# WARNING: this file is not sorted! # db id alt consensus E-value adj_p-value log_adj_p-value bin_location bin_width total_width sites_in_bin total_sites p_success p-value mult_tests 1 SYGCCMYCTGSTGGYC MEME-1 SYGCCMYCTGSTGGYC 4.6e-483 6.1e-486 -1117.25 0.0 41 485 1436 4126 0.08454 2.5e-488 242 1 AACCCRSGAYCYYCWGMTYASDAGKCWGRYGCTYTA MEME-2 AACCCRSGAYCYYCWGMTYASDAGKCWGRYGCTYTA 4.9e-052 6.4e-055 -124.79 0.0 73 465 97 118 0.15699 2.7e-057 232 1 GRRGDCSYGGGTTCGAWTCCC MEME-3 GRRGDCSYGGGTTCGAWTCCC 5.7e-041 7.5e-044 -99.30 0.0 124 480 174 253 0.25833 3.1e-046 239 2 AGRKGGCG DREME-1 AGRKGGCG 1.8e-152 2.3e-155 -356.06 0.0 59 493 601 1563 0.11968 9.4e-158 246 2 CCACHAGR DREME-3 CCACCAGR 8.5e-149 1.1e-151 -347.58 0.0 49 493 472 1232 0.09939 4.5e-154 246 2 RGGCGGGR DREME-5 GGGCGGGR 8.4e-008 1.1e-010 -22.92 0.0 189 493 955 2074 0.38337 4.5e-013 246 2 AGRKGGCA DREME-6 AGRKGGCA 2.8e-125 3.6e-128 -293.44 0.0 39 493 363 1065 0.07911 1.5e-130 246 2 RGGTTCGA DREME-7 GGGTTCGA 1.5e-030 2.0e-033 -75.30 0.0 121 493 133 200 0.24544 8.1e-036 246 2 ACTTCCG DREME-8 ACTTCCG 7.8e-009 1.0e-011 -25.31 0.0 224 494 310 500 0.45344 4.1e-014 246 2 CTCCCKC DREME-9 CTCCCKC 1.5e-010 1.9e-013 -29.27 0.0 152 494 918 2385 0.30769 7.9e-016 246 2 ATTGGCYG DREME-10 ATTGGCTG 5.9e-006 7.7e-009 -18.68 0.0 161 493 150 292 0.32657 3.1e-011 246 2 BCACGTG DREME-11 BCACGTG 2.3e-004 3.0e-007 -15.02 0.0 132 494 261 705 0.26721 1.2e-009 246 2 RRTTTGAA DREME-12 RRTTTGAA 9.1e0000 1.2e-002 -4.43 0.0 85 493 102 408 0.17241 4.9e-005 246 2 CGCAKGCG DREME-14 CGCAGGCG 2.3e-003 3.0e-006 -12.72 0.0 319 493 397 521 0.64706 1.2e-008 246 2 HGGCCACA DREME-15 HGGCCACA 2.4e-004 3.2e-007 -14.97 0.0 97 493 188 634 0.19675 1.3e-009 246 2 CWGCAGC DREME-16 CWGCAGC 8.7e-008 1.1e-010 -22.90 0.0 168 494 898 2169 0.34008 4.6e-013 246 2 STGAGTCA DREME-17 STGAGTCA 3.1e0000 4.1e-003 -5.50 0.0 157 493 146 342 0.31846 1.7e-005 246 2 GCTCYACC DREME-18 GCTCYACC 3.2e-013 4.2e-016 -35.41 0.0 113 493 160 367 0.22921 1.7e-018 246 2 CCGCCDCC DREME-21 CCGCCKCC 4.0e-003 5.2e-006 -12.17 0.0 211 493 780 1569 0.42799 2.1e-008 246 2 GGACAS DREME-22 GGACAS 4.3e0000 5.6e-003 -5.18 0.0 97 495 672 2968 0.19596 2.3e-005 247 2 CCACGCCC DREME-23 CCACGCCC 4.6e0000 6.0e-003 -5.11 0.0 201 493 215 425 0.40771 2.5e-005 246 3 M0085_1.02 (TFAP2E)_(Mus_musculus)_(DBD_0.99) THGCCYSVGG 3.0e-002 3.9e-005 -10.16 0.0 179 491 2189 5500 0.36456 1.6e-007 245 3 M0178_1.02 (ASCL2)_(Mus_musculus)_(DBD_0.98) NVCAGCTGBN 2.2e-003 2.9e-006 -12.76 0.0 101 491 1233 5186 0.20570 1.2e-008 245 3 M0189_1.02 (ID2)_(Mus_musculus)_(DBD_0.98) RCACGTGR 5.5e-002 7.2e-005 -9.54 0.0 97 493 1056 4662 0.19675 2.9e-007 246 3 M0196_1.02 (NPAS2)_(Mus_musculus)_(DBD_1.00) NSCACGTGTN 2.4e-001 3.1e-004 -8.08 0.0 133 491 1364 4509 0.27088 1.3e-006 245 3 M0198_1.02 (SOHLH2)_(Mus_musculus)_(DBD_0.84) NGYVCGTGCN 4.0e-002 5.3e-005 -9.85 0.0 343 491 3856 5280 0.69857 2.1e-007 245 3 M0211_1.02 (MLXIP)_(Mus_musculus)_(DBD_0.82) BCACGTGK 1.3e-005 1.7e-008 -17.89 0.0 97 493 1109 4725 0.19675 6.9e-011 246 3 M0212_1.02 (TCFL5)_(Mus_musculus)_(DBD_1.00) NBCDCGHGVN 2.0e-038 2.6e-041 -93.46 0.0 81 491 987 3915 0.16497 1.0e-043 245 3 M0305_1.02 (CREB3L2)_(Mus_musculus)_(DBD_1.00) GCCACGTGD 1.4e-007 1.8e-010 -22.44 0.0 46 492 522 4095 0.09350 7.3e-013 245 3 M0405_1.02 (KLF7)_(Mus_musculus)_(DBD_1.00) DGGGCGKGGY 1.2e-010 1.6e-013 -29.47 0.0 229 491 2889 5555 0.46640 6.5e-016 245 3 M0413_1.02 (ZBTB1)_(Mus_musculus)_(DBD_0.99) NDTGCGKGDN 1.5e-006 2.0e-009 -20.04 0.0 187 491 2235 5240 0.38086 8.1e-012 245 3 M0422_1.02 (ZIC5)_(Mus_musculus)_(DBD_0.99) SYRGGGGGTM 1.1e-018 1.5e-021 -47.96 0.0 23 491 433 5565 0.04684 6.1e-024 245 3 M0432_1.02 (ZFP161)_(Mus_musculus)_(DBD_1.00) NNCGYGCHH 2.5e-030 3.3e-033 -74.79 0.0 98 492 1056 3714 0.19919 1.3e-035 245 3 M0442_1.02 (ZBTB3)_(Mus_musculus)_(DBD_1.00) NNTGCAGYG 8.9e-001 1.2e-003 -6.75 0.0 42 492 573 5597 0.08537 4.8e-006 245 3 M0443_1.02 (KLF12)_(Mus_musculus)_(DBD_1.00) DGGGCGKGKY 5.1e-012 6.7e-015 -32.64 0.0 229 491 2908 5564 0.46640 2.7e-017 245 3 M0608_1.02 MLL NNNRSCGNDN 2.2e-001 2.9e-004 -8.16 0.0 81 491 690 3534 0.16497 1.2e-006 245 3 M0609_1.02 DNMT1 NNCCGCNNNN 9.0e-025 1.2e-027 -62.01 0.0 143 491 1608 4328 0.29124 4.8e-030 245 3 M1359_1.02 (MYPOP)_(Mus_musculus)_(DBD_0.97) NWTTGCGCCR 1.3e-009 1.7e-012 -27.13 0.0 175 491 1840 4463 0.35642 6.8e-015 245 3 M1545_1.02 GMEB1 NNNRCGTNN 9.8e0000 1.3e-002 -4.36 0.0 420 492 3622 4141 0.85366 5.3e-005 245 3 M1871_1.02 (KLF2)_(Mus_musculus)_(DBD_0.95) DGGGYGKGGC 1.7e-006 2.2e-009 -19.92 0.0 231 491 2795 5414 0.47047 9.1e-012 245 3 M1906_1.02 SP1 GGGGGMGGGGC 9.3e-002 1.2e-004 -9.01 0.0 228 490 2720 5457 0.46531 5.0e-007 244 3 M1917_1.02 USF1 GGTCACRTGRB 7.7e-002 1.0e-004 -9.20 0.0 42 490 469 4366 0.08571 4.2e-007 244 3 M1927_1.02 (MYCL1)_(Mus_musculus)_(DBD_0.66) RCCACGTG 1.5e-017 2.0e-020 -45.35 0.0 65 493 860 4718 0.13185 8.2e-023 246 3 M1963_1.02 (ZFY)_(Mus_musculus)_(DBD_0.97) SSSGSCBVGGCCTS 5.6e-006 7.3e-009 -18.73 0.0 133 487 1664 5302 0.27310 3.0e-011 243 3 M1968_1.02 EBF1 TCCCWGGGGRV 3.0e0000 4.0e-003 -5.52 0.0 188 490 2213 5379 0.38367 1.6e-005 244 3 M2264_1.02 (ATOH1)_(Mus_musculus)_(DBD_1.00) RCCAKCTG 3.8e-038 4.9e-041 -92.81 0.0 51 493 887 5375 0.10345 2.0e-043 246 3 M2273_1.02 E2F6 RGGCGGGARRV 3.8e-033 4.9e-036 -81.29 0.0 80 490 1273 5515 0.16327 2.0e-038 244 3 M2299_1.02 (MYF5)_(Mus_musculus)_(DBD_0.90) NRNRRCAGCTGSN 3.1e-003 4.0e-006 -12.42 0.0 92 488 1172 5357 0.18852 1.7e-008 243 3 M2305_1.02 NRF1 YGCGCABGCGC 2.0e-020 2.7e-023 -51.98 0.0 104 490 1126 3990 0.21224 1.1e-025 244 3 M2314_1.02 SP2 SSSVRGRGGCGGGRC 1.6e-007 2.1e-010 -22.29 0.0 216 486 2667 5418 0.44444 8.6e-013 242 3 M2323_1.02 ZBTB33 SARVTCTCGCGAGAV 1.3e-016 1.7e-019 -43.19 0.0 60 486 658 3697 0.12346 7.2e-022 242 3 M2391_1.02 KLF5 DGGGHGGGGC 2.9e-004 3.8e-007 -14.77 0.0 227 491 2766 5506 0.46232 1.6e-009 245 3 M4427_1.02 CTCF NYGGCCASCAGRKGGCRSYVB 6.2e-480 8.1e-483 -1110.06 0.0 40 480 1577 4962 0.08333 3.4e-485 239 3 M4451_1.02 ATF3 GGTCACGTGRS 2.4e-002 3.1e-005 -10.37 0.0 62 490 605 3904 0.12653 1.3e-007 244 3 M4454_1.02 BRCA1 ARVTCTCGCGAGAVB 7.0e-005 9.1e-008 -16.21 0.0 76 486 519 2565 0.15638 3.8e-010 242 3 M4459_1.02 EGR1 SBGCGKGGGCGGVGGSGSGS 1.7e-001 2.3e-004 -8.39 0.0 263 481 2807 4832 0.54678 9.5e-007 240 3 M4462_1.02 GABPA VVCCGGAAGTG 7.6e-010 1.0e-012 -27.63 0.0 158 490 1962 5257 0.32245 4.1e-015 244 3 M4479_1.02 TCF12 VSAGCAGSTGB 8.8e-008 1.2e-010 -22.88 0.0 98 490 1296 5405 0.20000 4.8e-013 244 3 M4481_1.02 USF2 GGTCACGTGRSSSSV 3.2e-007 4.1e-010 -21.60 0.0 144 486 1295 3707 0.29630 1.7e-012 242 3 M4522_1.02 ELK4 CCGGAAGYGS 1.4e-008 1.9e-011 -24.69 0.0 153 491 1947 5429 0.31161 7.7e-014 245 3 M4525_1.02 TFAP2C NGCCYSAGGSCANDB 1.9e-003 2.5e-006 -12.92 0.0 180 486 2158 5290 0.37037 1.0e-008 242 3 M4532_1.02 MYC CCACGTGSYY 1.5e-020 2.0e-023 -52.28 0.0 45 491 678 4934 0.09165 8.1e-026 245 3 M4536_1.02 E2F1 VRRVRGVGCGCGCRS 5.0e-064 6.6e-067 -152.39 0.0 130 486 1878 4908 0.26749 2.7e-069 242 3 M4537_1.02 E2F4 SGCGGGAARWTBVRR 1.2e-072 1.6e-075 -172.24 0.0 82 486 1425 5242 0.16872 6.5e-078 242 3 M4543_1.02 MXI1 VVVVCCACGTG 3.9e-012 5.1e-015 -32.91 0.0 108 490 1281 4696 0.22041 2.1e-017 244 3 M4569_1.02 HSF1 GTCSYGGGTTCGADTCCC 6.1e-005 8.0e-008 -16.34 0.0 17 483 132 2091 0.03520 3.3e-010 241 3 M4612_1.02 CTCFL CCRSCAGGGGGCGCY 2.3e-452 3.0e-455 -1046.59 0.0 44 486 1626 5084 0.09053 1.2e-457 242 3 M4640_1.02 ZBTB7A GGGSRRGGGKCBSBG 3.9e-005 5.1e-008 -16.79 0.0 8 486 154 5419 0.01646 2.1e-010 242 3 M5116_1.02 (ATOH8)_(Drosophila_melanogaster)_(DBD_0.70) RCCACCTGK 2.6e-012 3.4e-015 -33.32 0.0 44 492 674 5435 0.08943 1.4e-017 245 3 M5209_1.02 (SP5)_(Drosophila_melanogaster)_(DBD_0.93) GKGGGCGKRKC 1.0e-006 1.3e-009 -20.45 0.0 234 490 2804 5350 0.47755 5.4e-012 244 3 M5363_1.02 E2F8 TTTCCCGCCAAA 2.6e-014 3.4e-017 -37.91 0.0 91 489 614 2344 0.18609 1.4e-019 244 3 M5398_1.02 ERF ACCGGAAGTR 4.6e-004 6.0e-007 -14.33 0.0 315 491 3420 5023 0.64155 2.4e-009 245 3 M5420_1.02 ETV1 ACCGGAAGTD 1.1e0000 1.4e-003 -6.57 0.0 337 491 3778 5289 0.68635 5.7e-006 245 3 M5422_1.02 ETV3 ACCGGAAGTR 8.4e-001 1.1e-003 -6.81 0.0 357 491 3884 5148 0.72709 4.5e-006 245 3 M5425_1.02 ETV6 CCGGAASCGGAAGYR 3.7e0000 4.8e-003 -5.34 0.0 262 486 1986 3460 0.53909 2.0e-005 242 3 M5430_1.02 FIGLA WMCACCTGKW 4.2e0000 5.5e-003 -5.20 0.0 53 491 671 5335 0.10794 2.3e-005 245 3 M5491_1.02 GLIS2 CDYYGCGGGGGGTC 1.3e-002 1.7e-005 -10.97 0.0 151 487 1318 3761 0.31006 7.1e-008 243 3 M5506_1.02 HES7 YGGCACGTGCCR 1.4e0000 1.8e-003 -6.32 0.0 85 489 321 1471 0.17382 7.4e-006 244 3 M5509_1.02 HEY1 GRCACGTGBC 2.9e-012 3.8e-015 -33.20 0.0 95 491 997 4023 0.19348 1.6e-017 245 3 M5591_1.02 KLF13 CAAAAAGGGGCGTGKCAY 3.6e-001 4.8e-004 -7.65 0.0 35 483 275 2866 0.07246 2.0e-006 241 3 M5592_1.02 KLF14 ARGKGGGCGTGGYM 9.9e-007 1.3e-009 -20.46 0.0 257 487 2690 4659 0.52772 5.4e-012 243 3 M5593_1.02 KLF16 GGGGGCGTGKC 1.2e-001 1.6e-004 -8.72 0.0 282 490 3214 5283 0.57551 6.7e-007 244 3 M5634_1.02 MNT VVCACGTGVH 2.0e-005 2.7e-008 -17.44 0.0 97 491 1070 4533 0.19756 1.1e-010 245 3 M5652_1.02 NEUROD2 RMCATATGBY 7.4e-004 9.7e-007 -13.85 0.0 39 491 434 4139 0.07943 4.0e-009 245 3 M5856_1.02 SP8 RGKGGGCGTGGY 7.7e-003 1.0e-005 -11.51 0.0 199 489 2400 5417 0.40695 4.1e-008 244 3 M5932_1.02 TFEC VTCAYGTGAY 3.1e-008 4.1e-011 -23.91 0.0 43 491 576 4856 0.08758 1.7e-013 245 3 M5955_1.02 YY2 WAATGGCGGHY 2.7e-002 3.5e-005 -10.25 0.0 126 490 1433 4951 0.25714 1.5e-007 244 3 M5965_1.02 ZIC4 DCDCMGCGGGGGGYC 4.9e-042 6.4e-045 -101.75 0.0 46 486 811 5108 0.09465 2.7e-047 242 3 M6139_1.02 AHR KCACGCRAH 6.6e-005 8.7e-008 -16.25 0.0 288 492 3119 4964 0.58537 3.6e-010 245 3 M6144_1.02 TFAP2B BCCCBCRGGC 2.3e-017 3.0e-020 -44.95 0.0 119 491 1643 5475 0.24236 1.2e-022 245 3 M6146_1.02 TFAP2D ACGSGCCBCRGGCS 7.1e-009 9.3e-012 -25.40 0.0 131 487 1380 4305 0.26899 3.8e-014 243 3 M6150_1.02 ARNT2 GYSYSCCACGNC 5.4e0000 7.0e-003 -4.96 0.0 149 489 1810 5485 0.30470 2.9e-005 244 3 M6151_1.02 ARNT BYRCGTGC 7.9e-005 1.0e-007 -16.08 0.0 103 493 1116 4518 0.20892 4.2e-010 246 3 M6155_1.02 ATF6 GBGSTGACGTGG 1.9e-001 2.5e-004 -8.30 0.0 155 489 1395 3956 0.31697 1.0e-006 244 3 M6161_1.02 BHLHE41 WSVRKSYCACGTGMHGRRRV 1.5e-004 2.0e-007 -15.45 0.0 85 481 1020 4840 0.17672 8.2e-010 240 3 M6191_1.02 E2F2 GGCGCGAAAC 9.7e-056 1.3e-058 -133.30 0.0 85 491 1221 4488 0.17312 5.2e-061 245 3 M6192_1.02 E2F3 SSCGCSAAAC 1.4e-050 1.8e-053 -121.44 0.0 115 491 1503 4441 0.23422 7.4e-056 245 3 M6194_1.02 E2F5 SGCGCSAAAH 3.4e-061 4.5e-064 -145.86 0.0 73 491 1044 4161 0.14868 1.8e-066 245 3 M6196_1.02 E2F7 WWDGGCGCGAAAM 3.2e-020 4.2e-023 -51.52 0.0 80 488 700 2932 0.16393 1.7e-025 243 3 M6199_1.02 EGR2 DGVGTGGGCGG 6.1e-001 7.9e-004 -7.14 0.0 280 490 3153 5235 0.57143 3.3e-006 244 3 M6201_1.02 EGR4 GGSGGYRGGGM 3.9e-009 5.1e-012 -26.00 0.0 30 490 446 5042 0.06122 2.1e-014 244 3 M6204_1.02 ELF2 TDNCAGGAAGTRRVT 6.4e-001 8.4e-004 -7.08 0.0 266 486 3088 5342 0.54733 3.5e-006 242 3 M6207_1.02 ELK1 RCCGGAAGT 4.3e-001 5.7e-004 -7.48 0.0 266 492 3189 5582 0.54065 2.3e-006 245 3 M6208_1.02 ELK3 VMCHGGAARTSC 2.8e-004 3.6e-007 -14.83 0.0 199 489 2321 5183 0.40695 1.5e-009 244 3 M6210_1.02 ENO1 YDSMCACRTGSYB 1.5e-002 1.9e-005 -10.85 0.0 132 488 1600 5280 0.27049 8.0e-008 243 3 M6213_1.02 ERG ACCGGAARTSM 1.9e-003 2.5e-006 -12.92 0.0 228 490 2526 5001 0.46531 1.0e-008 244 3 M6221_1.02 ETS2 VMVGGAAGTKS 5.6e-002 7.4e-005 -9.51 0.0 360 490 4287 5612 0.73469 3.0e-007 244 3 M6267_1.02 GLIS3 GYGGGGGGTM 3.3e-002 4.4e-005 -10.03 0.0 27 491 385 5377 0.05499 1.8e-007 245 3 M6270_1.02 NHLH1 RRGGMCGCAGCTGMKMCCCV 1.1e-011 1.4e-014 -31.91 0.0 103 481 1102 4097 0.21414 5.8e-017 240 3 M6271_1.02 HES1 KGKCKCGTGBCKB 1.7e-013 2.2e-016 -36.07 0.0 64 488 950 5495 0.13115 8.9e-019 243 3 M6273_1.02 HEY2 GBBGGCWCGTGGCHTBV 3.7e-020 4.8e-023 -51.39 0.0 134 484 1593 4592 0.27686 2.0e-025 241 3 M6274_1.02 HIC1 GGGKTGCCC 1.2e-004 1.5e-007 -15.69 0.0 34 492 478 5220 0.06911 6.3e-010 245 3 M6275_1.02 HIF1A SBSTACGTGCSB 4.2e-011 5.6e-014 -30.52 0.0 123 489 1366 4472 0.25153 2.3e-016 244 3 M6306_1.02 INSM1 TGTMAGGGGGCR 1.5e-003 2.0e-006 -13.14 0.0 11 489 159 4358 0.02249 8.1e-009 244 3 M6321_1.02 KLF15 RSMKGGGAGDKGGGGSS 5.0e0000 6.5e-003 -5.04 0.0 228 484 2652 5317 0.47107 2.7e-005 241 3 M6324_1.02 KLF4 DGGGYGKGGC 5.1e-003 6.7e-006 -11.92 0.0 229 491 2763 5491 0.46640 2.7e-008 245 3 M6325_1.02 KLF6 GGGGGCKG 1.5e-003 1.9e-006 -13.15 0.0 129 493 1639 5544 0.26166 7.9e-009 246 3 M6326_1.02 KLF8 CMGGGKGTG 1.0e-011 1.3e-014 -31.95 0.0 76 492 1040 5273 0.15447 5.4e-017 245 3 M6337_1.02 MBD2 SSGKCCGGMGR 2.9e-013 3.8e-016 -35.50 0.0 202 490 2186 4593 0.41224 1.6e-018 244 3 M6339_1.02 MECP2 YYCCGGS 4.1e-013 5.4e-016 -35.15 0.0 148 494 1442 3963 0.29960 2.2e-018 246 3 M6346_1.02 MLXIPL VCACGVSGKKGBCMCRTGC 4.7e-014 6.2e-017 -37.32 0.0 54 482 584 3615 0.11203 2.6e-019 240 3 M6352_1.02 MYCN CCACGTGS 7.6e-029 1.0e-031 -71.38 0.0 109 493 1456 4931 0.22110 4.1e-034 246 3 M6353_1.02 MYF6 GCAGSTG 3.8e-008 5.0e-011 -23.71 0.0 100 494 1340 5524 0.20243 2.0e-013 246 3 M6354_1.02 MYOD1 RACAGSTGS 2.6e-001 3.4e-004 -7.98 0.0 86 492 1098 5510 0.17480 1.4e-006 245 3 M6355_1.02 MYOG YRACAGCTGCWGC 2.0e-009 2.6e-012 -26.66 0.0 84 488 1098 5139 0.17213 1.1e-014 243 3 M6358_1.02 NEUROD1 SGGCAGRTGKSC 3.2e-030 4.2e-033 -74.56 0.0 41 489 729 5436 0.08384 1.7e-035 244 3 M6422_1.02 PLAGL1 CRGGGGGCCC 5.6e-022 7.3e-025 -55.58 0.0 29 491 510 5254 0.05906 3.0e-027 245 3 M6468_1.02 SNAI1 SCAGGTGK 3.2e-009 4.2e-012 -26.19 0.0 41 493 622 5511 0.08316 1.7e-014 246 3 M6482_1.02 SP3 VGVVGGGGGCGGGGCBRGSS 2.8e-004 3.6e-007 -14.83 0.0 229 481 2770 5362 0.47609 1.5e-009 240 3 M6483_1.02 SP4 GSGGSCRGGGGSGGGGSGGSSSSG 1.1e0000 1.4e-003 -6.58 0.0 221 477 2130 4287 0.46331 5.8e-006 238 3 M6486_1.02 SPZ1 CGGCKGWWACMBYGGG 1.9e0000 2.4e-003 -6.02 0.0 239 485 2640 5049 0.49278 1.0e-005 242 3 M6500_1.02 TAL1 GACCATCTGTTS 2.3e0000 3.1e-003 -5.79 0.0 41 489 394 3807 0.08384 1.3e-005 244 3 M6513_1.02 TFAP4 RYCAGCTGYGG 2.9e-013 3.8e-016 -35.50 0.0 138 490 1707 5054 0.28163 1.6e-018 244 3 M6514_1.02 TFCP2 SCCWGMNCDSRCCRGA 5.3e-002 7.0e-005 -9.57 0.0 361 485 4252 5498 0.74433 2.9e-007 242 3 M6515_1.02 TFDP1 AWWKRGCGGGAAAY 3.9e-035 5.2e-038 -85.85 0.0 61 487 860 4379 0.12526 2.1e-040 243 3 M6516_1.02 TCF3 GRVCATCTGKT 6.0e-007 7.9e-010 -20.96 0.0 44 490 634 5381 0.08980 3.2e-012 244 3 M6527_1.02 TWIST1 MCCCAGGTGK 3.1e-038 4.1e-041 -92.99 0.0 39 491 666 4816 0.07943 1.7e-043 245 3 M6535_1.02 WT1 GMGGGGGCGKGGG 1.1e-005 1.4e-008 -18.08 0.0 106 488 1348 5297 0.21721 5.8e-011 243 3 M6547_1.02 ZFX SVGSSSSSCAGGCCBVGSC 4.4e-009 5.8e-012 -25.88 0.0 170 482 2101 5210 0.35270 2.4e-014 240 3 M6558_1.02 ZNF423 GCACCCTWGGGTGYC 2.5e-003 3.3e-006 -12.62 0.0 74 486 161 689 0.15226 1.4e-008 242 ## # Detailed descriptions of columns in this file: # # db: The name of the database (file name) that contains the motif. # id: A name for the motif that is unique in the motif database file. # alt: An alternate name of the motif that may be provided # in the motif database file. # consensus: A consensus sequence computed from the motif. # E-value: The expected number motifs that would have least one. # region as enriched for best matches to the motif as the reported region. # The E-value is the p-value multiplied by the number of motifs in the # input database(s). # adj_p-value: The probability that any tested region would be as enriched for # best matches to this motif as the reported region is. # By default the p-value is calculated by using the one-tailed binomial # test on the number of sequences with a match to the motif # that have their best match in the reported region, corrected for # the number of regions and score thresholds tested. # The test assumes that the probability that the best match in a sequence # falls in the region is the region width divided by the # number of places a motif # can align in the sequence (sequence length minus motif width plus 1). # When CentriMo is run in discriminative mode with a negative # set of sequences, the p-value of a region is calculated # using the Fisher exact test on the # enrichment of best matches in the positive sequences relative # to the negative sequences, corrected # for the number of regions and score thresholds tested. # The test assumes that the probability that the best match (if any) # falls into a given region # is the same for all positive and negative sequences. # log_adj_p-value: Log of adjusted p-value. # bin_location: Location of the center of the most enriched region. # bin_width: The width (in sequence positions) of the most enriched region. # A best match to the motif is counted as being in the region if the # center of the motif falls in the region. # total_width: The window maximal size which can be reached for this motif: # rounded(sequence length - motif length +1)/2 # sites_in_bin: The number of (positive) sequences whose best match to the motif # falls in the reported region. # Note: This number may be less than the number of # (positive) sequences that have a best match in the region. # The reason for this is that a sequence may have many matches that score # equally best. # If n matches have the best score in a sequence, 1/n is added to the # appropriate bin for each match. # total_sites: The number of sequences containing a match to the motif # above the score threshold. # p_success: The probability of falling in the enriched window: # bin width / total width # p-value: The uncorrected p-value before it gets adjusted to the # number of multiple tests to give the adjusted p-value. # mult_tests: This is the number of multiple tests (n) done for this motif. # It was used to correct the original p-value of a region for # multiple tests using the formula: # p' = 1 - (1-p)^n where p is the uncorrected p-value. # The number of multiple tests is the number of regions # considered times the number of score thresholds considered. # It depends on the motif length, sequence length, and the type of # optimizations being done (central enrichment, local enrichment, # score optimization).