Database and Motifs | High-scoring Motif Occurences | Debugging Information |
FIMO version 4.12.0, (Release date: Tue Jun 27 16:22:50 2017 -0700)
For further information on how to interpret these results or to get a copy of the FIMO software please access http://meme.nbcr.net
If you use FIMO in your research, please cite the following paper:
Charles E. Grant, Timothy L. Bailey, and William Stafford Noble,
"FIMO: Scanning for occurrences of a given motif",
Bioinformatics, 27(7):1017-1018, 2011.
[full text]
DATABASE /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/BCL11A.IDR0.05.filt.narrowPeak.outsidePolsteinDNase.summitPlusMinus250bp.MemeChipResults/BCL11A.IDR0.05.filt.narrowPeak.outsidePolsteinDNase.summitPlusMinus250bp.fa
Database contains 600 sequences, 300000 residues
MOTIFS /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/BCL11A.IDR0.05.filt.narrowPeak.outsidePolsteinDNase.summitPlusMinus250bp.MemeChipResults/meme_out/meme.xml (DNA)
MOTIF | WIDTH | BEST POSSIBLE MATCH |
---|---|---|
CCTCRGCCTCCCAAAGTGCTGGGATTACAGG | 31 | CCTCGGCCTCCCAAAGTGCTGGGATTACAGG |
CYYTGACCYCTGACCYYNVV | 20 | CTCTGACCCCTGACCTCAAC |
CAGCCTGGCCAACATRGTGAAA | 22 | CAGCCTGGCCAACATGGTGAAA |
AMAHAAAMAMACAMAM | 16 | AAATAAAAAAACAAAA |
CRTGAGYCACCGCGCC | 16 | CGTGAGCCACCGCGCC |
GGGKSAGGGDSRGGGKSAGKGG | 22 | GGGTGAGGGTGAGGGTCAGGGG |
RAGGTCAGDGG | 11 | GAGGTCAGGGG |
GCAGTGGCRYRATCWYGGCTCACTGCARCCT | 31 | GCAGTGGCACGATCATGGCTCACTGCAACCT |
TATATTTYRKGTACTTTSATATTTTATRTACAGTATATAATAYWHAKTTK | 50 | TATATTTTATGTACTTTGATATTTTATGTACAGTATATAATATATATTTG |
AAACYCTWCWAGAYRTWKRCTTWGGCAARGAWTTCATGACCWRGAMCYC | 49 | AAACTCTTCTAGACATTGACTTAGGCAAGGATTTCATGACCAAGAACCC |
Random model letter frequencies (/srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/BCL11A.IDR0.05.filt.narrowPeak.outsidePolsteinDNase.summitPlusMinus250bp.MemeChipResults/background):
A 0.256 C 0.244 G 0.244 T 0.256
Motif ID | Alt ID | Sequence Name | Strand | Start | End | p-value | q-value | Matched Sequence |
---|---|---|---|---|---|---|---|---|
CRTGAGYCACCGCGCC | MEME-5 | chr19 | - | 1443590 | 1443605 | 1.85e-10 | 1.79e-05 | CGTGAGCCACCGCGCC |
CRTGAGYCACCGCGCC | MEME-5 | chr19 | - | 2818733 | 2818748 | 1.85e-10 | 1.79e-05 | CGTGAGCCACCGCGCC |
CRTGAGYCACCGCGCC | MEME-5 | chr7 | + | 6374233 | 6374248 | 1.85e-10 | 1.79e-05 | cgtgagccaccgcgcc |
CRTGAGYCACCGCGCC | MEME-5 | chr6 | + | 28898390 | 28898405 | 1.85e-10 | 1.79e-05 | cgtgagccaccgcgcc |
CRTGAGYCACCGCGCC | MEME-5 | chr19 | + | 34218282 | 34218297 | 1.85e-10 | 1.79e-05 | cgtgagccaccgcgcc |
CRTGAGYCACCGCGCC | MEME-5 | chr19 | + | 39121857 | 39121872 | 1.85e-10 | 1.79e-05 | cgtgagccaccgcgcc |
CRTGAGYCACCGCGCC | MEME-5 | chr6 | + | 30907798 | 30907813 | 3.78e-10 | 3.13e-05 | cgtgagtcaccgcgcc |
CRTGAGYCACCGCGCC | MEME-5 | chr19 | + | 33172042 | 33172057 | 5.71e-10 | 4.14e-05 | catgagccaccgcgcc |
CRTGAGYCACCGCGCC | MEME-5 | chr1 | - | 205266313 | 205266328 | 7.73e-10 | 4.36e-05 | CATGAGTCACCGCGCC |
CRTGAGYCACCGCGCC | MEME-5 | chr19 | + | 34216736 | 34216751 | 9.66e-10 | 4.36e-05 | cgtgagccaccgcacc |
CRTGAGYCACCGCGCC | MEME-5 | chr22 | - | 41672336 | 41672351 | 9.66e-10 | 4.36e-05 | CGTGAGCCACCGCACC |
CRTGAGYCACCGCGCC | MEME-5 | chr3 | + | 48926548 | 48926563 | 9.66e-10 | 4.36e-05 | cgtgagccaccgcacc |
CRTGAGYCACCGCGCC | MEME-5 | chr19 | + | 17308946 | 17308961 | 1.16e-09 | 4.36e-05 | cgtgagccactgcgcc |
CRTGAGYCACCGCGCC | MEME-5 | chr6 | - | 31796183 | 31796198 | 1.16e-09 | 4.36e-05 | CGTGAGCCACTGCGCC |
CRTGAGYCACCGCGCC | MEME-5 | chr1 | - | 16862672 | 16862687 | 1.35e-09 | 4.36e-05 | CGTGAGCCACCGTGCC |
CRTGAGYCACCGCGCC | MEME-5 | chr19 | - | 44886443 | 44886458 | 1.35e-09 | 4.36e-05 | CGTGAGCCACCGTGCC |
CRTGAGYCACCGCGCC | MEME-5 | chr1 | + | 16545241 | 16545256 | 1.35e-09 | 4.36e-05 | cgtgagccaccgtgcc |
CRTGAGYCACCGCGCC | MEME-5 | chr1 | + | 16627778 | 16627793 | 1.35e-09 | 4.36e-05 | cgtgagccaccgtgcc |
CRTGAGYCACCGCGCC | MEME-5 | chr6 | + | 37104491 | 37104506 | 1.96e-09 | 5.69e-05 | catgagccaccgcacc |
CRTGAGYCACCGCGCC | MEME-5 | chr1 | - | 223840975 | 223840990 | 1.96e-09 | 5.69e-05 | CATGAGCCACCGCACC |
CRTGAGYCACCGCGCC | MEME-5 | chr8 | - | 6266025 | 6266040 | 2.36e-09 | 6.16e-05 | CATGAGCCACTGCGCC |
CRTGAGYCACCGCGCC | MEME-5 | chr22 | + | 23766730 | 23766745 | 2.36e-09 | 6.16e-05 | catgagccactgcgcc |
CRTGAGYCACCGCGCC | MEME-5 | chr16 | + | 3156927 | 3156942 | 2.56e-09 | 6.16e-05 | cgtgagccaccacgcc |
CRTGAGYCACCGCGCC | MEME-5 | chr19 | + | 39122100 | 39122115 | 2.56e-09 | 6.16e-05 | cgtgagccaccacgcc |
CRTGAGYCACCGCGCC | MEME-5 | chr20 | - | 34811972 | 34811987 | 2.76e-09 | 6.16e-05 | CATGAGCCACCGTGCC |
CRTGAGYCACCGCGCC | MEME-5 | chr5 | + | 69521115 | 69521130 | 2.76e-09 | 6.16e-05 | catgagccaccgtgcc |
CRTGAGYCACCGCGCC | MEME-5 | chr19 | - | 39033195 | 39033210 | 2.97e-09 | 6.16e-05 | CATGAGTCACCGCACC |
CRTGAGYCACCGCGCC | MEME-5 | chr1 | - | 233244432 | 233244447 | 2.97e-09 | 6.16e-05 | CATGAGTCACCGCACC |
CRTGAGYCACCGCGCC | MEME-5 | chr10 | - | 70378365 | 70378380 | 3.18e-09 | 6.33e-05 | CATGAGTCACTGCGCC |
CRTGAGYCACCGCGCC | MEME-5 | chr8 | - | 17803546 | 17803561 | 3.6e-09 | 6.33e-05 | CATGAGTCACCGTGCC |
CRTGAGYCACCGCGCC | MEME-5 | chr6 | + | 28396882 | 28396897 | 3.6e-09 | 6.33e-05 | catgagtcaccgtgcc |
CRTGAGYCACCGCGCC | MEME-5 | chr12 | + | 31078965 | 31078980 | 3.6e-09 | 6.33e-05 | catgagtcaccgtgcc |
CRTGAGYCACCGCGCC | MEME-5 | chr8 | + | 37793388 | 37793403 | 3.6e-09 | 6.33e-05 | catgagtcaccgtgcc |
CRTGAGYCACCGCGCC | MEME-5 | chr19 | - | 38518651 | 38518666 | 4.58e-09 | 7.39e-05 | CGTGAGCCACTGCACC |
CRTGAGYCACCGCGCC | MEME-5 | chr1 | + | 44796848 | 44796863 | 4.58e-09 | 7.39e-05 | catgagtcaccacgcc |
CRTGAGYCACCGCGCC | MEME-5 | chr9 | - | 75877381 | 75877396 | 4.58e-09 | 7.39e-05 | CGTGAGCCACTGCACC |
CRTGAGYCACCGCGCC | MEME-5 | chr6 | - | 43322281 | 43322296 | 5.58e-09 | 8.76e-05 | CGTGAGTCACTGCACC |
CRTGAGYCACCGCGCC | MEME-5 | chr17 | - | 46280095 | 46280110 | 6.56e-09 | 9.83e-05 | TGTGAGCCACCGCGCC |
CRTGAGYCACCGCGCC | MEME-5 | chr19 | - | 43572526 | 43572541 | 6.77e-09 | 9.83e-05 | CATGAGCCACTGCACC |
CRTGAGYCACCGCGCC | MEME-5 | chr17 | + | 39486230 | 39486245 | 6.77e-09 | 9.83e-05 | catgagccactgcacc |
CRTGAGYCACCGCGCC | MEME-5 | chrX | - | 136058572 | 136058587 | 7.38e-09 | 0.000104 | CGTGAGCCACCACACC |
CRTGAGYCACCGCGCC | MEME-5 | chr20 | - | 62794895 | 62794910 | 8.79e-09 | 0.000116 | CTTGAGCCACCGCGCC |
CRTGAGYCACCGCGCC | MEME-5 | chr7 | + | 6373912 | 6373927 | 8.79e-09 | 0.000116 | cttgagccaccgcgcc |
CRTGAGYCACCGCGCC | MEME-5 | chr7 | + | 6373912 | 6373927 | 8.79e-09 | 0.000116 | cttgagccaccgcgcc |
CRTGAGYCACCGCGCC | MEME-5 | chr1 | - | 45556912 | 45556927 | 1.14e-08 | 0.000148 | CATGAGTCACTGTGCC |
CRTGAGYCACCGCGCC | MEME-5 | chr17 | - | 76668372 | 76668387 | 1.2e-08 | 0.000152 | CGTGAGCCACAGCGCC |
CRTGAGYCACCGCGCC | MEME-5 | chr1 | - | 67400228 | 67400243 | 1.25e-08 | 0.000153 | CGTGAGTCACCATGCC |
CRTGAGYCACCGCGCC | MEME-5 | chr17 | + | 2626831 | 2626846 | 1.27e-08 | 0.000153 | cgtgagccaccccgcc |
CRTGAGYCACCGCGCC | MEME-5 | chrX | - | 73820397 | 73820412 | 1.37e-08 | 0.000159 | CATGAGCCACCATGCC |
CRTGAGYCACCGCGCC | MEME-5 | chr9 | + | 130170298 | 130170313 | 1.37e-08 | 0.000159 | catgagccaccatgcc |
CRTGAGYCACCGCGCC | MEME-5 | chr6 | - | 42674486 | 42674501 | 1.49e-08 | 0.000166 | CATGAGTCACCACACC |
CRTGAGYCACCGCGCC | MEME-5 | chr3 | + | 48926828 | 48926843 | 1.49e-08 | 0.000166 | catgagtcaccacacc |
CRTGAGYCACCGCGCC | MEME-5 | chr1 | + | 28373704 | 28373719 | 1.71e-08 | 0.000184 | catgagtcaccatgcc |
CRTGAGYCACCGCGCC | MEME-5 | chr20 | + | 46085305 | 46085320 | 1.71e-08 | 0.000184 | catgagtcaccatgcc |
CRTGAGYCACCGCGCC | MEME-5 | chr21 | - | 26841210 | 26841225 | 2.03e-08 | 0.000215 | TGTGAGCCACCGCACC |
CRTGAGYCACCGCGCC | MEME-5 | chr19 | - | 34216984 | 34216999 | 2.38e-08 | 0.000246 | TGTGAGCCACCGTGCC |
CRTGAGYCACCGCGCC | MEME-5 | chr17 | - | 46101474 | 46101489 | 2.71e-08 | 0.000275 | CCTGAGCCACCGTGCC |
CRTGAGYCACCGCGCC | MEME-5 | chr19 | - | 39918991 | 39919006 | 2.75e-08 | 0.000275 | TGTGAGTCACTGCGCC |
CRTGAGYCACCGCGCC | MEME-5 | chr11 | - | 65508225 | 65508240 | 2.87e-08 | 0.000283 | CTTGAGCCACCGTGCC |
CRTGAGYCACCGCGCC | MEME-5 | chr1 | + | 161115342 | 161115357 | 2.98e-08 | 0.000288 | cgtgagccacggcacc |
CRTGAGYCACCGCGCC | MEME-5 | chr6 | + | 43322078 | 43322093 | 3.47e-08 | 0.000331 | catgagccactacacc |
CRTGAGYCACCGCGCC | MEME-5 | chr18 | + | 62890544 | 62890559 | 3.6e-08 | 0.000337 | cgtgagccactccgcc |
CRTGAGYCACCGCGCC | MEME-5 | chr21 | - | 43857619 | 43857634 | 4.2e-08 | 0.000387 | CATGAGTCACTACACC |
CRTGAGYCACCGCGCC | MEME-5 | chr16 | + | 28087113 | 28087128 | 5.45e-08 | 0.000494 | tgtgagccactgcacc |
CRTGAGYCACCGCGCC | MEME-5 | chr16 | + | 10739004 | 10739019 | 5.61e-08 | 0.000501 | catgagtcatcacgcc |
CRTGAGYCACCGCGCC | MEME-5 | chr19 | + | 47253585 | 47253600 | 6.34e-08 | 0.000557 | catgagtcaccgcacT |
CRTGAGYCACCGCGCC | MEME-5 | chr11 | + | 14359852 | 14359867 | 6.5e-08 | 0.000563 | tgtgagtcactgcacc |
CRTGAGYCACCGCGCC | MEME-5 | chr9 | + | 131408997 | 131409012 | 6.68e-08 | 0.000564 | catgagtcactgcgct |
CRTGAGYCACCGCGCC | MEME-5 | chr20 | + | 34391031 | 34391046 | 6.7e-08 | 0.000564 | agtgagtcaccacgcc |
CRTGAGYCACCGCGCC | MEME-5 | chr18 | + | 50870348 | 50870363 | 7.38e-08 | 0.000612 | tgtgagtcactgtgcc |
CRTGAGYCACCGCGCC | MEME-5 | chr19 | + | 48961365 | 48961380 | 8.71e-08 | 0.000702 | tgtgagccaccatgcc |
CRTGAGYCACCGCGCC | MEME-5 | chr10 | - | 70378509 | 70378524 | 8.71e-08 | 0.000702 | TGTGAGCCACCATGCC |
CRTGAGYCACCGCGCC | MEME-5 | chr6 | + | 31246083 | 31246098 | 1.38e-07 | 0.00108 | catgagccactgtgct |
CRTGAGYCACCGCGCC | MEME-5 | chr17 | - | 59785396 | 59785411 | 1.38e-07 | 0.00108 | CATGAGTCATCATGCC |
CRTGAGYCACCGCGCC | MEME-5 | chr20 | + | 51961106 | 51961121 | 1.4e-07 | 0.00108 | cgtgagtcatcgcagc |
CRTGAGYCACCGCGCC | MEME-5 | chr1 | + | 28373568 | 28373583 | 1.69e-07 | 0.00129 | cgtcagccatcacgcc |
CRTGAGYCACCGCGCC | MEME-5 | chr5 | + | 76585792 | 76585807 | 2e-07 | 0.0015 | cgtgagccaccgcccc |
CRTGAGYCACCGCGCC | MEME-5 | chr17 | + | 39486544 | 39486559 | 2.16e-07 | 0.00161 | catgagtcaccatgct |
CRTGAGYCACCGCGCC | MEME-5 | chr1 | + | 16862564 | 16862579 | 2.37e-07 | 0.00172 | CGTCAGCGACCGCGGC |
CRTGAGYCACCGCGCC | MEME-5 | chr1 | - | 16545349 | 16545364 | 2.37e-07 | 0.00172 | CGTCAGCGACCGCGGC |
CRTGAGYCACCGCGCC | MEME-5 | chr19 | - | 47230201 | 47230216 | 2.75e-07 | 0.00197 | CGTGAGTCCCCGCGCC |
CRTGAGYCACCGCGCC | MEME-5 | chr11 | - | 65442605 | 65442620 | 2.95e-07 | 0.00209 | CGTGAGCCACCATACT |
CRTGAGYCACCGCGCC | MEME-5 | chr16 | - | 15591315 | 15591330 | 4.78e-07 | 0.00335 | CGTGAGCCACCGTGTC |
CRTGAGYCACCGCGCC | MEME-5 | chrX | - | 73820262 | 73820277 | 4.96e-07 | 0.00343 | CGGGAGCCACCGTGCC |
CRTGAGYCACCGCGCC | MEME-5 | chr6 | - | 42674619 | 42674634 | 7.7e-07 | 0.00514 | CATGTGCCACCACGCC |
CRTGAGYCACCGCGCC | MEME-5 | chr1 | - | 45557047 | 45557062 | 7.7e-07 | 0.00514 | CATGTGCCACCACGCC |
CRTGAGYCACCGCGCC | MEME-5 | chr1 | - | 205266450 | 205266465 | 7.7e-07 | 0.00514 | CATGAGCCGCCACGCC |
CRTGAGYCACCGCGCC | MEME-5 | chr6 | + | 28898568 | 28898583 | 8.17e-07 | 0.00539 | catgagccatcacact |
CRTGAGYCACCGCGCC | MEME-5 | chr19 | - | 34217116 | 34217131 | 1.12e-06 | 0.00729 | CGTGTGCCACCACACC |
CRTGAGYCACCGCGCC | MEME-5 | chrX | + | 23786584 | 23786599 | 1.13e-06 | 0.00729 | catgtgccaccgtacc |
CRTGAGYCACCGCGCC | MEME-5 | chr6 | + | 11095630 | 11095645 | 1.2e-06 | 0.00765 | catgagtcactgcatc |
CRTGAGYCACCGCGCC | MEME-5 | chr11 | - | 65442737 | 65442752 | 1.25e-06 | 0.00787 | CGTGCGCCACCATGCC |
CRTGAGYCACCGCGCC | MEME-5 | chr1 | + | 27875257 | 27875272 | 1.35e-06 | 0.0084 | catgagccaccattcc |
CRTGAGYCACCGCGCC | MEME-5 | chr9 | + | 131408863 | 131408878 | 1.41e-06 | 0.00873 | catgtgccaccacacc |
CRTGAGYCACCGCGCC | MEME-5 | chr12 | - | 112220654 | 112220669 | 1.53e-06 | 0.00938 | CATGTGCCACCATGCC |
CRTGAGYCACCGCGCC | MEME-5 | chr12 | + | 30706495 | 30706510 | 1.69e-06 | 0.0102 | cgtaagccactgtacc |
CRTGAGYCACCGCGCC | MEME-5 | chr19 | + | 4671077 | 4671092 | 1.77e-06 | 0.0106 | tgtgagtcatcacgct |
CRTGAGYCACCGCGCC | MEME-5 | chr19 | + | 17308812 | 17308827 | 2.05e-06 | 0.0121 | cgtccgccaccacgcc |
CRTGAGYCACCGCGCC | MEME-5 | chr19 | + | 35385952 | 35385967 | 2.1e-06 | 0.0123 | cctgagccactgcgtc |
CRTGAGYCACCGCGCC | MEME-5 | chr1 | - | 39262124 | 39262139 | 2.17e-06 | 0.0126 | TGTGAGCCATTGCACT |
CRTGAGYCACCGCGCC | MEME-5 | chr19 | + | 1068523 | 1068538 | 2.78e-06 | 0.016 | CCTGAGCCGCCACGCC |
CRTGAGYCACCGCGCC | MEME-5 | chr1 | - | 225655596 | 225655611 | 3.37e-06 | 0.0192 | CTTGAGTCATTACAGC |
CRTGAGYCACCGCGCC | MEME-5 | chr19 | - | 38518786 | 38518801 | 3.56e-06 | 0.0201 | CGTCTGCCACCACACC |
CRTGAGYCACCGCGCC | MEME-5 | chr9 | + | 131409166 | 131409181 | 3.79e-06 | 0.0212 | catgtgccacgacgcc |
CRTGAGYCACCGCGCC | MEME-5 | chr17 | - | 77289146 | 77289161 | 4.12e-06 | 0.0228 | ATTGAGCCACCACACT |
CRTGAGYCACCGCGCC | MEME-5 | chr10 | + | 24892265 | 24892280 | 4.23e-06 | 0.0231 | catgagccattgcaac |
CRTGAGYCACCGCGCC | MEME-5 | chr6 | - | 32981558 | 32981573 | 4.68e-06 | 0.0254 | AATGAGCCACAGTACT |
CRTGAGYCACCGCGCC | MEME-5 | chr5 | + | 73591880 | 73591895 | 5.33e-06 | 0.0286 | tatgaatcactgtgcc |
CRTGAGYCACCGCGCC | MEME-5 | chr1 | + | 227934949 | 227934964 | 5.58e-06 | 0.0292 | CCTGAGTCACAGCCCC |
CRTGAGYCACCGCGCC | MEME-5 | chr1 | + | 227934981 | 227934996 | 5.58e-06 | 0.0292 | CCTGAGTCACAGCCCC |
CRTGAGYCACCGCGCC | MEME-5 | chr1 | + | 227935106 | 227935121 | 5.58e-06 | 0.0292 | CCTGAGTCACAGCCCC |
CRTGAGYCACCGCGCC | MEME-5 | chr13 | + | 112213661 | 112213676 | 6.02e-06 | 0.0312 | tgtcagtcactgcccc |
CRTGAGYCACCGCGCC | MEME-5 | chr1 | + | 146036255 | 146036270 | 6.8e-06 | 0.0349 | cgtgagctaccatgct |
CRTGAGYCACCGCGCC | MEME-5 | chrX | + | 23786719 | 23786734 | 6.95e-06 | 0.0354 | ggtcagccacagcacc |
CRTGAGYCACCGCGCC | MEME-5 | chr1 | + | 44796927 | 44796942 | 7.24e-06 | 0.0366 | catgactcactgtagc |
CRTGAGYCACCGCGCC | MEME-5 | chr7 | - | 133492268 | 133492283 | 8.66e-06 | 0.0433 | AATGAGTCACCATGTC |
CRTGAGYCACCGCGCC | MEME-5 | chr6 | - | 31777354 | 31777369 | 8.86e-06 | 0.044 | CCTGAGTCACGCTGCT |
CRTGAGYCACCGCGCC | MEME-5 | chr1 | - | 225997853 | 225997868 | 9.23e-06 | 0.0454 | CTTGAGCCACTCCTCC |
CRTGAGYCACCGCGCC | MEME-5 | chr19 | + | 47253448 | 47253463 | 1.07e-05 | 0.0523 | catgagccactgtatt |
CRTGAGYCACCGCGCC | MEME-5 | chr4 | - | 37561892 | 37561907 | 1.11e-05 | 0.0539 | AATGAGTCATAGTGCT |
CRTGAGYCACCGCGCC | MEME-5 | chr1 | + | 1145467 | 1145482 | 1.24e-05 | 0.0595 | CATGACTGACCCCACC |
CRTGAGYCACCGCGCC | MEME-5 | chr17 | - | 37567425 | 37567440 | 1.52e-05 | 0.0724 | AATGAGTCAAGGCACC |
CRTGAGYCACCGCGCC | MEME-5 | chr6 | - | 30231228 | 30231243 | 1.58e-05 | 0.0746 | CATCAGTGACCACAAC |
CRTGAGYCACCGCGCC | MEME-5 | chr6 | + | 30489994 | 30490009 | 1.61e-05 | 0.0755 | GGTGAGTGACCCCGGC |
CRTGAGYCACCGCGCC | MEME-5 | chr17 | - | 33982966 | 33982981 | 1.76e-05 | 0.0819 | TGTGAGGCACCATGCT |
CRTGAGYCACCGCGCC | MEME-5 | chr16 | + | 3157207 | 3157222 | 1.86e-05 | 0.0848 | CATGAACCACGACGCT |
CRTGAGYCACCGCGCC | MEME-5 | chr1 | + | 227935043 | 227935058 | 1.86e-05 | 0.0848 | TCTGAGTCACAGCCCC |
CRTGAGYCACCGCGCC | MEME-5 | chr18 | - | 9705457 | 9705472 | 2e-05 | 0.0906 | AATGTGTCACAACGCC |
CRTGAGYCACCGCGCC | MEME-5 | chr17 | + | 38584720 | 38584735 | 2.1e-05 | 0.0945 | CATAAGCCACCAAGCC |
CRTGAGYCACCGCGCC | MEME-5 | chrX | - | 136058325 | 136058340 | 2.16e-05 | 0.096 | CATGCGCCACCAGGCC |
CRTGAGYCACCGCGCC | MEME-5 | chrX | - | 73819651 | 73819666 | 2.17e-05 | 0.096 | CATAAGTCGCCGTGCC |
CRTGAGYCACCGCGCC | MEME-5 | chr19 | + | 34218147 | 34218162 | 2.29e-05 | 0.0998 | catacgccaccacgcc |
CRTGAGYCACCGCGCC | MEME-5 | chr11 | - | 65508053 | 65508068 | 2.29e-05 | 0.0998 | CATACGCCACCACGCC |
CRTGAGYCACCGCGCC | MEME-5 | chr19 | + | 54209675 | 54209690 | 2.3e-05 | 0.0998 | ATTGAGCCACAGAGCC |
CRTGAGYCACCGCGCC | MEME-5 | chr19 | + | 39121724 | 39121739 | 2.35e-05 | 0.101 | cacgtgccaccacgcc |
CRTGAGYCACCGCGCC | MEME-5 | chr9 | + | 130170571 | 130170586 | 2.37e-05 | 0.101 | catgtgtcaccaagcc |
CRTGAGYCACCGCGCC | MEME-5 | chr6 | - | 89144472 | 89144487 | 2.42e-05 | 0.103 | TTTCAGCCACCATGGT |
CRTGAGYCACCGCGCC | MEME-5 | chr6 | - | 31959175 | 31959190 | 2.48e-05 | 0.104 | CTGGAGCCACAGCAGC |
CRTGAGYCACCGCGCC | MEME-5 | chr4 | - | 56978358 | 56978373 | 2.58e-05 | 0.108 | CAAGGGTCACCACGCC |
CRTGAGYCACCGCGCC | MEME-5 | chr16 | + | 682144 | 682159 | 2.76e-05 | 0.115 | CGTGTGCCCCTGTGCC |
CRTGAGYCACCGCGCC | MEME-5 | chr6 | - | 31246192 | 31246207 | 2.83e-05 | 0.116 | TATGAGTCACCCAAGC |
CRTGAGYCACCGCGCC | MEME-5 | chr19 | - | 40090943 | 40090958 | 2.96e-05 | 0.121 | CAGCGGCCACCGCGCC |
CRTGAGYCACCGCGCC | MEME-5 | chr6 | - | 28396654 | 28396669 | 3.02e-05 | 0.123 | ATTGTGCCACTGTACC |
CRTGAGYCACCGCGCC | MEME-5 | chr17 | - | 42118001 | 42118016 | 3.08e-05 | 0.124 | CTTCAGTCAGTGCAGC |
CRTGAGYCACCGCGCC | MEME-5 | chr20 | - | 63700025 | 63700040 | 3.3e-05 | 0.132 | CGTCAGCCATGGCTGC |
CRTGAGYCACCGCGCC | MEME-5 | chr17 | - | 62062697 | 62062712 | 3.5e-05 | 0.139 | TTTGAGTCACTTCAGC |
CRTGAGYCACCGCGCC | MEME-5 | chr19 | + | 3339259 | 3339274 | 3.58e-05 | 0.141 | catgtgccaccatccc |
CRTGAGYCACCGCGCC | MEME-5 | chr17 | + | 46279773 | 46279788 | 3.65e-05 | 0.143 | catgaaccaccattcc |
CRTGAGYCACCGCGCC | MEME-5 | chr22 | + | 49967996 | 49968011 | 3.74e-05 | 0.145 | AGTGAGCCAGGACGGC |
CRTGAGYCACCGCGCC | MEME-5 | chr1 | + | 44797005 | 44797020 | 3.77e-05 | 0.145 | catgcaccaccacacc |
CRTGAGYCACCGCGCC | MEME-5 | chr1 | - | 233244569 | 233244584 | 3.77e-05 | 0.145 | CATGCACCACCACACC |
CRTGAGYCACCGCGCC | MEME-5 | chr22 | + | 38924493 | 38924508 | 3.79e-05 | 0.145 | gctcagccacagcggc |
CRTGAGYCACCGCGCC | MEME-5 | chr19 | - | 36070588 | 36070603 | 3.87e-05 | 0.147 | AGTGAGTCACAAAGGC |
CRTGAGYCACCGCGCC | MEME-5 | chr1 | + | 28373434 | 28373449 | 3.92e-05 | 0.148 | catgtgccaacatgcc |
CRTGAGYCACCGCGCC | MEME-5 | chr5 | - | 38807791 | 38807806 | 4.05e-05 | 0.152 | TGTGAGTCATACCGGT |
CRTGAGYCACCGCGCC | MEME-5 | chr22 | - | 49967189 | 49967204 | 4.13e-05 | 0.154 | TGTCAGCCAGTCTGCC |
CRTGAGYCACCGCGCC | MEME-5 | chr5 | + | 125408934 | 125408949 | 4.41e-05 | 0.163 | CATCAGCCACTGGGCG |
CRTGAGYCACCGCGCC | MEME-5 | chr20 | - | 62795199 | 62795214 | 4.51e-05 | 0.166 | CGCGAGTCACTGCGGA |
CRTGAGYCACCGCGCC | MEME-5 | chr19 | + | 35386301 | 35386316 | 4.57e-05 | 0.167 | tgtgtgccacttcgcc |
CRTGAGYCACCGCGCC | MEME-5 | chr8 | + | 143390207 | 143390222 | 4.85e-05 | 0.174 | AGTGAGTGACTGTGGA |
CRTGAGYCACCGCGCC | MEME-5 | chr16 | - | 88809690 | 88809705 | 4.89e-05 | 0.174 | TATGAGTGACCACAGG |
CRTGAGYCACCGCGCC | MEME-5 | chr9 | + | 137197242 | 137197257 | 4.93e-05 | 0.174 | cgcccgccaccacgcc |
CRTGAGYCACCGCGCC | MEME-5 | chr19 | - | 1443728 | 1443743 | 4.93e-05 | 0.174 | CGCCCGCCACCACGCC |
CRTGAGYCACCGCGCC | MEME-5 | chr8 | - | 6266159 | 6266174 | 4.93e-05 | 0.174 | CGCCCGCCACCACGCC |
CRTGAGYCACCGCGCC | MEME-5 | chr17 | - | 42117828 | 42117843 | 4.95e-05 | 0.174 | CCTGAGCAACCTTGCC |
CRTGAGYCACCGCGCC | MEME-5 | chr16 | + | 10738869 | 10738884 | 5.07e-05 | 0.177 | catgcgcctctgtacc |
CRTGAGYCACCGCGCC | MEME-5 | chr12 | - | 90065401 | 90065416 | 5.19e-05 | 0.181 | TGTGTGTCACCTTGCC |
CRTGAGYCACCGCGCC | MEME-5 | chr6 | + | 134109651 | 134109666 | 5.29e-05 | 0.183 | catgcgccaccaAGGC |
CRTGAGYCACCGCGCC | MEME-5 | chr8 | + | 143390911 | 143390926 | 5.43e-05 | 0.186 | GGTGAGTGACCGTGCA |
CRTGAGYCACCGCGCC | MEME-5 | chr5 | + | 97838404 | 97838419 | 5.63e-05 | 0.192 | TATGAGTCATTCTAGT |
CRTGAGYCACCGCGCC | MEME-5 | chr1 | - | 155244696 | 155244711 | 5.71e-05 | 0.194 | CATGAGTGACCGTCTC |
CRTGAGYCACCGCGCC | MEME-5 | chr21 | + | 46124830 | 46124845 | 5.74e-05 | 0.194 | ACTCAGCCACCCAGCC |
CRTGAGYCACCGCGCC | MEME-5 | chr9 | + | 137517206 | 137517221 | 5.85e-05 | 0.195 | cgtcactcactccact |
CRTGAGYCACCGCGCC | MEME-5 | chr9 | + | 137518082 | 137518097 | 5.85e-05 | 0.195 | cgtcactcactccact |
CRTGAGYCACCGCGCC | MEME-5 | chr20 | + | 34390895 | 34390910 | 5.87e-05 | 0.195 | catccaccaccacgcc |
CRTGAGYCACCGCGCC | MEME-5 | chr6 | + | 30743111 | 30743126 | 5.94e-05 | 0.196 | ACTCGGCCACGGCGCC |
CRTGAGYCACCGCGCC | MEME-5 | chr18 | + | 50870214 | 50870229 | 6.01e-05 | 0.197 | cgcgtgccactccgcc |
CRTGAGYCACCGCGCC | MEME-5 | chr1 | - | 29251589 | 29251604 | 6.04e-05 | 0.197 | CCTCAGTCACAGGAGC |
CRTGAGYCACCGCGCC | MEME-5 | chrX | + | 73820480 | 73820495 | 6.15e-05 | 0.198 | agtgagccaagatggc |
CRTGAGYCACCGCGCC | MEME-5 | chr1 | + | 146036121 | 146036136 | 6.15e-05 | 0.198 | cctgcgctaccacgcc |
CRTGAGYCACCGCGCC | MEME-5 | chr17 | + | 40314784 | 40314799 | 6.36e-05 | 0.204 | GGTGAGTCACTGCCCT |
CRTGAGYCACCGCGCC | MEME-5 | chr19 | + | 48259859 | 48259874 | 6.4e-05 | 0.204 | catgagtcacgtttcc |
CRTGAGYCACCGCGCC | MEME-5 | chr1 | - | 29251499 | 29251514 | 6.54e-05 | 0.207 | CCTCAGCCAGCCTGGC |
CRTGAGYCACCGCGCC | MEME-5 | chr9 | - | 4904979 | 4904994 | 6.84e-05 | 0.209 | TGTCAGTGACAGTAGT |
CRTGAGYCACCGCGCC | MEME-5 | chr19 | - | 39833427 | 39833442 | 6.84e-05 | 0.209 | TGTCACCCACCGGGCC |
CRTGAGYCACCGCGCC | MEME-5 | chr6 | - | 129183880 | 129183895 | 6.84e-05 | 0.209 | TATGAGTCATTGTGTT |
CRTGAGYCACCGCGCC | MEME-5 | chr16 | + | 683869 | 683884 | 6.92e-05 | 0.209 | CGTGAGTCCCTGCAGG |
CRTGAGYCACCGCGCC | MEME-5 | chr8 | + | 143390053 | 143390068 | 6.96e-05 | 0.209 | CTTCAGTGACCACGGG |
CRTGAGYCACCGCGCC | MEME-5 | chr6 | - | 33409972 | 33409987 | 6.98e-05 | 0.209 | CCTCAGCCCCCGCTCC |
CRTGAGYCACCGCGCC | MEME-5 | chr20 | + | 34812204 | 34812219 | 7.05e-05 | 0.209 | attgcgccactgcact |
CRTGAGYCACCGCGCC | MEME-5 | chr11 | + | 65508147 | 65508162 | 7.05e-05 | 0.209 | attgcgccactgcact |
CRTGAGYCACCGCGCC | MEME-5 | chr1 | + | 205266192 | 205266207 | 7.05e-05 | 0.209 | attgcgccactgcact |
CRTGAGYCACCGCGCC | MEME-5 | chr16 | - | 10739073 | 10739088 | 7.05e-05 | 0.209 | ATTGTGCCACTGCACT |
CRTGAGYCACCGCGCC | MEME-5 | chr17 | - | 39486311 | 39486326 | 7.05e-05 | 0.209 | ATTGTGCCACTGCACT |
CRTGAGYCACCGCGCC | MEME-5 | chr3 | - | 48926600 | 48926615 | 7.05e-05 | 0.209 | ATTGCGCCACTGCACT |
CRTGAGYCACCGCGCC | MEME-5 | chr5 | - | 108765979 | 108765994 | 7.05e-05 | 0.209 | ATTGTGCCACTGCACT |
CRTGAGYCACCGCGCC | MEME-5 | chr10 | - | 118740332 | 118740347 | 7.3e-05 | 0.215 | TGTGAGCCACTGCAAA |
CRTGAGYCACCGCGCC | MEME-5 | chr8 | + | 37793253 | 37793268 | 7.52e-05 | 0.219 | cgcccgccaccacacc |
CRTGAGYCACCGCGCC | MEME-5 | chr10 | + | 4781009 | 4781024 | 7.58e-05 | 0.219 | TATGAGTCATCATTCT |
CRTGAGYCACCGCGCC | MEME-5 | chr1 | + | 41920830 | 41920845 | 7.63e-05 | 0.219 | catgaatcacttcagc |
CRTGAGYCACCGCGCC | MEME-5 | chr1 | + | 225700438 | 225700453 | 7.63e-05 | 0.219 | CATGAACCACAATGGT |
CRTGAGYCACCGCGCC | MEME-5 | chr2 | + | 231713734 | 231713749 | 7.63e-05 | 0.219 | AGTCAGTGATTGCCCC |
CRTGAGYCACCGCGCC | MEME-5 | chr1 | - | 941308 | 941323 | 7.76e-05 | 0.222 | CGGCAGCCACCCCAGT |
CRTGAGYCACCGCGCC | MEME-5 | chr1 | + | 1387208 | 1387223 | 7.81e-05 | 0.222 | CACCAGTCACTGCAAC |
CRTGAGYCACCGCGCC | MEME-5 | chr19 | - | 2272076 | 2272091 | 7.99e-05 | 0.224 | CATCTGTCCCTGCACC |
CRTGAGYCACCGCGCC | MEME-5 | chr1 | - | 205266098 | 205266113 | 8.01e-05 | 0.224 | CGCCTGCCACCATGCC |
CRTGAGYCACCGCGCC | MEME-5 | chr1 | - | 225997984 | 225997999 | 8.01e-05 | 0.224 | CGCCCGCCACCATGCC |
CRTGAGYCACCGCGCC | MEME-5 | chr22 | + | 19875796 | 19875811 | 8.03e-05 | 0.224 | CTGCAGCCATCCTGCC |
CRTGAGYCACCGCGCC | MEME-5 | chr7 | - | 5526291 | 5526306 | 8.13e-05 | 0.225 | CATGGCTCACTGCAGC |
CRTGAGYCACCGCGCC | MEME-5 | chr15 | + | 65513356 | 65513371 | 8.17e-05 | 0.225 | catgcaccacaacgcc |
CRTGAGYCACCGCGCC | MEME-5 | chr22 | - | 19177104 | 19177119 | 8.17e-05 | 0.225 | GGTGAGCCACTCGACC |
CRTGAGYCACCGCGCC | MEME-5 | chr19 | - | 1165363 | 1165378 | 8.37e-05 | 0.229 | TCTCAGCCACGACGTC |
CRTGAGYCACCGCGCC | MEME-5 | chr8 | - | 143937733 | 143937748 | 8.46e-05 | 0.231 | GGTGAGTGGCTGTGCC |
CRTGAGYCACCGCGCC | MEME-5 | chr1 | + | 29251367 | 29251382 | 8.52e-05 | 0.231 | CAGGGGTCACTGTGGC |
CRTGAGYCACCGCGCC | MEME-5 | chr1 | + | 144551940 | 144551955 | 8.57e-05 | 0.231 | tatGAGCTCCTGCACC |
CRTGAGYCACCGCGCC | MEME-5 | chr19 | - | 48596624 | 48596639 | 8.64e-05 | 0.232 | CCTGAGGGACGCTGCC |
CRTGAGYCACCGCGCC | MEME-5 | chr6 | - | 133248699 | 133248714 | 8.94e-05 | 0.239 | CTTGAGTCATAACCGC |
CRTGAGYCACCGCGCC | MEME-5 | chr8 | + | 37697857 | 37697872 | 9.15e-05 | 0.242 | CGTGGGCGCCTACGCC |
CRTGAGYCACCGCGCC | MEME-5 | chr17 | + | 48499610 | 48499625 | 9.15e-05 | 0.242 | cctgtgccaccacatc |
CRTGAGYCACCGCGCC | MEME-5 | chr1 | + | 43604537 | 43604552 | 9.18e-05 | 0.242 | CATGCTCCACCACGCT |
CRTGAGYCACCGCGCC | MEME-5 | chr1 | + | 155178849 | 155178864 | 9.51e-05 | 0.25 | AGTCAGCGGCCCTGCC |
CRTGAGYCACCGCGCC | MEME-5 | chr1 | + | 16627404 | 16627419 | 9.91e-05 | 0.259 | CCTGAGCCACAGGGCA |
CRTGAGYCACCGCGCC | MEME-5 | chr1 | + | 227935138 | 227935153 | 9.99e-05 | 0.26 | CCTGAGTCACATCCCC |
Command line:
/software/meme/4.12.0/bin/fimo --parse-genomic-coord --verbosity 1 --oc /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/BCL11A.IDR0.05.filt.narrowPeak.outsidePolsteinDNase.summitPlusMinus250bp.MemeChipResults/fimo_out_5 --bgfile /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/BCL11A.IDR0.05.filt.narrowPeak.outsidePolsteinDNase.summitPlusMinus250bp.MemeChipResults/background --motif CRTGAGYCACCGCGCC /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/BCL11A.IDR0.05.filt.narrowPeak.outsidePolsteinDNase.summitPlusMinus250bp.MemeChipResults/meme_out/meme.xml /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/BCL11A.IDR0.05.filt.narrowPeak.outsidePolsteinDNase.summitPlusMinus250bp.MemeChipResults/BCL11A.IDR0.05.filt.narrowPeak.outsidePolsteinDNase.summitPlusMinus250bp.fa
Settings:
output_directory = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/BCL11A.IDR0.05.filt.narrowPeak.outsidePolsteinDNase.summitPlusMinus250bp.MemeChipResults/fimo_out_5 | MEME file name = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/BCL11A.IDR0.05.filt.narrowPeak.outsidePolsteinDNase.summitPlusMinus250bp.MemeChipResults/meme_out/meme.xml | sequence file name = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/BCL11A.IDR0.05.filt.narrowPeak.outsidePolsteinDNase.summitPlusMinus250bp.MemeChipResults/BCL11A.IDR0.05.filt.narrowPeak.outsidePolsteinDNase.summitPlusMinus250bp.fa |
background file name = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/BCL11A.IDR0.05.filt.narrowPeak.outsidePolsteinDNase.summitPlusMinus250bp.MemeChipResults/background | alphabet = DNA | max stored scores = 100000 |
allow clobber = true | compute q-values = true | parse genomic coord. = true |
text only = false | scan both strands = true | max strand = false |
threshold type = p-value | output theshold = 0.0001 | pseudocount = 0.1 |
alpha = 1 | verbosity = 1 |
This information can be useful in the event you wish to report a problem with the FIMO software.