Database and Motifs | High-scoring Motif Occurences | Debugging Information |
FIMO version 4.12.0, (Release date: Tue Jun 27 16:22:50 2017 -0700)
For further information on how to interpret these results or to get a copy of the FIMO software please access http://meme.nbcr.net
If you use FIMO in your research, please cite the following paper:
Charles E. Grant, Timothy L. Bailey, and William Stafford Noble,
"FIMO: Scanning for occurrences of a given motif",
Bioinformatics, 27(7):1017-1018, 2011.
[full text]
DATABASE /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeK562eGFPComparisons/TFDP1-Antibody.IDR0.05.filt.narrowPeak.summitPlusMinus250bp.MemeChipResultsDefaultMax/TFDP1-Antibody.IDR0.05.filt.narrowPeaksummitPlusMinus250bp.fa
Database contains 5617 sequences, 2808500 residues
MOTIFS /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeK562eGFPComparisons/TFDP1-Antibody.IDR0.05.filt.narrowPeak.summitPlusMinus250bp.MemeChipResultsDefaultMax/dreme_out/dreme.xml (DNA)
MOTIF | WIDTH | BEST POSSIBLE MATCH |
---|---|---|
AGRKGGCG | 8 | AGGGGGCG |
RGRAA | 5 | GGGAA |
CCACHAGR | 8 | CCACCAGG |
TTATYW | 6 | TTATCT |
RGGCGGGR | 8 | GGGCGGGG |
AGRKGGCA | 8 | AGGGGGCA |
RGGTTCGA | 8 | GGGTTCGA |
ACTTCCG | 7 | ACTTCCG |
CTCCCKC | 7 | CTCCCTC |
ATTGGCYG | 8 | ATTGGCTG |
BCACGTG | 7 | CCACGTG |
RRTTTGAA | 8 | GGTTTGAA |
TGACGTCA | 8 | TGACGTCA |
CGCAKGCG | 8 | CGCAGGCG |
HGGCCACA | 8 | TGGCCACA |
CWGCAGC | 7 | CAGCAGC |
STGAGTCA | 8 | CTGAGTCA |
GCTCYACC | 8 | GCTCCACC |
GCDGGGA | 7 | GCAGGGA |
TGGWTAA | 7 | TGGTTAA |
CCGCCDCC | 8 | CCGCCGCC |
GGACAS | 6 | GGACAG |
CCACGCCC | 8 | CCACGCCC |
AAAATGKC | 8 | AAAATGGC |
AAYTACA | 7 | AACTACA |
CTGAGCTA | 8 | CTGAGCTA |
Random model letter frequencies (/srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeK562eGFPComparisons/TFDP1-Antibody.IDR0.05.filt.narrowPeak.summitPlusMinus250bp.MemeChipResultsDefaultMax/background):
A 0.206 C 0.294 G 0.294 T 0.206
Motif ID | Alt ID | Sequence Name | Strand | Start | End | p-value | q-value | Matched Sequence |
---|---|---|---|---|---|---|---|---|
TGACGTCA | DREME-13 | chr19 | + | 734064 | 734071 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr19 | - | 734064 | 734071 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr17 | + | 782321 | 782328 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr17 | - | 782321 | 782328 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr19 | + | 1021682 | 1021689 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr19 | - | 1021682 | 1021689 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr16 | + | 1706087 | 1706094 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr16 | - | 1706087 | 1706094 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr19 | + | 1940773 | 1940780 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr19 | - | 1940773 | 1940780 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr16 | + | 2268113 | 2268120 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr16 | - | 2268113 | 2268120 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr18 | + | 2571530 | 2571537 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr18 | - | 2571530 | 2571537 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr6 | + | 3157596 | 3157603 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr6 | - | 3157596 | 3157603 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr3 | + | 5023522 | 5023529 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr3 | - | 5023522 | 5023529 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr19 | + | 5031581 | 5031588 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr19 | - | 5031581 | 5031588 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr17 | + | 7205283 | 7205290 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr17 | - | 7205283 | 7205290 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr1 | + | 9428983 | 9428990 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr1 | - | 9428983 | 9428990 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr19 | + | 9621247 | 9621254 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr19 | - | 9621247 | 9621254 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr3 | + | 9986854 | 9986861 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr3 | - | 9986854 | 9986861 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr19 | + | 10252181 | 10252188 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr19 | - | 10252181 | 10252188 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr19 | + | 10416769 | 10416776 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr19 | - | 10416769 | 10416776 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr12 | + | 10613590 | 10613597 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr12 | - | 10613590 | 10613597 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr18 | + | 11851366 | 11851373 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr18 | + | 11851366 | 11851373 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr18 | - | 11851366 | 11851373 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr18 | - | 11851366 | 11851373 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr10 | + | 13161528 | 13161535 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr10 | - | 13161528 | 13161535 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr19 | + | 14006828 | 14006835 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr19 | - | 14006828 | 14006835 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr19 | + | 14006906 | 14006913 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr19 | - | 14006906 | 14006913 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr1 | + | 17054028 | 17054035 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr1 | - | 17054028 | 17054035 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr4 | + | 17577094 | 17577101 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr4 | - | 17577094 | 17577101 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr20 | + | 17968855 | 17968862 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr20 | - | 17968855 | 17968862 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr22 | + | 19144779 | 19144786 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr22 | - | 19144779 | 19144786 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr6 | + | 19804830 | 19804837 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr6 | - | 19804830 | 19804837 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr14 | + | 20343620 | 20343627 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr14 | - | 20343620 | 20343627 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr1 | + | 22052663 | 22052670 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr1 | - | 22052663 | 22052670 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr8 | + | 22109696 | 22109703 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr8 | - | 22109696 | 22109703 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr8 | + | 22109762 | 22109769 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr8 | - | 22109762 | 22109769 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr7 | + | 23181974 | 23181981 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr7 | - | 23181974 | 23181981 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr7 | + | 25125537 | 25125544 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr7 | - | 25125537 | 25125544 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr6 | + | 26026383 | 26026390 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr6 | - | 26026383 | 26026390 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr6 | + | 26032254 | 26032261 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr6 | - | 26032254 | 26032261 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr1 | + | 26169845 | 26169852 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr1 | - | 26169845 | 26169852 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr6 | + | 26285657 | 26285664 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr6 | - | 26285657 | 26285664 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr6 | + | 27146949 | 27146956 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr6 | - | 27146949 | 27146956 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr10 | + | 27155315 | 27155322 | 1.35e-05 | 0.252 | tgacgtca |
TGACGTCA | DREME-13 | chr10 | - | 27155315 | 27155322 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr6 | + | 27472929 | 27472936 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr6 | - | 27472929 | 27472936 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr6 | + | 28081191 | 28081198 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr6 | + | 28081191 | 28081198 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr6 | - | 28081191 | 28081198 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr6 | - | 28081191 | 28081198 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr1 | + | 28328833 | 28328840 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr1 | - | 28328833 | 28328840 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr6 | + | 28896413 | 28896420 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr6 | - | 28896413 | 28896420 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr6 | + | 30061189 | 30061196 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr6 | - | 30061189 | 30061196 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr22 | + | 31944365 | 31944372 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr22 | - | 31944365 | 31944372 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr6 | + | 31971963 | 31971970 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr6 | - | 31971963 | 31971970 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr20 | + | 32109709 | 32109716 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr20 | - | 32109709 | 32109716 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr6 | + | 32196588 | 32196595 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr6 | - | 32196588 | 32196595 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr6 | + | 32971996 | 32972003 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr6 | - | 32971996 | 32972003 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr9 | + | 33001634 | 33001641 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr9 | - | 33001634 | 33001641 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr9 | + | 33001665 | 33001672 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr9 | - | 33001665 | 33001672 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr11 | + | 33161627 | 33161634 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr11 | - | 33161627 | 33161634 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr9 | + | 33290409 | 33290416 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr9 | - | 33290409 | 33290416 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr18 | + | 35041355 | 35041362 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr18 | - | 35041355 | 35041362 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr6 | + | 35259455 | 35259462 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr6 | - | 35259455 | 35259462 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr19 | + | 35545556 | 35545563 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr19 | - | 35545556 | 35545563 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr17 | + | 35587235 | 35587242 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr17 | - | 35587235 | 35587242 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr17 | + | 35587258 | 35587265 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr17 | - | 35587258 | 35587265 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr19 | + | 35612704 | 35612711 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr19 | - | 35612704 | 35612711 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr19 | + | 35612727 | 35612734 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr19 | - | 35612727 | 35612734 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr20 | + | 35615766 | 35615773 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr20 | - | 35615766 | 35615773 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr20 | + | 35615829 | 35615836 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr20 | + | 35615829 | 35615836 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr20 | - | 35615829 | 35615836 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr20 | - | 35615829 | 35615836 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr1 | + | 36089046 | 36089053 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr1 | - | 36089046 | 36089053 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr20 | + | 36605626 | 36605633 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr20 | - | 36605626 | 36605633 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr1 | + | 38991237 | 38991244 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr1 | - | 38991237 | 38991244 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr4 | + | 39366377 | 39366384 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr4 | - | 39366377 | 39366384 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr17 | + | 39402668 | 39402675 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr17 | - | 39402668 | 39402675 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr15 | + | 40755253 | 40755260 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr15 | - | 40755253 | 40755260 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chrX | + | 41084781 | 41084788 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chrX | - | 41084781 | 41084788 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr17 | + | 42388843 | 42388850 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr17 | - | 42388843 | 42388850 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr15 | + | 42548792 | 42548799 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr15 | - | 42548792 | 42548799 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr19 | + | 44500789 | 44500796 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr19 | - | 44500789 | 44500796 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr3 | + | 44729601 | 44729608 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr3 | - | 44729601 | 44729608 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr3 | + | 44761671 | 44761678 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr3 | - | 44761671 | 44761678 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr19 | + | 45443518 | 45443525 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr19 | - | 45443518 | 45443525 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr20 | + | 45972412 | 45972419 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr20 | + | 45972412 | 45972419 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr20 | - | 45972412 | 45972419 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr20 | - | 45972412 | 45972419 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr1 | + | 46446802 | 46446809 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr1 | - | 46446802 | 46446809 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr19 | + | 48661254 | 48661261 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr19 | - | 48661254 | 48661261 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr17 | + | 48892729 | 48892736 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr17 | - | 48892729 | 48892736 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr19 | + | 49145680 | 49145687 | 1.35e-05 | 0.252 | tgacgtca |
TGACGTCA | DREME-13 | chr19 | - | 49145680 | 49145687 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr19 | + | 50511559 | 50511566 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr19 | + | 50511559 | 50511566 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr19 | - | 50511559 | 50511566 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr19 | - | 50511559 | 50511566 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr19 | + | 50679562 | 50679569 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr19 | - | 50679562 | 50679569 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr19 | + | 50870585 | 50870592 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr19 | - | 50870585 | 50870592 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr10 | + | 51699918 | 51699925 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr10 | - | 51699918 | 51699925 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr19 | + | 55503914 | 55503921 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr19 | - | 55503914 | 55503921 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr17 | + | 58692571 | 58692578 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr17 | - | 58692571 | 58692578 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr11 | + | 62622204 | 62622211 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr11 | - | 62622204 | 62622211 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr10 | + | 63133239 | 63133246 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr10 | - | 63133239 | 63133246 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr17 | + | 63773792 | 63773799 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr17 | + | 63773792 | 63773799 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr17 | - | 63773792 | 63773799 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr17 | - | 63773792 | 63773799 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr11 | + | 65422253 | 65422260 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr11 | - | 65422253 | 65422260 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr7 | + | 66844987 | 66844994 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr7 | + | 66844987 | 66844994 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr7 | - | 66844987 | 66844994 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr7 | - | 66844987 | 66844994 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr7 | + | 67302581 | 67302588 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr7 | - | 67302581 | 67302588 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr4 | + | 68350179 | 68350186 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr4 | - | 68350179 | 68350186 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr2 | + | 70142705 | 70142712 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr2 | - | 70142705 | 70142712 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr10 | + | 74176873 | 74176880 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr10 | - | 74176873 | 74176880 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr16 | + | 75623291 | 75623298 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr16 | - | 75623291 | 75623298 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr4 | + | 75673640 | 75673647 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr4 | - | 75673640 | 75673647 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr17 | + | 75785023 | 75785030 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr17 | - | 75785023 | 75785030 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr7 | + | 76166618 | 76166625 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr7 | - | 76166618 | 76166625 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr11 | + | 87352829 | 87352836 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr11 | - | 87352829 | 87352836 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr16 | + | 88706407 | 88706414 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr16 | - | 88706407 | 88706414 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr15 | + | 90994704 | 90994711 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr15 | - | 90994704 | 90994711 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr9 | + | 94166836 | 94166843 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr9 | - | 94166836 | 94166843 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr9 | + | 97633364 | 97633371 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr9 | - | 97633364 | 97633371 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr10 | + | 97737099 | 97737106 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr10 | - | 97737099 | 97737106 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr7 | + | 100336043 | 100336050 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr7 | - | 100336043 | 100336050 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr7 | + | 100867326 | 100867333 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr7 | - | 100867326 | 100867333 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr8 | + | 100952113 | 100952120 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr8 | - | 100952113 | 100952120 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr7 | + | 101165640 | 101165647 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr7 | - | 101165640 | 101165647 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr10 | + | 102152146 | 102152153 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr10 | - | 102152146 | 102152153 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr4 | + | 103198449 | 103198456 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr4 | - | 103198449 | 103198456 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr9 | + | 108934134 | 108934141 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr9 | - | 108934134 | 108934141 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr1 | + | 109984674 | 109984681 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr1 | - | 109984674 | 109984681 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr12 | + | 111841970 | 111841977 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr12 | - | 111841970 | 111841977 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr7 | + | 112450407 | 112450414 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr7 | - | 112450407 | 112450414 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr4 | + | 112636899 | 112636906 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr4 | - | 112636899 | 112636906 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr11 | + | 117986346 | 117986353 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr11 | - | 117986346 | 117986353 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr4 | + | 121823956 | 121823963 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr4 | - | 121823956 | 121823963 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr6 | + | 126340002 | 126340009 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr6 | - | 126340002 | 126340009 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr3 | + | 128879461 | 128879468 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr3 | - | 128879461 | 128879468 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr9 | + | 128882104 | 128882111 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr9 | - | 128882104 | 128882111 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr9 | + | 129777265 | 129777272 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr9 | - | 129777265 | 129777272 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr12 | + | 132144431 | 132144438 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr12 | - | 132144431 | 132144438 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr8 | + | 134832390 | 134832397 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr8 | - | 134832390 | 134832397 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr6 | + | 135497768 | 135497775 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr6 | + | 135497768 | 135497775 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr6 | - | 135497768 | 135497775 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr6 | - | 135497768 | 135497775 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr7 | + | 140925022 | 140925029 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr7 | - | 140925022 | 140925029 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr3 | + | 140941718 | 140941725 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr3 | - | 140941718 | 140941725 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr5 | + | 146182803 | 146182810 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr5 | - | 146182803 | 146182810 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr7 | + | 152676268 | 152676275 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr7 | - | 152676268 | 152676275 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr1 | + | 156505442 | 156505449 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr1 | - | 156505442 | 156505449 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr3 | + | 157160225 | 157160232 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr3 | - | 157160225 | 157160232 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr7 | + | 158829627 | 158829634 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr7 | - | 158829627 | 158829634 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr5 | + | 176416582 | 176416589 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr5 | - | 176416582 | 176416589 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr3 | + | 194315648 | 194315655 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr3 | - | 194315648 | 194315655 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr1 | + | 212035730 | 212035737 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr1 | - | 212035730 | 212035737 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr1 | + | 223081374 | 223081381 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr1 | - | 223081374 | 223081381 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr1 | + | 223992643 | 223992650 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr1 | - | 223992643 | 223992650 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr1 | + | 228103344 | 228103351 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr1 | - | 228103344 | 228103351 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr1 | + | 229508355 | 229508362 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr1 | - | 229508355 | 229508362 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr1 | + | 241848149 | 241848156 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr1 | - | 241848149 | 241848156 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr1 | + | 244863141 | 244863148 | 1.35e-05 | 0.252 | TGACGTCA |
TGACGTCA | DREME-13 | chr1 | - | 244863141 | 244863148 | 1.35e-05 | 0.252 | TGACGTCA |
Command line:
/software/meme/4.12.0/bin/fimo --parse-genomic-coord --verbosity 1 --oc /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeK562eGFPComparisons/TFDP1-Antibody.IDR0.05.filt.narrowPeak.summitPlusMinus250bp.MemeChipResultsDefaultMax/fimo_out_27 --bgfile /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeK562eGFPComparisons/TFDP1-Antibody.IDR0.05.filt.narrowPeak.summitPlusMinus250bp.MemeChipResultsDefaultMax/background --motif TGACGTCA /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeK562eGFPComparisons/TFDP1-Antibody.IDR0.05.filt.narrowPeak.summitPlusMinus250bp.MemeChipResultsDefaultMax/dreme_out/dreme.xml /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeK562eGFPComparisons/TFDP1-Antibody.IDR0.05.filt.narrowPeak.summitPlusMinus250bp.MemeChipResultsDefaultMax/TFDP1-Antibody.IDR0.05.filt.narrowPeaksummitPlusMinus250bp.fa
Settings:
output_directory = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeK562eGFPComparisons/TFDP1-Antibody.IDR0.05.filt.narrowPeak.summitPlusMinus250bp.MemeChipResultsDefaultMax/fimo_out_27 | MEME file name = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeK562eGFPComparisons/TFDP1-Antibody.IDR0.05.filt.narrowPeak.summitPlusMinus250bp.MemeChipResultsDefaultMax/dreme_out/dreme.xml | sequence file name = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeK562eGFPComparisons/TFDP1-Antibody.IDR0.05.filt.narrowPeak.summitPlusMinus250bp.MemeChipResultsDefaultMax/TFDP1-Antibody.IDR0.05.filt.narrowPeaksummitPlusMinus250bp.fa |
background file name = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeK562eGFPComparisons/TFDP1-Antibody.IDR0.05.filt.narrowPeak.summitPlusMinus250bp.MemeChipResultsDefaultMax/background | alphabet = DNA | max stored scores = 100000 |
allow clobber = true | compute q-values = true | parse genomic coord. = true |
text only = false | scan both strands = true | max strand = false |
threshold type = p-value | output theshold = 0.0001 | pseudocount = 0.1 |
alpha = 1 | verbosity = 1 |
This information can be useful in the event you wish to report a problem with the FIMO software.