state (Emission order) Genome % CpGIsland.hg38.bed.gz RefSeqExon.hg38.bed.gz RefSeqGene.hg38.bed.gz RefSeqTES.hg38.bed.gz RefSeqTSS.hg38.bed.gz RefSeqTSS2kb.hg38.bed.gz 1 0.06768 2.23551 0.98256 1.27236 0.97056 2.25540 2.70136 2 1.94382 0.20892 0.67603 1.56349 0.95325 0.97997 1.68659 3 0.57868 0.14448 1.68974 2.25966 1.42178 0.67523 2.03967 4 9.02409 0.67181 1.04428 1.43530 1.26417 0.66845 1.50195 5 0.43206 1.19953 1.37794 1.42762 2.04830 1.98539 3.21806 6 0.13398 16.60894 4.00560 1.44397 4.38646 9.68368 19.08286 7 0.01746 4.24751 10.29588 2.20064 15.64195 10.14093 16.22797 8 0.51454 80.42830 10.88930 1.73512 2.83525 69.19509 25.98193 9 0.23112 51.64484 6.25739 1.29692 2.39321 43.60067 19.44431 10 0.11195 28.40025 4.81839 1.95787 2.68663 36.81367 24.67826 11 0.04059 62.96428 9.04194 1.49703 1.10731 43.24919 21.48499 12 0.14663 5.14518 2.79988 1.94754 2.42843 4.89263 19.95091 13 0.02735 0.61971 5.62389 2.28644 6.44511 2.23191 15.20815 14 0.14288 0.58930 5.00022 2.21507 7.23453 1.83748 3.25937 15 5.76963 0.67048 2.91284 2.14187 2.60578 0.43650 0.87989 16 2.77919 0.22529 3.92115 2.27029 3.25274 0.32183 0.61554 17 1.23422 0.06640 4.24136 2.31535 3.28831 0.40316 0.61078 18 0.19516 0.03365 4.20314 2.08512 3.02897 0.21898 0.57454 19 1.52056 0.15288 0.64795 0.92221 0.70251 0.22084 0.44696 20 32.84004 0.43629 0.77115 0.97533 0.86645 0.49053 0.72222 21 17.85039 0.46656 0.52626 0.46078 0.66485 0.49355 0.58899 22 0.74787 0.07097 0.52706 0.68519 0.53158 0.18777 0.30844 23 13.22608 0.14416 0.28172 0.61567 0.37560 0.27582 0.34168 24 2.33307 0.17401 0.60475 0.77660 0.52009 0.49459 0.70826 25 8.09098 0.09044 0.33103 0.68875 0.43111 0.30146 0.40828 Base 100 0.70560 2.46204 41.96879 0.00094 0.00106 3.43532