:27132145-27132645 9.33e-01 100 chr17:43671132-43671632 2.52e-02 59_[+5(1.19e-06)]_10 chr19:30426000-30426500 1.07e-01 24_[+5(9.61e-07)]_45 chr5:27510984-27511484 2.80e-02 3_[-5(1.48e-06)]_7_[-5(7.68e-08)]_\ 28 chr17:51165801-51166301 1.75e-01 100 chr10:119892566-11989306 3.34e-01 100 chr17:4967203-4967703 1.19e-01 66_[-3(3.46e-05)]_1 chr1:167658524-167659024 4.61e-04 10_[-5(4.95e-06)]_32_[+2(6.43e-08)]_\ 5 chr19:11089931-11090431 2.16e-02 3_[-10(1.41e-06)]_75 chr17:48252524-48253024 1.76e-03 13_[+2(2.07e-10)]_65 chr21:43857383-43857883 9.95e-18 6_[-2(1.40e-07)]_25_[-3(9.15e-19)]_\ 14 chr19:42179078-42179578 1.92e-03 54_[+6(1.08e-05)]_24 chr19:38850774-38851274 1.19e-01 100 chr6:4320897-4321397 5.03e-03 27_[-5(8.72e-05)]_9_[+2(1.17e-05)]_\ 11 chr10:16686026-16686526 4.11e-03 6_[-5(5.44e-06)]_9_[-5(2.40e-07)]_\ 23 chr9:136546129-136546629 2.58e-01 100 chr16:675002-675502 3.26e-02 100 chr17:78186817-78187317 9.05e-01 100 chr15:66701030-66701530 7.36e-01 100 chr1:3900201-3900701 8.12e-01 100 chr19:33177149-33177649 8.20e-01 100 chr6:157147224-157147724 6.09e-06 1_[-4(1.78e-06)]_21_[-4(5.96e-06)]_\ 14_[-1(2.49e-07)]_12 chr19:17309611-17310111 4.24e-07 36_[-1(4.11e-08)]_34 chr5:14147092-14147592 7.57e-02 55_[-8(6.36e-05)]_15 chr17:8294738-8295238 4.15e-02 9_[+1(2.59e-06)]_61 chr19:40612257-40612757 9.60e-06 3_[+7(3.15e-06)]_15_[-1(4.30e-07)]_\ [-5(1.35e-05)]_5 chr13:75482302-75482802 9.17e-03 48_[-1(1.04e-05)]_22 chr22:30695033-30695533 6.14e-01 100 chr19:38851599-38852099 6.30e-02 100 chr19:48960908-48961408 9.51e-09 14_[-1(2.78e-08)]_56 chr7:21476368-21476868 5.30e-04 7_[+5(2.13e-07)]_28_[+5(8.13e-05)]_\ 3 chr9:133417912-133418412 5.88e-01 100 chr6:115485218-115485718 2.42e-02 32_[+2(3.35e-05)]_46 chr1:164223311-164223811 2.10e-03 1_[-2(2.57e-07)]_33_[-5(2.24e-06)]_\ 13 chr17:79991986-79992486 3.07e-04 25_[-1(1.61e-06)]_45 chr13:114281131-11428163 3.66e-01 61_[-10(9.13e-05)]_17 chr19:40602077-40602577 1.30e-02 64_[+6(4.11e-05)]_14 chr6:70270266-70270766 1.42e-02 3_[+3(6.00e-05)]_24_[-5(4.50e-06)]_\ 9 chr3:42819877-42820377 4.76e-02 30_[-5(4.36e-07)]_39 chr19:32972112-32972612 6.14e-01 100 chrX:136057546-136058046 4.03e-02 41_[+5(5.44e-06)]_28 chr19:35740234-35740734 1.00e+00 100 chr17:47970976-47971476 3.76e-02 11_[-1(3.73e-06)]_59 chr19:45642955-45643455 3.00e-03 100 chr17:44503316-44503816 3.11e-02 40_[-1(4.08e-06)]_30 chr19:47112637-47113137 4.59e-02 55_[+2(1.17e-05)]_23 chr1:87718277-87718777 7.33e-04 49_[-5(8.76e-08)]_20 chr1:81032929-81033429 3.91e-01 100 chr5:14439273-14439773 1.58e-01 33_[+5(8.13e-05)]_36 chr11:64259594-64260094 5.43e-05 21_[-1(1.41e-08)]_5_[-1(3.09e-05)]_\ 14 chr22:37803111-37803611 1.06e-02 46_[-4(3.58e-05)]_43 chr14:22982590-22983090 4.96e-03 34_[+1(1.33e-05)]_36 chr1:32179546-32180046 2.73e-02 71_[+9(2.04e-05)]_7 chr17:74514009-74514509 9.57e-02 100 chr16:25257989-25258489 5.73e-02 100 chr12:93570671-93571171 5.96e-01 100 chr17:48577450-48577950 1.24e-01 40_[+2(4.42e-05)]_38 chr1:201955041-201955541 6.54e-01 100 chr1:155000893-155001393 2.72e-04 33_[+6(8.16e-11)]_45 chr1:46132482-46132982 8.02e-01 100 chr17:37609128-37609628 3.31e-02 100 chr16:14326045-14326545 4.82e-02 28_[+5(7.71e-07)]_41 chr19:38457175-38457675 2.88e-01 100 chrX:12228860-12229360 6.94e-02 5_[+5(1.60e-05)]_23_[+5(4.21e-05)]_\ 10 chr19:34184879-34185379 7.19e-02 55_[+5(4.08e-06)]_14 chr12:98503529-98504029 3.73e-02 100 chr1:9943139-9943639 7.16e-01 100 chr19:5692088-5692588 7.02e-01 100 chr17:81711651-81712151 7.94e-03 24_[+1(2.36e-06)]_46 chr3:100400774-100401274 8.81e-02 43_[+6(1.12e-05)]_35 chr22:40711473-40711973 2.12e-02 1_[-2(1.17e-05)]_77 chr17:73310580-73311080 1.33e-05 [-2(6.37e-07)]_24_[-10(6.05e-09)]_\ 32 chr9:137516842-137517342 2.67e-05 19_[-6(7.60e-08)]_12_[-6(1.10e-08)]_\ 25 chr4:139555179-139555679 1.05e-04 27_[+8(4.70e-10)]_43 chr21:43810245-43810745 4.93e-04 15_[-1(4.45e-06)]_2_[-1(4.86e-06)]_\ 23 chr9:137221523-137222023 1.09e-02 46_[-1(2.36e-06)]_24 chr14:105163392-10516389 1.62e-01 72_[-4(2.42e-05)]_17 chr8:120266338-120266838 1.96e-01 100 chr2:241881320-241881820 3.25e-04 74_[+2(2.57e-10)]_4 chr5:180810429-180810929 5.23e-01 100 chr3:198173490-198173990 3.63e-11 4_[-7(5.49e-09)]_1_[+4(8.83e-06)]_\ 10_[+1(5.93e-09)]_28 chr6:33677706-33678206 9.32e-05 19_[-1(3.11e-07)]_51 chr1:43604154-43604654 1.12e-02 31_[-4(8.83e-06)]_21_[-4(3.58e-05)]_\ 26 chr1:186375315-186375815 4.16e-01 100 chr19:55599212-55599712 3.91e-01 100 chr5:76585788-76586288 1.39e-03 36_[-5(1.94e-08)]_33 chr19:48596174-48596674 1.46e-06 23_[-4(1.48e-05)]_20_[-1(4.67e-08)]_\ 16 chr6:24402923-24403423 6.83e-04 7_[-8(2.60e-10)]_63 chr16:30634210-30634710 9.77e-01 100 chr4:80307271-80307771 2.42e-02 24_[-5(8.64e-06)]_45 chr1:44775090-44775590 1.13e-01 100 chr15:67792429-67792929 1.37e-04 57_[+5(5.89e-08)]_12 chr9:92877513-92878013 5.53e-06 9_[-8(1.67e-10)]_61 chr19:45348999-45349499 3.31e-05 2_[-4(9.24e-05)]_26_[-1(4.30e-07)]_\ 31 chr15:65792225-65792725 4.36e-01 100 chr19:15125301-15125801 1.82e-04 61_[-10(5.60e-07)]_17 chr1:52697889-52698389 4.75e-02 14_[-10(6.88e-05)]_64 chr16:2474564-2475064 1.06e-01 7_[-1(7.66e-05)]_63 chr14:102316755-10231725 4.61e-02 8_[+4(5.05e-05)]_81 chr19:50658457-50658957 1.83e-01 100 chr3:16482928-16483428 1.66e-01 16_[-5(9.46e-06)]_53 chr5:10601247-10601747 3.34e-01 100 chr1:228109390-228109890 6.07e-02 [+1(6.26e-05)]_70 chr12:31073819-31074319 4.41e-01 100 chr19:5903983-5904483 3.14e-02 58_[+1(8.84e-06)]_12 chr19:54209377-54209877 5.72e-01 100 chr18:49487103-49487603 9.87e-01 100 chr19:1068086-1068586 3.64e-03 3_[-4(2.42e-05)]_3_[+4(8.83e-06)]_\ 42_[-10(7.10e-05)]_8 chr2:152718072-152718572 6.25e-01 100 chr6:43454638-43455138 4.03e-01 100 chr11:118997931-11899843 1.44e-01 [+4(1.16e-05)]_89 chr4:143857512-143858012 3.30e-01 15_[-5(1.74e-05)]_18_[+5(6.57e-05)]_\ 5 chr8:99323753-99324253 4.84e-01 100 chr1:16122787-16123287 5.28e-02 6_[-5(7.58e-05)]_63 chr6:33170994-33171494 5.71e-08 25_[+1(2.49e-07)]_14_[-1(9.34e-05)]_\ 1 chr10:75235287-75235787 5.87e-02 100 chr1:228458414-228458914 1.68e-05 41_[+2(2.57e-10)]_2_[-10(1.00e-06)]_\ 13 chr19:37210019-37210519 1.02e-02 9_[-1(2.84e-06)]_4_[-1(5.85e-05)]_\ 27 chr17:47841019-47841519 2.09e-01 100 chr16:30094602-30095102 9.32e-01 100 chr16:1911602-1912102 3.94e-01 100 chr5:126000491-126000991 2.36e-02 26_[-5(3.44e-07)]_43 chr6:79078062-79078562 1.80e-02 78_[-10(5.60e-07)] chr5:125550184-125550684 9.98e-06 33_[+5(3.04e-06)]_6_[+2(2.57e-10)]_\ 8 chr10:133373037-13337353 3.22e-01 100 chr1:228781106-228781606 7.81e-01 100 chr19:11482470-11482970 7.89e-01 100 chr12:104064154-10406465 2.96e-01 100 chr11:63974539-63975039 2.14e-01 100 chr11:65472114-65472614 9.72e-04 35_[-2(1.33e-06)]_43 chr19:56121152-56121652 1.75e-01 100 chr18:23684579-23685079 5.25e-03 7_[+5(6.56e-06)]_62 chr5:40755806-40756306 6.98e-01 12_[-10(8.57e-05)]_66 chr8:109611203-109611703 1.19e-03 32_[-2(9.77e-07)]_2_[+5(3.88e-07)]_\ 13 chr5:59649183-59649683 9.77e-03 49_[+5(1.29e-07)]_20 chr1:160260950-160261450 3.14e-01 100 chr17:45320841-45321341 6.69e-01 100 chr2:238881199-238881699 2.00e-04 13_[+2(3.24e-07)]_24_[+2(1.58e-07)]_\ 19 chr1:155001610-155002110 2.40e-01 100 chr19:40831776-40832276 9.87e-02 100 chr7:100478119-100478619 1.20e-10 4_[+6(4.40e-14)]_5_[+2(2.57e-10)]_\ [+2(2.57e-10)]_25 chr5:36928876-36929376 3.74e-01 100 chr1:16644559-16645059 8.18e-01 100 chr19:2432433-2432933 2.53e-04 30_[-1(1.82e-05)]_8_[-1(4.45e-06)]_\ 2 chr7:148330329-148330829 9.25e-01 100 chr1:156660094-156660594 3.44e-01 100 chr13:99980704-99981204 1.73e-01 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54_[+4(2.39e-06)]_[+1(2.49e-07)]_5 chr1:220527708-220528208 6.53e-04 15_[-2(4.91e-08)]_63 chr13:78618329-78618829 9.63e-06 52_[-2(7.10e-07)]_26 chr14:32134485-32134985 1.39e-03 13_[-5(1.88e-07)]_17_[+2(5.49e-06)]_\ 17 chr12:49060565-49061065 8.96e-01 100 chr14:49586533-49587033 6.61e-01 100 chr19:44903610-44904110 1.98e-01 100 chr22:19432299-19432799 3.50e-01 100 chr1:151165313-151165813 9.09e-08 15_[-1(1.62e-08)]_55 chrX:12240420-12240920 4.51e-04 25_[+2(2.80e-08)]_4_[+5(2.24e-06)]_\ 18 chr6:31795909-31796409 1.38e-03 69_[+10(1.37e-09)]_9 chr9:85743152-85743652 3.09e-02 20_[-5(7.20e-06)]_49 chr3:198173990-198174490 2.21e-09 1_[+4(8.83e-06)]_10_[+1(3.81e-11)]_\ 4_[+1(1.61e-06)]_14 chr10:68527495-68527995 1.18e-17 37_[+10(3.10e-12)]_[-3(3.35e-19)]_8 chr22:41832502-41833002 4.83e-01 100 chr5:139517820-139518320 6.02e-01 100 chr9:136848076-136848576 3.63e-01 72_[+10(9.13e-05)]_6 chr15:96053075-96053575 4.63e-03 51_[-2(6.37e-07)]_27 chr3:57555824-57556324 3.59e-01 100 chr1:228377873-228378373 3.98e-01 100 chr4:123508544-123509044 4.91e-15 34_[+3(1.03e-17)]_[-10(2.21e-10)]_\ 11 chr19:36604639-36605139 6.46e-01 100 chr19:48444277-48444777 2.63e-08 14_[+7(2.97e-07)]_12_[-1(8.92e-07)]_\ 28 chr12:54033438-54033938 3.00e-01 100 chr11:67630626-67631126 5.37e-02 12_[-4(8.83e-06)]_77 chr19:38831451-38831951 7.50e-01 100 chr19:56148901-56149401 1.01e-05 7_[-1(9.82e-08)]_6_[-1(3.11e-07)]_\ 13_[-4(1.66e-05)]_3 chr1:80403331-80403831 2.06e-03 65_[+5(3.04e-06)]_4 chr1:2146902-2147402 1.87e-04 6_[-4(1.11e-06)]_20_[-4(1.11e-06)]_\ 20_[-4(1.11e-06)]_21 chr19:14030998-14031498 3.66e-05 7_[-4(4.51e-07)]_82 chr7:105012503-105013003 9.38e-02 100 chr18:12520335-12520835 1.71e-05 12_[-2(4.28e-08)]_35_[-5(3.44e-07)] chr6:27472828-27473328 7.97e-01 100 chr1:86774458-86774958 1.19e-01 100 chr6:90677337-90677837 6.64e-02 11_[-2(1.37e-05)]_67 chr21:43776506-43777006 1.75e-07 24_[+1(8.67e-10)]_46 chr14:20343021-20343521 8.42e-02 100 chr1:226186516-226187016 4.10e-07 6_[-1(3.61e-08)]_64 chr19:12938030-12938530 1.52e-01 100 chr5:69521095-69521595 1.32e-02 47_[+2(1.08e-06)]_31 chr7:99504975-99505475 3.06e-01 100 chr1:215581851-215582351 9.71e-03 63_[+2(1.40e-07)]_15 chr19:34134439-34134939 5.76e-04 52_[-1(2.15e-06)]_18 chr17:60392093-60392593 8.95e-01 100 chr6:28141760-28142260 1.36e-01 100 chr19:40465431-40465931 5.18e-01 100 chr19:11435509-11436009 3.36e-01 100 chr17:4559078-4559578 1.43e-05 40_[+1(6.01e-08)]_30 chr16:1271711-1272211 1.00e+00 100 chr6:82072025-82072525 1.50e-02 26_[-2(8.42e-06)]_8_[-5(2.75e-06)]_\ 13 chr5:59303248-59303748 2.07e-02 36_[-5(1.29e-07)]_33 chr12:95073288-95073788 4.00e-05 37_[+2(2.28e-07)]_[+4(1.16e-05)]_30 chr5:181173637-181174137 4.45e-01 100 chr19:44886097-44886597 1.83e-04 21_[+4(1.66e-05)]_53_[+4(4.51e-07)]_\ 4 chr1:111449416-111449916 6.37e-02 24_[+6(8.27e-05)]_54 chr13:75903918-75904418 9.51e-02 9_[-5(1.89e-05)]_60 chr1:211258826-211259326 5.70e-01 100 chr17:314580-315080 2.73e-02 23_[-1(3.57e-05)]_[-1(7.17e-05)]_17 chr5:41903941-41904441 8.93e-02 100 chr17:4810844-4811344 1.15e-05 2_[-4(3.21e-06)]_21_[-1(4.45e-06)]_\ 36 chr1:220046432-220046932 6.81e-01 100 chr1:241848044-241848544 7.30e-01 100 chr12:1661866-1662366 8.24e-03 8_[-6(6.24e-05)]_9_[-6(8.59e-08)]_\ 39 chr22:37570329-37570829 1.63e-07 37_[-1(7.96e-09)]_33 chr1:11178239-11178739 7.76e-01 100 chr19:38374348-38374848 3.63e-01 100 chr6:2028574-2029074 1.53e-02 20_[-5(1.13e-05)]_4_[+5(4.21e-05)]_\ 14 chr13:46674978-46675478 6.21e-04 13_[+5(1.07e-06)]_12_[-2(1.33e-06)]_\ 22 chr15:74546036-74546536 3.88e-01 42_[-6(7.28e-05)]_36 chr19:44212402-44212902 2.30e-01 100 chr6:27602210-27602710 2.42e-08 24_[+9(8.11e-14)]_1_[-4(3.21e-06)]_\ 42 chr22:41446709-41447209 2.55e-01 100 chr10:22552789-22553289 2.77e-01 48_[+5(8.72e-05)]_21 chr19:40590361-40590861 2.01e-06 18_[-6(1.77e-08)]_2_[-1(6.70e-05)]_\ 3_[-4(8.25e-05)]_14 chr5:94469755-94470255 1.65e-01 45_[-5(7.06e-05)]_24 chr1:20507788-20508288 6.04e-01 100 chr21:28992711-28993211 2.41e-01 48_[-6(9.64e-05)]_30 chr8:37302587-37303087 1.14e-02 38_[-5(1.64e-06)]_31 chr8:144103777-144104277 1.29e-03 59_[+1(1.09e-06)]_11 chr1:75724559-75725059 5.88e-01 100 chr19:2818266-2818766 7.71e-03 8_[+4(2.13e-05)]_18_[+4(2.13e-05)]_\ 18_[+4(2.13e-05)]_23 chr19:55399166-55399666 4.72e-25 [+9(3.80e-13)]_1_[-4(3.21e-06)]_11_\ [+3(1.64e-18)]_[-10(1.73e-07)] chr11:120347010-12034751 1.55e-10 7_[-6(7.60e-10)]_6_[-6(2.12e-13)]_4_\ [+2(2.57e-10)]_17 chr17:81393839-81394339 6.95e-01 100 chr1:21345587-21346087 2.03e-01 100 chr19:13101601-13102101 7.69e-05 23_[-4(1.48e-05)]_15_[-1(7.28e-07)]_\ 21 chr13:37046878-37047378 9.73e-03 26_[-5(5.49e-07)]_43 chr11:72643043-72643543 2.98e-01 43_[-10(9.13e-05)]_35 chr1:232950436-232950936 1.12e-05 22_[+7(5.39e-05)]_1_[-1(2.49e-07)]_\ 31 chr12:12266975-12267475 2.42e-02 75_[+10(1.71e-06)]_3 chr15:40092249-40092749 1.60e-06 5_[-2(2.57e-10)]_6_[-10(6.47e-05)]_\ 45 chr7:100450351-100450851 1.66e-01 78_[+4(2.13e-05)]_11 chr19:1383509-1384009 1.56e-01 100 chr19:40090577-40091077 1.81e-02 14_[+7(4.01e-05)]_70 chr6:38974721-38975221 2.15e-01 [-2(3.12e-05)]_78 chrX:48597682-48598182 8.27e-01 100 chr17:63843010-63843510 1.83e-01 100 chr17:68011068-68011568 4.13e-01 100 chr1:244970802-244971302 3.26e-01 100 chr1:43389735-43390235 1.89e-02 52_[+1(1.56e-05)]_18 chr11:114400429-11440092 1.02e-01 100 chr19:1020424-1020924 5.05e-03 55_[+1(1.20e-06)]_15 chr8:37393065-37393565 2.52e-01 100 chr6:43321935-43322435 5.20e-04 32_[-2(2.10e-08)]_46 chr1:236281578-236282078 4.38e-02 3_[-4(5.05e-05)]_86 chr5:397752-398252 1.34e-01 23_[-1(1.04e-05)]_47 chr15:65610879-65611379 2.33e-01 100 chr6:27671973-27672473 5.50e-11 24_[+9(5.92e-10)]_1_[-4(4.51e-07)]_\ 42 chr1:2147756-2148256 8.38e-05 27_[-4(1.11e-06)]_24_[-4(1.11e-06)]_\ 27 chr5:173327963-173328463 5.52e-02 61_[-8(1.51e-05)]_9 chr19:44844628-44845128 3.37e-02 100 chr5:176448129-176448629 8.18e-02 100 chr1:151281372-151281872 1.56e-01 100 chrX:49053775-49054275 1.49e-03 18_[-4(1.83e-05)]_71 chr19:58182953-58183453 5.25e-01 100 chr17:6470610-6471110 2.46e-04 2_[+4(3.98e-05)]_8_[+1(1.33e-05)]_\ [+4(2.13e-05)]_8_[+1(5.79e-06)] chr21:17454350-17454850 9.97e-02 10_[+5(3.33e-05)]_59 chr19:8389643-8390143 9.09e-03 34_[+6(1.30e-07)]_44 chr19:49677045-49677545 4.96e-01 100 chr5:124734986-124735486 7.42e-01 100 chr19:41859711-41860211 5.80e-02 100 chr19:38518407-38518907 8.35e-19 2_[+4(2.39e-06)]_12_[+1(5.31e-06)]_\ 6_[-3(4.82e-19)]_6 chr8:37479253-37479753 3.73e-01 100 chr11:62771356-62771856 8.62e-08 45_[-1(5.30e-08)]_25 chr1:148522544-148523044 1.23e-03 52_[+2(5.03e-06)]_26 chr7:27165484-27165984 5.21e-01 46_[+2(3.12e-05)]_32 chr5:93582538-93583038 8.00e-04 33_[+2(3.91e-10)]_45 chr17:7836673-7837173 1.73e-03 47_[-1(5.32e-07)]_23 chr16:10743722-10744222 1.27e-01 100 chrX:156019633-156020133 1.54e-13 15_[+4(8.83e-06)]_2_[+4(2.13e-05)]_\ 1_[+4(2.13e-05)]_3_[+1(7.38e-13)]_[+4(2.13e-05)]_5 chr1:237864267-237864767 2.03e-01 22_[-4(3.98e-05)]_67 chr14:101761027-10176152 6.93e-04 68_[-6(1.62e-07)]_10 chr11:64259391-64259891 1.47e-12 29_[-1(2.35e-09)]_1_[-8(1.05e-10)]_\ 10 chr9:137023112-137023612 2.18e-01 100 chr17:39800990-39801490 5.09e-02 54_[-5(1.60e-05)]_15 chr8:25998500-25999000 1.38e-03 18_[+2(7.90e-07)]_5_[-5(1.19e-06)]_\ 24 chr22:24952240-24952740 1.11e-02 89_[-4(5.50e-05)] chr17:50113562-50114062 4.50e-09 3_[+1(1.22e-08)]_34_[+1(1.70e-09)]_\ 3 chr1:6701523-6702023 8.43e-01 100 chr5:14156516-14157016 2.75e-01 100 chrX:73850725-73851225 7.70e-01 100 chr1:230978713-230979213 1.94e-01 100 chr19:1205158-1205658 7.45e-01 100 chr5:96935124-96935624 1.52e-01 100 chr4:110411662-110412162 1.71e-01 32_[+8(7.99e-05)]_38 chr7:133492152-133492652 1.86e-06 2_[+5(4.89e-07)]_[+6(2.59e-07)]_7_\ [+2(6.53e-06)]_16 chr1:227791310-227791810 9.76e-08 5_[+7(1.48e-05)]_32_[+7(2.69e-06)]_\ 8_[+7(2.56e-08)]_7 chr19:33293292-33293792 2.62e-04 8_[+5(5.00e-09)]_43_[+4(4.71e-05)]_\ 7 chr9:35657612-35658112 8.82e-01 100 chr9:34379216-34379716 3.51e-02 16_[-8(9.23e-05)]_21_[-8(3.11e-05)]_\ 3 chr19:18193247-18193747 2.82e-01 86_[-4(5.05e-05)]_3 chr12:6493410-6493910 8.24e-01 100 chr19:10252256-10252756 2.05e-09 55_[-1(2.01e-10)]_15 chr6:159726793-159727293 1.24e-01 89_[-4(2.13e-05)] chr1:145281098-145281598 1.27e-01 13_[+2(5.03e-06)]_65 chr3:183017842-183018342 7.30e-01 100 chr5:124740922-124741422 6.80e-03 26_[+2(2.65e-06)]_13_[-5(2.02e-06)]_\ 8 chr1:1239705-1240205 3.79e-08 49_[+1(1.92e-11)]_21 chr19:36139809-36140309 1.88e-03 52_[-10(2.74e-08)]_26 chr1:81126879-81127379 1.73e-01 100 chr22:17876824-17877324 7.10e-01 100 chr13:113560186-11356068 1.19e-01 [+4(9.88e-05)]_45_[+4(8.67e-05)]_33 chr19:36214986-36215486 4.29e-03 40_[+1(1.23e-05)]_30 chr6:33204608-33205108 1.00e-05 20_[-1(9.20e-09)]_50 chr5:1801201-1801701 5.97e-01 100 chr17:47649625-47650125 1.38e-02 77_[-6(1.40e-08)]_1 chr16:689436-689936 1.97e-07 14_[+1(2.00e-09)]_56 chrX:65534684-65535184 5.60e-01 100 chr19:35994993-35995493 9.02e-01 100 chr19:42349668-42350168 2.83e-11 13_[+7(2.53e-07)]_5_[-6(2.42e-05)]_\ 11_[-1(8.67e-10)]_3 chr6:24774933-24775433 7.46e-01 100 chr5:49421-49921 1.13e-08 2_[-7(3.56e-10)]_2_[-7(1.10e-09)]_\ 11_[-7(3.56e-10)]_8_[-7(3.56e-10)]_13 chr21:39313553-39314053 5.05e-01 100 chr17:42676572-42677072 6.02e-01 100 chr1:26189281-26189781 1.74e-09 11_[-1(3.46e-07)]_5_[-1(4.26e-10)]_\ 9_[-4(9.83e-06)]_4 chr19:40420482-40420982 7.27e-02 1_[-2(7.11e-06)]_77 chr1:154974027-154974527 1.71e-01 9_[-9(8.87e-05)]_69 chr5:352560-353060 1.03e-07 29_[+8(5.07e-13)]_7_[+8(7.29e-10)]_\ 4 chr10:21525583-21526083 8.01e-01 100 chr10:78029082-78029582 1.74e-05 12_[-1(1.98e-07)]_58 chr12:54052039-54052539 7.67e-01 100 chr5:396964-397464 1.42e-01 9_[-1(2.29e-05)]_8_[-1(1.04e-05)]_\ 23 chr1:35769973-35770473 2.15e-03 22_[-1(1.58e-07)]_48 chr16:30355366-30355866 1.03e-01 21_[+4(5.05e-05)]_19_[+4(1.83e-05)]_\ 38 chr19:34218137-34218637 1.48e-02 22_[+5(1.89e-05)]_47 chr7:148331395-148331895 8.07e-01 100 chr7:73522234-73522734 6.04e-03 16_[+1(4.86e-06)]_54 chr19:48363403-48363903 3.24e-01 100 chr19:36214330-36214830 1.62e-02 100 chr19:1173455-1173955 1.10e-03 3_[+1(8.13e-06)]_67 chr1:27348760-27349260 3.69e-07 28_[-1(6.01e-08)]_2_[-4(8.83e-06)]_\ 18_[-4(1.37e-05)] chr1:173868266-173868766 2.05e-01 100 chr1:31431798-31432298 4.76e-01 100 chr6:31959115-31959615 2.82e-01 100 chr10:75379154-75379654 1.54e-02 57_[+5(4.89e-07)]_12 chr19:39412495-39412995 8.15e-01 100 chr12:131929296-13192979 1.16e-05 2_[+4(4.51e-07)]_29_[+1(3.17e-08)]_\ 28 chr19:11402130-11402630 1.83e-03 36_[+1(1.23e-05)]_34 chr20:48921349-48921849 1.07e-03 7_[-6(8.93e-05)]_12_[-6(4.52e-08)]_\ 37 chr8:33513353-33513853 4.34e-02 50_[+2(8.79e-07)]_28 chr5:684840-685340 2.80e-01 47_[+4(9.83e-06)]_6_[+4(2.42e-05)]_\ 5_[+4(2.65e-05)]_9 chr3:194134796-194135296 5.08e-03 54_[-2(1.08e-06)]_24 chr5:149551536-149552036 6.97e-02 63_[-1(5.79e-06)]_7 chr19:30004318-30004818 2.17e-03 15_[+6(3.49e-05)]_2_[+5(1.47e-05)]_\ 30 chr1:1145217-1145717 2.30e-02 83_[-4(2.65e-05)]_6 chr1:27364297-27364797 2.21e-03 24_[+6(2.96e-05)]_26_[+6(4.00e-05)]_\ 6 chr15:71115050-71115550 2.24e-02 81_[+4(2.39e-06)]_8 chr1:155244574-155245074 8.82e-06 10_[+6(8.08e-08)]_14_[+6(7.60e-08)]_\ 8_[+6(4.40e-14)]_2 chr16:19536-20036 7.30e-10 9_[-4(2.13e-05)]_1_[+7(1.10e-09)]_\ 26_[+7(1.10e-09)]_2_[+7(1.69e-08)]_3 chr22:20117215-20117715 2.27e-08 68_[+1(3.22e-09)]_2 chr3:181328958-181329458 6.22e-02 100 chr4:77075936-77076436 3.28e-01 100 chr17:82586128-82586628 2.48e-05 9_[+4(8.83e-06)]_1_[+8(1.24e-05)]_1_\ [+1(2.15e-06)]_18 chr19:6737938-6738438 3.30e-02 11_[-4(6.64e-05)]_78 chr11:67265972-67266472 1.72e-01 100 chr19:43950894-43951394 1.25e-01 18_[-8(3.72e-05)]_52 chr17:82065712-82066212 3.91e-04 9_[+4(7.83e-07)]_80 chr17:34981743-34982243 8.45e-01 100 chr22:50705039-50705539 1.95e-08 61_[-1(7.29e-11)]_9 chr19:18224075-18224575 4.30e-02 88_[+4(9.24e-05)]_1 chr5:352361-352861 7.77e-09 6_[+8(1.22e-12)]_7_[+8(1.05e-13)]_\ 27 chr1:974695-975195 3.38e-04 12_[+1(1.68e-05)]_2_[+4(2.65e-05)]_\ 4_[+4(7.83e-07)]_[+1(5.31e-06)] chr16:30698971-30699471 3.86e-01 100 chr12:123383426-12338392 1.72e-01 28_[+4(6.31e-05)]_61 chr16:1651042-1651542 4.51e-09 67_[+8(3.53e-14)]_3 chr19:50406345-50406845 1.34e-06 4_[-4(7.83e-07)]_4_[-1(4.79e-07)]_\ 51 chr2:27890118-27890618 7.69e-05 48_[-1(7.96e-09)]_22 chr19:35889342-35889842 3.74e-04 12_[+1(8.06e-07)]_58 chr2:218568520-218569020 1.10e-09 69_[+1(3.54e-10)]_1 chr19:44813525-44814025 3.68e-08 26_[-1(1.86e-08)]_7_[-1(3.76e-09)]_\ 7 chr19:727090-727590 6.99e-08 [-4(8.83e-06)]_[-1(2.15e-06)]_1_\ [+7(4.62e-06)]_25_[+7(2.56e-08)]_1 chr6:167735002-167735502 1.32e-05 1_[-4(7.28e-05)]_1_[-1(3.11e-07)]_\ 10_[-4(2.65e-05)]_15_[-4(8.83e-06)]_10 chr19:50415950-50416450 3.39e-04 22_[-1(4.79e-07)]_48 chr19:40750067-40750567 3.96e-03 15_[+1(4.86e-06)]_55 chr22:46762618-46763118 1.03e-10 51_[+1(4.23e-12)]_19 chr19:11400849-11401349 1.16e-06 15_[+1(1.47e-06)]_55 chr19:39125819-39126319 6.98e-02 28_[+4(3.98e-05)]_61 chr6:82260153-82260653 5.97e-02 61_[+5(7.58e-05)]_8 chr12:51172684-51173184 5.34e-01 100 chr4:705073-705573 2.33e-12 23_[+7(1.56e-07)]_27_[+7(1.10e-09)]_\ 2_[+7(7.57e-05)] chr16:1651582-1652082 2.19e-10 3_[+8(3.45e-16)]_67 chrX:1392315-1392815 1.57e-05 44_[-1(8.67e-10)]_26 chr1:236097030-236097530 7.12e-01 100 chr19:40612052-40612552 1.72e-05 25_[-1(2.87e-05)]_[-1(3.86e-07)]_15 chr19:38196266-38196766 2.22e-02 36_[+4(5.96e-06)]_9_[+4(5.96e-06)]_\ 9_[+4(5.96e-06)]_13 chr5:1501654-1502154 4.50e-01 4_[-9(7.26e-05)]_74 chr19:58557940-58558440 3.56e-05 12_[-1(3.61e-08)]_42_[-4(5.96e-06)]_\ 5 chr1:228452408-228452908 6.91e-05 16_[-4(8.83e-06)]_10_[-4(6.66e-06)]_\ 23_[-4(8.67e-05)]_18 chr19:50790870-50791370 2.59e-06 66_[-1(5.93e-09)]_4 chr7:159013209-159013709 4.89e-08 3_[+4(8.83e-06)]_19_[+1(1.78e-06)]_\ [-7(6.95e-06)]_1_[-7(5.49e-09)]_4 chr11:65551579-65552079 4.18e-10 11_[-7(2.29e-07)]_3_[+1(3.61e-08)]_\ 2_[+4(1.11e-06)]_27 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (10) found. ******************************************************************************** CPU: indra ********************************************************************************