state (Emission order) Genome % CpGIsland.hg38.bed.gz RefSeqExon.hg38.bed.gz RefSeqGene.hg38.bed.gz RefSeqTES.hg38.bed.gz RefSeqTSS.hg38.bed.gz RefSeqTSS2kb.hg38.bed.gz 1 1.87813 0.32788 0.72483 1.39477 0.97554 1.09551 1.83970 2 0.96646 0.09537 1.18777 2.19936 1.14462 0.65068 1.64514 3 0.44276 1.19792 1.48776 1.42948 2.34235 2.04084 3.24386 4 0.14839 15.93186 4.39376 1.50063 5.19503 10.16239 18.89636 5 0.51703 80.22160 10.95683 1.73983 2.92191 69.15158 25.98863 6 0.34865 43.73510 5.77043 1.50333 2.40940 40.65254 21.33123 7 0.16471 3.98837 3.27415 2.05189 3.23214 4.74455 19.17504 8 0.05710 44.38773 6.72268 1.45713 1.39249 29.56474 16.06494 9 5.89424 0.10666 0.47686 0.74307 0.49325 0.37911 0.52604 10 16.38439 0.11816 0.28009 0.62677 0.37578 0.26625 0.34135 11 1.97934 0.14737 0.65343 0.86723 0.70909 0.21283 0.41007 12 60.27185 0.47328 0.73225 0.86694 0.85610 0.50917 0.77460 13 0.31265 0.19548 4.66518 2.18798 4.93139 0.85922 1.87365 14 7.61960 0.61872 2.75815 2.14398 2.47672 0.46354 0.95838 15 3.01470 0.10738 4.07276 2.29430 3.25435 0.33112 0.55890 Base 100 0.70560 2.46204 41.96879 0.00094 0.00106 3.43532