Database and Motifs High-scoring Motif Occurences Debugging Information



FIMO - Motif search tool

FIMO version 4.12.0, (Release date: Tue Jun 27 16:22:50 2017 -0700)

For further information on how to interpret these results or to get a copy of the FIMO software please access http://meme.nbcr.net

If you use FIMO in your research, please cite the following paper:
Charles E. Grant, Timothy L. Bailey, and William Stafford Noble, "FIMO: Scanning for occurrences of a given motif", Bioinformatics, 27(7):1017-1018, 2011. [full text]


DATABASE AND MOTIFS

DATABASE /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeK562eGFPComparisons/USF2.IDR0.05.filt.narrowPeak.summitPlusMinus250bp.MemeChipResultsDefaultMax/USF2.IDR0.05.filt.narrowPeaksummitPlusMinus250bp.fa
Database contains 17340 sequences, 8670000 residues

MOTIFS /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/MotifData/motif_databases/CIS-BP/Homo_sapiens.meme (DNA)

MOTIF WIDTH BEST POSSIBLE MATCH
M0085_1.02 10 TCGCCTGAGG
M0104_1.02 11 ATATTAATTAA
M0105_1.02 9 TTTTAATTG
M0108_1.02 11 GATAATATTGA
M0177_1.02 10 ACCATATGTT
M0178_1.02 10 AACAGCTGTT
M0189_1.02 8 GCACGTGA
M0195_1.02 10 ACCATATGGT
M0196_1.02 10 GGCACGTGTC
M0198_1.02 10 AGCCCGTGCG
M0199_1.02 13 TAACGACACGTGC
M0211_1.02 8 GCACGTGT
M0212_1.02 10 GGCACGTGCC
M0214_1.02 9 AACATATGG
M0216_1.02 10 CGCAGCTGTG
M0217_1.02 10 ACCATATGGT
M0300_1.02 10 AATGACGTCA
M0305_1.02 9 GCCACGTGT
M0307_1.02 8 ATACGTTG
M0395_1.02 8 GTACTAAT
M0396_1.02 10 AACGGTAGCA
M0398_1.02 11 AGGAAGTGCAA
M0404_1.02 10 AAGGGGGGCA
M0405_1.02 10 TGGGCGTGGC
M0408_1.02 10 ATGTGCACAT
M0413_1.02 10 GTTGCGGGAC
M0415_1.02 8 ATAACGGT
M0422_1.02 10 CCGGGGGGTC
M0424_1.02 10 TTTGACAGCT
M0428_1.02 8 AGGAGCAC
M0431_1.02 9 ACGGTAGCA
M0432_1.02 9 CGCGCGCAC
M0433_1.02 10 ATCTAGAACA
M0436_1.02 10 TTGTTTATTG
M0437_1.02 9 TATATATAT
M0442_1.02 9 AATGCAGTG
M0443_1.02 10 TGGGCGTGGC
M0594_1.02 9 ATTTGAATT
M0603_1.02 7 TTAGCGG
M0607_1.02 9 GCGTAAATA
M0608_1.02 10 GGGGGCGTAA
M0609_1.02 10 CCCCGCGGCC
M0610_1.02 9 ATCGCGTTA
M0629_1.02 11 AATGTATCAAT
M0630_1.02 10 AATGTATCAA
M0632_1.02 10 AATGTATCAA
M0633_1.02 10 TAATGTATTA
M0635_1.02 13 AACATGTATAAAA
M0714_1.02 10 AACCGGAAGT
M0718_1.02 10 ATGTAAACAA
M0719_1.02 8 GTAAACAA
M0728_1.02 12 AATAAACAAACA
M0736_1.02 8 GTAAACAA
M0737_1.02 10 TATGTAAACA
M0747_1.02 10 AATGTAAACA
M0756_1.02 9 GTAAACAAA
M0887_1.02 9 CCTAATGAG
M0890_1.02 8 GTAATCAA
M0891_1.02 10 TTAATTGGTT
M0892_1.02 10 CCTAATTACC
M0893_1.02 10 GTTAATTAAC
M0894_1.02 8 TTAATTAG
M0896_1.02 8 TTAATTAG
M0897_1.02 10 TTTTATGGGC
M0898_1.02 8 TTACGTAA
M0900_1.02 8 TTAATTGG
M0901_1.02 8 CTTGTCAA
M0905_1.02 9 TTAATTACC
M0906_1.02 10 AATTAATTAG
M0931_1.02 9 TAATTAATT
M0937_1.02 7 TGATACC
M0942_1.02 8 TTGTAATT
M0943_1.02 8 GCTAATTA
M0949_1.02 7 TTAATGA
M0952_1.02 8 TGATACCC
M0958_1.02 7 CTAATTA
M0961_1.02 9 CTAATTGGT
M0969_1.02 9 CCAATCAGC
M0975_1.02 9 TAATTAATT
M0994_1.02 9 ATGATACCC
M0996_1.02 7 GAAATCA
M0999_1.02 9 ATTAATTAC
M1007_1.02 9 TTTATGACC
M1012_1.02 9 TTAATGACC
M1016_1.02 7 GTGATAC
M1018_1.02 7 TAATTAA
M1025_1.02 8 GCTAATTA
M1027_1.02 9 TTAATTACC
M1030_1.02 9 ACCACTTAA
M1034_1.02 7 GCAATTA
M1039_1.02 9 GCTAATTGG
M1049_1.02 10 ATGATACCCC
M1070_1.02 9 TTAATGACC
M1071_1.02 8 TTAATGAC
M1073_1.02 9 TTAATGACC
M1110_1.02 10 GGGCAATAGA
M1125_1.02 10 GCTAATTGGC
M1157_1.02 10 TTTTATGACC
M1163_1.02 9 ATTAATTAC
M1266_1.02 10 GACCGAAACC
M1281_1.02 9 CTTACGCAA
M1358_1.02 9 TAACCCTAG
M1359_1.02 10 GTTTGCGCCA
M1418_1.02 8 TGGTACCA
M1432_1.02 10 ATTGACCTCT
M1458_1.02 10 ACTGACCTCG
M1507_1.02 10 AATTTTGGCT
M1528_1.02 10 CCATGGCAAC
M1529_1.02 10 CCATAGCAAC
M1545_1.02 9 CGTACGTCA
M1581_1.02 10 TTTGCTGACT
M1582_1.02 11 ATATATAATAA
M1583_1.02 8 TTCATTGA
M1589_1.02 10 GCAGAACAAT
M1592_1.02 8 AAAACAAT
M1594_1.02 10 CATTGTTCTT
M1601_1.02 9 ATTGTTCTC
M1605_1.02 10 ATTCATCTTT
M1628_1.02 11 AGGTGTGAAGA
M1668_1.02 12 TCCAAACGAGAT
M1838_1.02 15 CATTGCCTCAGGGCA
M1841_1.02 15 GAACATTCTGTTCTT
M1863_1.02 8 GTAAACAT
M1868_1.02 14 ACAGATAAGAATCT
M1871_1.02 10 TGGGTGGGGC
M1882_1.02 21 AAAGTGAAAGTGAAAGTAAAA
M1884_1.02 15 AGCTAAAAATAGCAT
M1889_1.02 10 AAGCACATGG
M1890_1.02 18 AGAGTGCTGATTGGTCCA
M1906_1.02 11 GGGGGCGGGGC
M1915_1.02 20 GCAAGGCATGATGGGAAATC
M1917_1.02 11 GGTCACGTGGC
M1919_1.02 12 CAAGATGGCGGC
M1925_1.02 11 TATTGTGCAAT
M1926_1.02 9 CAGGTGAGG
M1927_1.02 8 GCCACGTG
M1928_1.02 11 GGGAATTTCCC
M1929_1.02 15 CATGTCTGGGCATGT
M1934_1.02 20 AGGTCAGGGTGACCTGGGCC
M1950_1.02 6 GTGGAT
M1955_1.02 11 TTTCCAGGAAA
M1963_1.02 14 GGGGCCGAGGCCTG
M1968_1.02 11 TCCCTGGGGAC
M1970_1.02 6 TGCCAA
M2065_1.02 15 AGGTCAGGGTGACCT
M2264_1.02 8 GCCATCTG
M2267_1.02 11 TTTTATGGCTT
M2268_1.02 11 TATTGCACAAT
M2270_1.02 11 TAATTTAATCA
M2273_1.02 11 GGGCGGGAAGG
M2275_1.02 13 GAACCAGGAAGTG
M2277_1.02 11 ACAGGAAGTGG
M2278_1.02 11 TGTGACTCATT
M2281_1.02 11 TCCAATCCACA
M2283_1.02 15 CAAAAGTAAACAAAG
M2286_1.02 15 TGGACTTTGGACTCT
M2287_1.02 13 GGCCATAAATCAC
M2289_1.02 13 AAGATGATGTCAT
M2292_1.02 11 GGTGACTCATC
M2296_1.02 15 CTGAGTCAGCAATTT
M2299_1.02 13 AGGGACAGCTGCA
M2301_1.02 15 AAATGGACCAATCAG
M2303_1.02 15 TGACCTCTGACCCCT
M2305_1.02 11 TGCGCAGGCGC
M2306_1.02 13 TTCATTTGCATAT
M2307_1.02 15 AGAAAGTGAAAGTGA
M2310_1.02 15 CAAACCACAAACCCC
M2313_1.02 10 CCATTGTTTT
M2314_1.02 15 GGGAGGGGGCGGGGC
M2319_1.02 14 TTCCTTTGATCTTT
M2321_1.02 20 AGACATGCCCAGACATGCCC
M2323_1.02 15 CAGATCTCGCGAGAG
M2385_1.02 11 AAGTAAACAAA
M2387_1.02 10 GTGGGGTGAT
M2388_1.02 10 ATGGGGTGAT
M2390_1.02 8 CAGGAAGG
M2391_1.02 10 GGGGCGGGGC
M2392_1.02 19 GTTGCCATGGCAACCGCGG
M4344_1.02 8 GGTTGCCA
M4427_1.02 21 GTGGCCACCAGGGGGCGCTGT
M4428_1.02 14 GGAACATTCTGTTC
M4438_1.02 15 AGGTCACGGTGACCT
M4444_1.02 14 AGGGGATTTCCCAG
M4451_1.02 11 GGTCACGTGAC
M4452_1.02 15 TCTCGATATGACTCA
M4453_1.02 15 AAGAGGAAGTGAAAC
M4454_1.02 15 AAATCTCGCGAGAAC
M4459_1.02 20 GTGCGGGGGCGGGGGGGGGG
M4461_1.02 21 GCCTTCTGGGAATTGTAGTTC
M4462_1.02 11 CGCCGGAAGTG
M4463_1.02 18 AATGTGGAAATGAGTCAG
M4467_1.02 15 ATGCCAAAAATAGCA
M4469_1.02 14 TCCATGGTGCTGAA
M4471_1.02 15 GCAGCCAAGCGTGAC
M4473_1.02 15 GCCGGCCAATCAGAG
M4476_1.02 15 TCACCTGTTGCTAGG
M4477_1.02 19 CCATGGCCATATAAGGCAA
M4478_1.02 20 CAGGTGATTTCCGGGAAATG
M4479_1.02 11 GCAGCAGCTGT
M4481_1.02 15 GGTCACGTGGCCCGG
M4484_1.02 15 CTGGGAATTGTAGTC
M4509_1.02 17 ATTTGCATAACAAAGGA
M4511_1.02 8 TGACCTCT
M4522_1.02 10 CCGGAAGTGG
M4525_1.02 15 AGCCTCAGGGCATGG
M4526_1.02 15 GGGGGGTGACTCATC
M4527_1.02 21 GGACTACAACTCCCAGCAGGC
M4532_1.02 10 CCACGTGCTC
M4536_1.02 15 GGGGAGGGCGCGCGG
M4537_1.02 15 GGCGGGAAATTTGAA
M4543_1.02 11 GGAACCACGTG
M4545_1.02 15 AGAAAGTGAAAGTGA
M4551_1.02 17 TTCATACTGGAGAGAAA
M4553_1.02 10 GGTCACGTGC
M4565_1.02 14 CAGGATGAGTCACC
M4567_1.02 15 GCAAAGTAAACAGAG
M4569_1.02 18 GTCCCGGGTTCGAATCCC
M4572_1.02 15 TGCTGACTCAGCAAA
M4600_1.02 11 GCAGATAAGGA
M4604_1.02 21 GGGGAGGAGGGAGGGGAGGAG
M4612_1.02 15 CCGCCAGGGGGCGCC
M4619_1.02 11 GGGTGACTCAT
M4623_1.02 15 CGGTGACTCATCCTT
M4629_1.02 17 CATGACTCAGCAATTTT
M4635_1.02 15 GAAAATGAAACTGAA
M4636_1.02 21 CTGCCCTCATCCAAGATGGCG
M4640_1.02 15 GGGCGGGGGTCTCGG
M4665_1.02 15 CAGATAAGAATCTGT
M4680_1.02 8 GTCACGTG
M4681_1.02 10 TGCTGAGTCA
M4692_1.02 10 ACTACAACTC
M4698_1.02 15 CTGGACTTTGGACTC
M4702_1.02 8 TGACCTTT
M4708_1.02 10 TATGCAAATA
M4840_1.02 11 AAATGCGCAAC
M4850_1.02 21 TGTTGTGTCCGTGCCATCTGG
M4930_1.02 11 AAATCGTGACT
M4971_1.02 10 GTAACAGCTG
M5116_1.02 9 ACCACCTGT
M5209_1.02 11 GTGGGCGTGGC
M5234_1.02 10 GGTCACGTAC
M5284_1.02 10 GCTAATTAGC
M5287_1.02 13 CTAATTAAATTAA
M5291_1.02 13 TTAATTTAATTAA
M5292_1.02 13 GGATGATGCAATA
M5293_1.02 14 CGATGACGTCATCG
M5294_1.02 10 GTTAAACGGT
M5300_1.02 17 TAATCGGTATTTAATTG
M5302_1.02 14 TGATGACGTCATCA
M5303_1.02 17 TGCTTTCTAGGAATTCA
M5304_1.02 10 ACCATATGGT
M5307_1.02 12 AAACATATGTTT
M5308_1.02 10 ACCATATGTT
M5310_1.02 8 TTAATTGG
M5320_1.02 15 CCCGCATACAACGAA
M5321_1.02 10 AACACGTGTT
M5322_1.02 8 TTTTTATT
M5323_1.02 14 TGATGACGTCACCG
M5325_1.02 14 TGATGACGTGGCAT
M5335_1.02 18 ATCGATAATTTTATCGAT
M5339_1.02 10 GATAATTAGG
M5342_1.02 8 GTAATTGG
M5343_1.02 8 ATAATTAC
M5344_1.02 8 GTAATTGG
M5345_1.02 10 GTTAATCCGC
M5346_1.02 10 GCTAATCCGT
M5348_1.02 13 CTAATCTAATTAA
M5349_1.02 13 CTAATTTAATCAA
M5363_1.02 12 TTTCCCGCCAAA
M5377_1.02 12 AACCCGGAAGTG
M5388_1.02 10 GCTAATTAGC
M5390_1.02 10 GCTAATTGGG
M5394_1.02 10 GTTAATTGGA
M5398_1.02 10 ACCGGAAGTG
M5414_1.02 10 GTTAATTGGT
M5420_1.02 10 ACCGGAAGTA
M5421_1.02 11 AACCGGAAATA
M5422_1.02 10 ACCGGAAGTG
M5425_1.02 15 CCGGAAGCGGAAGTG
M5427_1.02 10 GCTAATTACC
M5428_1.02 10 GCTAATTACC
M5430_1.02 10 ACCACCTGTT
M5435_1.02 14 TCGCTGTGTCATTC
M5445_1.02 14 AGTAAATATTTTTT
M5446_1.02 7 GTAAACA
M5460_1.02 7 GTAAACA
M5471_1.02 14 GTAAACATGTTTAC
M5480_1.02 10 GCTAATTAGT
M5481_1.02 10 GCTAATTGGT
M5487_1.02 10 TATGCGGGTA
M5490_1.02 16 GCTTCGTGGGGGGTCT
M5491_1.02 14 CTTCGCGGGGGGTC
M5493_1.02 8 GTACGTAA
M5497_1.02 17 AACCGGTTTAACCGGTT
M5500_1.02 10 GCTAATCCCC
M5501_1.02 10 CCTAATCCGC
M5502_1.02 10 TTTAATTAGG
M5503_1.02 10 TTTAATTAGT
M5504_1.02 12 TGGCACGTGCCG
M5506_1.02 12 TGGCACGTGCCA
M5509_1.02 10 GGCACGTGTC
M5512_1.02 9 GGTGGGCAT
M5517_1.02 10 ACTAGTTAAC
M5518_1.02 11 TTTTAATTGCT
M5519_1.02 11 TTTTAATTGGT
M5520_1.02 11 TGTTAATTGCT
M5530_1.02 12 TATAATCGTTTT
M5541_1.02 10 GTTAATTACT
M5542_1.02 10 GCTAATTAGT
M5543_1.02 10 CTTAATTAGT
M5544_1.02 10 TTTTTATGGG
M5547_1.02 11 GGTCGTAAAAT
M5551_1.02 9 TTTTATTAC
M5553_1.02 10 CCAATAAAAA
M5555_1.02 10 GTCGTAAAAA
M5557_1.02 9 GTAATAAAA
M5563_1.02 10 GCTAATTAGC
M5567_1.02 13 GAACGTTCTAGAA
M5568_1.02 15 TTCGAAACGTTCGAA
M5571_1.02 10 GACAGGTGTA
M5581_1.02 12 CATGTCATGTAA
M5582_1.02 12 CATGTCATGTAA
M5583_1.02 8 TTAAGTGC
M5584_1.02 13 TTAATCTAATTAA
M5587_1.02 9 ATGACTCAT
M5591_1.02 18 CAAAAAGGGGCGTGGCAT
M5592_1.02 14 AAGGGGGCGTGGCC
M5593_1.02 11 GGGGGCGTGGC
M5594_1.02 13 CTCGACCTAATTA
M5602_1.02 8 TTAATTGG
M5604_1.02 8 TTAATTAA
M5605_1.02 8 TTAATTAA
M5616_1.02 12 GCTATAAATAGC
M5621_1.02 8 CCTGTCAA
M5623_1.02 10 GCTAATTAAC
M5624_1.02 10 AGTAATTAAC
M5627_1.02 10 CACAGGTGTT
M5628_1.02 8 AGGTGTGA
M5631_1.02 10 GTTAATTAGA
M5632_1.02 10 ATCACGTGAT
M5634_1.02 10 ACCACGTGCC
M5635_1.02 10 TTTAATTACC
M5636_1.02 10 AACAGCTGTT
M5637_1.02 18 TAATTGGTTTTTAATTGC
M5643_1.02 12 ACCGTTAAACGG
M5652_1.02 10 GCCATATGGT
M5653_1.02 10 GACATATGTT
M5660_1.02 15 TTGGCACGGTGCCAA
M5662_1.02 15 TTGGCACAGTGCCAG
M5664_1.02 15 TTGGCACCGTGCCAA
M5672_1.02 10 GCTAATTAGC
M5689_1.02 11 AATTTGCTGAC
M5690_1.02 10 AACATATGTT
M5691_1.02 10 ACCATATGTT
M5693_1.02 10 ACCATATGTT
M5697_1.02 14 ATTATTGATTTTTT
M5702_1.02 17 TGCAGTCATGCGTGACG
M5704_1.02 10 TAATCGATTA
M5705_1.02 8 CTAATTAG
M5709_1.02 10 TAATCGATTA
M5711_1.02 17 TGCAGTCATGCGTGACG
M5714_1.02 11 TAATTTAATTA
M5715_1.02 11 TAATTTAATTA
M5717_1.02 9 CTTAATCCC
M5720_1.02 9 CTTAATCCC
M5722_1.02 12 TGACACCTGTCA
M5729_1.02 9 ATTTGCATA
M5735_1.02 13 AAATTAGCATAAT
M5738_1.02 9 ATTTGCATA
M5740_1.02 14 ATGAATAATTAATG
M5743_1.02 16 ATGCATAATTAATGAG
M5744_1.02 9 ATTTGCATA
M5746_1.02 10 ATAATGAGCT
M5750_1.02 13 GGGGGCCTTGAAA
M5753_1.02 12 CAAGACGCCTTA
M5771_1.02 10 GTTAATTGGC
M5772_1.02 8 TTAATTGG
M5777_1.02 16 CGTTGCCATGGCAACG
M5782_1.02 9 GGATAATCC
M5804_1.02 15 GAGCAACAGGTGGTT
M5805_1.02 13 ATGCAACAGGTGG
M5807_1.02 8 TTAATTGG
M5815_1.02 12 ACAATAACATTG
M5825_1.02 15 AACACTACCATTGTT
M5835_1.02 16 AACAATGTTCATTGTT
M5838_1.02 16 AACAATGTGCAGTGTT
M5856_1.02 12 AGTGGGCGTGGC
M5857_1.02 11 ACCCGGATGTA
M5865_1.02 14 AAAAAGAGGAAGTA
M5873_1.02 10 AGGTGTGAAA
M5875_1.02 20 AGGTGTGAAAAAAGGTGTGA
M5880_1.02 19 AGGTGTGAAATTCACACCT
M5882_1.02 20 TTTCACACCTAGGTGTGAAA
M5883_1.02 16 TCACACCTTCACACCT
M5889_1.02 16 GGTGTGAATTCACACC
M5896_1.02 8 AGGTGTGA
M5903_1.02 12 AAAGATCAAAGG
M5932_1.02 10 GTCACGTGAT
M5934_1.02 12 TGACAGCTGTCA
M5935_1.02 12 TGACAGCTGTCA
M5941_1.02 13 CTAATTTAATTAG
M5944_1.02 8 CTAATTAC
M5945_1.02 8 CTAATTAC
M5949_1.02 8 CTAATTAT
M5955_1.02 11 TAATGGCGGAC
M5958_1.02 13 TATGTCGCGATAG
M5959_1.02 17 TTTCGCCTGGCACGTCA
M5962_1.02 12 TTCGGTGGTCGC
M5965_1.02 15 GCACAGCGGGGGGTC
M5967_1.02 19 ATGTTAAATGTAGATTAAG
M5970_1.02 17 GTCGTGTTGTGGGAAAG
M5971_1.02 14 TCGAGGCTAGACCA
M5972_1.02 17 GAGTATTATGGGATGGA
M5973_1.02 18 AGGTGTTCTGTTAACACT
M5974_1.02 12 GGGTTCGAGGGT
M5976_1.02 17 TTCGTGGCATTTTTCTA
M5977_1.02 10 GTGGGGGGGG
M5979_1.02 12 TGTGGGAAAAGC
M5980_1.02 10 AGGTAGGTAC
M5981_1.02 15 TTTTCAGTGTGTGCA
M5998_1.02 12 GGTGACGTCATT
M6037_1.02 12 TTTGTCATGTAG
M6111_1.02 13 AGAAAGGGTTAAT
M6114_1.02 10 AAAGCAAACA
M6115_1.02 15 CATGTCTGGGCATGT
M6119_1.02 15 AAAAAGAGGAAGTGG
M6123_1.02 15 GGGGTGGGGGAGGGG
M6131_1.02 21 CCGGTTCAAACCGGTTCTGGC
M6139_1.02 9 GCACGCAAC
M6140_1.02 18 ATTGGTTTTATTGGTTAA
M6141_1.02 12 TAATCCAATTAT
M6144_1.02 10 GCCCCCGGGC
M6146_1.02 14 ACGCGCCTCGGGCG
M6147_1.02 22 TTTAATTTGATTTCGATTAATT
M6149_1.02 13 GGTTGGTATTGTG
M6150_1.02 12 GCCTCCCACGCC
M6151_1.02 8 TCACGTGC
M6152_1.02 10 GTGACGTCAC
M6154_1.02 12 TAAGGAAGAAGG
M6155_1.02 12 GTGGTGACGTGG
M6157_1.02 10 TCATTAATTG
M6159_1.02 16 TTCCTAGAAAGCTTTT
M6161_1.02 20 ACCGGGTCACGTGCAGAGGG
M6162_1.02 14 GGGTCACGTGTCCA
M6163_1.02 12 TTTGTTGTGTTC
M6164_1.02 25 ACATAGTGACACCTAGGTGTGAAAT
M6166_1.02 15 ATTATGTTAAATCCC
M6167_1.02 8 ACATAAAT
M6171_1.02 11 AATTGTGCAAT
M6172_1.02 12 AAGATTGCGCAA
M6173_1.02 13 CAGATTGCAAAAT
M6174_1.02 11 AGCCAATCAGC
M6176_1.02 12 TGACCTTTGACC
M6180_1.02 9 GTGACGTCA
M6181_1.02 11 CACTGACGTCA
M6182_1.02 8 CTAATCCC
M6184_1.02 14 AGGGGGATCGATGG
M6185_1.02 7 CGTTGGC
M6186_1.02 11 TGTTACATAAC
M6187_1.02 13 GGGGATTGCATTT
M6188_1.02 8 ATAATTAT
M6189_1.02 10 GATAATTACA
M6191_1.02 10 GGCGCGAAAC
M6192_1.02 10 CGCGCGAAAC
M6194_1.02 10 CGCGCCAAAC
M6196_1.02 13 TAGGGCGCGAAAC
M6197_1.02 9 CGTGACGTC
M6199_1.02 11 GGCGTGGGCGG
M6200_1.02 11 AGAGTGGGTGT
M6201_1.02 11 GGCGGCAGGGC
M6204_1.02 15 TAGCAGGAAGTGAGT
M6205_1.02 14 GGCAAACAGGAAAT
M6206_1.02 11 ATAAGGAAGTA
M6207_1.02 9 ACCGGAAGT
M6208_1.02 12 CCCAGGAAGTGC
M6210_1.02 13 TGCCCACGTGGTG
M6211_1.02 14 CGGGGATACGAAAT
M6212_1.02 13 CCCACGTACGCAC
M6213_1.02 11 ACCGGAAATCC
M6215_1.02 9 TGACCTTGA
M6216_1.02 9 TGACCTTGA
M6221_1.02 11 GCGGGAAGTGG
M6222_1.02 8 CAGGAAGT
M6223_1.02 13 GACAGGAAGTAAC
M6224_1.02 17 GCCACAGGAAGTAACAC
M6225_1.02 16 AAGATAAGATAAGATA
M6226_1.02 10 CAGGAAATAA
M6228_1.02 10 CTGACTCATC
M6234_1.02 13 GCAAAGCAAACAA
M6235_1.02 15 CTTAAGTAAACAACG
M6236_1.02 15 TCTGGCAAAACAAAC
M6237_1.02 9 AAACAAACA
M6238_1.02 11 AAAATAAACAT
M6239_1.02 11 AAAAGTAAACA
M6240_1.02 12 GACCAATCAGAG
M6241_1.02 10 TAAATAAACA
M6242_1.02 13 TAAACAAAAACAA
M6244_1.02 13 AAAAACAAACAAC
M6245_1.02 16 AAAAAGTAAACAAACC
M6246_1.02 13 AGGTAAACAAACA
M6247_1.02 9 AATAAACAA
M6249_1.02 9 AAACAAATT
M6250_1.02 12 AAATAAACAATG
M6251_1.02 12 TTGTGTTTTTTT
M6256_1.02 9 ACAGATAAC
M6257_1.02 17 TAAGAGATAACTTAGAT
M6258_1.02 7 AAGATAA
M6259_1.02 14 CACATGCGGGTATT
M6262_1.02 11 TGCAGTGATTT
M6263_1.02 10 GCTGTGATTT
M6264_1.02 11 CTGGGTGGTCT
M6265_1.02 11 GTGGGTGGTCT
M6266_1.02 11 CTGGGTGGTCC
M6267_1.02 10 GTGGGGGGTA
M6268_1.02 12 AATGCCAGACGC
M6269_1.02 9 ACTCATTGA
M6270_1.02 20 AGGGACGCAGCTGCTCCCCA
M6271_1.02 13 GGGCTCGTGGCGG
M6272_1.02 16 AGGCCACGTGCCGGAT
M6273_1.02 17 GGGGGCACGTGGCATTA
M6274_1.02 9 GGGTTGCCC
M6275_1.02 12 GCGTACGTGCGG
M6276_1.02 16 GCGCTAGCGGACGTTA
M6277_1.02 13 CTGTTACGTAATC
M6278_1.02 12 TAGGGCTGCAAA
M6279_1.02 7 AAAATAC
M6280_1.02 15 AATAATCGCGAATAT
M6281_1.02 15 GGTTAATTATTAACC
M6282_1.02 14 GTTAATCATTAACC
M6285_1.02 14 TTTATTGATTTTTT
M6287_1.02 14 AGAATGTTCTAGAA
M6289_1.02 12 TCATAAATCATC
M6290_1.02 11 CCAATAAAACC
M6291_1.02 10 CATCCATCAA
M6292_1.02 10 CATTAATCAA
M6293_1.02 15 TCCAATCTATTGATT
M6295_1.02 10 CCATCCATCA
M6296_1.02 13 TGCATCAATCATT
M6297_1.02 10 CATTAATCAA
M6298_1.02 11 GCATTAATCAA
M6299_1.02 15 AAAGTAATAAATCAT
M6300_1.02 14 GGGCATCAATCAAA
M6301_1.02 10 AATTAAAGCA
M6302_1.02 11 TCCCTAATAAA
M6303_1.02 8 TTAATTGA
M6304_1.02 10 CCATTAAACT
M6306_1.02 12 TGTCAGGGGGCA
M6308_1.02 14 GGAAAGTGAAAGCA
M6309_1.02 17 GGAAAGCGAAACTGAAA
M6311_1.02 20 TAAAGGAAAGCCAAAAGTGA
M6312_1.02 10 GAAAGTGAAA
M6313_1.02 15 GAGAAAGTGAAACTG
M6314_1.02 12 GAAAGCGAAACT
M6315_1.02 7 GTTAATG
M6316_1.02 9 CCAGGTGCA
M6321_1.02 17 GGCGGGGAGGTGGGGGC
M6322_1.02 11 CAGGGTGTGGC
M6323_1.02 15 TGCCTGGGTGTGGCT
M6324_1.02 10 TGGGCGGGGC
M6325_1.02 8 GGGGGCGG
M6326_1.02 9 CAGGGGGTG
M6327_1.02 7 CTTTGAT
M6328_1.02 13 CACTTTTAATTAG
M6329_1.02 13 AAAATTAATTAAT
M6330_1.02 21 GTGCTGACCCCGCAGCCTTCG
M6331_1.02 9 TGCTGACGG
M6332_1.02 8 TTGCTGAC
M6333_1.02 7 CATGACT
M6336_1.02 17 GGGGGGGGGAGGGAGGG
M6337_1.02 11 GGGGCCGGAGG
M6338_1.02 17 TACAACAACCTGTTCTT
M6339_1.02 7 CTCCGGG
M6342_1.02 12 GCTAAAAATAGC
M6343_1.02 13 CATAAAACTGTCA
M6344_1.02 13 TGACAGCTGTCAA
M6345_1.02 10 ATCACATGAC
M6346_1.02 19 CCACGGCGGTGTCACATGC
M6347_1.02 7 TAATTGT
M6348_1.02 17 AGTGCCGTGTGCAAAAC
M6349_1.02 10 TCAACCTGCA
M6350_1.02 7 CAGTTGG
M6352_1.02 8 CCACGTGG
M6353_1.02 7 GCAGCTG
M6354_1.02 9 GACAGCTGC
M6355_1.02 13 TGACAGCTGCTGC
M6356_1.02 9 GGTGGGGAA
M6357_1.02 8 TTTAATGG
M6358_1.02 12 CGGCAGATGGCC
M6359_1.02 7 AATGACT
M6360_1.02 12 CATGACTCAGCA
M6361_1.02 13 ATGGAAATTTCCA
M6363_1.02 9 AATTTTCCA
M6364_1.02 9 AGTTTTCCA
M6365_1.02 10 AAATTTTCCT
M6366_1.02 15 CATGGAGTTTTCCAC
M6368_1.02 14 ATGCATTACATAAC
M6370_1.02 11 GGAATCTCCCT
M6373_1.02 14 CAGCCAATCAGCGC
M6374_1.02 10 CTCAAGTGCT
M6375_1.02 12 AAACCACTTAAA
M6376_1.02 7 TCAAGTG
M6377_1.02 9 TTCAAGGAC
M6378_1.02 13 AATAAGTATATAA
M6379_1.02 11 AGTTAAGTGGA
M6380_1.02 9 CTAATTGGT
M6381_1.02 10 TCTCCCACGC
M6382_1.02 14 TCTGACCTACTTTT
M6383_1.02 19 CGTTGACCTTTGACCTTTA
M6384_1.02 14 AGGTCATTGACCCT
M6385_1.02 19 CTGAACTTTTTTGACCTCA
M6387_1.02 18 CTGAACTTTCCTGACCCC
M6389_1.02 13 CTGACCTCTGGCC
M6391_1.02 14 TGACTTTTGACTTT
M6392_1.02 18 TCAAGTGAACTTTGTCCT
M6393_1.02 9 GTGACCTTT
M6394_1.02 9 GTGACCTTT
M6395_1.02 10 CTGACCTTTG
M6396_1.02 10 TGGCCTTGAA
M6397_1.02 13 TGACCTTGAACTT
M6399_1.02 21 GTCTTGTTATTGATTTTTTTT
M6400_1.02 8 CTAATCCT
M6401_1.02 15 CTTTAATCCCTTAAC
M6402_1.02 9 TGTAACTGT
M6406_1.02 18 GTTCAGTCATGCGTGACA
M6410_1.02 11 TCAAGCGTGAA
M6411_1.02 14 GTCACTGAAGCGGG
M6412_1.02 15 CCCATCAATCAAATT
M6413_1.02 15 CCATCAATCAATTTA
M6415_1.02 9 CTAATTACC
M6416_1.02 11 TCTGTGGTTTG
M6417_1.02 13 ATATATTCATGAG
M6418_1.02 10 TTTAATCCCA
M6419_1.02 13 CATCAATCAAGCT
M6420_1.02 17 GGGGGCATCAGGAGGGG
M6422_1.02 10 CGGGGGGCCC
M6423_1.02 9 ATTTGCATA
M6425_1.02 14 TTTGCATTACAATG
M6426_1.02 10 CATAAATAAT
M6427_1.02 13 CAGCTCATTAATA
M6429_1.02 13 CATAATTTATGCA
M6430_1.02 7 TGACCTT
M6432_1.02 14 TGACCTTTGTCCTA
M6433_1.02 18 GTGACCTTTGACCTACTT
M6436_1.02 13 TACAGACTGTTCT
M6438_1.02 15 GAGTAATTAATATAA
M6439_1.02 7 TAATCTG
M6440_1.02 7 TTAATTG
M6441_1.02 21 GGACAGCTGTTCTGTTTCCTG
M6442_1.02 17 CCCTGCCCCCCCCTTCC
M6443_1.02 7 TGACCTC
M6445_1.02 11 GCCCTGACCTC
M6446_1.02 20 GTGACCTCTGGGTGACCCCC
M6448_1.02 12 GGGGGATTTCCC
M6449_1.02 12 TGGGGATTTCCC
M6451_1.02 12 GTTGCCAGGGAA
M6453_1.02 14 TTACCATGGCAACC
M6454_1.02 12 TGACCTAGTTTT
M6455_1.02 13 CTGACCTACTTTT
M6456_1.02 22 GGGGGGGGGGGTGGTTTGGGGT
M6457_1.02 10 TAACCACAGA
M6459_1.02 14 AACCACAAACCCCA
M6461_1.02 10 TGTGACCTCA
M6462_1.02 13 GTGACCTTTGACC
M6463_1.02 12 AGCCTGTCTGCC
M6464_1.02 11 GTGTCCGTCTG
M6465_1.02 10 GTGTCTGGCC
M6466_1.02 9 TGTCTGGCC
M6468_1.02 8 CCAGGTGG
M6469_1.02 7 CCAGGTG
M6470_1.02 7 TCTTTGT
M6471_1.02 8 CATTGTTC
M6472_1.02 7 CATTGTT
M6473_1.02 18 CAACAATCTTCATTGTCC
M6474_1.02 19 GGAAAAGAACAATGGGTTC
M6475_1.02 16 ATTTGCATAACAATGG
M6476_1.02 12 GAGAACAAAGCG
M6477_1.02 8 TAACAATA
M6478_1.02 11 AGAACAATGGG
M6482_1.02 20 GGGGGGGGGCGGGGCCGGGG
M6483_1.02 24 GGGGCCAGGGGGGGGGCGGGGCCG
M6485_1.02 12 AAAAAGAGGAAG
M6486_1.02 16 CGGCTGTTACCCTGGG
M6490_1.02 9 AAAACAAAA
M6491_1.02 12 TTTCCAGGAATT
M6492_1.02 13 TTTTCTGGGAATT
M6496_1.02 13 TTTCCCAGAAAAG
M6497_1.02 13 TTCCCAGGAATTT
M6498_1.02 9 TGACCTTGA
M6499_1.02 9 CGTGGGAAA
M6500_1.02 12 GACCATCTGTTC
M6503_1.02 25 GTCGCTTCTCACACCTCTGATGGCA
M6504_1.02 24 AGGTAGAGAATTAGGTGATAAAAA
M6505_1.02 8 AGGTGTGA
M6506_1.02 12 GCGCTTTGTTCT
M6507_1.02 14 CACATTCCTGCGCC
M6508_1.02 15 GATATTTCTGCTCTA
M6509_1.02 12 AAAAATAGCCCT
M6510_1.02 14 TGTTTATGTAAATG
M6513_1.02 11 GCCAGCTGCGG
M6514_1.02 16 GCCTGAACTGGCCAGA
M6515_1.02 14 AAATGGCGGGAAAC
M6516_1.02 11 GACCATCTGGT
M6517_1.02 10 GGTCATGTGG
M6518_1.02 9 GGTCACGTG
M6519_1.02 16 CAGGTGACACCTGACA
M6521_1.02 10 CTGACCTGAG
M6523_1.02 17 TGACCTGACCTGACCTC
M6525_1.02 11 CGCCAAGGAGC
M6527_1.02 10 CCCCAGGTGG
M6529_1.02 7 TCTCTGG
M6532_1.02 7 TGACCTC
M6534_1.02 11 TTAGCTAATTA
M6535_1.02 13 GCGGGGGCGGGGG
M6536_1.02 12 GACGTGTCATTA
M6537_1.02 11 GGGGATTGGCC
M6539_1.02 22 CGGAGAGGGGGAGGGGGGGGGC
M6540_1.02 15 CAATAGCGGTGGTGG
M6542_1.02 13 AGATGATAGAGCC
M6544_1.02 12 GGGGATTTCCCA
M6545_1.02 14 GGTAGGGAAACCCC
M6546_1.02 11 ATTAATAATTA
M6547_1.02 19 GGGGGCCCCAGGCCTCGGC
M6548_1.02 9 GGGGTGGTC
M6549_1.02 9 GGGGTGGTC
M6550_1.02 9 TGGGTGGTC
M6552_1.02 15 GGGGTGGGGGAGGGG
M6553_1.02 12 GAGGGGGGCGGA
M6554_1.02 14 TCCAGATGTTTCGG
M6555_1.02 9 CGATAATGA
M6556_1.02 24 GGGCAACAAATCCCTGCGCCCCGT
M6557_1.02 12 GGAAAAAATCGG
M6558_1.02 15 GCACCCTTGGGTGCC
M6559_1.02 16 CCCACGGTTACTGCCG

Random model letter frequencies (/srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeK562eGFPComparisons/USF2.IDR0.05.filt.narrowPeak.summitPlusMinus250bp.MemeChipResultsDefaultMax/background):
A 0.241 C 0.259 G 0.259 T 0.241


SECTION I: HIGH-SCORING MOTIF OCCURENCES

Motif ID Alt ID Sequence Name Strand Start End p-value q-value Matched Sequence
M5493_1.02 GMEB2 chr20 + 10318927 10318934 1.41e-05 1 GTACGTAA
M5493_1.02 GMEB2 chr16 + 17329141 17329148 1.41e-05 1 gtacgtaa
M5493_1.02 GMEB2 chr12 + 48352745 48352752 1.41e-05 1 GTACGTAA
M5493_1.02 GMEB2 chr15 + 67370102 67370109 1.41e-05 1 GTACGTAA
M5493_1.02 GMEB2 chr7 + 105387090 105387097 1.41e-05 1 GTACGTAA
M5493_1.02 GMEB2 chr4 + 170038407 170038414 1.41e-05 1 GTACGTAA
M5493_1.02 GMEB2 chr1 + 226553862 226553869 1.41e-05 1 gtacgtaa
M5493_1.02 GMEB2 chr8 - 16315045 16315052 1.41e-05 1 GTACGTAA
M5493_1.02 GMEB2 chr16 - 31033348 31033355 1.41e-05 1 GTACGTAA
M5493_1.02 GMEB2 chr16 - 31033348 31033355 1.41e-05 1 GTACGTAA
M5493_1.02 GMEB2 chr1 - 38308575 38308582 1.41e-05 1 GTACGTAA
M5493_1.02 GMEB2 chr4 - 53528583 53528590 1.41e-05 1 GTACGTAA
M5493_1.02 GMEB2 chr17 - 64024587 64024594 1.41e-05 1 GTACGTAA
M5493_1.02 GMEB2 chr10 - 72261369 72261376 1.41e-05 1 GTACGTAA
M5493_1.02 GMEB2 chr12 - 94128283 94128290 1.41e-05 1 GTACGTAA
M5493_1.02 GMEB2 chr4 - 128552960 128552967 1.41e-05 1 GTACGTAA
M5493_1.02 GMEB2 chr3 - 133691327 133691334 1.41e-05 1 GTACGTAA
M5493_1.02 GMEB2 chr7 - 134317781 134317788 1.41e-05 1 GTACGTAA
M5493_1.02 GMEB2 chr7 - 139422382 139422389 1.41e-05 1 GTACGTAA
M5493_1.02 GMEB2 chr2 - 173965156 173965163 1.41e-05 1 GTACGTAA
M5493_1.02 GMEB2 chrX + 1535660 1535667 2.72e-05 1 TTACGTAA
M5493_1.02 GMEB2 chrX - 1535660 1535667 2.72e-05 1 TTACGTAA
M5493_1.02 GMEB2 chr4 + 5620344 5620351 2.72e-05 1 TTACGTAA
M5493_1.02 GMEB2 chr4 - 5620344 5620351 2.72e-05 1 TTACGTAA
M5493_1.02 GMEB2 chr12 + 13437243 13437250 2.72e-05 1 TTACGTAA
M5493_1.02 GMEB2 chr12 - 13437243 13437250 2.72e-05 1 TTACGTAA
M5493_1.02 GMEB2 chr8 + 21962080 21962087 2.72e-05 1 ttacgtaa
M5493_1.02 GMEB2 chr8 - 21962080 21962087 2.72e-05 1 TTACGTAA
M5493_1.02 GMEB2 chr10 + 22658849 22658856 2.72e-05 1 ttacgtaa
M5493_1.02 GMEB2 chr10 - 22658849 22658856 2.72e-05 1 TTACGTAA
M5493_1.02 GMEB2 chr6 + 38732148 38732155 2.72e-05 1 ttacgtaa
M5493_1.02 GMEB2 chr6 - 38732148 38732155 2.72e-05 1 TTACGTAA
M5493_1.02 GMEB2 chr17 + 38853841 38853848 2.72e-05 1 TTACGTAA
M5493_1.02 GMEB2 chr17 - 38853841 38853848 2.72e-05 1 TTACGTAA
M5493_1.02 GMEB2 chr19 + 40833707 40833714 2.72e-05 1 ttacgtaa
M5493_1.02 GMEB2 chr19 - 40833707 40833714 2.72e-05 1 TTACGTAA
M5493_1.02 GMEB2 chr1 + 42869636 42869643 2.72e-05 1 ttacgtaa
M5493_1.02 GMEB2 chr1 - 42869636 42869643 2.72e-05 1 TTACGTAA
M5493_1.02 GMEB2 chr20 + 44210977 44210984 2.72e-05 1 TTACGTAA
M5493_1.02 GMEB2 chr20 + 44210977 44210984 2.72e-05 1 TTACGTAA
M5493_1.02 GMEB2 chr20 - 44210977 44210984 2.72e-05 1 TTACGTAA
M5493_1.02 GMEB2 chr20 - 44210977 44210984 2.72e-05 1 TTACGTAA
M5493_1.02 GMEB2 chr3 + 44518756 44518763 2.72e-05 1 ttacgtaa
M5493_1.02 GMEB2 chr3 - 44518756 44518763 2.72e-05 1 TTACGTAA
M5493_1.02 GMEB2 chr20 + 44736236 44736243 2.72e-05 1 TTACGTAA
M5493_1.02 GMEB2 chr20 - 44736236 44736243 2.72e-05 1 TTACGTAA
M5493_1.02 GMEB2 chr2 + 46340132 46340139 2.72e-05 1 TTACGTAA
M5493_1.02 GMEB2 chr2 - 46340132 46340139 2.72e-05 1 TTACGTAA
M5493_1.02 GMEB2 chr20 + 50440821 50440828 2.72e-05 1 TTACGTAA
M5493_1.02 GMEB2 chr20 + 50440821 50440828 2.72e-05 1 TTACGTAA
M5493_1.02 GMEB2 chr20 - 50440821 50440828 2.72e-05 1 TTACGTAA
M5493_1.02 GMEB2 chr20 - 50440821 50440828 2.72e-05 1 TTACGTAA
M5493_1.02 GMEB2 chr8 + 55930547 55930554 2.72e-05 1 TTACGTAA
M5493_1.02 GMEB2 chr8 - 55930547 55930554 2.72e-05 1 TTACGTAA
M5493_1.02 GMEB2 chr14 + 68792558 68792565 2.72e-05 1 TTACGTAA
M5493_1.02 GMEB2 chr14 - 68792558 68792565 2.72e-05 1 TTACGTAA
M5493_1.02 GMEB2 chr11 + 70700046 70700053 2.72e-05 1 TTACGTAA
M5493_1.02 GMEB2 chr11 - 70700046 70700053 2.72e-05 1 TTACGTAA
M5493_1.02 GMEB2 chr15 + 71279258 71279265 2.72e-05 1 TTACGTAA
M5493_1.02 GMEB2 chr15 - 71279258 71279265 2.72e-05 1 TTACGTAA
M5493_1.02 GMEB2 chr1 + 84688822 84688829 2.72e-05 1 TTACGTAA
M5493_1.02 GMEB2 chr1 - 84688822 84688829 2.72e-05 1 TTACGTAA
M5493_1.02 GMEB2 chr2 + 86195840 86195847 2.72e-05 1 TTACGTAA
M5493_1.02 GMEB2 chr2 - 86195840 86195847 2.72e-05 1 TTACGTAA
M5493_1.02 GMEB2 chr16 + 90048429 90048436 2.72e-05 1 TTACGTAA
M5493_1.02 GMEB2 chr16 - 90048429 90048436 2.72e-05 1 TTACGTAA
M5493_1.02 GMEB2 chr15 + 101445713 101445720 2.72e-05 1 TTACGTAA
M5493_1.02 GMEB2 chr15 - 101445713 101445720 2.72e-05 1 TTACGTAA
M5493_1.02 GMEB2 chr7 + 103614131 103614138 2.72e-05 1 TTACGTAA
M5493_1.02 GMEB2 chr7 - 103614131 103614138 2.72e-05 1 TTACGTAA
M5493_1.02 GMEB2 chr4 + 104900218 104900225 2.72e-05 1 ttacgtaa
M5493_1.02 GMEB2 chr4 - 104900218 104900225 2.72e-05 1 TTACGTAA
M5493_1.02 GMEB2 chr9 + 123268852 123268859 2.72e-05 1 TTACGTAA
M5493_1.02 GMEB2 chr9 + 123268852 123268859 2.72e-05 1 TTACGTAA
M5493_1.02 GMEB2 chr9 - 123268852 123268859 2.72e-05 1 TTACGTAA
M5493_1.02 GMEB2 chr9 - 123268852 123268859 2.72e-05 1 TTACGTAA
M5493_1.02 GMEB2 chr9 + 124658702 124658709 2.72e-05 1 TTACGTAA
M5493_1.02 GMEB2 chr9 - 124658702 124658709 2.72e-05 1 TTACGTAA
M5493_1.02 GMEB2 chr11 + 129894475 129894482 2.72e-05 1 TTACGTAA
M5493_1.02 GMEB2 chr11 - 129894475 129894482 2.72e-05 1 TTACGTAA
M5493_1.02 GMEB2 chr12 + 130826616 130826623 2.72e-05 1 TTACGTAA
M5493_1.02 GMEB2 chr12 - 130826616 130826623 2.72e-05 1 TTACGTAA
M5493_1.02 GMEB2 chr7 + 130943751 130943758 2.72e-05 1 TTACGTAA
M5493_1.02 GMEB2 chr7 - 130943751 130943758 2.72e-05 1 TTACGTAA
M5493_1.02 GMEB2 chr9 + 133121764 133121771 2.72e-05 1 ttacgtaa
M5493_1.02 GMEB2 chr9 - 133121764 133121771 2.72e-05 1 TTACGTAA
M5493_1.02 GMEB2 chr3 + 186570472 186570479 2.72e-05 1 TTACGTAA
M5493_1.02 GMEB2 chr3 - 186570472 186570479 2.72e-05 1 TTACGTAA
M5493_1.02 GMEB2 chr1 + 197470040 197470047 2.72e-05 1 TTACGTAA
M5493_1.02 GMEB2 chr1 - 197470040 197470047 2.72e-05 1 TTACGTAA
M5493_1.02 GMEB2 chr1 + 223679037 223679044 2.72e-05 1 ttacgtaa
M5493_1.02 GMEB2 chr1 - 223679037 223679044 2.72e-05 1 TTACGTAA
M5493_1.02 GMEB2 chr19 - 756698 756705 4.24e-05 1 GTGCGTAA
M5493_1.02 GMEB2 chr7 + 1412815 1412822 4.24e-05 1 GTGCGTAA
M5493_1.02 GMEB2 chr19 + 2977359 2977366 4.24e-05 1 GTGCGTAA
M5493_1.02 GMEB2 chr6 + 6659852 6659859 4.24e-05 1 gtgcgtaa
M5493_1.02 GMEB2 chr6 + 6659852 6659859 4.24e-05 1 gtgcgtaa
M5493_1.02 GMEB2 chr6 - 7166568 7166575 4.24e-05 1 GTGCGTAA
M5493_1.02 GMEB2 chr2 - 10272759 10272766 4.24e-05 1 GTGCGTAA
M5493_1.02 GMEB2 chr2 - 10272759 10272766 4.24e-05 1 GTGCGTAA
M5493_1.02 GMEB2 chr11 + 10809186 10809193 4.24e-05 1 GTGCGTAA
M5493_1.02 GMEB2 chr2 + 16620163 16620170 4.24e-05 1 gtgCGTAA
M5493_1.02 GMEB2 chr2 - 18745393 18745400 4.24e-05 1 GTGCGTAA
M5493_1.02 GMEB2 chr20 - 21096403 21096410 4.24e-05 1 GTGCGTAA
M5493_1.02 GMEB2 chr6 + 25992316 25992323 4.24e-05 1 GTGCGTAA
M5493_1.02 GMEB2 chr1 + 25998375 25998382 4.24e-05 1 GTGCGTAA
M5493_1.02 GMEB2 chr1 + 25998375 25998382 4.24e-05 1 GTGCGTAA
M5493_1.02 GMEB2 chr1 - 28369266 28369273 4.24e-05 1 GTGCGTAA
M5493_1.02 GMEB2 chr17 + 29069799 29069806 4.24e-05 1 GTGCGTAA
M5493_1.02 GMEB2 chr17 + 29069799 29069806 4.24e-05 1 GTGCGTAA
M5493_1.02 GMEB2 chr17 - 32141548 32141555 4.24e-05 1 GTGCGTAA
M5493_1.02 GMEB2 chr21 + 33965606 33965613 4.24e-05 1 GTGCGTAA
M5493_1.02 GMEB2 chr21 + 33965636 33965643 4.24e-05 1 GTGCGTAA
M5493_1.02 GMEB2 chr21 + 33965729 33965736 4.24e-05 1 GTGCGTAA
M5493_1.02 GMEB2 chr21 + 33965761 33965768 4.24e-05 1 GTGCGTAA
M5493_1.02 GMEB2 chr21 + 33965788 33965795 4.24e-05 1 GTGCGTAA
M5493_1.02 GMEB2 chr21 + 33965788 33965795 4.24e-05 1 GTGCGTAA
M5493_1.02 GMEB2 chr21 + 33965818 33965825 4.24e-05 1 GTGCGTAA
M5493_1.02 GMEB2 chr21 + 33965818 33965825 4.24e-05 1 GTGCGTAA
M5493_1.02 GMEB2 chr21 + 33965850 33965857 4.24e-05 1 GTGCGTAA
M5493_1.02 GMEB2 chr21 + 33965850 33965857 4.24e-05 1 GTGCGTAA
M5493_1.02 GMEB2 chr21 + 33965882 33965889 4.24e-05 1 GTGCGTAA
M5493_1.02 GMEB2 chr21 + 33965882 33965889 4.24e-05 1 GTGCGTAA
M5493_1.02 GMEB2 chr21 + 33965912 33965919 4.24e-05 1 GTGCGTAA
M5493_1.02 GMEB2 chr21 + 33965912 33965919 4.24e-05 1 GTGCGTAA
M5493_1.02 GMEB2 chr4 - 39182216 39182223 4.24e-05 1 GTGCGTAA
M5493_1.02 GMEB2 chr17 + 39927814 39927821 4.24e-05 1 GTGCGTAA
M5493_1.02 GMEB2 chr17 + 39927814 39927821 4.24e-05 1 GTGCGTAA
M5493_1.02 GMEB2 chr17 + 40140508 40140515 4.24e-05 1 GTGCGTAA
M5493_1.02 GMEB2 chr17 + 45146961 45146968 4.24e-05 1 gtgcgtaa
M5493_1.02 GMEB2 chr17 + 45146961 45146968 4.24e-05 1 gtgcgtaa
M5493_1.02 GMEB2 chr2 + 45242445 45242452 4.24e-05 1 GTGCGTAA
M5493_1.02 GMEB2 chr1 + 52913951 52913958 4.24e-05 1 GTGCGTAA
M5493_1.02 GMEB2 chr7 - 66592389 66592396 4.24e-05 1 GTGCGTAA
M5493_1.02 GMEB2 chr16 - 71289456 71289463 4.24e-05 1 GTGCGTAA
M5493_1.02 GMEB2 chr13 - 73602685 73602692 4.24e-05 1 GTGCGTAA
M5493_1.02 GMEB2 chr17 - 76406213 76406220 4.24e-05 1 GTGCGTAA
M5493_1.02 GMEB2 chr17 - 76406213 76406220 4.24e-05 1 GTGCGTAA
M5493_1.02 GMEB2 chr10 + 80408370 80408377 4.24e-05 1 GTGCGTAA
M5493_1.02 GMEB2 chr4 - 82374444 82374451 4.24e-05 1 GTGCGTAA
M5493_1.02 GMEB2 chr10 - 87095718 87095725 4.24e-05 1 GTGCGTAA
M5493_1.02 GMEB2 chr2 + 88691627 88691634 4.24e-05 1 GTGCGTAA
M5493_1.02 GMEB2 chr9 - 91193193 91193200 4.24e-05 1 GTGCGTAA
M5493_1.02 GMEB2 chr12 - 92404168 92404175 4.24e-05 1 GTGCGTAA
M5493_1.02 GMEB2 chr8 + 94949676 94949683 4.24e-05 1 GTGCGTAA
M5493_1.02 GMEB2 chr7 - 99616921 99616928 4.24e-05 1 GTGCGTAA
M5493_1.02 GMEB2 chr7 - 120950546 120950553 4.24e-05 1 GTGCGTAA
M5493_1.02 GMEB2 chr9 + 127608504 127608511 4.24e-05 1 GTGCGTAA
M5493_1.02 GMEB2 chr7 - 130962303 130962310 4.24e-05 1 GTGCGTAA
M5493_1.02 GMEB2 chr2 + 151826943 151826950 4.24e-05 1 gtgcgtAA
M5493_1.02 GMEB2 chr5 + 172573901 172573908 4.24e-05 1 GTGCGTAA
M5493_1.02 GMEB2 chr3 + 177198113 177198120 4.24e-05 1 GTGCGTAA
M5493_1.02 GMEB2 chr2 + 237964480 237964487 4.24e-05 1 gtgcgtaa
M5493_1.02 GMEB2 chr1 - 241990136 241990143 4.24e-05 1 GTGCGTAA
M5493_1.02 GMEB2 chr1 + 244393692 244393699 4.24e-05 1 gtgcgtaa
M5493_1.02 GMEB2 chr1 - 246152550 246152557 4.24e-05 1 GTGCGTAA
M5493_1.02 GMEB2 chr1 + 1001039 1001046 5.65e-05 1 TTGCGTAA
M5493_1.02 GMEB2 chr19 - 2346077 2346084 5.65e-05 1 TTGCGTAA
M5493_1.02 GMEB2 chr11 - 2739489 2739496 5.65e-05 1 TTGCGTAA
M5493_1.02 GMEB2 chr19 + 5966471 5966478 5.65e-05 1 TTGCGTAA
M5493_1.02 GMEB2 chr12 + 6891174 6891181 5.65e-05 1 TTGCGTAA
M5493_1.02 GMEB2 chr16 + 10362620 10362627 5.65e-05 1 TTGCGTAA
M5493_1.02 GMEB2 chr7 - 20219877 20219884 5.65e-05 1 TTGCGTAA
M5493_1.02 GMEB2 chr14 + 23035193 23035200 5.65e-05 1 TTGCGTAA
M5493_1.02 GMEB2 chr14 + 23164542 23164549 5.65e-05 1 ttgcgtaa
M5493_1.02 GMEB2 chr3 - 25784336 25784343 5.65e-05 1 TTGCGTAA
M5493_1.02 GMEB2 chr6 - 32177091 32177098 5.65e-05 1 TTGCGTAA
M5493_1.02 GMEB2 chr9 - 33290317 33290324 5.65e-05 1 TTGCGTAA
M5493_1.02 GMEB2 chr4 + 39515033 39515040 5.65e-05 1 ttgcgtaa
M5493_1.02 GMEB2 chr3 + 45842197 45842204 5.65e-05 1 TTGCGTAA
M5493_1.02 GMEB2 chr3 - 52455425 52455432 5.65e-05 1 TTGCGTAA
M5493_1.02 GMEB2 chr6 - 53545288 53545295 5.65e-05 1 TTGCGTAA
M5493_1.02 GMEB2 chr11 - 61357121 61357128 5.65e-05 1 TTGCGTAA
M5493_1.02 GMEB2 chr11 + 65498626 65498633 5.65e-05 1 TTGCGTAA
M5493_1.02 GMEB2 chr16 - 67246217 67246224 5.65e-05 1 TTGCGTAA
M5493_1.02 GMEB2 chr16 - 67246217 67246224 5.65e-05 1 TTGCGTAA
M5493_1.02 GMEB2 chr3 + 72086761 72086768 5.65e-05 1 ttgcgtaa
M5493_1.02 GMEB2 chr15 + 74610869 74610876 5.65e-05 1 TTGCGTAA
M5493_1.02 GMEB2 chr11 - 75475401 75475408 5.65e-05 1 TTGCGTAA
M5493_1.02 GMEB2 chr7 - 75741101 75741108 5.65e-05 1 TTGCGTAA
M5493_1.02 GMEB2 chr17 + 75855614 75855621 5.65e-05 1 TTGCGTAA
M5493_1.02 GMEB2 chr10 + 78033651 78033658 5.65e-05 1 TTGCGTAA
M5493_1.02 GMEB2 chr18 - 80010072 80010079 5.65e-05 1 TTGCGTAA
M5493_1.02 GMEB2 chr7 + 90403837 90403844 5.65e-05 1 TTGCGTAA
M5493_1.02 GMEB2 chr4 + 103019656 103019663 5.65e-05 1 TTGCGTAA
M5493_1.02 GMEB2 chr5 - 108531853 108531860 5.65e-05 1 TTGCGTAA
M5493_1.02 GMEB2 chr12 - 110403847 110403854 5.65e-05 1 TTGCGTAA
M5493_1.02 GMEB2 chr12 - 110403847 110403854 5.65e-05 1 TTGCGTAA
M5493_1.02 GMEB2 chr9 + 116465444 116465451 5.65e-05 1 TTGCGTAA
M5493_1.02 GMEB2 chr9 + 116465444 116465451 5.65e-05 1 TTGCGTAA
M5493_1.02 GMEB2 chr9 - 122905404 122905411 5.65e-05 1 TTGCGTAA
M5493_1.02 GMEB2 chr9 + 128786953 128786960 5.65e-05 1 TTGCGTAA
M5493_1.02 GMEB2 chr7 - 157401725 157401732 5.65e-05 1 TTGCGTAA
M5493_1.02 GMEB2 chr1 - 166989032 166989039 5.65e-05 1 TTGCGTAA
M5493_1.02 GMEB2 chr5 - 180806775 180806782 5.65e-05 1 TTGCGTAA
M5493_1.02 GMEB2 chr2 - 218270478 218270485 5.65e-05 1 TTGCGTAA
M5493_1.02 GMEB2 chr1 + 230708772 230708779 5.65e-05 1 TTGCGTAA
M5493_1.02 GMEB2 chr1 - 241945034 241945041 5.65e-05 1 TTGCGTAA
M5493_1.02 GMEB2 chr19 + 2524835 2524842 7.16e-05 1 GTACGTCA
M5493_1.02 GMEB2 chr19 + 2524835 2524842 7.16e-05 1 GTACGTCA
M5493_1.02 GMEB2 chr19 + 4791443 4791450 7.16e-05 1 GTACGTCA
M5493_1.02 GMEB2 chr6 + 14975637 14975644 7.16e-05 1 gtacgtca
M5493_1.02 GMEB2 chr20 - 16247259 16247266 7.16e-05 1 GTACGTCA
M5493_1.02 GMEB2 chr2 - 24009514 24009521 7.16e-05 1 GTACGTCA
M5493_1.02 GMEB2 chr6 - 25992232 25992239 7.16e-05 1 GTACGTCA
M5493_1.02 GMEB2 chr6 - 25992232 25992239 7.16e-05 1 GTACGTCA
M5493_1.02 GMEB2 chr17 - 27333484 27333491 7.16e-05 1 GTACGTCA
M5493_1.02 GMEB2 chr1 + 28544725 28544732 7.16e-05 1 gtacgtca
M5493_1.02 GMEB2 chr6 + 30617855 30617862 7.16e-05 1 GTACGTCA
M5493_1.02 GMEB2 chr6 + 31972321 31972328 7.16e-05 1 GTACGTCA
M5493_1.02 GMEB2 chr1 + 37595942 37595949 7.16e-05 1 GTACGTCA
M5493_1.02 GMEB2 chr1 - 38012638 38012645 7.16e-05 1 GTACGTCA
M5493_1.02 GMEB2 chr17 + 39927621 39927628 7.16e-05 1 GTACGTCA
M5493_1.02 GMEB2 chr8 - 41570056 41570063 7.16e-05 1 GTACGTCA
M5493_1.02 GMEB2 chr19 - 43437438 43437445 7.16e-05 1 GTACGTCA
M5493_1.02 GMEB2 chr22 - 45170054 45170061 7.16e-05 1 GTACGTCA
M5493_1.02 GMEB2 chr3 - 46509413 46509420 7.16e-05 1 GTACGTCA
M5493_1.02 GMEB2 chr3 - 46509413 46509420 7.16e-05 1 GTACGTCA
M5493_1.02 GMEB2 chr17 - 47867084 47867091 7.16e-05 1 GTACGTCA
M5493_1.02 GMEB2 chr12 - 50025549 50025556 7.16e-05 1 GTACGTCA
M5493_1.02 GMEB2 chr20 - 50335299 50335306 7.16e-05 1 GTACGTCA
M5493_1.02 GMEB2 chr1 - 51879009 51879016 7.16e-05 1 GTACGTCA
M5493_1.02 GMEB2 chr1 - 51879009 51879016 7.16e-05 1 GTACGTCA
M5493_1.02 GMEB2 chr12 - 64534978 64534985 7.16e-05 1 GTACGTCA
M5493_1.02 GMEB2 chr11 - 64916430 64916437 7.16e-05 1 GTACGTCA
M5493_1.02 GMEB2 chr5 + 73565740 73565747 7.16e-05 1 GTACGTCA
M5493_1.02 GMEB2 chr11 - 76731088 76731095 7.16e-05 1 GTACGTCA
M5493_1.02 GMEB2 chr16 + 84266872 84266879 7.16e-05 1 GTACGTCA
M5493_1.02 GMEB2 chr9 - 89311002 89311009 7.16e-05 1 GTACGTCA
M5493_1.02 GMEB2 chr1 - 93621253 93621260 7.16e-05 1 GTACGTCA
M5493_1.02 GMEB2 chr7 - 99257309 99257316 7.16e-05 1 GTACGTCA
M5493_1.02 GMEB2 chr7 + 100345073 100345080 7.16e-05 1 gtacgtca
M5493_1.02 GMEB2 chr12 - 109573275 109573282 7.16e-05 1 GTACGTCA
M5493_1.02 GMEB2 chr12 - 109573275 109573282 7.16e-05 1 GTACGTCA
M5493_1.02 GMEB2 chr9 - 112901324 112901331 7.16e-05 1 GTACGTCA
M5493_1.02 GMEB2 chr9 - 112901324 112901331 7.16e-05 1 GTACGTCA
M5493_1.02 GMEB2 chr12 + 122196850 122196857 7.16e-05 1 GTACGTCA
M5493_1.02 GMEB2 chr5 - 123423715 123423722 7.16e-05 1 GTACGTCA
M5493_1.02 GMEB2 chr8 - 123514622 123514629 7.16e-05 1 GTACGTCA
M5493_1.02 GMEB2 chr6 - 137170816 137170823 7.16e-05 1 GTACGTCA
M5493_1.02 GMEB2 chr7 - 139340642 139340649 7.16e-05 1 GTACGTCA
M5493_1.02 GMEB2 chr7 - 139340642 139340649 7.16e-05 1 GTACGTCA
M5493_1.02 GMEB2 chr2 - 159135337 159135344 7.16e-05 1 GTACGTCA
M5493_1.02 GMEB2 chr1 + 179882552 179882559 7.16e-05 1 GTACGTCA
M5493_1.02 GMEB2 chr2 + 180007102 180007109 7.16e-05 1 GTACGTCA
M5493_1.02 GMEB2 chr6 + 2800406 2800413 8.68e-05 1 GTACGTGA
M5493_1.02 GMEB2 chr16 + 3063038 3063045 8.68e-05 1 gtacgtga
M5493_1.02 GMEB2 chr19 - 4968625 4968632 8.68e-05 1 GTACGTGA
M5493_1.02 GMEB2 chr1 - 8879043 8879050 8.68e-05 1 GTACGTGA
M5493_1.02 GMEB2 chr7 + 16400029 16400036 8.68e-05 1 GTACGTGA
M5493_1.02 GMEB2 chr3 + 17076234 17076241 8.68e-05 1 GTACGTGA
M5493_1.02 GMEB2 chr19 - 18417892 18417899 8.68e-05 1 GTACGTGA
M5493_1.02 GMEB2 chr10 - 23047667 23047674 8.68e-05 1 GTACGTGA
M5493_1.02 GMEB2 chr2 + 26185071 26185078 8.68e-05 1 GTACGTGA
M5493_1.02 GMEB2 chr6 + 28489368 28489375 8.68e-05 1 GTACGTGA
M5493_1.02 GMEB2 chr6 - 30955962 30955969 8.68e-05 1 GTACGTGA
M5493_1.02 GMEB2 chr11 - 34371470 34371477 8.68e-05 1 GTACGTGA
M5493_1.02 GMEB2 chr19 - 36054340 36054347 8.68e-05 1 GTACGTGA
M5493_1.02 GMEB2 chr17 + 36535592 36535599 8.68e-05 1 GTACGTGA
M5493_1.02 GMEB2 chr8 + 41828431 41828438 8.68e-05 1 GTACGTGA
M5493_1.02 GMEB2 chr12 - 45728128 45728135 8.68e-05 1 GTACGTGA
M5493_1.02 GMEB2 chr11 - 47642392 47642399 8.68e-05 1 GTACGTGA
M5493_1.02 GMEB2 chr1 + 50970013 50970020 8.68e-05 1 GTACGTGA
M5493_1.02 GMEB2 chr4 - 54404092 54404099 8.68e-05 1 GTACGTGA
M5493_1.02 GMEB2 chr4 - 54404092 54404099 8.68e-05 1 GTACGTGA
M5493_1.02 GMEB2 chr1 - 54547249 54547256 8.68e-05 1 GTACGTGA
M5493_1.02 GMEB2 chr16 - 58630184 58630191 8.68e-05 1 GTACGTGA
M5493_1.02 GMEB2 chr2 - 61539393 61539400 8.68e-05 1 GTACGTGA
M5493_1.02 GMEB2 chr11 + 64304633 64304640 8.68e-05 1 GTACGTGA
M5493_1.02 GMEB2 chr10 + 70667327 70667334 8.68e-05 1 gtacgtga
M5493_1.02 GMEB2 chr17 - 81119766 81119773 8.68e-05 1 GTACGTGA
M5493_1.02 GMEB2 chr17 - 82339091 82339098 8.68e-05 1 GTACGTGA
M5493_1.02 GMEB2 chr15 + 84915096 84915103 8.68e-05 1 GTACGTGA
M5493_1.02 GMEB2 chr14 + 96195965 96195972 8.68e-05 1 gtacgtga
M5493_1.02 GMEB2 chr10 + 96829289 96829296 8.68e-05 1 gtacgtga
M5493_1.02 GMEB2 chr10 + 102056511 102056518 8.68e-05 1 gtacgtga
M5493_1.02 GMEB2 chr8 + 142545294 142545301 8.68e-05 1 GTACGTGA
M5493_1.02 GMEB2 chr7 - 151756214 151756221 8.68e-05 1 GTACGTGA
M5493_1.02 GMEB2 chr7 + 155206046 155206053 8.68e-05 1 gtacgtga
M5493_1.02 GMEB2 chr6 - 157980916 157980923 8.68e-05 1 GTACGTGA
M5493_1.02 GMEB2 chr6 + 168413142 168413149 8.68e-05 1 GTACGTGA
M5493_1.02 GMEB2 chr6 + 168413165 168413172 8.68e-05 1 GTACGTGA
M5493_1.02 GMEB2 chr6 + 168413197 168413204 8.68e-05 1 GTACGTGA
M5493_1.02 GMEB2 chr6 + 168413197 168413204 8.68e-05 1 GTACGTGA
M5493_1.02 GMEB2 chr6 + 168413293 168413300 8.68e-05 1 GTACGTGA
M5493_1.02 GMEB2 chr6 + 168413293 168413300 8.68e-05 1 GTACGTGA
M5493_1.02 GMEB2 chr6 + 168413325 168413332 8.68e-05 1 GTACGTGA
M5493_1.02 GMEB2 chr6 + 168413325 168413332 8.68e-05 1 GTACGTGA
M5493_1.02 GMEB2 chr5 + 180861957 180861964 8.68e-05 1 gtacgtga
M5493_1.02 GMEB2 chr2 - 216081609 216081616 8.68e-05 1 GTACGTGA
M5493_1.02 GMEB2 chr1 - 234125445 234125452 8.68e-05 1 GTACGTGA
M5493_1.02 GMEB2 chr1 + 236524594 236524601 8.68e-05 1 GTACGTGA

DEBUGGING INFORMATION

Command line:

/software/meme/4.12.0/bin/fimo --parse-genomic-coord --verbosity 1 --oc /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeK562eGFPComparisons/USF2.IDR0.05.filt.narrowPeak.summitPlusMinus250bp.MemeChipResultsDefaultMax/fimo_out_2 --bgfile /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeK562eGFPComparisons/USF2.IDR0.05.filt.narrowPeak.summitPlusMinus250bp.MemeChipResultsDefaultMax/background --motif M5493_1.02 /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/MotifData/motif_databases/CIS-BP/Homo_sapiens.meme /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeK562eGFPComparisons/USF2.IDR0.05.filt.narrowPeak.summitPlusMinus250bp.MemeChipResultsDefaultMax/USF2.IDR0.05.filt.narrowPeaksummitPlusMinus250bp.fa

Settings:

output_directory = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeK562eGFPComparisons/USF2.IDR0.05.filt.narrowPeak.summitPlusMinus250bp.MemeChipResultsDefaultMax/fimo_out_2 MEME file name = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/MotifData/motif_databases/CIS-BP/Homo_sapiens.meme sequence file name = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeK562eGFPComparisons/USF2.IDR0.05.filt.narrowPeak.summitPlusMinus250bp.MemeChipResultsDefaultMax/USF2.IDR0.05.filt.narrowPeaksummitPlusMinus250bp.fa
background file name = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeK562eGFPComparisons/USF2.IDR0.05.filt.narrowPeak.summitPlusMinus250bp.MemeChipResultsDefaultMax/background alphabet = DNA max stored scores = 100000
allow clobber = true compute q-values = true parse genomic coord. = true
text only = false scan both strands = true max strand = false
threshold type = p-value output theshold = 0.0001 pseudocount = 0.1
alpha = 1 verbosity = 1

This information can be useful in the event you wish to report a problem with the FIMO software.


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