state (Emission order) Genome % CpGIsland.hg38.bed.gz RefSeqExon.hg38.bed.gz RefSeqGene.hg38.bed.gz RefSeqTES.hg38.bed.gz RefSeqTSS.hg38.bed.gz RefSeqTSS2kb.hg38.bed.gz 1 0.05839 43.62878 6.62790 1.45607 1.48016 28.91219 15.85863 2 5.73324 0.10619 0.47897 0.74321 0.48961 0.37911 0.52711 3 16.11643 0.11966 0.28365 0.63181 0.37538 0.26670 0.34563 4 36.21912 0.44649 0.61178 0.65533 0.73102 0.49972 0.64509 5 1.90418 0.14994 0.57912 0.82229 0.64812 0.21322 0.39730 6 27.42213 0.52642 0.99750 1.25938 1.11870 0.52678 0.98022 7 0.22610 0.02904 4.06559 2.08488 2.84387 0.25653 0.59837 8 5.49288 0.51948 3.29416 2.20953 2.82266 0.39625 0.82015 9 2.42503 0.09364 4.14139 2.29974 3.33862 0.33988 0.55894 10 0.15535 0.51906 5.05108 2.22601 6.94296 1.63100 3.19117 11 0.54351 0.12463 1.63477 2.26208 1.29753 0.65714 1.92234 12 2.07797 0.24968 0.68991 1.56544 0.94661 1.00925 1.76148 13 0.44452 1.23722 1.44502 1.42616 2.21642 2.02588 3.27163 14 0.13834 16.58251 4.02870 1.45712 4.37300 9.62087 19.03384 15 0.52120 80.32447 10.86220 1.73179 2.85210 69.06680 25.93485 16 0.33037 44.34961 5.83685 1.51083 2.40670 41.99662 21.32391 17 0.15412 5.44346 2.83065 1.95237 2.46728 5.14973 19.66998 18 0.03713 1.85188 7.86264 2.25593 11.35758 6.08336 16.23749 Base 100 0.70560 2.46204 41.96879 0.00094 0.00106 3.43532