Database and Motifs High-scoring Motif Occurences Debugging Information



FIMO - Motif search tool

FIMO version 4.12.0, (Release date: Tue Jun 27 16:22:50 2017 -0700)

For further information on how to interpret these results or to get a copy of the FIMO software please access http://meme.nbcr.net

If you use FIMO in your research, please cite the following paper:
Charles E. Grant, Timothy L. Bailey, and William Stafford Noble, "FIMO: Scanning for occurrences of a given motif", Bioinformatics, 27(7):1017-1018, 2011. [full text]


DATABASE AND MOTIFS

DATABASE /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/BCL11A.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResultsDefaultMax/BCL11A.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa
Database contains 600 sequences, 300000 residues

MOTIFS /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/MotifData/motif_databases/CIS-BP/Homo_sapiens.meme (DNA)

MOTIF WIDTH BEST POSSIBLE MATCH
M0085_1.02 10 TCGCCTGAGG
M0104_1.02 11 ATATTAATTAA
M0105_1.02 9 TTTTAATTG
M0108_1.02 11 GATAATATTGA
M0177_1.02 10 ACCATATGTT
M0178_1.02 10 AACAGCTGTT
M0189_1.02 8 GCACGTGA
M0195_1.02 10 ACCATATGGT
M0196_1.02 10 GGCACGTGTC
M0198_1.02 10 AGCCCGTGCG
M0199_1.02 13 TAACGACACGTGC
M0211_1.02 8 GCACGTGT
M0212_1.02 10 GGCACGTGCC
M0214_1.02 9 AACATATGG
M0216_1.02 10 CGCAGCTGTG
M0217_1.02 10 ACCATATGGT
M0300_1.02 10 AATGACGTCA
M0305_1.02 9 GCCACGTGT
M0307_1.02 8 ATACGTTG
M0395_1.02 8 GTACTAAT
M0396_1.02 10 AACGGTAGCA
M0398_1.02 11 AGGAAGTGCAA
M0404_1.02 10 AAGGGGGGCA
M0405_1.02 10 TGGGCGTGGC
M0408_1.02 10 ATGTGCACAT
M0413_1.02 10 GTTGCGGGAC
M0415_1.02 8 ATAACGGT
M0422_1.02 10 CCGGGGGGTC
M0424_1.02 10 TTTGACAGCT
M0428_1.02 8 AGGAGCAC
M0431_1.02 9 ACGGTAGCA
M0432_1.02 9 CGCGCGCAC
M0433_1.02 10 ATCTAGAACA
M0436_1.02 10 TTGTTTATTG
M0437_1.02 9 TATATATAT
M0442_1.02 9 AATGCAGTG
M0443_1.02 10 TGGGCGTGGC
M0594_1.02 9 ATTTGAATT
M0603_1.02 7 TTAGCGG
M0607_1.02 9 GCGTAAATA
M0608_1.02 10 GGGGGCGTAA
M0609_1.02 10 CCCCGCGGCC
M0610_1.02 9 ATCGCGTTA
M0629_1.02 11 AATGTATCAAT
M0630_1.02 10 AATGTATCAA
M0632_1.02 10 AATGTATCAA
M0633_1.02 10 TAATGTATTA
M0635_1.02 13 AACATGTATAAAA
M0714_1.02 10 AACCGGAAGT
M0718_1.02 10 ATGTAAACAA
M0719_1.02 8 GTAAACAA
M0728_1.02 12 AATAAACAAACA
M0736_1.02 8 GTAAACAA
M0737_1.02 10 TATGTAAACA
M0747_1.02 10 AATGTAAACA
M0756_1.02 9 GTAAACAAA
M0887_1.02 9 CCTAATGAG
M0890_1.02 8 GTAATCAA
M0891_1.02 10 TTAATTGGTT
M0892_1.02 10 CCTAATTACC
M0893_1.02 10 GTTAATTAAC
M0894_1.02 8 TTAATTAG
M0896_1.02 8 TTAATTAG
M0897_1.02 10 TTTTATGGGC
M0898_1.02 8 TTACGTAA
M0900_1.02 8 TTAATTGG
M0901_1.02 8 CTTGTCAA
M0905_1.02 9 TTAATTACC
M0906_1.02 10 AATTAATTAG
M0931_1.02 9 TAATTAATT
M0937_1.02 7 TGATACC
M0942_1.02 8 TTGTAATT
M0943_1.02 8 GCTAATTA
M0949_1.02 7 TTAATGA
M0952_1.02 8 TGATACCC
M0958_1.02 7 CTAATTA
M0961_1.02 9 CTAATTGGT
M0969_1.02 9 CCAATCAGC
M0975_1.02 9 TAATTAATT
M0994_1.02 9 ATGATACCC
M0996_1.02 7 GAAATCA
M0999_1.02 9 ATTAATTAC
M1007_1.02 9 TTTATGACC
M1012_1.02 9 TTAATGACC
M1016_1.02 7 GTGATAC
M1018_1.02 7 TAATTAA
M1025_1.02 8 GCTAATTA
M1027_1.02 9 TTAATTACC
M1030_1.02 9 ACCACTTAA
M1034_1.02 7 GCAATTA
M1039_1.02 9 GCTAATTGG
M1049_1.02 10 ATGATACCCC
M1070_1.02 9 TTAATGACC
M1071_1.02 8 TTAATGAC
M1073_1.02 9 TTAATGACC
M1110_1.02 10 GGGCAATAGA
M1125_1.02 10 GCTAATTGGC
M1157_1.02 10 TTTTATGACC
M1163_1.02 9 ATTAATTAC
M1266_1.02 10 GACCGAAACC
M1281_1.02 9 CTTACGCAA
M1358_1.02 9 TAACCCTAG
M1359_1.02 10 GTTTGCGCCA
M1418_1.02 8 TGGTACCA
M1432_1.02 10 ATTGACCTCT
M1458_1.02 10 ACTGACCTCG
M1507_1.02 10 AATTTTGGCT
M1528_1.02 10 CCATGGCAAC
M1529_1.02 10 CCATAGCAAC
M1545_1.02 9 CGTACGTCA
M1581_1.02 10 TTTGCTGACT
M1582_1.02 11 ATATATAATAA
M1583_1.02 8 TTCATTGA
M1589_1.02 10 GCAGAACAAT
M1592_1.02 8 AAAACAAT
M1594_1.02 10 CATTGTTCTT
M1601_1.02 9 ATTGTTCTC
M1605_1.02 10 ATTCATCTTT
M1628_1.02 11 AGGTGTGAAGA
M1668_1.02 12 TCCAAACGAGAT
M1838_1.02 15 CATTGCCTCAGGGCA
M1841_1.02 15 GAACACTCTGTTCTT
M1863_1.02 8 GTAAACAT
M1868_1.02 14 ACAGATAAGAATCT
M1871_1.02 10 TGGGTGGGGC
M1882_1.02 21 AAAGTGAAAGTGAAAGTAAAA
M1884_1.02 15 AGCTAAAAATAGCAT
M1889_1.02 10 AAGCACATGG
M1890_1.02 18 AGAGTGCTGATTGGTCCA
M1906_1.02 11 GGGGGCGGGGC
M1915_1.02 20 GCAAGGCATGATGGGAAATC
M1917_1.02 11 GGTCACGTGGC
M1919_1.02 12 CAAGATGGCGGC
M1925_1.02 11 TATTGTGCAAT
M1926_1.02 9 CAGGTGAGG
M1927_1.02 8 GCCACGTG
M1928_1.02 11 GGGAATTTCCC
M1929_1.02 15 CATGTCTGGGCATGT
M1934_1.02 20 AGGTCAGGGTGACCTGGGCC
M1950_1.02 6 GTGGAT
M1955_1.02 11 TTTCCAGGAAA
M1963_1.02 14 GGGGCCGAGGCCTG
M1968_1.02 11 TCCCTGGGGAC
M1970_1.02 6 TGCCAA
M2065_1.02 15 AGGTCAGGGTGACCT
M2264_1.02 8 GCCATCTG
M2267_1.02 11 TTTTATGGCTT
M2268_1.02 11 TATTGCACAAT
M2270_1.02 11 TAATTTAATCA
M2273_1.02 11 GGGCGGGAAGG
M2275_1.02 13 GAACCAGGAAGTG
M2277_1.02 11 ACAGGAAGTGG
M2278_1.02 11 TGTGACTCATT
M2281_1.02 11 TCCAATCCACA
M2283_1.02 15 CAAAAGTAAACAAAG
M2286_1.02 15 TGGACTTTGGACTCT
M2287_1.02 13 GGCCATAAATCAC
M2289_1.02 13 AAGATGATGTCAT
M2292_1.02 11 GGTGACTCATC
M2296_1.02 15 CTGAGTCAGCAATTT
M2299_1.02 13 AGGGACAGCTGCA
M2301_1.02 15 AAATGGACCAATCAG
M2303_1.02 15 TGACCTCTGACCCCT
M2305_1.02 11 TGCGCAGGCGC
M2306_1.02 13 TTCATTTGCATAT
M2307_1.02 15 AGAAAGTGAAAGTGA
M2310_1.02 15 CAAACCACAAACCCC
M2313_1.02 10 CCATTGTTTT
M2314_1.02 15 GGGAGGGGGCGGGGC
M2319_1.02 14 TTCCTTTGATCTTT
M2321_1.02 20 AGACATGCCCAGACATGCCC
M2323_1.02 15 CAGATCTCGCGAGAG
M2385_1.02 11 AAGTAAACAAA
M2387_1.02 10 GTGGGGTGAT
M2388_1.02 10 ATGGGGTGAT
M2390_1.02 8 CAGGAAGG
M2391_1.02 10 GGGGCGGGGC
M2392_1.02 19 GTTGCCATGGCAACCGCGG
M4344_1.02 8 GGTTGCCA
M4427_1.02 21 GTGGCCACCAGGGGGCGCTGT
M4428_1.02 14 GGAACATTCTGTTC
M4438_1.02 15 AGGTCACGGTGACCT
M4444_1.02 14 AGGGGATTTCCCAG
M4451_1.02 11 GGTCACGTGAC
M4452_1.02 15 TCTCGATATGACTCA
M4453_1.02 15 AAGAGGAAGTGAAAC
M4454_1.02 15 AAATCTCGCGAGAAC
M4459_1.02 20 GTGCGGGGGCGGGGGGGGGG
M4461_1.02 21 GCCTTCTGGGAATTGTAGTTC
M4462_1.02 11 CGCCGGAAGTG
M4463_1.02 18 AATGTGGAAATGAGTCAG
M4467_1.02 15 ATGCCAAAAATAGCA
M4469_1.02 14 TCCATGGTGCTGAA
M4471_1.02 15 GCAGCCAAGCGTGAC
M4473_1.02 15 GCCGGCCAATCAGAG
M4476_1.02 15 TCACCTGTTGCTAGG
M4477_1.02 19 CCATGGCCATATAAGGCAA
M4478_1.02 20 CAGGTGATTTCCGGGAAATG
M4479_1.02 11 GCAGCAGCTGT
M4481_1.02 15 GGTCACGTGGCCCGG
M4484_1.02 15 CTGGGAATTGTAGTC
M4509_1.02 17 ATTTGCATAACAAAGGA
M4511_1.02 8 TGACCTCT
M4522_1.02 10 CCGGAAGTGG
M4525_1.02 15 AGCCTCAGGGCATGG
M4526_1.02 15 GGGGGGTGACTCATC
M4527_1.02 21 GGACTACAACTCCCAGCAGGC
M4532_1.02 10 CCACGTGCTC
M4536_1.02 15 GGGGAGGGCGCGCGG
M4537_1.02 15 GGCGGGAAATTTGAA
M4543_1.02 11 GGAACCACGTG
M4545_1.02 15 AGAAAGTGAAAGTGA
M4551_1.02 17 TTCATACTGGAGAGAAA
M4553_1.02 10 GGTCACGTGC
M4565_1.02 14 CAGGATGAGTCACC
M4567_1.02 15 GCAAAGTAAACAGAG
M4569_1.02 18 GTCCCGGGTTCGAATCCC
M4572_1.02 15 TGCTGACTCAGCAAA
M4600_1.02 11 GCAGATAAGGA
M4604_1.02 21 GGGGAGGAGGGAGGGGAGGAG
M4612_1.02 15 CCGCCAGGGGGCGCC
M4619_1.02 11 GGGTGACTCAT
M4623_1.02 15 CGGTGACTCATCCTT
M4629_1.02 17 CATGACTCAGCAATTTT
M4635_1.02 15 GAAAATGAAACTGAA
M4636_1.02 21 CTGCCCTCATCCAAGATGGCG
M4640_1.02 15 GGGCGGGGGTCTCGG
M4665_1.02 15 CAGATAAGAATCTGT
M4680_1.02 8 GTCACGTG
M4681_1.02 10 TGCTGAGTCA
M4692_1.02 10 ACTACAACTC
M4698_1.02 15 CTGGACTTTGGACTC
M4702_1.02 8 TGACCTTT
M4708_1.02 10 TATGCAAATA
M4840_1.02 11 AAATGCGCAAC
M4850_1.02 21 TGTTGTGTCCGTGCCATCTGG
M4930_1.02 11 AAATCGTGACT
M4971_1.02 10 GTAACAGCTG
M5116_1.02 9 ACCACCTGT
M5209_1.02 11 GTGGGCGTGGC
M5234_1.02 10 GGTCACGTAC
M5284_1.02 10 GCTAATTAGC
M5287_1.02 13 CTAATTAAATTAA
M5291_1.02 13 TTAATTTAATTAA
M5292_1.02 13 GGATGATGCAATA
M5293_1.02 14 CGATGACGTCATCG
M5294_1.02 10 GTTAAACGGT
M5300_1.02 17 TAATCGGTATTTAATTG
M5302_1.02 14 TGATGACGTCATCA
M5303_1.02 17 TGCTTTCTAGGAATTCA
M5304_1.02 10 ACCATATGGT
M5307_1.02 12 AAACATATGTTT
M5308_1.02 10 ACCATATGTT
M5310_1.02 8 TTAATTGG
M5320_1.02 15 CCCGCATACAACGAA
M5321_1.02 10 AACACGTGTT
M5322_1.02 8 TTTTTATT
M5323_1.02 14 TGATGACGTCACCG
M5325_1.02 14 TGATGACGTGGCAT
M5335_1.02 18 ATCGATAATTTTATCGAT
M5339_1.02 10 GATAATTAGG
M5342_1.02 8 GTAATTGG
M5343_1.02 8 ATAATTAC
M5344_1.02 8 GTAATTGG
M5345_1.02 10 GTTAATCCGC
M5346_1.02 10 GCTAATCCGT
M5348_1.02 13 CTAATCTAATTAA
M5349_1.02 13 CTAATTTAATCAA
M5363_1.02 12 TTTCCCGCCAAA
M5377_1.02 12 AACCCGGAAGTG
M5388_1.02 10 GCTAATTAGC
M5390_1.02 10 GCTAATTGGG
M5394_1.02 10 GTTAATTGGA
M5398_1.02 10 ACCGGAAGTG
M5414_1.02 10 GTTAATTGGT
M5420_1.02 10 ACCGGAAGTA
M5421_1.02 11 AACCGGAAATA
M5422_1.02 10 ACCGGAAGTG
M5425_1.02 15 CCGGAAGCGGAAGTG
M5427_1.02 10 GCTAATTACC
M5428_1.02 10 GCTAATTACC
M5430_1.02 10 ACCACCTGTT
M5435_1.02 14 TCGCTGTGTCATTC
M5445_1.02 14 AGTAAATATTTTTT
M5446_1.02 7 GTAAACA
M5460_1.02 7 GTAAACA
M5471_1.02 14 GTAAACATGTTTAC
M5480_1.02 10 GCTAATTAGT
M5481_1.02 10 GCTAATTGGT
M5487_1.02 10 TATGCGGGTA
M5490_1.02 16 GCTTCGTGGGGGGTCT
M5491_1.02 14 CTTCGCGGGGGGTC
M5493_1.02 8 GTACGTAA
M5497_1.02 17 AACCGGTTTAACCGGTT
M5500_1.02 10 GCTAATCCCC
M5501_1.02 10 CCTAATCCGC
M5502_1.02 10 TTTAATTAGG
M5503_1.02 10 TTTAATTAGT
M5504_1.02 12 TGGCACGTGCCG
M5506_1.02 12 TGGCACGTGCCA
M5509_1.02 10 GGCACGTGTC
M5512_1.02 9 GGTGGGCAT
M5517_1.02 10 ACTAGTTAAC
M5518_1.02 11 TTTTAATTGCT
M5519_1.02 11 TTTTAATTGGT
M5520_1.02 11 TGTTAATTGCT
M5530_1.02 12 TATAATCGTTTT
M5541_1.02 10 GTTAATTACT
M5542_1.02 10 GCTAATTAGT
M5543_1.02 10 CTTAATTAGT
M5544_1.02 10 TTTTTATGGG
M5547_1.02 11 GGTCGTAAAAT
M5551_1.02 9 TTTTATTAC
M5553_1.02 10 CCAATAAAAA
M5555_1.02 10 GTCGTAAAAA
M5557_1.02 9 GTAATAAAA
M5563_1.02 10 GCTAATTAGC
M5567_1.02 13 GAACGTTCTAGAA
M5568_1.02 15 TTCGAAACGTTCGAA
M5571_1.02 10 GACAGGTGTA
M5581_1.02 12 CATGTCATGTAA
M5582_1.02 12 CATGTCATGTAA
M5583_1.02 8 TTAAGTGC
M5584_1.02 13 TTAATCTAATTAA
M5587_1.02 9 ATGACTCAT
M5591_1.02 18 CAAAAAGGGGCGTGGCAT
M5592_1.02 14 AAGGGGGCGTGGCC
M5593_1.02 11 GGGGGCGTGGC
M5594_1.02 13 CTCGACCTAATTA
M5602_1.02 8 TTAATTGG
M5604_1.02 8 TTAATTAA
M5605_1.02 8 TTAATTAA
M5616_1.02 12 GCTATAAATAGC
M5621_1.02 8 CCTGTCAA
M5623_1.02 10 GCTAATTAAC
M5624_1.02 10 AGTAATTAAC
M5627_1.02 10 CACAGGTGTT
M5628_1.02 8 AGGTGTGA
M5631_1.02 10 GTTAATTAGA
M5632_1.02 10 ATCACGTGAT
M5634_1.02 10 ACCACGTGCC
M5635_1.02 10 TTTAATTACC
M5636_1.02 10 AACAGCTGTT
M5637_1.02 18 TAATTGGTTTTTAATTGC
M5643_1.02 12 ACCGTTAAACGG
M5652_1.02 10 GCCATATGGT
M5653_1.02 10 GACATATGTT
M5660_1.02 15 TTGGCACGGTGCCAA
M5662_1.02 15 TTGGCACAGTGCCAG
M5664_1.02 15 TTGGCACCGTGCCAA
M5672_1.02 10 GCTAATTAGC
M5689_1.02 11 AATTTGCTGAC
M5690_1.02 10 AACATATGTT
M5691_1.02 10 ACCATATGTT
M5693_1.02 10 ACCATATGTT
M5697_1.02 14 ATTATTGATTTTTT
M5702_1.02 17 TGCAGTCATGCGTGACG
M5704_1.02 10 TAATCGATTA
M5705_1.02 8 CTAATTAG
M5709_1.02 10 TAATCGATTA
M5711_1.02 17 TGCAGTCATGCGTGACG
M5714_1.02 11 TAATTTAATTA
M5715_1.02 11 TAATTTAATTA
M5717_1.02 9 CTTAATCCC
M5720_1.02 9 CTTAATCCC
M5722_1.02 12 TGACACCTGTCA
M5729_1.02 9 ATTTGCATA
M5735_1.02 13 AAATTAGCATAAT
M5738_1.02 9 ATTTGCATA
M5740_1.02 14 ATGAATAATTAATG
M5743_1.02 16 ATGCATAATTAATGAG
M5744_1.02 9 ATTTGCATA
M5746_1.02 10 ATAATGAGCT
M5750_1.02 13 GGGGGCCTTGAAA
M5753_1.02 12 CAAGACGCCTTA
M5771_1.02 10 GTTAATTGGC
M5772_1.02 8 TTAATTGG
M5777_1.02 16 CGTTGCCATGGCAACG
M5782_1.02 9 GGATAATCC
M5804_1.02 15 GAGCAACAGGTGGTT
M5805_1.02 13 ATGCAACAGGTGG
M5807_1.02 8 TTAATTGG
M5815_1.02 12 ACAATAACATTG
M5825_1.02 15 AACACTACCATTGTT
M5835_1.02 16 AACAATGTTCATTGTT
M5838_1.02 16 AACAATGTGCAGTGTT
M5856_1.02 12 AGTGGGCGTGGC
M5857_1.02 11 ACCCGGATGTA
M5865_1.02 14 AAAAAGAGGAAGTA
M5873_1.02 10 AGGTGTGAAA
M5875_1.02 20 AGGTGTGAAAAAAGGTGTGA
M5880_1.02 19 AGGTGTGAAATTCACACCT
M5882_1.02 20 TTTCACACCTAGGTGTGAAA
M5883_1.02 16 TCACACCTTCACACCT
M5889_1.02 16 GGTGTGAATTCACACC
M5896_1.02 8 AGGTGTGA
M5903_1.02 12 AAAGATCAAAGG
M5932_1.02 10 GTCACGTGAT
M5934_1.02 12 TGACAGCTGTCA
M5935_1.02 12 TGACAGCTGTCA
M5941_1.02 13 CTAATTTAATTAG
M5944_1.02 8 CTAATTAC
M5945_1.02 8 CTAATTAC
M5949_1.02 8 CTAATTAT
M5955_1.02 11 TAATGGCGGAC
M5958_1.02 13 TATGTCGCGATAG
M5959_1.02 17 TTTCGCCTGGCACGTCA
M5962_1.02 12 TTCGGTGGTCGC
M5965_1.02 15 GCACAGCGGGGGGTC
M5967_1.02 19 ATGTTAAATGTAGATTAAG
M5970_1.02 17 GTCGTGTTGTGGGAAAG
M5971_1.02 14 TCGAGGCTAGACCA
M5972_1.02 17 GAGTATTATGGGATGGA
M5973_1.02 18 AGGTGTTCTGTTAACACT
M5974_1.02 12 GGGTTCGAGGGT
M5976_1.02 17 TTCGTGGCATTTTTCTA
M5977_1.02 10 GTGGGGGGGG
M5979_1.02 12 TGTGGGAAAAGC
M5980_1.02 10 AGGTAGGTAC
M5981_1.02 15 TTTTCAGTGTGTGCA
M5998_1.02 12 GGTGACGTCATT
M6037_1.02 12 TTTGTCATGTAG
M6111_1.02 13 AGAAAGGGTTAAT
M6114_1.02 10 AAAGCAAACA
M6115_1.02 15 CATGTCTGGGCATGT
M6119_1.02 15 AAAAAGAGGAAGTGG
M6123_1.02 15 GGGGTGGGGGAGGGG
M6131_1.02 21 CCGGTTCAAACCGGTTCTGGC
M6139_1.02 9 GCACGCAAC
M6140_1.02 18 ATTGGTTTTATTGGTTAA
M6141_1.02 12 TAATCCAATTAT
M6144_1.02 10 GCCCCCGGGC
M6146_1.02 14 ACGCGCCTCGGGCG
M6147_1.02 22 TTTAATTTGATTTCGATTAATT
M6149_1.02 13 GGTTGGTATTGTG
M6150_1.02 12 GCCTCCCACGCC
M6151_1.02 8 TCACGTGC
M6152_1.02 10 GTGACGTCAC
M6154_1.02 12 TAAGGAAGAAGG
M6155_1.02 12 GTGGTGACGTGG
M6157_1.02 10 TCATTAATTG
M6159_1.02 16 TTCCTAGAAAGCTTTT
M6161_1.02 20 ACCGGGTCACGTGCAGAGGG
M6162_1.02 14 GGGTCACGTGTCCA
M6163_1.02 12 TTTGTTGTGTTC
M6164_1.02 25 ACATAGTGACACCTAGGTGTGAAAT
M6166_1.02 15 ATTATGTTAAATCCC
M6167_1.02 8 ACATAAAT
M6171_1.02 11 AATTGTGCAAT
M6172_1.02 12 AAGATTGCGCAA
M6173_1.02 13 CAGATTGCAAAAT
M6174_1.02 11 AGCCAATCAGC
M6176_1.02 12 TGACCTTTGACC
M6180_1.02 9 GTGACGTCA
M6181_1.02 11 CACTGACGTCA
M6182_1.02 8 CTAATCCC
M6184_1.02 14 AGGGGGATCGATGG
M6185_1.02 7 CGTTGGC
M6186_1.02 11 TGTTACATAAC
M6187_1.02 13 GGGGATTGCATTT
M6188_1.02 8 ATAATTAT
M6189_1.02 10 GATAATTACA
M6191_1.02 10 GGCGCGAAAC
M6192_1.02 10 CGCGCGAAAC
M6194_1.02 10 CGCGCCAAAC
M6196_1.02 13 TAGGGCGCGAAAC
M6197_1.02 9 CGTGACGTC
M6199_1.02 11 GGCGTGGGCGG
M6200_1.02 11 AGAGTGGGTGT
M6201_1.02 11 GGCGGCAGGGC
M6204_1.02 15 TAGCAGGAAGTGAGT
M6205_1.02 14 GGCAAACAGGAAAT
M6206_1.02 11 ATAAGGAAGTA
M6207_1.02 9 ACCGGAAGT
M6208_1.02 12 CCCAGGAAGTGC
M6210_1.02 13 TGCCCACGTGGTG
M6211_1.02 14 CGGGGATACGAAAT
M6212_1.02 13 CCCACGTACGCAC
M6213_1.02 11 ACCGGAAATCC
M6215_1.02 9 TGACCTTGA
M6216_1.02 9 TGACCTTGA
M6221_1.02 11 GCGGGAAGTGG
M6222_1.02 8 CAGGAAGT
M6223_1.02 13 GACAGGAAGTAAC
M6224_1.02 17 GCCACAGGAAGTAACAC
M6225_1.02 16 AAGATAAGATAAGATA
M6226_1.02 10 CAGGAAATAA
M6228_1.02 10 CTGACTCATC
M6234_1.02 13 GCAAAGCAAACAA
M6235_1.02 15 CTTAAGTAAACAACG
M6236_1.02 15 TCTGGCAAAACAAAC
M6237_1.02 9 AAACAAACA
M6238_1.02 11 AAAATAAACAT
M6239_1.02 11 AAAAGTAAACA
M6240_1.02 12 GACCAATCAGAG
M6241_1.02 10 TAAATAAACA
M6242_1.02 13 TAAACAAAAACAA
M6244_1.02 13 AAAAACAAACAAC
M6245_1.02 16 AAAAAGTAAACAAACC
M6246_1.02 13 AGGTAAACAAACA
M6247_1.02 9 AATAAACAA
M6249_1.02 9 AAACAAATT
M6250_1.02 12 AAATAAACAATG
M6251_1.02 12 TTGTGTTTTTTT
M6256_1.02 9 ACAGATAAC
M6257_1.02 17 TAAGAGATAACTTAGAT
M6258_1.02 7 AAGATAA
M6259_1.02 14 CACATGCGGGTATT
M6262_1.02 11 TGCAGTGATTT
M6263_1.02 10 GCTGTGATTT
M6264_1.02 11 CTGGGTGGTCT
M6265_1.02 11 GTGGGTGGTCT
M6266_1.02 11 CTGGGTGGTCC
M6267_1.02 10 GTGGGGGGTA
M6268_1.02 12 AATGCCAGACGC
M6269_1.02 9 ACTCATTGA
M6270_1.02 20 AGGGACGCAGCTGCTCCCCA
M6271_1.02 13 GGGCTCGTGGCGG
M6272_1.02 16 AGGCCACGTGCCGGAT
M6273_1.02 17 GGGGGCACGTGGCATTA
M6274_1.02 9 GGGTTGCCC
M6275_1.02 12 GCGTACGTGCGG
M6276_1.02 16 GCGCTAGCGGACGTTA
M6277_1.02 13 CTGTTACGTAATC
M6278_1.02 12 TAGGGCTGCAAA
M6279_1.02 7 AAAATAC
M6280_1.02 15 AATAATCGCGAATAT
M6281_1.02 15 GGTTAATTATTAACC
M6282_1.02 14 GTTAATCATTAACC
M6285_1.02 14 TTTATTGATTTTTT
M6287_1.02 14 AGAATGTTCTAGAA
M6289_1.02 12 TCATAAATCATC
M6290_1.02 11 CCAATAAAACC
M6291_1.02 10 CATCCATCAA
M6292_1.02 10 CATTAATCAA
M6293_1.02 15 TCCAATCTATTGATT
M6295_1.02 10 CCATCCATCA
M6296_1.02 13 TGCATCAATCATT
M6297_1.02 10 CATTAATCAA
M6298_1.02 11 GCATTAATCAA
M6299_1.02 15 AAAGTAATAAATCAT
M6300_1.02 14 GGGCATCAATCAAA
M6301_1.02 10 AATTAAAGCA
M6302_1.02 11 TCCCTAATAAA
M6303_1.02 8 TTAATTGA
M6304_1.02 10 CCATTAAACT
M6306_1.02 12 TGTCAGGGGGCA
M6308_1.02 14 GGAAAGTGAAAGCA
M6309_1.02 17 GGAAAGCGAAACTGAAA
M6311_1.02 20 TAAAGGAAAGCCAAAAGTGA
M6312_1.02 10 GAAAGTGAAA
M6313_1.02 15 GAGAAAGTGAAACTG
M6314_1.02 12 GAAAGCGAAACT
M6315_1.02 7 GTTAATG
M6316_1.02 9 CCAGGTGCA
M6321_1.02 17 GGCGGGGAGGTGGGGGC
M6322_1.02 11 CAGGGTGTGGC
M6323_1.02 15 TGCCTGGGTGTGGCT
M6324_1.02 10 TGGGCGGGGC
M6325_1.02 8 GGGGGCGG
M6326_1.02 9 CAGGGGGTG
M6327_1.02 7 CTTTGAT
M6328_1.02 13 CACTTTTAATTAG
M6329_1.02 13 AAAATTAATTAAT
M6330_1.02 21 GTGCTGACCCCGCAGCCTTCG
M6331_1.02 9 TGCTGACGG
M6332_1.02 8 TTGCTGAC
M6333_1.02 7 CATGACT
M6336_1.02 17 GGGGGGGGGAGGGAGGG
M6337_1.02 11 GGGGCCGGAGG
M6338_1.02 17 TACAACAACCTGTTCTT
M6339_1.02 7 CTCCGGG
M6342_1.02 12 GCTAAAAATAGC
M6343_1.02 13 CATAAAACTGTCA
M6344_1.02 13 TGACAGCTGTCAA
M6345_1.02 10 ATCACATGAC
M6346_1.02 19 CCACGGCGGTGTCACATGC
M6347_1.02 7 TAATTGT
M6348_1.02 17 AGTGCCGTGTGCAAAAC
M6349_1.02 10 TCAACCTGCA
M6350_1.02 7 CAGTTGG
M6352_1.02 8 CCACGTGG
M6353_1.02 7 GCAGCTG
M6354_1.02 9 GACAGCTGC
M6355_1.02 13 TGACAGCTGCTGC
M6356_1.02 9 GGTGGGGAA
M6357_1.02 8 TTTAATGG
M6358_1.02 12 CGGCAGATGGCC
M6359_1.02 7 AATGACT
M6360_1.02 12 CATGACTCAGCA
M6361_1.02 13 ATGGAAATTTCCA
M6363_1.02 9 AATTTTCCA
M6364_1.02 9 AGTTTTCCA
M6365_1.02 10 AAATTTTCCT
M6366_1.02 15 CATGGAGTTTTCCAC
M6368_1.02 14 ATGCATTACATAAC
M6370_1.02 11 GGAATCTCCCT
M6373_1.02 14 CAGCCAATCAGCGC
M6374_1.02 10 CTCAAGTGCT
M6375_1.02 12 AAACCACTTAAA
M6376_1.02 7 TCAAGTG
M6377_1.02 9 TTCAAGGAC
M6378_1.02 13 AATAAGTATATAA
M6379_1.02 11 AGTTAAGTGGA
M6380_1.02 9 CTAATTGGT
M6381_1.02 10 TCTCCCACGC
M6382_1.02 14 TCTGACCTACTTTT
M6383_1.02 19 CGTTGACCTTTGACCTTTA
M6384_1.02 14 AGGTCATTGACCCT
M6385_1.02 19 CTGAACTTTTTTGACCTCA
M6387_1.02 18 CTGAACTTTCCTGACCCC
M6389_1.02 13 CTGACCTCTGGCC
M6391_1.02 14 TGACTTTTGACTTT
M6392_1.02 18 TCAAGTGAACTTTGTCCT
M6393_1.02 9 GTGACCTTT
M6394_1.02 9 GTGACCTTT
M6395_1.02 10 CTGACCTTTG
M6396_1.02 10 TGGCCTTGAA
M6397_1.02 13 TGACCTTGAACTT
M6399_1.02 21 GTCTTGTTATTGATTTTTTTT
M6400_1.02 8 CTAATCCT
M6401_1.02 15 CTTTAATCCCTTAAC
M6402_1.02 9 TGTAACTGT
M6406_1.02 18 GTTCAGTCATGCGTGACA
M6410_1.02 11 TCAAGCGTGAA
M6411_1.02 14 GTCACTGAAGCGGG
M6412_1.02 15 CCCATCAATCAAATT
M6413_1.02 15 CCATCAATCAATTTA
M6415_1.02 9 CTAATTACC
M6416_1.02 11 TCTGTGGTTTG
M6417_1.02 13 ATATATTCATGAG
M6418_1.02 10 TTTAATCCCA
M6419_1.02 13 CATCAATCAAGCT
M6420_1.02 17 GGGGGCATCAGGAGGGG
M6422_1.02 10 CGGGGGGCCC
M6423_1.02 9 ATTTGCATA
M6425_1.02 14 TTTGCATTACAATG
M6426_1.02 10 CATAAATAAT
M6427_1.02 13 CAGCTCATTAATA
M6429_1.02 13 CATAATTTATGCA
M6430_1.02 7 TGACCTT
M6432_1.02 14 TGACCTTTGTCCTA
M6433_1.02 18 GTGACCTTTGACCTACTT
M6436_1.02 13 TACAGACTGTTCT
M6438_1.02 15 GAGTAATTAATATAA
M6439_1.02 7 TAATCTG
M6440_1.02 7 TTAATTG
M6441_1.02 21 GGACAGCTGTTCTGTTTCCTG
M6442_1.02 17 CCCTGCCCCCCCCTTCC
M6443_1.02 7 TGACCTC
M6445_1.02 11 GCCCTGACCTC
M6446_1.02 20 GTGACCTCTGGGTGACCCCC
M6448_1.02 12 GGGGGATTTCCC
M6449_1.02 12 TGGGGATTTCCC
M6451_1.02 12 GTTGCCAGGGAA
M6453_1.02 14 TTACCATGGCAACC
M6454_1.02 12 TGACCTAGTTTT
M6455_1.02 13 CTGACCTACTTTT
M6456_1.02 22 GGGGGGGGGGGTGGTTTGGGGT
M6457_1.02 10 TAACCACAGA
M6459_1.02 14 AACCACAAACCCCA
M6461_1.02 10 TGTGACCTCA
M6462_1.02 13 GTGACCTTTGACC
M6463_1.02 12 AGCCTGTCTGCC
M6464_1.02 11 GTGTCCGTCTG
M6465_1.02 10 GTGTCTGGCC
M6466_1.02 9 TGTCTGGCC
M6468_1.02 8 CCAGGTGG
M6469_1.02 7 CCAGGTG
M6470_1.02 7 TCTTTGT
M6471_1.02 8 CATTGTTC
M6472_1.02 7 CATTGTT
M6473_1.02 18 CAACAATCTTCATTGTCC
M6474_1.02 19 GGAAAAGAACAATGGGTTC
M6475_1.02 16 ATTTGCATAACAATGG
M6476_1.02 12 GAGAACAAAGCG
M6477_1.02 8 TAACAATA
M6478_1.02 11 AGAACAATGGG
M6482_1.02 20 GGGGGGGGGCGGGGCCGGGG
M6483_1.02 24 GGGGCCAGGGGGGGGGCGGGGCCG
M6485_1.02 12 AAAAAGAGGAAG
M6486_1.02 16 CGGCTGTTACCCTGGG
M6490_1.02 9 AAAACAAAA
M6491_1.02 12 TTTCCAGGAATT
M6492_1.02 13 TTTTCTGGGAATT
M6496_1.02 13 TTTCCCAGAAAAG
M6497_1.02 13 TTCCCAGGAATTT
M6498_1.02 9 TGACCTTGA
M6499_1.02 9 CGTGGGAAA
M6500_1.02 12 GACCATCTGTTC
M6503_1.02 25 GTCGCTTCTCACACCTCTGATGGCA
M6504_1.02 24 AGGTAGAGAATTAGGTGATAAAAA
M6505_1.02 8 AGGTGTGA
M6506_1.02 12 GCGCTTTGTTCT
M6507_1.02 14 CACATTCCTGCGCC
M6508_1.02 15 GATATTTCTGCTCTA
M6509_1.02 12 AAAAATAGCCCT
M6510_1.02 14 TGTTTATGTAAATG
M6513_1.02 11 GCCAGCTGCGG
M6514_1.02 16 GCCTGAACTGGCCAGA
M6515_1.02 14 AAATGGCGGGAAAC
M6516_1.02 11 GACCATCTGGT
M6517_1.02 10 GGTCATGTGG
M6518_1.02 9 GGTCACGTG
M6519_1.02 16 CAGGTGACACCTGACA
M6521_1.02 10 CTGACCTGAG
M6523_1.02 17 TGACCTGACCTGACCTC
M6525_1.02 11 CGCCAAGGAGC
M6527_1.02 10 CCCCAGGTGG
M6529_1.02 7 TCTCTGG
M6532_1.02 7 TGACCTC
M6534_1.02 11 TTAGCTAATTA
M6535_1.02 13 GCGGGGGCGGGGG
M6536_1.02 12 GACGTGTCATTA
M6537_1.02 11 GGGGATTGGCC
M6539_1.02 22 CGGAGAGGGGGAGGGGGGGGGC
M6540_1.02 15 CAATAGCGGTGGTGG
M6542_1.02 13 AGATGATAGAGCC
M6544_1.02 12 GGGGATTTCCCA
M6545_1.02 14 GGTAGGGAAACCCC
M6546_1.02 11 ATTAATAATTA
M6547_1.02 19 GGGGGCCCCAGGCCTCGGC
M6548_1.02 9 GGGGTGGTC
M6549_1.02 9 GGGGTGGTC
M6550_1.02 9 TGGGTGGTC
M6552_1.02 15 GGGGTGGGGGAGGGG
M6553_1.02 12 GAGGGGGGCGGA
M6554_1.02 14 TCCAGATGTTTCGG
M6555_1.02 9 CGATAATGA
M6556_1.02 24 GGGCAACAAATCCCTGCGCCCCGT
M6557_1.02 12 GGAAAAAATCGG
M6558_1.02 15 GCACCCTTGGGTGCC
M6559_1.02 16 CCCACGGTTACTGCCG

Random model letter frequencies (/srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/BCL11A.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResultsDefaultMax/background):
A 0.240 C 0.260 G 0.260 T 0.240


SECTION I: HIGH-SCORING MOTIF OCCURENCES

Motif ID Alt ID Sequence Name Strand Start End p-value q-value Matched Sequence
M6523_1.02 THRB chr22 - 50340800 50340816 3.72e-09 0.00213 TGACCTGAGCTCACCTC
M6523_1.02 THRB chr16 - 1651912 1651928 1.27e-07 0.0302 TGACCTCAGTTCACCTC
M6523_1.02 THRB chr19 + 50406641 50406657 1.58e-07 0.0302 TGACCTTACCTGACGCC
M6523_1.02 THRB chr21 - 43857670 43857686 3.13e-07 0.0352 TGACCTCAGGTGATCTG
M6523_1.02 THRB chr15 - 72107322 72107338 3.13e-07 0.0352 TGACCTCAGGTGATCTG
M6523_1.02 THRB chr19 + 38315779 38315795 3.68e-07 0.0352 TGACCTGCAGTGACCTC
M6523_1.02 THRB chr16 - 30699157 30699173 4.85e-07 0.0368 TGACCTCGCGTGACCCC
M6523_1.02 THRB chr9 - 137023389 137023405 6.41e-07 0.0368 TGTCCTCCCCTGGGCTC
M6523_1.02 THRB chr12 + 10212178 10212194 9.23e-07 0.0368 tgacctcaggtgatccg
M6523_1.02 THRB chr6 + 27684324 27684340 9.23e-07 0.0368 tgacctcaggtgatccg
M6523_1.02 THRB chr19 - 2818332 2818348 1.45e-06 0.0368 TCACCTGCTCTGACCTT
M6523_1.02 THRB chr19 - 2818389 2818405 1.45e-06 0.0368 TCACCTGCTCTGACCTT
M6523_1.02 THRB chr19 - 2818446 2818462 1.45e-06 0.0368 TCACCTGCTCTGACCTT
M6523_1.02 THRB chr19 - 2818474 2818490 1.45e-06 0.0368 TCACCTGCTCTGACCTT
M6523_1.02 THRB chr19 - 2818503 2818519 1.45e-06 0.0368 TCACCTGCTCTGACCTT
M6523_1.02 THRB chr19 - 2818532 2818548 1.45e-06 0.0368 TCACCTGCTCTGACCTT
M6523_1.02 THRB chr19 - 2818560 2818576 1.45e-06 0.0368 TCACCTGCTCTGACCTT
M6523_1.02 THRB chr19 - 2818589 2818605 1.45e-06 0.0368 TCACCTGCTCTGACCTT
M6523_1.02 THRB chr19 - 2818618 2818634 1.45e-06 0.0368 TCACCTGCTCTGACCTT
M6523_1.02 THRB chr1 - 51637264 51637280 1.59e-06 0.0368 TGACCTCATGTGATCCA
M6523_1.02 THRB chr7 - 101138525 101138541 1.69e-06 0.0368 TGTCCTCATCTGAGTCT
M6523_1.02 THRB chr1 - 236097095 236097111 1.99e-06 0.0368 TCACCTGCTCTGACCTG
M6523_1.02 THRB chr16 - 30381484 30381500 2e-06 0.0368 TGACCTCACATCCTCTC
M6523_1.02 THRB chr3 - 190424696 190424712 2.04e-06 0.0368 TGACCTCAGGTCATCCG
M6523_1.02 THRB chr1 + 28373516 28373532 2.15e-06 0.0368 tgacctcagatgatccg
M6523_1.02 THRB chr16 - 1651177 1651193 2.27e-06 0.0368 TGACCTCAGTCCACCTC
M6523_1.02 THRB chr16 - 1651397 1651413 2.27e-06 0.0368 TGACCTCAGTCCACCTC
M6523_1.02 THRB chr16 - 1651456 1651472 2.27e-06 0.0368 TGACCTCAGTCCACCTC
M6523_1.02 THRB chr16 - 1651520 1651536 2.27e-06 0.0368 TGACCTCAGTCCACCTC
M6523_1.02 THRB chr16 - 1651690 1651706 2.27e-06 0.0368 TGACCTCAGTCCACCTC
M6523_1.02 THRB chr16 - 1651754 1651770 2.27e-06 0.0368 TGACCTCAGTCCACCTC
M6523_1.02 THRB chr16 - 1651976 1651992 2.27e-06 0.0368 TGACCTCAGTCCACCTC
M6523_1.02 THRB chr1 - 39262175 39262191 2.42e-06 0.0368 TGACCTCAAGTGATCTG
M6523_1.02 THRB chr12 - 122368716 122368732 2.42e-06 0.0368 TGACCTCAAGTGATCTG
M6523_1.02 THRB chr19 + 2529444 2529460 2.44e-06 0.0368 tgacctcaggtgatcca
M6523_1.02 THRB chr6 + 27602461 27602477 2.44e-06 0.0368 tgacctcaggtgatcca
M6523_1.02 THRB chr1 + 61057841 61057857 2.44e-06 0.0368 tgacctcaggtgatcca
M6523_1.02 THRB chr12 - 101460184 101460200 2.44e-06 0.0368 TGACCTCAGGTGATCCA
M6523_1.02 THRB chr3 + 190424700 190424716 3.51e-06 0.0509 tgacctgaggtcaggag
M6523_1.02 THRB chrX + 1392584 1392600 3.55e-06 0.0509 TGACCTCCGGGCAGCTC
M6523_1.02 THRB chr16 - 1651276 1651292 4.64e-06 0.0649 TGACCTCAGTCCAGCTC
M6523_1.02 THRB chr1 + 1145473 1145489 5.34e-06 0.0728 TGACCCCACCTGACTTT
M6523_1.02 THRB chr22 + 50705318 50705334 5.59e-06 0.0728 TGACCTCAGGCTGCCCC
M6523_1.02 THRB chr16 - 1651156 1651172 5.71e-06 0.0728 TGACCTCAGTCCACCTT
M6523_1.02 THRB chr16 - 1651850 1651866 5.71e-06 0.0728 TGACCTCAGTCCACCTT
M6523_1.02 THRB chr15 - 70494343 70494359 6.18e-06 0.0771 TGACCTCATCCCGGGTT
M6523_1.02 THRB chr19 + 1254804 1254820 6.66e-06 0.0813 TCTCCTGACCTGGGCTG
M6523_1.02 THRB chr22 + 37570566 37570582 7.06e-06 0.0844 TGACCTCACCTTGACCT
M6523_1.02 THRB chr20 + 48921453 48921469 7.68e-06 0.09 TCACCTCCCGTTACCTT
M6523_1.02 THRB chr7 + 70092375 70092391 7.89e-06 0.0905 TCACATGAGCTGAGCTC
M6523_1.02 THRB chr19 - 11400917 11400933 8.44e-06 0.0936 TGACCTGACCCCAGTCT
M6523_1.02 THRB chr10 + 94673777 94673793 8.48e-06 0.0936 tcacctcagatgacatc
M6523_1.02 THRB chr20 - 3173360 3173376 8.66e-06 0.0937 TGACCTGACCCGGACTG
M6523_1.02 THRB chr19 - 2529756 2529772 8.93e-06 0.0949 TGACCTCACCTCTCCCT
M6523_1.02 THRB chr20 + 34390979 34390995 9.55e-06 0.0965 tgacctcaggtgattca
M6523_1.02 THRB chr10 + 94673736 94673752 9.6e-06 0.0965 tgacatcaccttggccc
M6523_1.02 THRB chr19 + 10252221 10252237 9.85e-06 0.0965 TGACCTCCCGCGGCGTG
M6523_1.02 THRB chr1 + 153566472 153566488 1.02e-05 0.0965 TGTCCTCCCCAGACCCG
M6523_1.02 THRB chr19 + 17309161 17309177 1.02e-05 0.0965 tgacctcaggcgatcta
M6523_1.02 THRB chr12 + 114914541 114914557 1.02e-05 0.0965 TAACCTCAGATGCCCTC
M6523_1.02 THRB chr12 + 123383539 123383555 1.03e-05 0.0965 ggacctcaggtgatccg
M6523_1.02 THRB chr17 - 46101292 46101308 1.09e-05 0.0988 TCTCCTGATCTTCCCTC
M6523_1.02 THRB chr1 - 16727744 16727760 1.12e-05 0.0988 TGTCCTGCCCGCAGCTT
M6523_1.02 THRB chr21 - 46124984 46125000 1.15e-05 0.0988 TGACCTTCCCCCACCCC
M6523_1.02 THRB chr17 - 77234150 77234166 1.16e-05 0.0988 GGACCTGACCGGCCCCC
M6523_1.02 THRB chr19 + 727336 727352 1.18e-05 0.0988 tgacctgaccccaacct
M6523_1.02 THRB chr7 - 74079618 74079634 1.18e-05 0.0988 TGACCTCAAGTGATCAT
M6523_1.02 THRB chr6 + 27672224 27672240 1.19e-05 0.0988 tgacctcaaatgatccg
M6523_1.02 THRB chr1 - 12478589 12478605 1.2e-05 0.0988 TGACCTCAGATGGGCAA
M6523_1.02 THRB chr16 - 1651488 1651504 1.24e-05 0.0988 TGACCTCAATCCACCTC
M6523_1.02 THRB chr16 - 1651722 1651738 1.24e-05 0.0988 TGACCTCAATCCACCTC
M6523_1.02 THRB chr11 + 76209136 76209152 1.24e-05 0.0988 TGACCTGCCCGGCCCCT
M6523_1.02 THRB chr19 + 6738261 6738277 1.27e-05 0.0988 TGACCCCAGGTGAACTC
M6523_1.02 THRB chr1 + 232950639 232950655 1.29e-05 0.0988 GGACCTGACCTGAATTG
M6523_1.02 THRB chr12 + 132363687 132363703 1.29e-05 0.0988 TGACCTCGTGTCAAGTC
M6523_1.02 THRB chr19 - 55517614 55517630 1.4e-05 0.106 GGACCTGCTCTGAGGTA
M6523_1.02 THRB chr1 + 228861212 228861228 1.56e-05 0.116 TCACCTTAGCTCACGTG
M6523_1.02 THRB chr19 + 50416145 50416161 1.68e-05 0.124 TGACCTCCTGACCCCTT
M6523_1.02 THRB chr5 - 98773525 98773541 1.72e-05 0.124 TGACCGCACGTCAGCCC
M6523_1.02 THRB chr12 - 122368658 122368674 1.73e-05 0.124 TCACCCCACCTGGCCTC
M6523_1.02 THRB chr19 + 50406621 50406637 1.78e-05 0.126 TGACCTGCTGTTATGAC
M6523_1.02 THRB chr15 - 70494543 70494559 1.8e-05 0.126 TGTCATCACCTGACTCG
M6523_1.02 THRB chr17 + 1115172 1115188 1.89e-05 0.131 TGACATCAGATGACTCT
M6523_1.02 THRB chr1 - 974944 974960 1.95e-05 0.133 TGACCTCACATACTCTG
M6523_1.02 THRB chr10 + 121832041 121832057 2.14e-05 0.143 TGACATGATCTTCCGCC
M6523_1.02 THRB chr19 - 1173919 1173935 2.17e-05 0.143 TGACCTGCCCCCCCGCC
M6523_1.02 THRB chr1 + 1145434 1145450 2.19e-05 0.143 TGACCTGACCGCACGGC
M6523_1.02 THRB chr5 + 69521063 69521079 2.2e-05 0.143 tgacctcaggcgatcca
M6523_1.02 THRB chr20 - 62320893 62320909 2.21e-05 0.143 TGACCCCACATCGCCTG
M6523_1.02 THRB chr19 + 17308774 17308790 2.25e-05 0.143 tgtcctgcttcggcctc
M6523_1.02 THRB chr17 + 51166207 51166223 2.27e-05 0.143 TGAACTCATAGGACGTC
M6523_1.02 THRB chr19 + 47253378 47253394 2.3e-05 0.143 TGACCTTGAGTgagctc
M6523_1.02 THRB chr11 - 118998346 118998362 2.46e-05 0.152 TGACCTGCCCCGCACTC
M6523_1.02 THRB chr1 + 167658657 167658673 2.53e-05 0.155 tgacctcaaatgatcca
M6523_1.02 THRB chr2 + 200786723 200786739 2.58e-05 0.156 TGACCTGCTGAGGCCAG
M6523_1.02 THRB chr1 + 1145377 1145393 2.64e-05 0.158 TGACCTCATGACCCCCA
M6523_1.02 THRB chr16 - 1651818 1651834 2.71e-05 0.161 TGACCTCAATCCACCTT
M6523_1.02 THRB chr20 - 62320989 62321005 2.78e-05 0.161 TGACCTCATGACCTCTG
M6523_1.02 THRB chr3 - 48635749 48635765 2.82e-05 0.161 GGACCTGGGATCAGCTC
M6523_1.02 THRB chr17 + 42676704 42676720 2.84e-05 0.161 TGTCCTGGGCTGGGGTG
M6523_1.02 THRB chr22 + 27213089 27213105 2.87e-05 0.161 TCTCCTCATGAGACCCT
M6523_1.02 THRB chr20 - 62321020 62321036 2.87e-05 0.161 GGACCTCCCCACAGGTC
M6523_1.02 THRB chr19 + 13847163 13847179 2.93e-05 0.163 TGACCTGGCCCCAGGCC
M6523_1.02 THRB chr1 + 1000917 1000933 3.16e-05 0.172 TGACGTCATGTGGCCCG
M6523_1.02 THRB chr6 + 32636770 32636786 3.16e-05 0.172 TGACCTCATCTATCCAC
M6523_1.02 THRB chr1 + 237864465 237864481 3.23e-05 0.175 tgacctgcgcacgtgtc
M6523_1.02 THRB chr1 - 27364588 27364604 3.32e-05 0.178 TGACCTCCACTAATCCC
M6523_1.02 THRB chr12 + 71627868 71627884 3.53e-05 0.179 TGACATCATCTGGAGTG
M6523_1.02 THRB chr11 + 64259533 64259549 3.55e-05 0.179 TGACCTCAGTAAACCAC
M6523_1.02 THRB chr17 - 7836852 7836868 3.57e-05 0.179 TGACATCATCCCAGGCC
M6523_1.02 THRB chr19 + 18223990 18224006 3.58e-05 0.179 GGTCCTGCCCTAGGCTC
M6523_1.02 THRB chr21 + 43857674 43857690 3.71e-05 0.179 tcacctgaggtcaggag
M6523_1.02 THRB chr15 + 72107326 72107342 3.71e-05 0.179 tcacctgaggtcaggag
M6523_1.02 THRB chr19 - 2529440 2529456 3.71e-05 0.179 TCACCTGAGGTCAGGAG
M6523_1.02 THRB chr12 - 10212174 10212190 3.71e-05 0.179 TCACCTGAGGTCAGGAG
M6523_1.02 THRB chr6 - 27602457 27602473 3.71e-05 0.179 TCACCTGAGGTCAGGAG
M6523_1.02 THRB chr6 - 27684320 27684336 3.71e-05 0.179 TCACCTGAGGTCAGGAG
M6523_1.02 THRB chr20 - 34390975 34390991 3.71e-05 0.179 TCACCTGAGGTCAGGAG
M6523_1.02 THRB chr1 - 61057837 61057853 3.71e-05 0.179 TCACCTGAGGTCAGGAG
M6523_1.02 THRB chr21 - 26796382 26796398 3.92e-05 0.187 TGTCATCATCTCACATT
M6523_1.02 THRB chr17 + 27353829 27353845 3.94e-05 0.187 TGACATCATCGTGCCCC
M6523_1.02 THRB chr10 - 72204351 72204367 3.97e-05 0.187 TGAGCTCATGTCCCGTC
M6523_1.02 THRB chr16 - 1651944 1651960 4.01e-05 0.187 TGACCTCAATCCACTTC
M6523_1.02 THRB chr19 - 35889548 35889564 4.17e-05 0.191 GGTCCTGACCTCAGATG
M6523_1.02 THRB chr15 - 40092665 40092681 4.17e-05 0.191 GGACCTGGGATAACCTC
M6523_1.02 THRB chr21 - 36210282 36210298 4.23e-05 0.192 TGACCTCAAGTGATTCA
M6523_1.02 THRB chr1 + 1145569 1145585 4.32e-05 0.195 TGACCTCACTGACCCCC
M6523_1.02 THRB chr19 - 35889577 35889593 4.42e-05 0.197 TGACCTCCTACCCCCTG
M6523_1.02 THRB chr6 - 43627588 43627604 4.44e-05 0.197 TCACCTCCACTGAGGTT
M6523_1.02 THRB chr19 - 39033246 39033262 4.47e-05 0.197 TGACCTCAAGCGATCCG
M6523_1.02 THRB chr19 + 58558131 58558147 4.68e-05 0.205 TGACCTCCGACCCCCCC
M6523_1.02 THRB chr20 + 48921403 48921419 4.76e-05 0.206 TTTCCTCATCTCCTCTC
M6523_1.02 THRB chr16 - 1651126 1651142 4.78e-05 0.206 TGACCTCAATCTACCTT
M6523_1.02 THRB chr19 + 50406736 50406752 4.84e-05 0.207 TGGCCTGACCACAGGTC
M6523_1.02 THRB chr12 + 101459941 101459957 4.88e-05 0.208 tgacctccctgtccctc
M6523_1.02 THRB chr1 + 974843 974859 5.1e-05 0.211 GGCCCTCAGCTCAGCCC
M6523_1.02 THRB chr1 + 1145407 1145423 5.1e-05 0.211 CGACCCCACCTGACCTC
M6523_1.02 THRB chr1 + 1145538 1145554 5.17e-05 0.211 CGACCCGATCTGACCTC
M6523_1.02 THRB chr14 + 20343273 20343289 5.17e-05 0.211 TCACCTCCCCGAAGCTC
M6523_1.02 THRB chr1 + 228452436 228452452 5.17e-05 0.211 TGACTTGCTGTGACTCC
M6523_1.02 THRB chr19 - 6738113 6738129 5.19e-05 0.211 TAACCTGAGGCCAGCTT
M6523_1.02 THRB chr1 + 211675881 211675897 5.24e-05 0.211 GGTCCTCCCCTCAGGCT
M6523_1.02 THRB chr6 + 56529603 56529619 5.31e-05 0.211 AGACCTGCTGTGACTTT
M6523_1.02 THRB chr17 - 8222772 8222788 5.33e-05 0.211 TTACCTGACCAGCGCTG
M6523_1.02 THRB chr2 + 191321959 191321975 5.51e-05 0.211 TGACCTCACCCCTGCTT
M6523_1.02 THRB chr17 + 27353819 27353835 5.54e-05 0.211 TTTCCTCCGCTGACATC
M6523_1.02 THRB chr19 + 44903757 44903773 5.56e-05 0.211 TGACCTTCCCCCAGCCG
M6523_1.02 THRB chr5 - 684995 685011 5.56e-05 0.211 TGTCCTGGGGCGGCCCC
M6523_1.02 THRB chr5 + 149551594 149551610 5.59e-05 0.211 TGTCCTCACCCCCGTCC
M6523_1.02 THRB chr16 - 1651880 1651896 5.59e-05 0.211 TGACCTCAATCCATCTC
M6523_1.02 THRB chr2 - 25078551 25078567 5.59e-05 0.211 TGACTTCACCTGCCTTT
M6523_1.02 THRB chr5 + 173057452 173057468 5.63e-05 0.211 TCTCCTCACACGAGCTG
M6523_1.02 THRB chr8 - 25998850 25998866 5.68e-05 0.211 TGAACTCATCTGTGCTC
M6523_1.02 THRB chr1 + 175471199 175471215 5.71e-05 0.211 TGTCCTTCCCTGCCCAT
M6523_1.02 THRB chr19 - 38667250 38667266 5.71e-05 0.211 TGACATCACCCTAGGTT
M6523_1.02 THRB chr6 + 30907747 30907763 5.73e-05 0.211 tgacctcgggtgattcg
M6523_1.02 THRB chr17 + 4811185 4811201 5.81e-05 0.211 TAACCTCCTATAACCTT
M6523_1.02 THRB chr19 + 50791030 50791046 5.88e-05 0.211 TGACCCCATCTCAACCT
M6523_1.02 THRB chr11 + 65637020 65637036 5.93e-05 0.211 GGACCTGCTCTGCTGCC
M6523_1.02 THRB chr15 + 70494175 70494191 5.93e-05 0.211 GGACCTCCTCTACCTTC
M6523_1.02 THRB chr6 - 85679122 85679138 5.93e-05 0.211 GGTCCTAAGCTGAGGCC
M6523_1.02 THRB chr1 + 1145429 1145445 6.06e-05 0.211 CGACCTGACCTGACCGC
M6523_1.02 THRB chr19 + 50406731 50406747 6.06e-05 0.211 TTTCCTGGCCTGACCAC
M6523_1.02 THRB chr12 - 6493392 6493408 6.06e-05 0.211 GGACCTCAGCTTGTCCG
M6523_1.02 THRB chr12 - 124940347 124940363 6.06e-05 0.211 GAACCTGACATGAGGCC
M6523_1.02 THRB chr19 + 1254679 1254695 6.49e-05 0.224 TGACATGACCTGGACCA
M6523_1.02 THRB chr6 - 32636867 32636883 6.6e-05 0.227 TGACCTCATGATCTGCC
M6523_1.02 THRB chr19 + 40590635 40590651 6.65e-05 0.227 TGTCCTGACCCTCGGTG
M6523_1.02 THRB chr19 - 1205474 1205490 6.88e-05 0.232 TGACCTCGGTGGGGCTC
M6523_1.02 THRB chr22 - 19984253 19984269 6.88e-05 0.232 GGTCCTGAGATGTCCTC
M6523_1.02 THRB chr1 + 16123068 16123084 6.94e-05 0.232 gcacctcacgtcatgcc
M6523_1.02 THRB chr19 + 1254674 1254690 7e-05 0.232 TCGCCTGACATGACCTG
M6523_1.02 THRB chr5 - 139518144 139518160 7.09e-05 0.232 TGTCCTACTCTGGCGCG
M6523_1.02 THRB chr1 + 1145417 1145433 7.12e-05 0.232 TGACCTCATGGCCGACC
M6523_1.02 THRB chr1 + 1145526 1145542 7.12e-05 0.232 TGACCTCATGGCCGACC
M6523_1.02 THRB chr12 + 10212298 10212314 7.12e-05 0.232 TGACATCATGTCTCCTT
M6523_1.02 THRB chr19 - 43572514 43572530 7.51e-05 0.244 GCACCTGACCTCAGTCT
M6523_1.02 THRB chr1 + 27349079 27349095 7.61e-05 0.245 GGACCTGATTTCCCATC
M6523_1.02 THRB chr19 + 50416204 50416220 7.8e-05 0.248 TGACCTGAGAGCCCTAC
M6523_1.02 THRB chr5 + 1801430 1801446 7.9e-05 0.248 TGACCTTCTGCCGGCTG
M6523_1.02 THRB chr1 - 44800104 44800120 7.9e-05 0.248 TGTCCGCCTCTCACCCC
M6523_1.02 THRB chr20 + 62320993 62321009 7.9e-05 0.248 GGTCATGAGGTCAGCTT
M6523_1.02 THRB chr6 + 167735246 167735262 7.9e-05 0.248 TGACCTTCCCTGCTGAC
M6523_1.02 THRB chr10 + 101442446 101442462 7.97e-05 0.248 TGACCTCAGTCTAACCC
M6523_1.02 THRB chr1 - 38786812 38786828 8.1e-05 0.25 TCACCTGACCTCGTGAT
M6523_1.02 THRB chr19 + 29666372 29666388 8.24e-05 0.25 TGAGCTGAGATGACTCT
M6523_1.02 THRB chr19 - 34134778 34134794 8.3e-05 0.25 TGACCTGACGGCGCCGG
M6523_1.02 THRB chr19 - 38196502 38196518 8.3e-05 0.25 GCTCCTCCCTTGACCTC
M6523_1.02 THRB chr19 - 38196582 38196598 8.3e-05 0.25 GCTCCTCCCTTGACCTC
M6523_1.02 THRB chr20 + 3173292 3173308 8.37e-05 0.25 TGACATCATCCGCCTCC
M6523_1.02 THRB chr17 + 45148639 45148655 8.37e-05 0.25 TGTCCTCTGCTGAGGCT
M6523_1.02 THRB chr12 - 101459864 101459880 8.41e-05 0.25 GCACCTCATGCAACCTC
M6523_1.02 THRB chr1 + 228452628 228452644 8.41e-05 0.25 tgacccctcctgacctt
M6523_1.02 THRB chr13 + 20814771 20814787 8.48e-05 0.251 TGACCCCACTTTACTCC
M6523_1.02 THRB chr19 - 17308723 17308739 8.76e-05 0.258 TGAGCTGAGATCGCGCC
M6523_1.02 THRB chr5 - 1801518 1801534 8.83e-05 0.259 TGACCTTCTCCCCGGTC
M6523_1.02 THRB chr1 + 233636149 233636165 8.98e-05 0.262 ggaccttatgggccctg
M6523_1.02 THRB chr1 + 232950634 232950650 9.06e-05 0.262 GGTCCGGACCTGACCTG
M6523_1.02 THRB chr20 - 20216212 20216228 9.2e-05 0.265 TGACACCATCTGGCGCC
M6523_1.02 THRB chr22 - 24727364 24727380 9.32e-05 0.267 TGACCTCCTCTTTGGCC
M6523_1.02 THRB chr12 + 51026289 51026305 9.51e-05 0.27 TGACCTTGCCTTCCCCT
M6523_1.02 THRB chr8 - 123156995 123157011 9.51e-05 0.27 CGACCTGCCCTCGCCCT
M6523_1.02 THRB chr6 + 28898485 28898501 9.55e-05 0.27 tggcatgatcttagctc
M6523_1.02 THRB chr11 - 73377252 73377268 9.75e-05 0.274 TGACACCACTTGACCCC
M6523_1.02 THRB chr21 + 6565364 6565380 9.83e-05 0.275 TGACATCACGTGCCACG
M6523_1.02 THRB chr1 + 173868468 173868484 9.99e-05 0.278 TCACCTCGCCCGCCCTC

DEBUGGING INFORMATION

Command line:

/software/meme/4.12.0/bin/fimo --parse-genomic-coord --verbosity 1 --oc /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/BCL11A.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResultsDefaultMax/fimo_out_8 --bgfile /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/BCL11A.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResultsDefaultMax/background --motif M6523_1.02 /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/MotifData/motif_databases/CIS-BP/Homo_sapiens.meme /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/BCL11A.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResultsDefaultMax/BCL11A.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa

Settings:

output_directory = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/BCL11A.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResultsDefaultMax/fimo_out_8 MEME file name = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/MotifData/motif_databases/CIS-BP/Homo_sapiens.meme sequence file name = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/BCL11A.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResultsDefaultMax/BCL11A.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa
background file name = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/BCL11A.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResultsDefaultMax/background alphabet = DNA max stored scores = 100000
allow clobber = true compute q-values = true parse genomic coord. = true
text only = false scan both strands = true max strand = false
threshold type = p-value output theshold = 0.0001 pseudocount = 0.1
alpha = 1 verbosity = 1

This information can be useful in the event you wish to report a problem with the FIMO software.


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