Database and Motifs | High-scoring Motif Occurences | Debugging Information |
FIMO version 4.12.0, (Release date: Tue Jun 27 16:22:50 2017 -0700)
For further information on how to interpret these results or to get a copy of the FIMO software please access http://meme.nbcr.net
If you use FIMO in your research, please cite the following paper:
Charles E. Grant, Timothy L. Bailey, and William Stafford Noble,
"FIMO: Scanning for occurrences of a given motif",
Bioinformatics, 27(7):1017-1018, 2011.
[full text]
DATABASE /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeK562eGFPComparisons/TAF7-Antibody.IDR0.05.filt.narrowPeak.summitPlusMinus250bp.MemeChipResultsDefaultMax/TAF7-Antibody.IDR0.05.filt.narrowPeaksummitPlusMinus250bp.fa
Database contains 685 sequences, 342500 residues
MOTIFS /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeK562eGFPComparisons/TAF7-Antibody.IDR0.05.filt.narrowPeak.summitPlusMinus250bp.MemeChipResultsDefaultMax/dreme_out/dreme.xml (DNA)
MOTIF | WIDTH | BEST POSSIBLE MATCH |
---|---|---|
ARATGGCG | 8 | AGATGGCG |
GCGGCGGM | 8 | GCGGCGGC |
Random model letter frequencies (/srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeK562eGFPComparisons/TAF7-Antibody.IDR0.05.filt.narrowPeak.summitPlusMinus250bp.MemeChipResultsDefaultMax/background):
A 0.237 C 0.263 G 0.263 T 0.237
Motif ID | Alt ID | Sequence Name | Strand | Start | End | p-value | q-value | Matched Sequence |
---|---|---|---|---|---|---|---|---|
GCGGCGGM | DREME-2 | chr1 | + | 2227999 | 2228006 | 2.26e-05 | 0.0973 | gcggcggc |
GCGGCGGM | DREME-2 | chr1 | + | 2228002 | 2228009 | 2.26e-05 | 0.0973 | gcggcggC |
GCGGCGGM | DREME-2 | chr1 | - | 2228088 | 2228095 | 2.26e-05 | 0.0973 | GCGGCGGC |
GCGGCGGM | DREME-2 | chr1 | - | 2228091 | 2228098 | 2.26e-05 | 0.0973 | GCGGCGGC |
GCGGCGGM | DREME-2 | chr1 | + | 2228263 | 2228270 | 2.26e-05 | 0.0973 | GCGGCGGC |
GCGGCGGM | DREME-2 | chr1 | + | 2228266 | 2228273 | 2.26e-05 | 0.0973 | GCGGCGGC |
GCGGCGGM | DREME-2 | chr19 | + | 2269502 | 2269509 | 2.26e-05 | 0.0973 | gcggcggc |
GCGGCGGM | DREME-2 | chr19 | + | 2269538 | 2269545 | 2.26e-05 | 0.0973 | gcggcggc |
GCGGCGGM | DREME-2 | chr19 | + | 2269541 | 2269548 | 2.26e-05 | 0.0973 | gcggcggc |
GCGGCGGM | DREME-2 | chr19 | + | 2269722 | 2269729 | 2.26e-05 | 0.0973 | GCGGCGGC |
GCGGCGGM | DREME-2 | chr20 | - | 2470769 | 2470776 | 2.26e-05 | 0.0973 | GCGGCGGC |
GCGGCGGM | DREME-2 | chr19 | + | 3985224 | 3985231 | 2.26e-05 | 0.0973 | GCGGCGGC |
GCGGCGGM | DREME-2 | chr19 | - | 3985262 | 3985269 | 2.26e-05 | 0.0973 | GCGGCGGC |
GCGGCGGM | DREME-2 | chr19 | - | 3985338 | 3985345 | 2.26e-05 | 0.0973 | GCGGCGGC |
GCGGCGGM | DREME-2 | chr20 | - | 5610872 | 5610879 | 2.26e-05 | 0.0973 | GCGGCGGC |
GCGGCGGM | DREME-2 | chr17 | + | 8162826 | 8162833 | 2.26e-05 | 0.0973 | GCGGCGGC |
GCGGCGGM | DREME-2 | chr17 | + | 8162920 | 8162927 | 2.26e-05 | 0.0973 | GCGGCGGC |
GCGGCGGM | DREME-2 | chr17 | + | 8162923 | 8162930 | 2.26e-05 | 0.0973 | GCGGCGGC |
GCGGCGGM | DREME-2 | chr19 | - | 8321513 | 8321520 | 2.26e-05 | 0.0973 | GCGGCGGC |
GCGGCGGM | DREME-2 | chr16 | + | 9091703 | 9091710 | 2.26e-05 | 0.0973 | GCGGCGGC |
GCGGCGGM | DREME-2 | chr16 | + | 9091706 | 9091713 | 2.26e-05 | 0.0973 | GCGGCGGC |
GCGGCGGM | DREME-2 | chr16 | + | 9091709 | 9091716 | 2.26e-05 | 0.0973 | GCGGCGGC |
GCGGCGGM | DREME-2 | chr16 | + | 9091759 | 9091766 | 2.26e-05 | 0.0973 | GCGGCGGC |
GCGGCGGM | DREME-2 | chr3 | - | 9396618 | 9396625 | 2.26e-05 | 0.0973 | GCGGCGGC |
GCGGCGGM | DREME-2 | chr3 | - | 9397651 | 9397658 | 2.26e-05 | 0.0973 | GCGGCGGC |
GCGGCGGM | DREME-2 | chr3 | - | 9397654 | 9397661 | 2.26e-05 | 0.0973 | GCGGCGGC |
GCGGCGGM | DREME-2 | chr3 | - | 9397657 | 9397664 | 2.26e-05 | 0.0973 | GCGGCGGC |
GCGGCGGM | DREME-2 | chr3 | - | 9397660 | 9397667 | 2.26e-05 | 0.0973 | GCGGCGGC |
GCGGCGGM | DREME-2 | chr3 | - | 9397663 | 9397670 | 2.26e-05 | 0.0973 | GCGGCGGC |
GCGGCGGM | DREME-2 | chr2 | + | 10448294 | 10448301 | 2.26e-05 | 0.0973 | gcggcggc |
GCGGCGGM | DREME-2 | chr2 | + | 10448297 | 10448304 | 2.26e-05 | 0.0973 | gcggcggc |
GCGGCGGM | DREME-2 | chr2 | + | 10448300 | 10448307 | 2.26e-05 | 0.0973 | gcggcggc |
GCGGCGGM | DREME-2 | chr2 | + | 10448303 | 10448310 | 2.26e-05 | 0.0973 | gcggcggc |
GCGGCGGM | DREME-2 | chr12 | - | 12267379 | 12267386 | 2.26e-05 | 0.0973 | GCGGCGGC |
GCGGCGGM | DREME-2 | chr3 | + | 12557114 | 12557121 | 2.26e-05 | 0.0973 | GCGGCGGC |
GCGGCGGM | DREME-2 | chr19 | + | 12945885 | 12945892 | 2.26e-05 | 0.0973 | GCGGCGGC |
GCGGCGGM | DREME-2 | chr19 | - | 12945923 | 12945930 | 2.26e-05 | 0.0973 | GCGGCGGC |
GCGGCGGM | DREME-2 | chr19 | + | 13155643 | 13155650 | 2.26e-05 | 0.0973 | GCGGCGGC |
GCGGCGGM | DREME-2 | chr19 | - | 13155696 | 13155703 | 2.26e-05 | 0.0973 | GCGGCGGC |
GCGGCGGM | DREME-2 | chr1 | - | 16073607 | 16073614 | 2.26e-05 | 0.0973 | GCGGCGGC |
GCGGCGGM | DREME-2 | chr1 | - | 16073631 | 16073638 | 2.26e-05 | 0.0973 | GCGGCGGC |
GCGGCGGM | DREME-2 | chr22 | + | 17638769 | 17638776 | 2.26e-05 | 0.0973 | GCGGCGGC |
GCGGCGGM | DREME-2 | chr22 | - | 17638839 | 17638846 | 2.26e-05 | 0.0973 | GCGGCGGC |
GCGGCGGM | DREME-2 | chr22 | - | 17638842 | 17638849 | 2.26e-05 | 0.0973 | GCGGCGGC |
GCGGCGGM | DREME-2 | chr17 | + | 18183093 | 18183100 | 2.26e-05 | 0.0973 | gcggcggc |
GCGGCGGM | DREME-2 | chr17 | + | 18183096 | 18183103 | 2.26e-05 | 0.0973 | gcggcggc |
GCGGCGGM | DREME-2 | chr17 | + | 18183105 | 18183112 | 2.26e-05 | 0.0973 | gcggcggc |
GCGGCGGM | DREME-2 | chr6 | - | 20401940 | 20401947 | 2.26e-05 | 0.0973 | GCGGCGGC |
GCGGCGGM | DREME-2 | chr6 | - | 20401943 | 20401950 | 2.26e-05 | 0.0973 | GCGGCGGC |
GCGGCGGM | DREME-2 | chr7 | - | 23531751 | 23531758 | 2.26e-05 | 0.0973 | GCGGCGGC |
GCGGCGGM | DREME-2 | chr7 | - | 24979827 | 24979834 | 2.26e-05 | 0.0973 | GCGGCGGC |
GCGGCGGM | DREME-2 | chr1 | - | 25232167 | 25232174 | 2.26e-05 | 0.0973 | GCGGCGGC |
GCGGCGGM | DREME-2 | chr7 | - | 26200761 | 26200768 | 2.26e-05 | 0.0973 | GCGGCGGC |
GCGGCGGM | DREME-2 | chr1 | + | 26695554 | 26695561 | 2.26e-05 | 0.0973 | GCGGCGGC |
GCGGCGGM | DREME-2 | chr1 | - | 26695590 | 26695597 | 2.26e-05 | 0.0973 | GCGGCGGC |
GCGGCGGM | DREME-2 | chr1 | - | 26695593 | 26695600 | 2.26e-05 | 0.0973 | GCGGCGGC |
GCGGCGGM | DREME-2 | chr6 | - | 27867667 | 27867674 | 2.26e-05 | 0.0973 | GCGGCGGC |
GCGGCGGM | DREME-2 | chr6 | - | 27867670 | 27867677 | 2.26e-05 | 0.0973 | GCGGCGGC |
GCGGCGGM | DREME-2 | chr6 | - | 30955810 | 30955817 | 2.26e-05 | 0.0973 | GCGGCGGC |
GCGGCGGM | DREME-2 | chr16 | + | 31180250 | 31180257 | 2.26e-05 | 0.0973 | GCGGCGGC |
GCGGCGGM | DREME-2 | chr6 | - | 33272098 | 33272105 | 2.26e-05 | 0.0973 | GCGGCGGC |
GCGGCGGM | DREME-2 | chr20 | - | 35742009 | 35742016 | 2.26e-05 | 0.0973 | GCGGCGGC |
GCGGCGGM | DREME-2 | chr20 | - | 35742012 | 35742019 | 2.26e-05 | 0.0973 | GCGGCGGC |
GCGGCGGM | DREME-2 | chr20 | - | 35742015 | 35742022 | 2.26e-05 | 0.0973 | GCGGCGGC |
GCGGCGGM | DREME-2 | chr5 | + | 36242206 | 36242213 | 2.26e-05 | 0.0973 | GCGGCGGC |
GCGGCGGM | DREME-2 | chr1 | - | 37474607 | 37474614 | 2.26e-05 | 0.0973 | GCGGCGGC |
GCGGCGGM | DREME-2 | chr1 | - | 37474607 | 37474614 | 2.26e-05 | 0.0973 | GCGGCGGC |
GCGGCGGM | DREME-2 | chr6 | + | 42050550 | 42050557 | 2.26e-05 | 0.0973 | GCGGCGGC |
GCGGCGGM | DREME-2 | chr6 | - | 42782027 | 42782034 | 2.26e-05 | 0.0973 | GCGGCGGC |
GCGGCGGM | DREME-2 | chr6 | - | 42782030 | 42782037 | 2.26e-05 | 0.0973 | GCGGCGGC |
GCGGCGGM | DREME-2 | chr6 | - | 42782033 | 42782040 | 2.26e-05 | 0.0973 | GCGGCGGC |
GCGGCGGM | DREME-2 | chr6 | - | 42782036 | 42782043 | 2.26e-05 | 0.0973 | GCGGCGGC |
GCGGCGGM | DREME-2 | chr6 | - | 42782039 | 42782046 | 2.26e-05 | 0.0973 | GCGGCGGC |
GCGGCGGM | DREME-2 | chr20 | + | 45934872 | 45934879 | 2.26e-05 | 0.0973 | GCGGCGGC |
GCGGCGGM | DREME-2 | chr20 | - | 45934927 | 45934934 | 2.26e-05 | 0.0973 | GCGGCGGC |
GCGGCGGM | DREME-2 | chr20 | - | 45935035 | 45935042 | 2.26e-05 | 0.0973 | GCGGCGGC |
GCGGCGGM | DREME-2 | chr21 | - | 46324387 | 46324394 | 2.26e-05 | 0.0973 | GCGGCGGC |
GCGGCGGM | DREME-2 | chr21 | - | 46324441 | 46324448 | 2.26e-05 | 0.0973 | GCGGCGGC |
GCGGCGGM | DREME-2 | chr14 | - | 50668381 | 50668388 | 2.26e-05 | 0.0973 | GCGGCGGC |
GCGGCGGM | DREME-2 | chr12 | + | 56118305 | 56118312 | 2.26e-05 | 0.0973 | GCGGCGGC |
GCGGCGGM | DREME-2 | chr12 | + | 56118308 | 56118315 | 2.26e-05 | 0.0973 | GCGGCGGC |
GCGGCGGM | DREME-2 | chr8 | + | 58553271 | 58553278 | 2.26e-05 | 0.0973 | GCGGCGGC |
GCGGCGGM | DREME-2 | chr8 | + | 58553274 | 58553281 | 2.26e-05 | 0.0973 | GCGGCGGC |
GCGGCGGM | DREME-2 | chr20 | + | 63521203 | 63521210 | 2.26e-05 | 0.0973 | GCGGCGGC |
GCGGCGGM | DREME-2 | chr6 | + | 63572332 | 63572339 | 2.26e-05 | 0.0973 | GCGGCGGC |
GCGGCGGM | DREME-2 | chr6 | + | 63572332 | 63572339 | 2.26e-05 | 0.0973 | GCGGCGGC |
GCGGCGGM | DREME-2 | chr6 | - | 63572338 | 63572345 | 2.26e-05 | 0.0973 | GCGGCGGC |
GCGGCGGM | DREME-2 | chr6 | - | 63572338 | 63572345 | 2.26e-05 | 0.0973 | GCGGCGGC |
GCGGCGGM | DREME-2 | chr6 | - | 63572574 | 63572581 | 2.26e-05 | 0.0973 | GCGGCGGC |
GCGGCGGM | DREME-2 | chr6 | - | 63572574 | 63572581 | 2.26e-05 | 0.0973 | GCGGCGGC |
GCGGCGGM | DREME-2 | chr6 | - | 63572657 | 63572664 | 2.26e-05 | 0.0973 | GCGGCGGC |
GCGGCGGM | DREME-2 | chr5 | + | 67004156 | 67004163 | 2.26e-05 | 0.0973 | gcggcggc |
GCGGCGGM | DREME-2 | chr17 | - | 68291427 | 68291434 | 2.26e-05 | 0.0973 | GCGGCGGC |
GCGGCGGM | DREME-2 | chr5 | - | 69369938 | 69369945 | 2.26e-05 | 0.0973 | GCGGCGGC |
GCGGCGGM | DREME-2 | chr10 | - | 72692157 | 72692164 | 2.26e-05 | 0.0973 | GCGGCGGC |
GCGGCGGM | DREME-2 | chr10 | + | 72692200 | 72692207 | 2.26e-05 | 0.0973 | GCGGCGGC |
GCGGCGGM | DREME-2 | chr10 | + | 72692203 | 72692210 | 2.26e-05 | 0.0973 | GCGGCGGC |
GCGGCGGM | DREME-2 | chr6 | + | 73520785 | 73520792 | 2.26e-05 | 0.0973 | GCGGCGGC |
GCGGCGGM | DREME-2 | chr11 | + | 75399536 | 75399543 | 2.26e-05 | 0.0973 | GCGGCGGC |
GCGGCGGM | DREME-2 | chr4 | - | 77075737 | 77075744 | 2.26e-05 | 0.0973 | GCGGCGGC |
GCGGCGGM | DREME-2 | chr4 | - | 77075740 | 77075747 | 2.26e-05 | 0.0973 | GCGGCGGC |
GCGGCGGM | DREME-2 | chr5 | + | 91380099 | 91380106 | 2.26e-05 | 0.0973 | GCGGCGGC |
GCGGCGGM | DREME-2 | chr5 | + | 91380102 | 91380109 | 2.26e-05 | 0.0973 | GCGGCGGC |
GCGGCGGM | DREME-2 | chr5 | - | 91380215 | 91380222 | 2.26e-05 | 0.0973 | GCGGCGGC |
GCGGCGGM | DREME-2 | chr5 | - | 91380215 | 91380222 | 2.26e-05 | 0.0973 | GCGGCGGC |
GCGGCGGM | DREME-2 | chr5 | - | 91380218 | 91380225 | 2.26e-05 | 0.0973 | GCGGCGGC |
GCGGCGGM | DREME-2 | chr5 | - | 91380218 | 91380225 | 2.26e-05 | 0.0973 | GCGGCGGC |
GCGGCGGM | DREME-2 | chr5 | - | 91380221 | 91380228 | 2.26e-05 | 0.0973 | GCGGCGGC |
GCGGCGGM | DREME-2 | chr5 | - | 91380221 | 91380228 | 2.26e-05 | 0.0973 | GCGGCGGC |
GCGGCGGM | DREME-2 | chr5 | - | 91380224 | 91380231 | 2.26e-05 | 0.0973 | GCGGCGGC |
GCGGCGGM | DREME-2 | chr5 | - | 91380224 | 91380231 | 2.26e-05 | 0.0973 | GCGGCGGC |
GCGGCGGM | DREME-2 | chr10 | + | 99621155 | 99621162 | 2.26e-05 | 0.0973 | GCGGCGGC |
GCGGCGGM | DREME-2 | chr10 | + | 103368095 | 103368102 | 2.26e-05 | 0.0973 | GCGGCGGC |
GCGGCGGM | DREME-2 | chr10 | + | 103368125 | 103368132 | 2.26e-05 | 0.0973 | GCGGCGGC |
GCGGCGGM | DREME-2 | chr6 | + | 110875025 | 110875032 | 2.26e-05 | 0.0973 | gcggcggc |
GCGGCGGM | DREME-2 | chr6 | + | 110875028 | 110875035 | 2.26e-05 | 0.0973 | gcggcggc |
GCGGCGGM | DREME-2 | chr5 | - | 123512133 | 123512140 | 2.26e-05 | 0.0973 | GCGGCGGC |
GCGGCGGM | DREME-2 | chr5 | - | 123512136 | 123512143 | 2.26e-05 | 0.0973 | GCGGCGGC |
GCGGCGGM | DREME-2 | chr5 | + | 123512322 | 123512329 | 2.26e-05 | 0.0973 | GCGGCGGC |
GCGGCGGM | DREME-2 | chr5 | - | 123512480 | 123512487 | 2.26e-05 | 0.0973 | GCGGCGGC |
GCGGCGGM | DREME-2 | chr5 | - | 123512483 | 123512490 | 2.26e-05 | 0.0973 | GCGGCGGC |
GCGGCGGM | DREME-2 | chr9 | - | 124861931 | 124861938 | 2.26e-05 | 0.0973 | GCGGCGGC |
GCGGCGGM | DREME-2 | chr7 | - | 127392452 | 127392459 | 2.26e-05 | 0.0973 | GCGGCGGC |
GCGGCGGM | DREME-2 | chr11 | + | 130069874 | 130069881 | 2.26e-05 | 0.0973 | GCGGCGGC |
GCGGCGGM | DREME-2 | chr11 | - | 130069998 | 130070005 | 2.26e-05 | 0.0973 | GCGGCGGC |
GCGGCGGM | DREME-2 | chr9 | - | 137241342 | 137241349 | 2.26e-05 | 0.0973 | GCGGCGGC |
GCGGCGGM | DREME-2 | chr9 | - | 137241345 | 137241352 | 2.26e-05 | 0.0973 | GCGGCGGC |
GCGGCGGM | DREME-2 | chr9 | - | 137241348 | 137241355 | 2.26e-05 | 0.0973 | GCGGCGGC |
GCGGCGGM | DREME-2 | chr5 | - | 138465507 | 138465514 | 2.26e-05 | 0.0973 | GCGGCGGC |
GCGGCGGM | DREME-2 | chr5 | - | 138465510 | 138465517 | 2.26e-05 | 0.0973 | GCGGCGGC |
GCGGCGGM | DREME-2 | chr5 | - | 138465523 | 138465530 | 2.26e-05 | 0.0973 | GCGGCGGC |
GCGGCGGM | DREME-2 | chr5 | - | 138465542 | 138465549 | 2.26e-05 | 0.0973 | GCGGCGGC |
GCGGCGGM | DREME-2 | chr7 | + | 139359409 | 139359416 | 2.26e-05 | 0.0973 | GCGGCGGC |
GCGGCGGM | DREME-2 | chr7 | + | 139360144 | 139360151 | 2.26e-05 | 0.0973 | GCGGCGGC |
GCGGCGGM | DREME-2 | chr7 | + | 139360147 | 139360154 | 2.26e-05 | 0.0973 | GCGGCGGC |
GCGGCGGM | DREME-2 | chr8 | - | 144792220 | 144792227 | 2.26e-05 | 0.0973 | GCGGCGGC |
GCGGCGGM | DREME-2 | chr8 | + | 145052612 | 145052619 | 2.26e-05 | 0.0973 | GCGGCGGC |
GCGGCGGM | DREME-2 | chr7 | - | 149624681 | 149624688 | 2.26e-05 | 0.0973 | GCGGCGGC |
GCGGCGGM | DREME-2 | chr6 | - | 149718045 | 149718052 | 2.26e-05 | 0.0973 | GCGGCGGC |
GCGGCGGM | DREME-2 | chr6 | - | 149718048 | 149718055 | 2.26e-05 | 0.0973 | GCGGCGGC |
GCGGCGGM | DREME-2 | chr6 | - | 149718051 | 149718058 | 2.26e-05 | 0.0973 | GCGGCGGC |
GCGGCGGM | DREME-2 | chr6 | - | 149718082 | 149718089 | 2.26e-05 | 0.0973 | GCGGCGGC |
GCGGCGGM | DREME-2 | chr6 | - | 149718085 | 149718092 | 2.26e-05 | 0.0973 | GCGGCGGC |
GCGGCGGM | DREME-2 | chr1 | - | 150579449 | 150579456 | 2.26e-05 | 0.0973 | GCGGCGGC |
GCGGCGGM | DREME-2 | chr1 | - | 150579538 | 150579545 | 2.26e-05 | 0.0973 | GCGGCGGC |
GCGGCGGM | DREME-2 | chr1 | - | 150579541 | 150579548 | 2.26e-05 | 0.0973 | GCGGCGGC |
GCGGCGGM | DREME-2 | chrX | - | 154398523 | 154398530 | 2.26e-05 | 0.0973 | GCGGCGGC |
GCGGCGGM | DREME-2 | chrX | + | 154398640 | 154398647 | 2.26e-05 | 0.0973 | GCGGCGGC |
GCGGCGGM | DREME-2 | chr1 | - | 156282767 | 156282774 | 2.26e-05 | 0.0973 | GCGGCGGC |
GCGGCGGM | DREME-2 | chr1 | - | 156282770 | 156282777 | 2.26e-05 | 0.0973 | GCGGCGGC |
GCGGCGGM | DREME-2 | chr5 | - | 179732966 | 179732973 | 2.26e-05 | 0.0973 | GCGGCGGC |
GCGGCGGM | DREME-2 | chr5 | + | 181243801 | 181243808 | 2.26e-05 | 0.0973 | GCGGCGGC |
GCGGCGGM | DREME-2 | chr5 | - | 181243881 | 181243888 | 2.26e-05 | 0.0973 | GCGGCGGC |
GCGGCGGM | DREME-2 | chr1 | + | 222618315 | 222618322 | 2.26e-05 | 0.0973 | GCGGCGGC |
GCGGCGGM | DREME-2 | chr1 | + | 224114169 | 224114176 | 2.26e-05 | 0.0973 | gcggcggc |
GCGGCGGM | DREME-2 | chr1 | - | 2228127 | 2228134 | 4.31e-05 | 0.152 | GCGGCGGA |
GCGGCGGM | DREME-2 | chr19 | - | 5690353 | 5690360 | 4.31e-05 | 0.152 | GCGGCGGA |
GCGGCGGM | DREME-2 | chr19 | - | 11597544 | 11597551 | 4.31e-05 | 0.152 | GCGGCGGA |
GCGGCGGM | DREME-2 | chr7 | - | 12687466 | 12687473 | 4.31e-05 | 0.152 | GCGGCGGA |
GCGGCGGM | DREME-2 | chr7 | - | 25125012 | 25125019 | 4.31e-05 | 0.152 | GCGGCGGA |
GCGGCGGM | DREME-2 | chr1 | - | 25232164 | 25232171 | 4.31e-05 | 0.152 | GCGGCGGA |
GCGGCGGM | DREME-2 | chr6 | + | 26031898 | 26031905 | 4.31e-05 | 0.152 | GCGGCGGA |
GCGGCGGM | DREME-2 | chr6 | - | 26123414 | 26123421 | 4.31e-05 | 0.152 | GCGGCGGA |
GCGGCGGM | DREME-2 | chr7 | - | 26200835 | 26200842 | 4.31e-05 | 0.152 | GCGGCGGA |
GCGGCGGM | DREME-2 | chr16 | + | 31180097 | 31180104 | 4.31e-05 | 0.152 | GCGGCGGA |
GCGGCGGM | DREME-2 | chr7 | + | 35800955 | 35800962 | 4.31e-05 | 0.152 | GCGGCGGA |
GCGGCGGM | DREME-2 | chr3 | + | 41199416 | 41199423 | 4.31e-05 | 0.152 | GCGGCGGA |
GCGGCGGM | DREME-2 | chr21 | - | 46324458 | 46324465 | 4.31e-05 | 0.152 | GCGGCGGA |
GCGGCGGM | DREME-2 | chr2 | - | 47176565 | 47176572 | 4.31e-05 | 0.152 | GCGGCGGA |
GCGGCGGM | DREME-2 | chr20 | + | 50791084 | 50791091 | 4.31e-05 | 0.152 | GCGGCGGA |
GCGGCGGM | DREME-2 | chr19 | - | 58387504 | 58387511 | 4.31e-05 | 0.152 | GCGGCGGA |
GCGGCGGM | DREME-2 | chr11 | - | 62841997 | 62842004 | 4.31e-05 | 0.152 | GCGGCGGA |
GCGGCGGM | DREME-2 | chr11 | + | 65498968 | 65498975 | 4.31e-05 | 0.152 | GCGGCGGA |
GCGGCGGM | DREME-2 | chr16 | - | 70523794 | 70523801 | 4.31e-05 | 0.152 | GCGGCGGA |
GCGGCGGM | DREME-2 | chr1 | + | 93079106 | 93079113 | 4.31e-05 | 0.152 | GCGGCGGA |
GCGGCGGM | DREME-2 | chr10 | - | 103368199 | 103368206 | 4.31e-05 | 0.152 | GCGGCGGA |
GCGGCGGM | DREME-2 | chr7 | + | 104983944 | 104983951 | 4.31e-05 | 0.152 | GCGGCGGA |
GCGGCGGM | DREME-2 | chr7 | + | 104983944 | 104983951 | 4.31e-05 | 0.152 | GCGGCGGA |
GCGGCGGM | DREME-2 | chr2 | - | 112275433 | 112275440 | 4.31e-05 | 0.152 | GCGGCGGA |
GCGGCGGM | DREME-2 | chr9 | + | 133031014 | 133031021 | 4.31e-05 | 0.152 | GCGGCGGA |
GCGGCGGM | DREME-2 | chr5 | - | 138465520 | 138465527 | 4.31e-05 | 0.152 | GCGGCGGA |
GCGGCGGM | DREME-2 | chr5 | - | 138465539 | 138465546 | 4.31e-05 | 0.152 | GCGGCGGA |
GCGGCGGM | DREME-2 | chr8 | + | 144792321 | 144792328 | 4.31e-05 | 0.152 | GCGGCGGA |
GCGGCGGM | DREME-2 | chr1 | + | 145465480 | 145465487 | 4.31e-05 | 0.152 | GCGGCGGA |
GCGGCGGM | DREME-2 | chr1 | + | 148038611 | 148038618 | 4.31e-05 | 0.152 | GCGGCGGA |
GCGGCGGM | DREME-2 | chr1 | - | 148263770 | 148263777 | 4.31e-05 | 0.152 | GCGGCGGA |
GCGGCGGM | DREME-2 | chr1 | + | 153990660 | 153990667 | 4.31e-05 | 0.152 | GCGGCGGA |
GCGGCGGM | DREME-2 | chr3 | - | 185937934 | 185937941 | 4.31e-05 | 0.152 | GCGGCGGA |
GCGGCGGM | DREME-2 | chr1 | + | 224114138 | 224114145 | 4.31e-05 | 0.152 | gcggcgga |
GCGGCGGM | DREME-2 | chr16 | - | 2155441 | 2155448 | 8.61e-05 | 0.211 | GCGGCGGG |
GCGGCGGM | DREME-2 | chr1 | + | 2228190 | 2228197 | 8.61e-05 | 0.211 | GCGGCGGG |
GCGGCGGM | DREME-2 | chr20 | - | 2470766 | 2470773 | 8.61e-05 | 0.211 | GCGGCGGG |
GCGGCGGM | DREME-2 | chr11 | - | 2700025 | 2700032 | 8.61e-05 | 0.211 | GCGGCGGG |
GCGGCGGM | DREME-2 | chr11 | + | 2700089 | 2700096 | 8.61e-05 | 0.211 | GCGGCGGG |
GCGGCGGM | DREME-2 | chr18 | + | 3448370 | 3448377 | 8.61e-05 | 0.211 | GCGGCGGG |
GCGGCGGM | DREME-2 | chr19 | - | 3985259 | 3985266 | 8.61e-05 | 0.211 | GCGGCGGG |
GCGGCGGM | DREME-2 | chr19 | - | 3985335 | 3985342 | 8.61e-05 | 0.211 | GCGGCGGG |
GCGGCGGM | DREME-2 | chr20 | - | 5610758 | 5610765 | 8.61e-05 | 0.211 | GCGGCGGG |
GCGGCGGM | DREME-2 | chr12 | + | 6891232 | 6891239 | 8.61e-05 | 0.211 | GCGGCGGT |
GCGGCGGM | DREME-2 | chr19 | - | 8321510 | 8321517 | 8.61e-05 | 0.211 | GCGGCGGT |
GCGGCGGM | DREME-2 | chr1 | - | 8878177 | 8878184 | 8.61e-05 | 0.211 | GCGGCGGT |
GCGGCGGM | DREME-2 | chr3 | + | 9397552 | 9397559 | 8.61e-05 | 0.211 | GCGGCGGG |
GCGGCGGM | DREME-2 | chr5 | - | 10353877 | 10353884 | 8.61e-05 | 0.211 | GCGGCGGT |
GCGGCGGM | DREME-2 | chr2 | - | 10448208 | 10448215 | 8.61e-05 | 0.211 | GCGGCGGG |
GCGGCGGM | DREME-2 | chr2 | + | 10448287 | 10448294 | 8.61e-05 | 0.211 | gcggcggg |
GCGGCGGM | DREME-2 | chr2 | + | 10448631 | 10448638 | 8.61e-05 | 0.211 | GCGGCGGT |
GCGGCGGM | DREME-2 | chr1 | - | 16073652 | 16073659 | 8.61e-05 | 0.211 | GCGGCGGG |
GCGGCGGM | DREME-2 | chr1 | + | 16073687 | 16073694 | 8.61e-05 | 0.211 | gcggcggg |
GCGGCGGM | DREME-2 | chr22 | + | 17638772 | 17638779 | 8.61e-05 | 0.211 | GCGGCGGT |
GCGGCGGM | DREME-2 | chr22 | - | 17638807 | 17638814 | 8.61e-05 | 0.211 | GCGGCGGT |
GCGGCGGM | DREME-2 | chr9 | - | 19379988 | 19379995 | 8.61e-05 | 0.211 | GCGGCGGG |
GCGGCGGM | DREME-2 | chr16 | + | 23678781 | 23678788 | 8.61e-05 | 0.211 | GCGGCGGG |
GCGGCGGM | DREME-2 | chr1 | - | 25430169 | 25430176 | 8.61e-05 | 0.211 | GCGGCGGT |
GCGGCGGM | DREME-2 | chr21 | - | 25607267 | 25607274 | 8.61e-05 | 0.211 | GCGGCGGT |
GCGGCGGM | DREME-2 | chr6 | - | 26033404 | 26033411 | 8.61e-05 | 0.211 | GCGGCGGT |
GCGGCGGM | DREME-2 | chr6 | - | 26199079 | 26199086 | 8.61e-05 | 0.211 | GCGGCGGT |
GCGGCGGM | DREME-2 | chr6 | - | 26285370 | 26285377 | 8.61e-05 | 0.211 | GCGGCGGT |
GCGGCGGM | DREME-2 | chr6 | - | 27133877 | 27133884 | 8.61e-05 | 0.211 | GCGGCGGG |
GCGGCGGM | DREME-2 | chr1 | + | 27155178 | 27155185 | 8.61e-05 | 0.211 | GCGGCGGG |
GCGGCGGM | DREME-2 | chr6 | - | 27892985 | 27892992 | 8.61e-05 | 0.211 | GCGGCGGT |
GCGGCGGM | DREME-2 | chr1 | + | 28581857 | 28581864 | 8.61e-05 | 0.211 | GCGGCGGG |
GCGGCGGM | DREME-2 | chr6 | + | 30955464 | 30955471 | 8.61e-05 | 0.211 | GCGGCGGG |
GCGGCGGM | DREME-2 | chr6 | + | 37257813 | 37257820 | 8.61e-05 | 0.211 | GCGGCGGG |
GCGGCGGM | DREME-2 | chr1 | + | 37474636 | 37474643 | 8.61e-05 | 0.211 | gcggcggg |
GCGGCGGM | DREME-2 | chr1 | + | 37474636 | 37474643 | 8.61e-05 | 0.211 | gcggcggg |
GCGGCGGM | DREME-2 | chr19 | + | 38374799 | 38374806 | 8.61e-05 | 0.211 | GCGGCGGT |
GCGGCGGM | DREME-2 | chr7 | + | 40134726 | 40134733 | 8.61e-05 | 0.211 | GCGGCGGG |
GCGGCGGM | DREME-2 | chr3 | + | 41199643 | 41199650 | 8.61e-05 | 0.211 | GCGGCGGG |
GCGGCGGM | DREME-2 | chr6 | - | 42782024 | 42782031 | 8.61e-05 | 0.211 | GCGGCGGG |
GCGGCGGM | DREME-2 | chr10 | + | 42782854 | 42782861 | 8.61e-05 | 0.211 | GCGGCGGT |
GCGGCGGM | DREME-2 | chr17 | + | 45148352 | 45148359 | 8.61e-05 | 0.211 | GCGGCGGG |
GCGGCGGM | DREME-2 | chr20 | + | 45935100 | 45935107 | 8.61e-05 | 0.211 | GCGGCGGG |
GCGGCGGM | DREME-2 | chr21 | - | 46324484 | 46324491 | 8.61e-05 | 0.211 | GCGGCGGG |
GCGGCGGM | DREME-2 | chr14 | + | 50668425 | 50668432 | 8.61e-05 | 0.211 | gcggcggg |
GCGGCGGM | DREME-2 | chr19 | - | 58387344 | 58387351 | 8.61e-05 | 0.211 | GCGGCGGT |
GCGGCGGM | DREME-2 | chr17 | - | 59619799 | 59619806 | 8.61e-05 | 0.211 | GCGGCGGG |
GCGGCGGM | DREME-2 | chr2 | - | 61538162 | 61538169 | 8.61e-05 | 0.211 | GCGGCGGT |
GCGGCGGM | DREME-2 | chr2 | - | 61538471 | 61538478 | 8.61e-05 | 0.211 | GCGGCGGG |
GCGGCGGM | DREME-2 | chr6 | - | 63572571 | 63572578 | 8.61e-05 | 0.211 | GCGGCGGG |
GCGGCGGM | DREME-2 | chr6 | - | 63572571 | 63572578 | 8.61e-05 | 0.211 | GCGGCGGG |
GCGGCGGM | DREME-2 | chr6 | - | 63572595 | 63572602 | 8.61e-05 | 0.211 | GCGGCGGT |
GCGGCGGM | DREME-2 | chr6 | - | 63572615 | 63572622 | 8.61e-05 | 0.211 | GCGGCGGT |
GCGGCGGM | DREME-2 | chr10 | + | 72692206 | 72692213 | 8.61e-05 | 0.211 | GCGGCGGG |
GCGGCGGM | DREME-2 | chr17 | - | 75785004 | 75785011 | 8.61e-05 | 0.211 | GCGGCGGG |
GCGGCGGM | DREME-2 | chr4 | + | 77075787 | 77075794 | 8.61e-05 | 0.211 | GCGGCGGG |
GCGGCGGM | DREME-2 | chr4 | - | 77076113 | 77076120 | 8.61e-05 | 0.211 | GCGGCGGG |
GCGGCGGM | DREME-2 | chr15 | + | 88621480 | 88621487 | 8.61e-05 | 0.211 | GCGGCGGG |
GCGGCGGM | DREME-2 | chr15 | - | 90233888 | 90233895 | 8.61e-05 | 0.211 | GCGGCGGG |
GCGGCGGM | DREME-2 | chr4 | - | 99949987 | 99949994 | 8.61e-05 | 0.211 | GCGGCGGG |
GCGGCGGM | DREME-2 | chr10 | + | 103368128 | 103368135 | 8.61e-05 | 0.211 | GCGGCGGG |
GCGGCGGM | DREME-2 | chr10 | - | 103368232 | 103368239 | 8.61e-05 | 0.211 | GCGGCGGG |
GCGGCGGM | DREME-2 | chr6 | + | 110875037 | 110875044 | 8.61e-05 | 0.211 | gcggcggG |
GCGGCGGM | DREME-2 | chr2 | + | 112275271 | 112275278 | 8.61e-05 | 0.211 | GCGGCGGG |
GCGGCGGM | DREME-2 | chr1 | + | 120942567 | 120942574 | 8.61e-05 | 0.211 | GCGGCGGG |
GCGGCGGM | DREME-2 | chr5 | + | 123512325 | 123512332 | 8.61e-05 | 0.211 | GCGGCGGT |
GCGGCGGM | DREME-2 | chr9 | + | 124861996 | 124862003 | 8.61e-05 | 0.211 | GCGGCGGG |
GCGGCGGM | DREME-2 | chr3 | - | 124887153 | 124887160 | 8.61e-05 | 0.211 | GCGGCGGG |
GCGGCGGM | DREME-2 | chr7 | - | 127392642 | 127392649 | 8.61e-05 | 0.211 | GCGGCGGT |
GCGGCGGM | DREME-2 | chr7 | - | 127392847 | 127392854 | 8.61e-05 | 0.211 | GCGGCGGG |
GCGGCGGM | DREME-2 | chr6 | - | 136290132 | 136290139 | 8.61e-05 | 0.211 | GCGGCGGT |
GCGGCGGM | DREME-2 | chr9 | - | 137241339 | 137241346 | 8.61e-05 | 0.211 | GCGGCGGG |
GCGGCGGM | DREME-2 | chr5 | + | 138465975 | 138465982 | 8.61e-05 | 0.211 | gcggcggg |
GCGGCGGM | DREME-2 | chr5 | + | 138465975 | 138465982 | 8.61e-05 | 0.211 | gcggcggg |
GCGGCGGM | DREME-2 | chr1 | + | 148402682 | 148402689 | 8.61e-05 | 0.211 | GCGGCGGG |
GCGGCGGM | DREME-2 | chr1 | + | 149636733 | 149636740 | 8.61e-05 | 0.211 | GCGGCGGG |
GCGGCGGM | DREME-2 | chr6 | - | 149718042 | 149718049 | 8.61e-05 | 0.211 | GCGGCGGT |
GCGGCGGM | DREME-2 | chr1 | - | 160343535 | 160343542 | 8.61e-05 | 0.211 | GCGGCGGG |
GCGGCGGM | DREME-2 | chr1 | - | 168225867 | 168225874 | 8.61e-05 | 0.211 | GCGGCGGG |
GCGGCGGM | DREME-2 | chr5 | - | 176837655 | 176837662 | 8.61e-05 | 0.211 | GCGGCGGG |
GCGGCGGM | DREME-2 | chr5 | + | 179732854 | 179732861 | 8.61e-05 | 0.211 | GCGGCGGT |
GCGGCGGM | DREME-2 | chr5 | - | 179732963 | 179732970 | 8.61e-05 | 0.211 | GCGGCGGG |
GCGGCGGM | DREME-2 | chr3 | + | 197950173 | 197950180 | 8.61e-05 | 0.211 | GCGGCGGG |
Command line:
/software/meme/4.12.0/bin/fimo --parse-genomic-coord --verbosity 1 --oc /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeK562eGFPComparisons/TAF7-Antibody.IDR0.05.filt.narrowPeak.summitPlusMinus250bp.MemeChipResultsDefaultMax/fimo_out_5 --bgfile /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeK562eGFPComparisons/TAF7-Antibody.IDR0.05.filt.narrowPeak.summitPlusMinus250bp.MemeChipResultsDefaultMax/background --motif GCGGCGGM /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeK562eGFPComparisons/TAF7-Antibody.IDR0.05.filt.narrowPeak.summitPlusMinus250bp.MemeChipResultsDefaultMax/dreme_out/dreme.xml /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeK562eGFPComparisons/TAF7-Antibody.IDR0.05.filt.narrowPeak.summitPlusMinus250bp.MemeChipResultsDefaultMax/TAF7-Antibody.IDR0.05.filt.narrowPeaksummitPlusMinus250bp.fa
Settings:
output_directory = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeK562eGFPComparisons/TAF7-Antibody.IDR0.05.filt.narrowPeak.summitPlusMinus250bp.MemeChipResultsDefaultMax/fimo_out_5 | MEME file name = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeK562eGFPComparisons/TAF7-Antibody.IDR0.05.filt.narrowPeak.summitPlusMinus250bp.MemeChipResultsDefaultMax/dreme_out/dreme.xml | sequence file name = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeK562eGFPComparisons/TAF7-Antibody.IDR0.05.filt.narrowPeak.summitPlusMinus250bp.MemeChipResultsDefaultMax/TAF7-Antibody.IDR0.05.filt.narrowPeaksummitPlusMinus250bp.fa |
background file name = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeK562eGFPComparisons/TAF7-Antibody.IDR0.05.filt.narrowPeak.summitPlusMinus250bp.MemeChipResultsDefaultMax/background | alphabet = DNA | max stored scores = 100000 |
allow clobber = true | compute q-values = true | parse genomic coord. = true |
text only = false | scan both strands = true | max strand = false |
threshold type = p-value | output theshold = 0.0001 | pseudocount = 0.1 |
alpha = 1 | verbosity = 1 |
This information can be useful in the event you wish to report a problem with the FIMO software.