# DREME 4.12.0 # command: dreme -v 1 -oc /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeK562eGFPComparisons/ZNF24.IDR0.05.filt.narrowPeak.summitPlusMinus250bp.MemeChipResultsDefaultMax/dreme_out -png -dna -p /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeK562eGFPComparisons/ZNF24.IDR0.05.filt.narrowPeak.summitPlusMinus250bp.MemeChipResultsDefaultMax/seqs-centered -n /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeK562eGFPComparisons/ZNF24.IDR0.05.filt.narrowPeak.summitPlusMinus250bp.MemeChipResultsDefaultMax/seqs-shuffled # positives: 14436 from /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeK562eGFPComparisons/ZNF24.IDR0.05.filt.narrowPeak.summitPlusMinus250bp.MemeChipResultsDefaultMax/seqs-centered (Wed Nov 22 12:43:44 PST 2017) # negatives: 14436 from /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeK562eGFPComparisons/ZNF24.IDR0.05.filt.narrowPeak.summitPlusMinus250bp.MemeChipResultsDefaultMax/seqs-shuffled (Wed Nov 22 12:43:44 PST 2017) # host: surya # when: Wed Nov 22 12:59:49 PST 2017 MEME version 4.12.0 ALPHABET "DNA" DNA-LIKE A "Adenine" CC0000 ~ T "Thymine" 008000 C "Cytosine" 0000CC ~ G "Guanine" FFB300 N "Any base" = ACGT X = ACGT . = ACGT V "Not T" = ACG H "Not G" = ACT D "Not C" = AGT B "Not A" = CGT M "Amino" = AC R "Purine" = AG W "Weak" = AT S "Strong" = CG Y "Pyrimidine" = CT K "Keto" = GT U = T END ALPHABET strands: + - Background letter frequencies (from dataset): A 0.264 C 0.236 G 0.237 T 0.264 MOTIF AATGARTK DREME-1 # Word RC Word Pos Neg P-value E-value # BEST AATGARTK MAYTCATT 4001 638 9.3e-694 4.2e-689 # AATGAATG CATTCATT 3048 349 1.1e-598 4.8e-594 # AATGAGTG CACTCATT 816 127 8.6e-128 3.9e-123 # AATGAATT AATTCATT 316 114 1.2e-023 5.4e-019 # AATGAGTT AACTCATT 102 58 3.0e-004 1.4e+001 letter-probability matrix: alength= 4 w= 8 nsites= 7267 E= 4.2e-689 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.846016 0.000000 0.153984 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.946746 0.053254 MOTIF AGATAAV DREME-2 # Word RC Word Pos Neg P-value E-value # BEST AGATAAV BTTATCT 1332 513 2.3e-089 1.0e-084 # AGATAAG CTTATCT 694 187 1.7e-071 7.7e-067 # AGATAAC GTTATCT 304 113 6.9e-022 3.1e-017 # AGATAAA TTTATCT 401 222 2.0e-013 8.8e-009 letter-probability matrix: alength= 4 w= 7 nsites= 1445 E= 1.0e-084 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.281661 0.212457 0.505882 0.000000 MOTIF AASDAATG DREME-3 # Word RC Word Pos Neg P-value E-value # BEST AASDAATG CATTHSTT 1222 428 9.9e-094 4.4e-089 # AACAAATG CATTTGTT 302 91 3.5e-028 1.6e-023 # AACGAATG CATTCGTT 147 17 1.9e-027 8.6e-023 # AAGAAATG CATTTCTT 412 162 7.0e-027 3.1e-022 # AAGGAATG CATTCCTT 265 99 4.0e-019 1.8e-014 # AACTAATG CATTAGTT 80 38 6.7e-005 3.0e+000 # AAGTAATG CATTACTT 64 33 1.1e-003 4.7e+001 letter-probability matrix: alength= 4 w= 8 nsites= 1308 E= 4.4e-089 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.417431 0.582569 0.000000 0.557339 0.000000 0.332569 0.110092 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 MOTIF AGGCHGR DREME-4 # Word RC Word Pos Neg P-value E-value # BEST AGGCHGR YCDGCCT 2464 1387 1.3e-078 5.8e-074 # AGGCTGG CCAGCCT 708 320 8.2e-036 3.6e-031 # AGGCTGA TCAGCCT 693 319 7.4e-034 3.3e-029 # AGGCAGG CCTGCCT 678 338 4.2e-028 1.9e-023 # AGGCCGA TCGGCCT 173 75 1.8e-010 8.2e-006 # AGGCAGA TCTGCCT 512 337 5.9e-010 2.7e-005 # AGGCCGG CCGGCCT 133 93 4.5e-003 2.0e+002 letter-probability matrix: alength= 4 w= 7 nsites= 2826 E= 5.8e-074 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.415428 0.104388 0.000000 0.480184 0.000000 0.000000 1.000000 0.000000 0.468153 0.000000 0.531847 0.000000 MOTIF CCATYTTR DREME-5 # Word RC Word Pos Neg P-value E-value # BEST CCATYTTR YAARATGG 759 225 9.2e-071 4.1e-066 # CCATCTTG CAAGATGG 336 77 1.8e-040 8.0e-036 # CCATTTTA TAAAATGG 189 46 3.2e-022 1.4e-017 # CCATTTTG CAAAATGG 162 74 4.4e-009 2.0e-004 # CCATCTTA TAAGATGG 84 30 2.0e-007 9.0e-003 letter-probability matrix: alength= 4 w= 8 nsites= 786 E= 4.1e-066 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.544529 0.000000 0.455471 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.354962 0.000000 0.645038 0.000000 MOTIF ARTRAAT DREME-6 # Word RC Word Pos Neg P-value E-value # BEST ARTRAAT ATTYAYT 1539 753 5.6e-067 2.5e-062 # AATAAAT ATTTATT 555 221 4.0e-035 1.8e-030 # AGTGAAT ATTCACT 621 276 1.7e-032 7.3e-028 # AATGAAT ATTCATT 335 170 5.5e-014 2.5e-009 # AGTAAAT ATTTACT 255 117 2.4e-013 1.1e-008 letter-probability matrix: alength= 4 w= 7 nsites= 1810 E= 2.5e-062 1.000000 0.000000 0.000000 0.000000 0.476796 0.000000 0.523204 0.000000 0.000000 0.000000 0.000000 1.000000 0.452486 0.000000 0.547514 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 MOTIF CTGTAAYC DREME-7 # Word RC Word Pos Neg P-value E-value # BEST CTGTAAYC GRTTACAG 348 38 7.5e-065 3.3e-060 # CTGTAATC GATTACAG 302 23 4.2e-064 1.9e-059 # CTGTAACC GGTTACAG 47 15 2.8e-005 1.3e+000 letter-probability matrix: alength= 4 w= 8 nsites= 349 E= 3.3e-060 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.134670 0.000000 0.865330 0.000000 1.000000 0.000000 0.000000 MOTIF RTGACTCA DREME-8 # Word RC Word Pos Neg P-value E-value # BEST RTGACTCA TGAGTCAY 446 105 3.5e-052 1.5e-047 # ATGACTCA TGAGTCAT 262 50 1.8e-036 7.9e-032 # GTGACTCA TGAGTCAC 188 55 1.2e-018 5.4e-014 letter-probability matrix: alength= 4 w= 8 nsites= 464 E= 1.5e-047 0.584052 0.000000 0.415948 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 MOTIF CYTCCY DREME-9 # Word RC Word Pos Neg P-value E-value # BEST CYTCCY RGGARG 5203 4046 1.5e-048 6.7e-044 # CTTCCT AGGAAG 1967 1275 1.6e-038 7.2e-034 # CCTCCC GGGAGG 1806 1301 4.4e-022 1.9e-017 # CTTCCC GGGAAG 1513 1208 4.4e-010 2.0e-005 # CCTCCT AGGAGG 1629 1367 2.3e-007 1.0e-002 letter-probability matrix: alength= 4 w= 6 nsites= 7644 E= 6.7e-044 0.000000 1.000000 0.000000 0.000000 0.000000 0.467949 0.000000 0.532051 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.460884 0.000000 0.539116 MOTIF GCCACYGC DREME-10 # Word RC Word Pos Neg P-value E-value # BEST GCCACYGC GCRGTGGC 310 70 6.9e-038 3.0e-033 # GCCACTGC GCAGTGGC 212 58 2.9e-022 1.3e-017 # GCCACCGC GCGGTGGC 98 12 2.7e-018 1.2e-013 letter-probability matrix: alength= 4 w= 8 nsites= 312 E= 3.0e-033 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.314103 0.000000 0.685897 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 MOTIF CCASSC DREME-11 # Word RC Word Pos Neg P-value E-value # BEST CCASSC GSSTGG 3240 2436 5.4e-033 2.4e-028 # CCAGGC GCCTGG 1246 858 7.8e-019 3.4e-014 # CCACGC GCGTGG 409 225 6.8e-014 3.0e-009 # CCAGCC GGCTGG 930 727 1.6e-007 6.8e-003 # CCACCC GGGTGG 1063 908 1.6e-004 7.1e+000 letter-probability matrix: alength= 4 w= 6 nsites= 3808 E= 2.4e-028 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.412815 0.587185 0.000000 0.000000 0.555410 0.444590 0.000000 0.000000 1.000000 0.000000 0.000000 MOTIF RCCTACTR DREME-12 # Word RC Word Pos Neg P-value E-value # BEST RCCTACTR YAGTAGGY 300 77 7.1e-033 3.1e-028 # ACCTACTG CAGTAGGT 132 27 3.4e-018 1.5e-013 # ACCTACTA TAGTAGGT 87 19 6.5e-012 2.8e-007 # GCCTACTA TAGTAGGC 37 11 1.1e-004 4.8e+000 # GCCTACTG CAGTAGGC 46 20 9.2e-004 4.0e+001 letter-probability matrix: alength= 4 w= 8 nsites= 305 E= 3.1e-028 0.727869 0.000000 0.272131 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.409836 0.000000 0.590164 0.000000 MOTIF AGTRAST DREME-13 # Word RC Word Pos Neg P-value E-value # BEST AGTRAST ASTYACT 1138 667 7.7e-031 3.3e-026 # AGTGACT AGTCACT 371 201 3.3e-013 1.4e-008 # AGTGAGT ACTCACT 434 262 2.1e-011 9.3e-007 # AGTAACT AGTTACT 196 102 2.4e-008 1.0e-003 # AGTAAGT ACTTACT 190 112 3.8e-006 1.6e-001 letter-probability matrix: alength= 4 w= 7 nsites= 1303 E= 3.3e-026 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.299309 0.000000 0.700691 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.442057 0.557943 0.000000 0.000000 0.000000 0.000000 1.000000 MOTIF AAAGTGCT DREME-14 # Word RC Word Pos Neg P-value E-value # BEST AAAGTGCT AGCACTTT 229 50 4.4e-029 1.9e-024 # AAAGTGCT AGCACTTT 229 50 4.4e-029 1.9e-024 letter-probability matrix: alength= 4 w= 8 nsites= 230 E= 1.9e-024 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 MOTIF GAGACRGR DREME-15 # Word RC Word Pos Neg P-value E-value # BEST GAGACRGR YCYGTCTC 510 212 3.4e-030 1.5e-025 # GAGACGGA TCCGTCTC 74 13 7.5e-012 3.2e-007 # GAGACAGA TCTGTCTC 224 112 4.0e-010 1.7e-005 # GAGACGGG CCCGTCTC 77 23 2.6e-008 1.1e-003 # GAGACAGG CCTGTCTC 143 70 2.9e-007 1.3e-002 letter-probability matrix: alength= 4 w= 8 nsites= 551 E= 1.5e-025 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.725953 0.000000 0.274047 0.000000 0.000000 0.000000 1.000000 0.000000 0.598911 0.000000 0.401089 0.000000 MOTIF CAGAGCRA DREME-16 # Word RC Word Pos Neg P-value E-value # BEST CAGAGCRA TYGCTCTG 322 109 3.8e-026 1.7e-021 # CAGAGCAA TTGCTCTG 245 95 7.0e-017 3.0e-012 # CAGAGCGA TCGCTCTG 77 14 4.9e-012 2.1e-007 letter-probability matrix: alength= 4 w= 8 nsites= 323 E= 1.7e-021 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.761610 0.000000 0.238390 0.000000 1.000000 0.000000 0.000000 0.000000 MOTIF GTAAAATR DREME-17 # Word RC Word Pos Neg P-value E-value # BEST GTAAAATR YATTTTAC 216 54 1.3e-024 5.5e-020 # GTAAAATA TATTTTAC 102 20 8.7e-015 3.8e-010 # GTAAAATG CATTTTAC 115 34 7.8e-012 3.4e-007 letter-probability matrix: alength= 4 w= 8 nsites= 217 E= 5.5e-020 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.470046 0.000000 0.529954 0.000000 MOTIF CTTATCAS DREME-18 # Word RC Word Pos Neg P-value E-value # BEST CTTATCAS STGATAAG 233 67 3.7e-023 1.6e-018 # CTTATCAG CTGATAAG 145 39 6.2e-016 2.7e-011 # CTTATCAC GTGATAAG 88 28 9.8e-009 4.2e-004 letter-probability matrix: alength= 4 w= 8 nsites= 236 E= 1.6e-018 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.385593 0.614407 0.000000 MOTIF AMAAATAC DREME-19 # Word RC Word Pos Neg P-value E-value # BEST AMAAATAC GTATTTKT 215 60 3.9e-022 1.7e-017 # AAAAATAC GTATTTTT 150 40 1.5e-016 6.3e-012 # ACAAATAC GTATTTGT 65 20 5.0e-007 2.2e-002 letter-probability matrix: alength= 4 w= 8 nsites= 217 E= 1.7e-017 1.000000 0.000000 0.000000 0.000000 0.700461 0.299539 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 MOTIF CCASCTAC DREME-20 # Word RC Word Pos Neg P-value E-value # BEST CCASCTAC GTAGSTGG 193 48 3.0e-022 1.3e-017 # CCAGCTAC GTAGCTGG 156 31 1.1e-021 4.9e-017 # CCACCTAC GTAGGTGG 37 17 4.5e-003 2.0e+002 letter-probability matrix: alength= 4 w= 8 nsites= 195 E= 1.3e-017 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.189744 0.810256 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 MOTIF CGGMTCAC DREME-21 # Word RC Word Pos Neg P-value E-value # BEST CGGMTCAC GTGAKCCG 135 22 2.0e-021 8.8e-017 # CGGATCAC GTGATCCG 61 5 1.2e-013 5.4e-009 # CGGCTCAC GTGAGCCG 74 17 5.6e-010 2.4e-005 letter-probability matrix: alength= 4 w= 8 nsites= 136 E= 8.8e-017 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.455882 0.544118 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 MOTIF CACGTR DREME-22 # Word RC Word Pos Neg P-value E-value # BEST CACGTR YACGTG 439 209 1.9e-020 8.2e-016 # CACGTG CACGTG 287 110 7.3e-020 3.2e-015 # CACGTA TACGTG 157 102 3.6e-004 1.6e+001 letter-probability matrix: alength= 4 w= 6 nsites= 462 E= 8.2e-016 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.346320 0.000000 0.653680 0.000000 MOTIF CWGWGGC DREME-23 # Word RC Word Pos Neg P-value E-value # BEST CWGWGGC GCCWCWG 1195 786 7.9e-022 3.4e-017 # CAGAGGC GCCTCTG 416 247 1.6e-011 7.0e-007 # CAGTGGC GCCACTG 231 142 2.0e-006 8.8e-002 # CTGAGGC GCCTCAG 306 218 6.1e-005 2.6e+000 # CTGTGGC GCCACAG 285 211 4.6e-004 2.0e+001 letter-probability matrix: alength= 4 w= 7 nsites= 1251 E= 3.4e-017 0.000000 1.000000 0.000000 0.000000 0.522782 0.000000 0.000000 0.477218 0.000000 0.000000 1.000000 0.000000 0.585931 0.000000 0.000000 0.414069 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 MOTIF AGGTCAGG DREME-24 # Word RC Word Pos Neg P-value E-value # BEST AGGTCAGG CCTGACCT 185 54 2.1e-018 9.0e-014 # AGGTCAGG CCTGACCT 185 54 2.1e-018 9.0e-014 letter-probability matrix: alength= 4 w= 8 nsites= 186 E= 9.0e-014 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 MOTIF AAYGAACG DREME-25 # Word RC Word Pos Neg P-value E-value # BEST AAYGAACG CGTTCRTT 112 18 3.8e-018 1.7e-013 # AATGAACG CGTTCATT 88 17 4.6e-013 2.0e-008 # AACGAACG CGTTCGTT 30 1 1.5e-008 6.3e-004 letter-probability matrix: alength= 4 w= 8 nsites= 119 E= 1.7e-013 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.252101 0.000000 0.747899 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 MOTIF ATCRCTTG DREME-26 # Word RC Word Pos Neg P-value E-value # BEST ATCRCTTG CAAGYGAT 203 71 2.5e-016 1.1e-011 # ATCGCTTG CAAGCGAT 80 10 4.8e-015 2.1e-010 # ATCACTTG CAAGTGAT 123 61 2.7e-006 1.1e-001 letter-probability matrix: alength= 4 w= 8 nsites= 203 E= 1.1e-011 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.605911 0.000000 0.394089 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 MOTIF AMACAS DREME-27 # Word RC Word Pos Neg P-value E-value # BEST AMACAS STGTKT 3584 3024 2.4e-015 1.0e-010 # ACACAG CTGTGT 1292 992 3.3e-011 1.4e-006 # AAACAC GTGTTT 899 707 4.6e-007 2.0e-002 # AAACAG CTGTTT 1070 919 2.4e-004 1.1e+001 # ACACAC GTGTGT 1113 973 7.9e-004 3.4e+001 letter-probability matrix: alength= 4 w= 6 nsites= 5358 E= 1.0e-010 1.000000 0.000000 0.000000 0.000000 0.366368 0.633632 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.549645 0.450355 0.000000 MOTIF TCACTGYA DREME-28 # Word RC Word Pos Neg P-value E-value # BEST TCACTGYA TRCAGTGA 221 92 7.9e-014 3.4e-009 # TCACTGCA TGCAGTGA 178 72 6.4e-012 2.7e-007 # TCACTGTA TACAGTGA 44 20 1.8e-003 7.8e+001 letter-probability matrix: alength= 4 w= 8 nsites= 225 E= 3.4e-009 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.804444 0.000000 0.195556 1.000000 0.000000 0.000000 0.000000 MOTIF AAAATTAG DREME-29 # Word RC Word Pos Neg P-value E-value # BEST AAAATTAG CTAATTTT 139 42 1.1e-013 4.5e-009 # AAAATTAG CTAATTTT 139 42 1.1e-013 4.5e-009 letter-probability matrix: alength= 4 w= 8 nsites= 139 E= 4.5e-009 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 MOTIF ATKCAGCC DREME-30 # Word RC Word Pos Neg P-value E-value # BEST ATKCAGCC GGCTGMAT 206 84 2.1e-013 9.0e-009 # ATGCAGCC GGCTGCAT 149 56 2.7e-011 1.1e-006 # ATTCAGCC GGCTGAAT 57 28 1.1e-003 4.6e+001 letter-probability matrix: alength= 4 w= 8 nsites= 206 E= 9.0e-009 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.723301 0.276699 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 MOTIF GCGTGMGC DREME-31 # Word RC Word Pos Neg P-value E-value # BEST GCGTGMGC GCKCACGC 82 15 1.1e-012 4.7e-008 # GCGTGAGC GCTCACGC 62 10 1.3e-010 5.5e-006 # GCGTGCGC GCGCACGC 20 5 2.0e-003 8.7e+001 letter-probability matrix: alength= 4 w= 8 nsites= 82 E= 4.7e-008 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.756098 0.243902 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 MOTIF AGCHCCTA DREME-32 # Word RC Word Pos Neg P-value E-value # BEST AGCHCCTA TAGGDGCT 193 87 8.8e-011 3.8e-006 # AGCACCTA TAGGTGCT 76 31 7.7e-006 3.3e-001 # AGCCCCTA TAGGGGCT 54 23 2.6e-004 1.1e+001 # AGCTCCTA TAGGAGCT 65 33 7.9e-004 3.4e+001 letter-probability matrix: alength= 4 w= 8 nsites= 194 E= 3.8e-006 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.386598 0.278351 0.000000 0.335052 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 MOTIF CCATGTKG DREME-33 # Word RC Word Pos Neg P-value E-value # BEST CCATGTKG CMACATGG 211 100 1.2e-010 5.0e-006 # CCATGTTG CAACATGG 140 62 1.9e-008 8.0e-004 # CCATGTGG CCACATGG 72 38 7.5e-004 3.2e+001 letter-probability matrix: alength= 4 w= 8 nsites= 214 E= 5.0e-006 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.336449 0.663551 0.000000 0.000000 1.000000 0.000000 MOTIF CCYGGS DREME-34 # Word RC Word Pos Neg P-value E-value # BEST CCYGGS SCCRGG 1975 1623 1.9e-010 8.3e-006 # CCCGGC GCCGGG 350 255 5.5e-005 2.3e+000 # CCTGGG CCCAGG 813 672 9.5e-005 4.1e+000 # CCCGGG CCCGGG 193 137 1.1e-003 4.9e+001 # CCTGGC GCCAGG 775 673 3.2e-003 1.4e+002 letter-probability matrix: alength= 4 w= 6 nsites= 2190 E= 8.3e-006 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.256621 0.000000 0.743379 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.529224 0.470776 0.000000 MOTIF ARTAAACR DREME-35 # Word RC Word Pos Neg P-value E-value # BEST ARTAAACR YGTTTAYT 157 65 2.5e-010 1.1e-005 # AGTAAACG CGTTTACT 15 1 2.6e-004 1.1e+001 # AATAAACG CGTTTATT 23 5 4.5e-004 1.9e+001 # AATAAACA TGTTTATT 71 37 6.8e-004 2.9e+001 # AGTAAACA TGTTTACT 49 22 9.0e-004 3.8e+001 letter-probability matrix: alength= 4 w= 8 nsites= 158 E= 1.1e-005 1.000000 0.000000 0.000000 0.000000 0.594937 0.000000 0.405063 0.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.759494 0.000000 0.240506 0.000000 MOTIF AGWTCGAG DREME-36 # Word RC Word Pos Neg P-value E-value # BEST AGWTCGAG CTCGAWCT 93 28 1.1e-009 4.8e-005 # AGTTCGAG CTCGAACT 65 18 1.0e-007 4.3e-003 # AGATCGAG CTCGATCT 28 10 2.5e-003 1.1e+002 letter-probability matrix: alength= 4 w= 8 nsites= 93 E= 4.8e-005 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.301075 0.000000 0.000000 0.698925 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 MOTIF AACAAAYA DREME-37 # Word RC Word Pos Neg P-value E-value # BEST AACAAAYA TRTTTGTT 187 92 5.7e-009 2.4e-004 # AACAAACA TGTTTGTT 103 50 1.0e-005 4.4e-001 # AACAAATA TATTTGTT 87 42 4.4e-005 1.9e+000 letter-probability matrix: alength= 4 w= 8 nsites= 204 E= 2.4e-004 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.573529 0.000000 0.426471 1.000000 0.000000 0.000000 0.000000 MOTIF AGKCATTC DREME-38 # Word RC Word Pos Neg P-value E-value # BEST AGKCATTC GAATGMCT 175 84 7.0e-009 3.0e-004 # AGGCATTC GAATGCCT 73 27 2.3e-006 9.6e-002 # AGTCATTC GAATGACT 103 57 1.7e-004 7.0e+000 letter-probability matrix: alength= 4 w= 8 nsites= 180 E= 3.0e-004 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.405556 0.594444 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 MOTIF ATCTCTAM DREME-39 # Word RC Word Pos Neg P-value E-value # BEST ATCTCTAM KTAGAGAT 124 52 2.6e-008 1.1e-003 # ATCTCTAC GTAGAGAT 75 26 5.3e-007 2.3e-002 # ATCTCTAA TTAGAGAT 50 26 3.9e-003 1.7e+002 letter-probability matrix: alength= 4 w= 8 nsites= 125 E= 1.1e-003 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 0.400000 0.600000 0.000000 0.000000 MOTIF ATTAWYTC DREME-40 # Word RC Word Pos Neg P-value E-value # BEST ATTAWYTC GARWTAAT 287 153 6.1e-011 2.6e-006 # ATTAATTC GAATTAAT 90 46 9.7e-005 4.1e+000 # ATTAACTC GAGTTAAT 49 22 9.0e-004 3.8e+001 # ATTATTTC GAAATAAT 87 51 1.3e-003 5.7e+001 # ATTATCTC GAGATAAT 63 35 3.0e-003 1.3e+002 letter-probability matrix: alength= 4 w= 8 nsites= 298 E= 2.6e-006 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 0.473154 0.000000 0.000000 0.526846 0.000000 0.375839 0.000000 0.624161 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 MOTIF ASTGAGAC DREME-41 # Word RC Word Pos Neg P-value E-value # BEST ASTGAGAC GTCTCAST 167 82 3.4e-008 1.4e-003 # AGTGAGAC GTCTCACT 93 36 2.6e-007 1.1e-002 # ACTGAGAC GTCTCAGT 74 46 6.6e-003 2.8e+002 letter-probability matrix: alength= 4 w= 8 nsites= 167 E= 1.4e-003 1.000000 0.000000 0.000000 0.000000 0.000000 0.443114 0.556886 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 MOTIF ATCCATCC DREME-42 # Word RC Word Pos Neg P-value E-value # BEST ATCCATCC GGATGGAT 170 86 7.4e-008 3.1e-003 # ATCCATCC GGATGGAT 170 86 7.4e-008 3.1e-003 letter-probability matrix: alength= 4 w= 8 nsites= 303 E= 3.1e-003 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 MOTIF GTTCAAAY DREME-43 # Word RC Word Pos Neg P-value E-value # BEST GTTCAAAY RTTTGAAC 153 76 1.8e-007 7.7e-003 # GTTCAAAT ATTTGAAC 84 42 1.1e-004 4.7e+000 # GTTCAAAC GTTTGAAC 69 34 3.6e-004 1.5e+001 letter-probability matrix: alength= 4 w= 8 nsites= 154 E= 7.7e-003 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.448052 0.000000 0.551948 MOTIF TACAGGCR DREME-44 # Word RC Word Pos Neg P-value E-value # BEST TACAGGCR YGCCTGTA 101 41 2.4e-007 1.0e-002 # TACAGGCG CGCCTGTA 41 12 4.0e-005 1.7e+000 # TACAGGCA TGCCTGTA 60 29 6.6e-004 2.8e+001 letter-probability matrix: alength= 4 w= 8 nsites= 101 E= 1.0e-002 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.594059 0.000000 0.405941 0.000000 MOTIF GCCACCAY DREME-45 # Word RC Word Pos Neg P-value E-value # BEST GCCACCAY RTGGTGGC 153 77 2.7e-007 1.2e-002 # GCCACCAC GTGGTGGC 76 31 7.7e-006 3.3e-001 # GCCACCAT ATGGTGGC 78 46 2.5e-003 1.1e+002 letter-probability matrix: alength= 4 w= 8 nsites= 154 E= 1.2e-002 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.493506 0.000000 0.506494 MOTIF MAGGAA DREME-46 # Word RC Word Pos Neg P-value E-value # BEST MAGGAA TTCCTK 1590 1334 3.2e-007 1.4e-002 # AAGGAA TTCCTT 927 781 1.5e-004 6.3e+000 # CAGGAA TTCCTG 707 588 3.9e-004 1.7e+001 letter-probability matrix: alength= 4 w= 6 nsites= 1738 E= 1.4e-002 0.581703 0.418297 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 MOTIF ACAAAACA DREME-47 # Word RC Word Pos Neg P-value E-value # BEST ACAAAACA TGTTTTGT 87 34 7.5e-007 3.2e-002 # ACAAAACA TGTTTTGT 87 34 7.5e-007 3.2e-002 letter-probability matrix: alength= 4 w= 8 nsites= 97 E= 3.2e-002 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 # Stopping reason: E-value threshold exceeded # Running time: 3139.97 seconds