# DREME 4.12.0 # command: dreme -v 1 -oc /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeK562eGFPComparisons/TAF7.IDR0.05.filt.narrowPeak.summitPlusMinus250bp.MemeChipResultsDefaultMax/dreme_out -png -dna -p /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeK562eGFPComparisons/TAF7.IDR0.05.filt.narrowPeak.summitPlusMinus250bp.MemeChipResultsDefaultMax/seqs-centered -n /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeK562eGFPComparisons/TAF7.IDR0.05.filt.narrowPeak.summitPlusMinus250bp.MemeChipResultsDefaultMax/seqs-shuffled # positives: 12309 from /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeK562eGFPComparisons/TAF7.IDR0.05.filt.narrowPeak.summitPlusMinus250bp.MemeChipResultsDefaultMax/seqs-centered (Wed Nov 22 12:43:44 PST 2017) # negatives: 12309 from /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeK562eGFPComparisons/TAF7.IDR0.05.filt.narrowPeak.summitPlusMinus250bp.MemeChipResultsDefaultMax/seqs-shuffled (Wed Nov 22 12:43:45 PST 2017) # host: indra # when: Wed Nov 22 13:00:03 PST 2017 MEME version 4.12.0 ALPHABET "DNA" DNA-LIKE A "Adenine" CC0000 ~ T "Thymine" 008000 C "Cytosine" 0000CC ~ G "Guanine" FFB300 N "Any base" = ACGT X = ACGT . = ACGT V "Not T" = ACG H "Not G" = ACT D "Not C" = AGT B "Not A" = CGT M "Amino" = AC R "Purine" = AG W "Weak" = AT S "Strong" = CG Y "Pyrimidine" = CT K "Keto" = GT U = T END ALPHABET strands: + - Background letter frequencies (from dataset): A 0.219 C 0.281 G 0.282 T 0.218 MOTIF CAANATGG DREME-1 # Word RC Word Pos Neg P-value E-value # BEST CAANATGG CCATNTTG 888 120 3.9e-151 1.7e-146 # CAAGATGG CCATCTTG 469 52 7.5e-087 3.4e-082 # CAAAATGG CCATTTTG 201 29 2.0e-033 9.2e-029 # CAACATGG CCATGTTG 187 30 2.0e-029 8.7e-025 # CAATATGG CCATATTG 39 9 7.5e-006 3.3e-001 letter-probability matrix: alength= 4 w= 8 nsites= 907 E= 1.7e-146 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.224917 0.209482 0.521499 0.044101 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 MOTIF CVGCCKCC DREME-2 # Word RC Word Pos Neg P-value E-value # BEST CVGCCKCC GGMGGCBG 1381 570 5.6e-084 2.5e-079 # CCGCCGCC GGCGGCGG 358 94 2.9e-038 1.3e-033 # CAGCCTCC GGAGGCTG 384 143 2.7e-027 1.2e-022 # CGGCCTCC GGAGGCCG 231 88 2.0e-016 8.8e-012 # CCGCCTCC GGAGGCGG 272 115 2.6e-016 1.2e-011 # CGGCCGCC GGCGGCCG 180 79 1.3e-010 5.6e-006 # CAGCCGCC GGCGGCTG 130 93 7.6e-003 3.4e+002 letter-probability matrix: alength= 4 w= 8 nsites= 1527 E= 2.5e-079 0.000000 1.000000 0.000000 0.000000 0.329404 0.410609 0.259987 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.428291 0.571709 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 MOTIF TARTCCCA DREME-3 # Word RC Word Pos Neg P-value E-value # BEST TARTCCCA TGGGAYTA 386 34 4.2e-078 1.9e-073 # TAATCCCA TGGGATTA 292 16 9.0e-068 4.0e-063 # TAGTCCCA TGGGACTA 94 18 6.0e-014 2.7e-009 letter-probability matrix: alength= 4 w= 8 nsites= 388 E= 1.9e-073 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 0.755155 0.000000 0.244845 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 MOTIF AAAATDAG DREME-4 # Word RC Word Pos Neg P-value E-value # BEST AAAATDAG CTHATTTT 515 109 8.5e-066 3.8e-061 # AAAATTAG CTAATTTT 230 28 2.6e-041 1.1e-036 # AAAATGAG CTCATTTT 162 44 1.7e-017 7.6e-013 # AAAATAAG CTTATTTT 125 37 9.8e-013 4.3e-008 letter-probability matrix: alength= 4 w= 8 nsites= 518 E= 3.8e-061 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.241313 0.000000 0.314672 0.444015 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 MOTIF HTTCCY DREME-5 # Word RC Word Pos Neg P-value E-value # BEST HTTCCY RGGAAD 5541 4378 6.7e-052 3.0e-047 # TTTCCT AGGAAA 1348 876 4.0e-026 1.8e-021 # CTTCCT AGGAAG 1634 1159 6.7e-022 3.0e-017 # CTTCCC GGGAAG 1745 1289 4.9e-019 2.2e-014 # TTTCCC GGGAAA 1245 1004 5.4e-008 2.4e-003 # ATTCCT AGGAAT 609 504 7.1e-004 3.1e+001 # ATTCCC GGGAAT 600 514 4.6e-003 2.0e+002 letter-probability matrix: alength= 4 w= 6 nsites= 7679 E= 3.0e-047 0.160698 0.479490 0.000000 0.359812 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.495247 0.000000 0.504753 MOTIF TAAAAATA DREME-6 # Word RC Word Pos Neg P-value E-value # BEST TAAAAATA TATTTTTA 214 13 1.0e-048 4.6e-044 # TAAAAATA TATTTTTA 214 13 1.0e-048 4.6e-044 letter-probability matrix: alength= 4 w= 8 nsites= 214 E= 4.6e-044 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 MOTIF GCCRCCAY DREME-7 # Word RC Word Pos Neg P-value E-value # BEST GCCRCCAY RTGGYGGC 462 136 1.0e-043 4.4e-039 # GCCACCAC GTGGTGGC 193 59 2.9e-018 1.3e-013 # GCCGCCAT ATGGCGGC 102 22 7.3e-014 3.2e-009 # GCCACCAT ATGGTGGC 102 28 2.0e-011 8.7e-007 # GCCGCCAC GTGGCGGC 71 30 2.7e-005 1.2e+000 letter-probability matrix: alength= 4 w= 8 nsites= 468 E= 4.4e-039 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.632479 0.000000 0.367521 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.557692 0.000000 0.442308 MOTIF GGTTCAMR DREME-8 # Word RC Word Pos Neg P-value E-value # BEST GGTTCAMR YKTGAACC 407 106 1.1e-043 4.7e-039 # GGTTCAAA TTTGAACC 157 27 6.1e-024 2.7e-019 # GGTTCAAG CTTGAACC 144 36 6.6e-017 2.9e-012 # GGTTCACG CGTGAACC 40 13 1.3e-004 5.8e+000 # GGTTCACA TGTGAACC 66 30 1.5e-004 6.5e+000 letter-probability matrix: alength= 4 w= 8 nsites= 408 E= 4.7e-039 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.740196 0.259804 0.000000 0.000000 0.546569 0.000000 0.453431 0.000000 MOTIF CTSCWGCC DREME-9 # Word RC Word Pos Neg P-value E-value # BEST CTSCWGCC GGCWGSAG 956 465 5.9e-042 2.6e-037 # CTCCAGCC GGCTGGAG 308 128 8.5e-019 3.7e-014 # CTCCTGCC GGCAGGAG 306 128 1.7e-018 7.6e-014 # CTGCAGCC GGCTGCAG 227 98 2.2e-013 9.7e-009 # CTGCTGCC GGCAGCAG 157 117 8.8e-003 3.9e+002 letter-probability matrix: alength= 4 w= 8 nsites= 1006 E= 2.6e-037 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.613320 0.386680 0.000000 0.000000 1.000000 0.000000 0.000000 0.534791 0.000000 0.000000 0.465209 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 MOTIF GTAGAGAY DREME-10 # Word RC Word Pos Neg P-value E-value # BEST GTAGAGAY RTCTCTAC 227 34 7.8e-037 3.4e-032 # GTAGAGAC GTCTCTAC 171 15 3.2e-035 1.4e-030 # GTAGAGAT ATCTCTAC 56 19 1.1e-005 4.8e-001 letter-probability matrix: alength= 4 w= 8 nsites= 227 E= 3.4e-032 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.753304 0.000000 0.246696 MOTIF GTGAKCCR DREME-11 # Word RC Word Pos Neg P-value E-value # BEST GTGAKCCR YGGMTCAC 394 128 1.9e-033 8.3e-029 # GTGATCCG CGGATCAC 87 11 3.6e-016 1.6e-011 # GTGAGCCA TGGCTCAC 172 60 4.0e-014 1.7e-009 # GTGATCCA TGGATCAC 70 19 2.4e-008 1.0e-003 # GTGAGCCG CGGCTCAC 99 39 1.6e-007 6.9e-003 letter-probability matrix: alength= 4 w= 8 nsites= 429 E= 8.3e-029 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.634033 0.365967 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.566434 0.000000 0.433566 0.000000 MOTIF TGTCAGAR DREME-12 # Word RC Word Pos Neg P-value E-value # BEST TGTCAGAR YTCTGACA 263 79 7.6e-025 3.3e-020 # TGTCAGAG CTCTGACA 208 50 1.3e-024 5.8e-020 # TGTCAGAA TTCTGACA 56 29 2.2e-003 9.7e+001 letter-probability matrix: alength= 4 w= 8 nsites= 264 E= 3.3e-020 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.212121 0.000000 0.787879 0.000000 MOTIF AGGTCAGD DREME-13 # Word RC Word Pos Neg P-value E-value # BEST AGGTCAGD HCTGACCT 360 144 4.2e-023 1.9e-018 # AGGTCAGG CCTGACCT 187 68 1.9e-014 8.3e-010 # AGGTCAGT ACTGACCT 93 32 2.0e-008 8.9e-004 # AGGTCAGA TCTGACCT 80 44 7.6e-004 3.3e+001 letter-probability matrix: alength= 4 w= 8 nsites= 365 E= 1.9e-018 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.221918 0.000000 0.520548 0.257534 MOTIF CMCAGC DREME-14 # Word RC Word Pos Neg P-value E-value # BEST CMCAGC GCTGKG 2761 2153 1.7e-022 7.4e-018 # CCCAGC GCTGGG 1825 1371 3.9e-018 1.7e-013 # CACAGC GCTGTG 1114 912 1.5e-006 6.8e-002 letter-probability matrix: alength= 4 w= 6 nsites= 3138 E= 7.4e-018 0.000000 1.000000 0.000000 0.000000 0.373805 0.626195 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 MOTIF AGTYRCTC DREME-15 # Word RC Word Pos Neg P-value E-value # BEST AGTYRCTC GAGYRACT 373 132 1.8e-028 7.8e-024 # AGTTGCTC GAGCAACT 143 41 7.9e-015 3.5e-010 # AGTCACTC GAGTGACT 120 47 6.7e-009 2.9e-004 # AGTCGCTC GAGCGACT 68 26 8.4e-006 3.7e-001 # AGTTACTC GAGTAACT 43 18 9.2e-004 4.0e+001 letter-probability matrix: alength= 4 w= 8 nsites= 375 E= 7.8e-024 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.504000 0.000000 0.496000 0.437333 0.000000 0.562667 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 MOTIF AAAYAMA DREME-16 # Word RC Word Pos Neg P-value E-value # BEST AAAYAMA TKTRTTT 862 514 1.9e-022 8.3e-018 # AAATACA TGTATTT 164 61 1.8e-012 7.7e-008 # AAATAAA TTTATTT 207 109 1.6e-008 6.8e-004 # AAACAAA TTTGTTT 335 227 2.3e-006 1.0e-001 # AAACACA TGTGTTT 214 140 4.4e-005 1.9e+000 letter-probability matrix: alength= 4 w= 7 nsites= 996 E= 8.3e-018 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.623494 0.000000 0.376506 1.000000 0.000000 0.000000 0.000000 0.614458 0.385542 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 MOTIF ACCAKCCT DREME-17 # Word RC Word Pos Neg P-value E-value # BEST ACCAKCCT AGGMTGGT 257 84 4.2e-022 1.8e-017 # ACCAGCCT AGGCTGGT 158 42 1.9e-017 8.4e-013 # ACCATCCT AGGATGGT 99 42 8.2e-007 3.6e-002 letter-probability matrix: alength= 4 w= 8 nsites= 260 E= 1.8e-017 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.615385 0.384615 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 MOTIF CRGYGGC DREME-18 # Word RC Word Pos Neg P-value E-value # BEST CRGYGGC GCCRCYG 1064 690 9.0e-021 3.9e-016 # CAGCGGC GCCGCTG 322 197 1.6e-008 7.1e-004 # CGGCGGC GCCGCCG 257 150 5.0e-008 2.2e-003 # CAGTGGC GCCACTG 332 225 2.6e-006 1.1e-001 # CGGTGGC GCCACCG 230 146 7.5e-006 3.2e-001 letter-probability matrix: alength= 4 w= 7 nsites= 1139 E= 3.9e-016 0.000000 1.000000 0.000000 0.000000 0.569798 0.000000 0.430202 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.502195 0.000000 0.497805 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 MOTIF GGGTTTCA DREME-19 # Word RC Word Pos Neg P-value E-value # BEST GGGTTTCA TGAAACCC 169 43 2.7e-019 1.2e-014 # GGGTTTCA TGAAACCC 169 43 2.7e-019 1.2e-014 letter-probability matrix: alength= 4 w= 8 nsites= 169 E= 1.2e-014 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 MOTIF AGGTTGCA DREME-20 # Word RC Word Pos Neg P-value E-value # BEST AGGTTGCA TGCAACCT 133 26 6.6e-019 2.9e-014 # AGGTTGCA TGCAACCT 133 26 6.6e-019 2.9e-014 letter-probability matrix: alength= 4 w= 8 nsites= 135 E= 2.9e-014 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 MOTIF CAAAGTGC DREME-21 # Word RC Word Pos Neg P-value E-value # BEST CAAAGTGC GCACTTTG 147 33 8.6e-019 3.7e-014 # CAAAGTGC GCACTTTG 147 33 8.6e-019 3.7e-014 letter-probability matrix: alength= 4 w= 8 nsites= 147 E= 3.7e-014 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 MOTIF ATGGCG DREME-22 # Word RC Word Pos Neg P-value E-value # BEST ATGGCG CGCCAT 501 264 1.2e-018 5.2e-014 # ATGGCG CGCCAT 501 264 1.2e-018 5.2e-014 letter-probability matrix: alength= 4 w= 6 nsites= 510 E= 5.2e-014 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 MOTIF CCSAGTAG DREME-23 # Word RC Word Pos Neg P-value E-value # BEST CCSAGTAG CTACTSGG 155 39 5.5e-018 2.4e-013 # CCCAGTAG CTACTGGG 117 29 4.2e-014 1.8e-009 # CCGAGTAG CTACTCGG 38 10 3.0e-005 1.3e+000 letter-probability matrix: alength= 4 w= 8 nsites= 155 E= 2.4e-013 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.754839 0.245161 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 MOTIF GCDTTTCC DREME-24 # Word RC Word Pos Neg P-value E-value # BEST GCDTTTCC GGAAAHGC 138 31 1.0e-017 4.4e-013 # GCTTTTCC GGAAAAGC 62 13 4.0e-009 1.7e-004 # GCATTTCC GGAAATGC 57 12 1.8e-008 7.8e-004 # GCGTTTCC GGAAACGC 19 6 7.3e-003 3.2e+002 letter-probability matrix: alength= 4 w= 8 nsites= 138 E= 4.4e-013 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.413043 0.000000 0.137681 0.449275 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 MOTIF GWGACRGA DREME-25 # Word RC Word Pos Neg P-value E-value # BEST GWGACRGA TCYGTCWC 351 165 4.4e-017 1.9e-012 # GTGACAGA TCTGTCAC 97 35 2.9e-008 1.3e-003 # GAGACGGA TCCGTCTC 81 29 3.5e-007 1.5e-002 # GAGACAGA TCTGTCTC 142 89 2.8e-004 1.2e+001 # GTGACGGA TCCGTCAC 43 16 2.9e-004 1.2e+001 letter-probability matrix: alength= 4 w= 8 nsites= 387 E= 1.9e-012 0.000000 0.000000 1.000000 0.000000 0.635659 0.000000 0.000000 0.364341 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.679587 0.000000 0.320413 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 MOTIF CACDCAC DREME-26 # Word RC Word Pos Neg P-value E-value # BEST CACDCAC GTGHGTG 783 508 1.9e-015 8.2e-011 # CACACAC GTGTGTG 389 235 2.3e-010 9.8e-006 # CACTCAC GTGAGTG 305 205 4.4e-006 1.9e-001 # CACGCAC GTGCGTG 166 115 1.3e-003 5.7e+001 letter-probability matrix: alength= 4 w= 7 nsites= 1146 E= 8.2e-011 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.583770 0.000000 0.139616 0.276614 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 MOTIF CCWCCWCC DREME-27 # Word RC Word Pos Neg P-value E-value # BEST CCWCCWCC GGWGGWGG 635 381 1.9e-016 8.1e-012 # CCTCCTCC GGAGGAGG 292 146 8.6e-013 3.7e-008 # CCACCTCC GGAGGTGG 186 111 7.1e-006 3.1e-001 # CCTCCACC GGTGGAGG 131 85 1.0e-003 4.4e+001 # CCACCACC GGTGGTGG 97 62 3.3e-003 1.4e+002 letter-probability matrix: alength= 4 w= 8 nsites= 679 E= 8.1e-012 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.415317 0.000000 0.000000 0.584683 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.316642 0.000000 0.000000 0.683358 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 MOTIF GCTGAGDC DREME-28 # Word RC Word Pos Neg P-value E-value # BEST GCTGAGDC GHCTCAGC 362 187 1.8e-014 7.9e-010 # GCTGAGAC GTCTCAGC 148 55 2.1e-011 8.9e-007 # GCTGAGGC GCCTCAGC 139 89 5.3e-004 2.3e+001 # GCTGAGTC GACTCAGC 75 45 3.8e-003 1.7e+002 letter-probability matrix: alength= 4 w= 8 nsites= 363 E= 7.9e-010 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.410468 0.000000 0.382920 0.206612 0.000000 1.000000 0.000000 0.000000 MOTIF AGWTCGAG DREME-29 # Word RC Word Pos Neg P-value E-value # BEST AGWTCGAG CTCGAWCT 123 33 8.9e-014 3.9e-009 # AGATCGAG CTCGATCT 64 17 6.8e-008 3.0e-003 # AGTTCGAG CTCGAACT 59 16 2.9e-007 1.3e-002 letter-probability matrix: alength= 4 w= 8 nsites= 123 E= 3.9e-009 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.520325 0.000000 0.000000 0.479675 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 MOTIF CAGSCATG DREME-30 # Word RC Word Pos Neg P-value E-value # BEST CAGSCATG CATGSCTG 229 100 3.1e-013 1.3e-008 # CAGGCATG CATGCCTG 151 55 6.4e-012 2.8e-007 # CAGCCATG CATGGCTG 80 45 1.1e-003 4.7e+001 letter-probability matrix: alength= 4 w= 8 nsites= 236 E= 1.3e-008 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.343220 0.656780 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 MOTIF AGGCATTS DREME-31 # Word RC Word Pos Neg P-value E-value # BEST AGGCATTS SAATGCCT 162 58 5.8e-013 2.5e-008 # AGGCATTC GAATGCCT 73 23 1.5e-007 6.4e-003 # AGGCATTG CAATGCCT 89 35 6.3e-007 2.7e-002 letter-probability matrix: alength= 4 w= 8 nsites= 162 E= 2.5e-008 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.450617 0.549383 0.000000 MOTIF AVAGAAA DREME-32 # Word RC Word Pos Neg P-value E-value # BEST AVAGAAA TTTCTBT 981 701 8.2e-013 3.5e-008 # AGAGAAA TTTCTCT 405 268 4.8e-008 2.1e-003 # AAAGAAA TTTCTTT 415 287 5.4e-007 2.3e-002 # ACAGAAA TTTCTGT 239 187 6.3e-003 2.7e+002 letter-probability matrix: alength= 4 w= 7 nsites= 1118 E= 3.5e-008 1.000000 0.000000 0.000000 0.000000 0.415027 0.213775 0.371199 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 MOTIF ARATTATA DREME-33 # Word RC Word Pos Neg P-value E-value # BEST ARATTATA TATAATYT 89 21 1.7e-011 7.4e-007 # AGATTATA TATAATCT 61 9 6.1e-011 2.6e-006 # AAATTATA TATAATTT 28 12 8.3e-003 3.6e+002 letter-probability matrix: alength= 4 w= 8 nsites= 90 E= 7.4e-007 1.000000 0.000000 0.000000 0.000000 0.322222 0.000000 0.677778 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 MOTIF CCRTGTTA DREME-34 # Word RC Word Pos Neg P-value E-value # BEST CCRTGTTA TAACAYGG 77 16 4.5e-011 1.9e-006 # CCGTGTTA TAACACGG 47 4 1.2e-010 5.0e-006 # CCATGTTA TAACATGG 31 12 2.7e-003 1.2e+002 letter-probability matrix: alength= 4 w= 8 nsites= 79 E= 1.9e-006 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.392405 0.000000 0.607595 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 MOTIF CCTRGAAA DREME-35 # Word RC Word Pos Neg P-value E-value # BEST CCTRGAAA TTTCYAGG 162 70 6.0e-010 2.6e-005 # CCTGGAAA TTTCCAGG 119 49 3.0e-008 1.3e-003 # CCTAGAAA TTTCTAGG 44 21 2.9e-003 1.3e+002 letter-probability matrix: alength= 4 w= 8 nsites= 163 E= 2.6e-005 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.269939 0.000000 0.730061 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 MOTIF GAGATKAA DREME-36 # Word RC Word Pos Neg P-value E-value # BEST GAGATKAA TTMATCTC 111 38 7.8e-010 3.4e-005 # GAGATGAA TTCATCTC 91 31 2.3e-008 1.0e-003 # GAGATTAA TTAATCTC 20 7 9.5e-003 4.1e+002 letter-probability matrix: alength= 4 w= 8 nsites= 111 E= 3.4e-005 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.819820 0.180180 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 MOTIF TTAWAAAA DREME-37 # Word RC Word Pos Neg P-value E-value # BEST TTAWAAAA TTTTWTAA 140 56 7.5e-010 3.2e-005 # TTAAAAAA TTTTTTAA 105 44 2.9e-007 1.3e-002 # TTATAAAA TTTTATAA 35 12 5.4e-004 2.3e+001 letter-probability matrix: alength= 4 w= 8 nsites= 141 E= 3.2e-005 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 0.751773 0.000000 0.000000 0.248227 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 MOTIF AGACAGTG DREME-38 # Word RC Word Pos Neg P-value E-value # BEST AGACAGTG CACTGTCT 102 34 2.0e-009 8.6e-005 # AGACAGTG CACTGTCT 102 34 2.0e-009 8.6e-005 letter-probability matrix: alength= 4 w= 8 nsites= 102 E= 8.6e-005 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 MOTIF CNGCAGC DREME-39 # Word RC Word Pos Neg P-value E-value # BEST CNGCAGC GCTGCNG 1059 814 2.1e-009 9.2e-005 # CTGCAGC GCTGCAG 236 150 6.0e-006 2.6e-001 # CAGCAGC GCTGCTG 340 253 1.7e-004 7.4e+000 # CCGCAGC GCTGCGG 326 250 7.7e-004 3.3e+001 # CGGCAGC GCTGCCG 263 206 4.5e-003 1.9e+002 letter-probability matrix: alength= 4 w= 7 nsites= 1160 E= 9.2e-005 0.000000 1.000000 0.000000 0.000000 0.293103 0.282759 0.226724 0.197414 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 MOTIF CCATYTTA DREME-40 # Word RC Word Pos Neg P-value E-value # BEST CCATYTTA TAARATGG 106 37 3.0e-009 1.3e-004 # CCATCTTA TAAGATGG 63 14 6.7e-009 2.9e-004 # CCATTTTA TAAAATGG 46 23 3.8e-003 1.6e+002 letter-probability matrix: alength= 4 w= 8 nsites= 112 E= 1.3e-004 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.589286 0.000000 0.410714 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 MOTIF AGGCHGAG DREME-41 # Word RC Word Pos Neg P-value E-value # BEST AGGCHGAG CTCDGCCT 342 208 4.1e-009 1.8e-004 # AGGCTGAG CTCAGCCT 96 52 1.8e-004 7.7e+000 # AGGCAGAG CTCTGCCT 161 105 3.3e-004 1.4e+001 # AGGCCGAG CTCGGCCT 88 53 2.0e-003 8.5e+001 letter-probability matrix: alength= 4 w= 8 nsites= 348 E= 1.8e-004 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.468391 0.252874 0.000000 0.278736 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 MOTIF CTGTCSCC DREME-42 # Word RC Word Pos Neg P-value E-value # BEST CTGTCSCC GGSGACAG 206 107 9.5e-009 4.1e-004 # CTGTCGCC GGCGACAG 86 32 3.3e-007 1.4e-002 # CTGTCCCC GGGGACAG 121 75 6.0e-004 2.6e+001 letter-probability matrix: alength= 4 w= 8 nsites= 210 E= 4.1e-004 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.590476 0.409524 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 MOTIF AYTGTTAC DREME-43 # Word RC Word Pos Neg P-value E-value # BEST AYTGTTAC GTAACART 67 17 1.7e-008 7.2e-004 # ACTGTTAC GTAACAGT 40 10 1.2e-005 5.1e-001 # ATTGTTAC GTAACAAT 27 7 4.1e-004 1.8e+001 letter-probability matrix: alength= 4 w= 8 nsites= 67 E= 7.2e-004 1.000000 0.000000 0.000000 0.000000 0.000000 0.597015 0.000000 0.402985 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 MOTIF AGGTACYG DREME-44 # Word RC Word Pos Neg P-value E-value # BEST AGGTACYG CRGTACCT 88 29 2.0e-008 8.6e-004 # AGGTACCG CGGTACCT 46 12 4.0e-006 1.7e-001 # AGGTACTG CAGTACCT 42 17 7.6e-004 3.3e+001 letter-probability matrix: alength= 4 w= 8 nsites= 88 E= 8.6e-004 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.522727 0.000000 0.477273 0.000000 0.000000 1.000000 0.000000 MOTIF CACCGTSC DREME-45 # Word RC Word Pos Neg P-value E-value # BEST CACCGTSC GSACGGTG 86 28 2.3e-008 9.7e-004 # CACCGTCC GGACGGTG 48 10 2.2e-007 9.5e-003 # CACCGTGC GCACGGTG 38 18 5.2e-003 2.2e+002 letter-probability matrix: alength= 4 w= 8 nsites= 86 E= 9.7e-004 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.558140 0.441860 0.000000 0.000000 1.000000 0.000000 0.000000 MOTIF ACYTCCGG DREME-46 # Word RC Word Pos Neg P-value E-value # BEST ACYTCCGG CCGGARGT 113 46 5.0e-008 2.1e-003 # ACTTCCGG CCGGAAGT 72 26 1.8e-006 7.6e-002 # ACCTCCGG CCGGAGGT 41 20 4.9e-003 2.1e+002 letter-probability matrix: alength= 4 w= 8 nsites= 113 E= 2.1e-003 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.362832 0.000000 0.637168 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 MOTIF STGGGKA DREME-47 # Word RC Word Pos Neg P-value E-value # BEST STGGGKA TMCCCAS 715 509 8.5e-010 3.7e-005 # GTGGGGA TCCCCAC 286 201 5.8e-005 2.5e+000 # CTGGGTA TACCCAG 103 60 4.5e-004 2.0e+001 # CTGGGGA TCCCCAG 239 188 7.3e-003 3.1e+002 # GTGGGTA TACCCAC 103 71 9.0e-003 3.9e+002 letter-probability matrix: alength= 4 w= 7 nsites= 737 E= 3.7e-005 0.000000 0.466757 0.533243 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.719132 0.280868 1.000000 0.000000 0.000000 0.000000 MOTIF AATACTGC DREME-48 # Word RC Word Pos Neg P-value E-value # BEST AATACTGC GCAGTATT 54 12 8.2e-008 3.5e-003 # AATACTGC GCAGTATT 54 12 8.2e-008 3.5e-003 letter-probability matrix: alength= 4 w= 8 nsites= 54 E= 3.5e-003 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 MOTIF AGYGAGAC DREME-49 # Word RC Word Pos Neg P-value E-value # BEST AGYGAGAC GTCTCRCT 141 66 8.9e-008 3.8e-003 # AGCGAGAC GTCTCGCT 76 28 1.3e-006 5.6e-002 # AGTGAGAC GTCTCACT 65 38 5.0e-003 2.1e+002 letter-probability matrix: alength= 4 w= 8 nsites= 142 E= 3.8e-003 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.535211 0.000000 0.464789 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 MOTIF AATAGGR DREME-50 # Word RC Word Pos Neg P-value E-value # BEST AATAGGR YCCTATT 263 157 1.0e-007 4.4e-003 # AATAGGG CCCTATT 164 98 2.5e-005 1.1e+000 # AATAGGA TCCTATT 100 59 6.9e-004 3.0e+001 letter-probability matrix: alength= 4 w= 7 nsites= 264 E= 4.4e-003 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.378788 0.000000 0.621212 0.000000 MOTIF CTCCCACC DREME-51 # Word RC Word Pos Neg P-value E-value # BEST CTCCCACC GGTGGGAG 174 91 1.7e-007 7.1e-003 # CTCCCACC GGTGGGAG 174 91 1.7e-007 7.1e-003 letter-probability matrix: alength= 4 w= 8 nsites= 175 E= 7.1e-003 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 MOTIF CATTTTM DREME-52 # Word RC Word Pos Neg P-value E-value # BEST CATTTTM KAAAATG 249 149 2.5e-007 1.1e-002 # CATTTTA TAAAATG 107 49 1.8e-006 7.9e-002 # CATTTTC GAAAATG 144 100 2.8e-003 1.2e+002 letter-probability matrix: alength= 4 w= 7 nsites= 255 E= 1.1e-002 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.427451 0.572549 0.000000 0.000000 MOTIF CTGTAYC DREME-53 # Word RC Word Pos Neg P-value E-value # BEST CTGTAYC GRTACAG 192 106 3.1e-007 1.3e-002 # CTGTATC GATACAG 84 35 3.9e-006 1.7e-001 # CTGTACC GGTACAG 109 71 2.7e-003 1.2e+002 letter-probability matrix: alength= 4 w= 7 nsites= 194 E= 1.3e-002 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.567010 0.000000 0.432990 0.000000 1.000000 0.000000 0.000000 MOTIF GCAGTGAS DREME-54 # Word RC Word Pos Neg P-value E-value # BEST GCAGTGAS STCACTGC 150 76 4.3e-007 1.9e-002 # GCAGTGAG CTCACTGC 92 46 5.3e-005 2.3e+000 # GCAGTGAC GTCACTGC 58 31 2.7e-003 1.2e+002 letter-probability matrix: alength= 4 w= 8 nsites= 150 E= 1.9e-002 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.386667 0.613333 0.000000 MOTIF GGAGGTTA DREME-55 # Word RC Word Pos Neg P-value E-value # BEST GGAGGTTA TAACCTCC 58 16 4.7e-007 2.0e-002 # GGAGGTTA TAACCTCC 58 16 4.7e-007 2.0e-002 letter-probability matrix: alength= 4 w= 8 nsites= 58 E= 2.0e-002 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 MOTIF TAATCCTA DREME-56 # Word RC Word Pos Neg P-value E-value # BEST TAATCCTA TAGGATTA 40 7 5.2e-007 2.3e-002 # TAATCCTA TAGGATTA 40 7 5.2e-007 2.3e-002 letter-probability matrix: alength= 4 w= 8 nsites= 41 E= 2.3e-002 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 MOTIF CGAGTAGC DREME-57 # Word RC Word Pos Neg P-value E-value # BEST CGAGTAGC GCTACTCG 46 10 6.1e-007 2.6e-002 # CGAGTAGC GCTACTCG 46 10 6.1e-007 2.6e-002 letter-probability matrix: alength= 4 w= 8 nsites= 46 E= 2.6e-002 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 MOTIF CAGMACCG DREME-58 # Word RC Word Pos Neg P-value E-value # BEST CAGMACCG CGGTKCTG 89 35 6.3e-007 2.7e-002 # CAGAACCG CGGTTCTG 46 18 3.0e-004 1.3e+001 # CAGCACCG CGGTGCTG 43 17 5.3e-004 2.3e+001 letter-probability matrix: alength= 4 w= 8 nsites= 89 E= 2.7e-002 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.516854 0.483146 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 MOTIF AAGCAGGG DREME-59 # Word RC Word Pos Neg P-value E-value # BEST AAGCAGGG CCCTGCTT 124 59 8.1e-007 3.5e-002 # AAGCAGGG CCCTGCTT 124 59 8.1e-007 3.5e-002 letter-probability matrix: alength= 4 w= 8 nsites= 124 E= 3.5e-002 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 MOTIF GGAGTTCM DREME-60 # Word RC Word Pos Neg P-value E-value # BEST GGAGTTCM KGAACTCC 149 77 8.6e-007 3.7e-002 # GGAGTTCC GGAACTCC 93 50 2.0e-004 8.4e+000 # GGAGTTCA TGAACTCC 56 27 9.5e-004 4.1e+001 letter-probability matrix: alength= 4 w= 8 nsites= 150 E= 3.7e-002 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.380000 0.620000 0.000000 0.000000 # Stopping reason: E-value threshold exceeded # Running time: 3480.76 seconds