# DREME 4.12.0 # command: dreme -v 1 -oc /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeK562eGFPComparisons/NR2C1.IDR0.05.filt.narrowPeak.summitPlusMinus250bp.MemeChipResultsDefaultMax/dreme_out -png -dna -p /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeK562eGFPComparisons/NR2C1.IDR0.05.filt.narrowPeak.summitPlusMinus250bp.MemeChipResultsDefaultMax/seqs-centered -n /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeK562eGFPComparisons/NR2C1.IDR0.05.filt.narrowPeak.summitPlusMinus250bp.MemeChipResultsDefaultMax/seqs-shuffled # positives: 24847 from /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeK562eGFPComparisons/NR2C1.IDR0.05.filt.narrowPeak.summitPlusMinus250bp.MemeChipResultsDefaultMax/seqs-centered (Wed Nov 22 12:43:46 PST 2017) # negatives: 24847 from /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeK562eGFPComparisons/NR2C1.IDR0.05.filt.narrowPeak.summitPlusMinus250bp.MemeChipResultsDefaultMax/seqs-shuffled (Wed Nov 22 12:43:46 PST 2017) # host: indra # when: Wed Nov 22 13:00:00 PST 2017 MEME version 4.12.0 ALPHABET "DNA" DNA-LIKE A "Adenine" CC0000 ~ T "Thymine" 008000 C "Cytosine" 0000CC ~ G "Guanine" FFB300 N "Any base" = ACGT X = ACGT . = ACGT V "Not T" = ACG H "Not G" = ACT D "Not C" = AGT B "Not A" = CGT M "Amino" = AC R "Purine" = AG W "Weak" = AT S "Strong" = CG Y "Pyrimidine" = CT K "Keto" = GT U = T END ALPHABET strands: + - Background letter frequencies (from dataset): A 0.241 C 0.259 G 0.260 T 0.241 MOTIF RRGGTCA DREME-1 # Word RC Word Pos Neg P-value E-value # BEST RRGGTCA TGACCYY 7061 1986 4.5e-796 2.1e-791 # GAGGTCA TGACCTC 2759 498 1.0e-401 4.6e-397 # AAGGTCA TGACCTT 2447 461 7.5e-344 3.4e-339 # GGGGTCA TGACCCC 1581 582 6.7e-111 3.1e-106 # AGGGTCA TGACCCT 1235 530 2.6e-067 1.2e-062 letter-probability matrix: alength= 4 w= 7 nsites= 8677 E= 2.1e-791 0.452576 0.000000 0.547424 0.000000 0.645615 0.000000 0.354385 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 MOTIF TTATCW DREME-2 # Word RC Word Pos Neg P-value E-value # BEST TTATCW WGATAA 4272 1585 3.3e-316 1.5e-311 # TTATCT AGATAA 2804 841 9.7e-263 4.4e-258 # TTATCA TGATAA 1734 777 1.1e-087 4.9e-083 letter-probability matrix: alength= 4 w= 6 nsites= 4910 E= 1.5e-311 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.375153 0.000000 0.000000 0.624847 MOTIF CAANATGG DREME-3 # Word RC Word Pos Neg P-value E-value # BEST CAANATGG CCATNTTG 2014 376 2.4e-282 1.1e-277 # CAAGATGG CCATCTTG 1039 120 3.0e-187 1.3e-182 # CAAAATGG CCATTTTG 516 113 1.9e-063 8.6e-059 # CAACATGG CCATGTTG 386 98 4.2e-042 1.9e-037 # CAATATGG CCATATTG 107 46 4.3e-007 1.9e-002 letter-probability matrix: alength= 4 w= 8 nsites= 2082 E= 1.1e-277 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.252642 0.185879 0.509606 0.051873 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 MOTIF MGGAAGY DREME-4 # Word RC Word Pos Neg P-value E-value # BEST MGGAAGY RCTTCCK 3241 1243 7.3e-222 3.3e-217 # CGGAAGT ACTTCCG 816 116 1.0e-132 4.5e-128 # AGGAAGT ACTTCCT 1203 445 2.1e-083 9.3e-079 # CGGAAGC GCTTCCG 631 186 1.5e-058 7.0e-054 # AGGAAGC GCTTCCT 858 516 3.4e-021 1.5e-016 letter-probability matrix: alength= 4 w= 7 nsites= 3707 E= 3.3e-217 0.584839 0.415161 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.413542 0.000000 0.586458 MOTIF RAAATR DREME-5 # Word RC Word Pos Neg P-value E-value # BEST RAAATR YATTTY 5977 3733 2.1e-143 9.4e-139 # AAAATA TATTTT 1672 909 1.4e-054 6.3e-050 # GAAATG CATTTC 2007 1174 2.4e-053 1.1e-048 # AAAATG CATTTT 2033 1271 2.2e-043 9.9e-039 # GAAATA TATTTC 966 715 2.6e-010 1.1e-005 letter-probability matrix: alength= 4 w= 6 nsites= 7004 E= 9.4e-139 0.557539 0.000000 0.442461 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.394774 0.000000 0.605226 0.000000 MOTIF GGAYTACA DREME-6 # Word RC Word Pos Neg P-value E-value # BEST GGAYTACA TGTARTCC 696 82 4.4e-124 1.9e-119 # GGATTACA TGTAATCC 485 45 2.1e-095 9.3e-091 # GGACTACA TGTAGTCC 211 37 3.3e-031 1.5e-026 letter-probability matrix: alength= 4 w= 8 nsites= 701 E= 1.9e-119 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.306705 0.000000 0.693295 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 MOTIF TGACBYA DREME-7 # Word RC Word Pos Neg P-value E-value # BEST TGACBYA TRVGTCA 3037 1586 4.7e-113 2.1e-108 # TGACTCA TGAGTCA 1272 484 1.3e-084 5.9e-080 # TGACCTA TAGGTCA 607 285 2.8e-028 1.2e-023 # TGACCCA TGGGTCA 729 481 2.7e-013 1.2e-008 # TGACGTA TACGTCA 103 43 3.6e-007 1.6e-002 # TGACGCA TGCGTCA 182 101 7.9e-007 3.5e-002 # TGACTTA TAAGTCA 289 229 4.5e-003 2.0e+002 letter-probability matrix: alength= 4 w= 7 nsites= 3304 E= 2.1e-108 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.418584 0.086864 0.494552 0.000000 0.688257 0.000000 0.311743 1.000000 0.000000 0.000000 0.000000 MOTIF AGGCYGAG DREME-8 # Word RC Word Pos Neg P-value E-value # BEST AGGCYGAG CTCRGCCT 1037 287 1.2e-102 5.3e-098 # AGGCTGAG CTCAGCCT 765 206 7.4e-078 3.3e-073 # AGGCCGAG CTCGGCCT 276 81 1.7e-026 7.7e-022 letter-probability matrix: alength= 4 w= 8 nsites= 1047 E= 5.3e-098 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.266476 0.000000 0.733524 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 MOTIF CACGTG DREME-9 # Word RC Word Pos Neg P-value E-value # BEST CACGTG CACGTG 830 230 5.1e-082 2.2e-077 # CACGTG CACGTG 830 230 5.1e-082 2.2e-077 letter-probability matrix: alength= 4 w= 6 nsites= 860 E= 2.2e-077 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 MOTIF CMCAGC DREME-10 # Word RC Word Pos Neg P-value E-value # BEST CMCAGC GCTGKG 5523 3919 1.2e-075 5.4e-071 # CCCAGC GCTGGG 3550 2410 2.5e-056 1.1e-051 # CACAGC GCTGTG 2306 1679 1.9e-025 8.3e-021 letter-probability matrix: alength= 4 w= 6 nsites= 6277 E= 5.4e-071 0.000000 1.000000 0.000000 0.000000 0.384101 0.615899 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 MOTIF RGGTYA DREME-11 # Word RC Word Pos Neg P-value E-value # BEST RGGTYA TRACCY 3575 2295 1.7e-071 7.6e-067 # AGGTCA TGACCT 1101 603 2.8e-035 1.2e-030 # AGGTTA TAACCT 1328 829 1.7e-028 7.4e-024 # GGGTCA TGACCC 427 183 5.3e-024 2.3e-019 # GGGTTA TAACCC 946 755 1.4e-006 5.9e-002 letter-probability matrix: alength= 4 w= 6 nsites= 4076 E= 7.6e-067 0.616290 0.000000 0.383710 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.386163 0.000000 0.613837 1.000000 0.000000 0.000000 0.000000 MOTIF RGTTCAAR DREME-12 # Word RC Word Pos Neg P-value E-value # BEST RGTTCAAR YTTGAACY 1006 434 2.5e-054 1.1e-049 # GGTTCAAA TTTGAACC 307 103 3.9e-025 1.7e-020 # AGTTCAAG CTTGAACT 305 125 6.8e-019 3.0e-014 # AGTTCAAA TTTGAACT 222 108 1.5e-010 6.3e-006 # GGTTCAAG CTTGAACC 182 98 2.7e-007 1.2e-002 letter-probability matrix: alength= 4 w= 8 nsites= 1017 E= 1.1e-049 0.520157 0.000000 0.479843 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.520157 0.000000 0.479843 0.000000 MOTIF ACTTTGGG DREME-13 # Word RC Word Pos Neg P-value E-value # BEST ACTTTGGG CCCAAAGT 441 102 5.1e-052 2.2e-047 # ACTTTGGG CCCAAAGT 441 102 5.1e-052 2.2e-047 letter-probability matrix: alength= 4 w= 8 nsites= 442 E= 2.2e-047 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 MOTIF AGTBRCTC DREME-14 # Word RC Word Pos Neg P-value E-value # BEST AGTBRCTC GAGYVACT 973 442 1.0e-047 4.4e-043 # AGTTGCTC GAGCAACT 302 95 1.0e-026 4.4e-022 # AGTCACTC GAGTGACT 260 103 3.4e-017 1.5e-012 # AGTGGCTC GAGCCACT 191 117 1.4e-005 6.0e-001 # AGTCGCTC GAGCGACT 84 38 1.9e-005 8.1e-001 # AGTGACTC GAGTCACT 115 68 3.1e-004 1.3e+001 # AGTTACTC GAGTAACT 68 41 6.2e-003 2.7e+002 letter-probability matrix: alength= 4 w= 8 nsites= 981 E= 4.4e-043 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.328236 0.294597 0.377166 0.410805 0.000000 0.589195 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 MOTIF CAGCSTGG DREME-15 # Word RC Word Pos Neg P-value E-value # BEST CAGCSTGG CCASGCTG 601 208 5.5e-046 2.4e-041 # CAGCCTGG CCAGGCTG 533 168 5.6e-046 2.4e-041 # CAGCGTGG CCACGCTG 68 40 4.5e-003 2.0e+002 letter-probability matrix: alength= 4 w= 8 nsites= 608 E= 2.4e-041 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.881579 0.118421 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 MOTIF CTSTACTA DREME-16 # Word RC Word Pos Neg P-value E-value # BEST CTSTACTA TAGTASAG 321 62 7.8e-044 3.4e-039 # CTCTACTA TAGTAGAG 241 29 2.9e-043 1.3e-038 # CTGTACTA TAGTACAG 81 33 3.9e-006 1.7e-001 letter-probability matrix: alength= 4 w= 8 nsites= 322 E= 3.4e-039 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.748447 0.251553 0.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 MOTIF VGGAAR DREME-17 # Word RC Word Pos Neg P-value E-value # BEST VGGAAR YTTCCB 8180 6779 5.2e-043 2.2e-038 # CGGAAG CTTCCG 678 404 1.7e-017 7.2e-013 # GGGAAG CTTCCC 2717 2190 1.2e-015 5.3e-011 # AGGAAG CTTCCT 1757 1338 3.9e-015 1.7e-010 # AGGAAA TTTCCT 2135 1729 5.6e-012 2.4e-007 # CGGAAA TTTCCG 716 511 1.7e-009 7.4e-005 # GGGAAA TTTCCC 1795 1555 9.4e-006 4.1e-001 letter-probability matrix: alength= 4 w= 6 nsites= 10207 E= 2.2e-038 0.392770 0.142157 0.465073 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.472519 0.000000 0.527481 0.000000 MOTIF GTGAKCCR DREME-18 # Word RC Word Pos Neg P-value E-value # BEST GTGAKCCR YGGMTCAC 598 229 1.1e-039 4.8e-035 # GTGATCCG CGGATCAC 120 18 4.9e-020 2.1e-015 # GTGAGCCA TGGCTCAC 272 108 7.4e-018 3.2e-013 # GTGATCCA TGGATCAC 153 64 6.3e-010 2.7e-005 # GTGAGCCG CGGCTCAC 89 40 9.3e-006 4.0e-001 letter-probability matrix: alength= 4 w= 8 nsites= 637 E= 4.8e-035 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.569859 0.430141 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.671900 0.000000 0.328100 0.000000 MOTIF MAAAATTA DREME-19 # Word RC Word Pos Neg P-value E-value # BEST MAAAATTA TAATTTTK 404 124 2.9e-036 1.3e-031 # AAAAATTA TAATTTTT 291 66 2.4e-035 1.0e-030 # CAAAATTA TAATTTTG 114 58 1.1e-005 4.9e-001 letter-probability matrix: alength= 4 w= 8 nsites= 405 E= 1.3e-031 0.718519 0.281481 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 MOTIF CCTCTGMC DREME-20 # Word RC Word Pos Neg P-value E-value # BEST CCTCTGMC GKCAGAGG 759 371 3.1e-032 1.3e-027 # CCTCTGAC GTCAGAGG 390 133 6.9e-031 3.0e-026 # CCTCTGCC GGCAGAGG 371 239 4.2e-008 1.8e-003 letter-probability matrix: alength= 4 w= 8 nsites= 768 E= 1.3e-027 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.507812 0.492188 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 MOTIF CCSAGTAG DREME-21 # Word RC Word Pos Neg P-value E-value # BEST CCSAGTAG CTACTSGG 324 93 1.5e-031 6.3e-027 # CCCAGTAG CTACTGGG 268 75 4.7e-027 2.0e-022 # CCGAGTAG CTACTCGG 56 18 5.5e-006 2.4e-001 letter-probability matrix: alength= 4 w= 8 nsites= 324 E= 6.3e-027 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.827160 0.172840 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 MOTIF GCCATSTK DREME-22 # Word RC Word Pos Neg P-value E-value # BEST GCCATSTK MASATGGC 626 287 1.6e-030 7.0e-026 # GCCATGTT AACATGGC 120 40 8.2e-011 3.5e-006 # GCCATCTT AAGATGGC 133 48 9.2e-011 4.0e-006 # GCCATGTG CACATGGC 196 96 2.2e-009 9.6e-005 # GCCATCTG CAGATGGC 181 104 2.8e-006 1.2e-001 letter-probability matrix: alength= 4 w= 8 nsites= 632 E= 7.0e-026 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.496835 0.503165 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.599684 0.400316 MOTIF TGATGHAA DREME-23 # Word RC Word Pos Neg P-value E-value # BEST TGATGHAA TTDCATCA 517 213 9.6e-031 4.2e-026 # TGATGCAA TTGCATCA 261 94 9.9e-020 4.3e-015 # TGATGTAA TTACATCA 114 37 1.2e-010 5.1e-006 # TGATGAAA TTTCATCA 146 82 1.3e-005 5.6e-001 letter-probability matrix: alength= 4 w= 8 nsites= 525 E= 4.2e-026 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.278095 0.502857 0.000000 0.219048 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 MOTIF CCMCRCCC DREME-24 # Word RC Word Pos Neg P-value E-value # BEST CCMCRCCC GGGYGKGG 1059 604 2.3e-030 9.7e-026 # CCCCGCCC GGGCGGGG 327 156 2.0e-015 8.6e-011 # CCCCACCC GGGTGGGG 397 224 1.4e-012 5.9e-008 # CCACGCCC GGGCGTGG 130 73 3.7e-005 1.6e+000 # CCACACCC GGGTGTGG 238 161 6.4e-005 2.8e+000 letter-probability matrix: alength= 4 w= 8 nsites= 1102 E= 9.7e-026 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.335753 0.664247 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.578947 0.000000 0.421053 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 MOTIF ATTCCCAG DREME-25 # Word RC Word Pos Neg P-value E-value # BEST ATTCCCAG CTGGGAAT 265 68 4.5e-029 1.9e-024 # ATTCCCAG CTGGGAAT 265 68 4.5e-029 1.9e-024 letter-probability matrix: alength= 4 w= 8 nsites= 265 E= 1.9e-024 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 MOTIF RAACTACA DREME-26 # Word RC Word Pos Neg P-value E-value # BEST RAACTACA TGTAGTTY 285 96 2.5e-023 1.1e-018 # GAACTACA TGTAGTTC 168 45 3.0e-018 1.3e-013 # AAACTACA TGTAGTTT 122 51 3.2e-008 1.4e-003 letter-probability matrix: alength= 4 w= 8 nsites= 295 E= 1.1e-018 0.416949 0.000000 0.583051 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 MOTIF AAACCCCR DREME-27 # Word RC Word Pos Neg P-value E-value # BEST AAACCCCR YGGGGTTT 297 110 2.1e-021 8.9e-017 # AAACCCCG CGGGGTTT 125 38 2.3e-012 9.9e-008 # AAACCCCA TGGGGTTT 172 72 5.8e-011 2.5e-006 letter-probability matrix: alength= 4 w= 8 nsites= 297 E= 8.9e-017 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.579125 0.000000 0.420875 0.000000 MOTIF TGACGTCA DREME-28 # Word RC Word Pos Neg P-value E-value # BEST TGACGTCA TGACGTCA 85 5 3.5e-020 1.5e-015 # TGACGTCA TGACGTCA 85 5 3.5e-020 1.5e-015 letter-probability matrix: alength= 4 w= 8 nsites= 92 E= 1.5e-015 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 MOTIF CKCCKCC DREME-29 # Word RC Word Pos Neg P-value E-value # BEST CKCCKCC GGMGGMG 2025 1509 1.1e-019 4.7e-015 # CTCCGCC GGCGGAG 438 279 1.2e-009 5.2e-005 # CGCCTCC GGAGGCG 454 303 1.8e-008 7.7e-004 # CGCCGCC GGCGGCG 395 258 3.8e-008 1.6e-003 # CTCCTCC GGAGGAG 976 769 2.5e-007 1.1e-002 letter-probability matrix: alength= 4 w= 7 nsites= 2240 E= 4.7e-015 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.374107 0.625893 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.361607 0.638393 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 MOTIF RTAAAYA DREME-30 # Word RC Word Pos Neg P-value E-value # BEST RTAAAYA TRTTTAY 893 560 3.4e-019 1.5e-014 # GTAAACA TGTTTAC 320 171 6.7e-012 2.9e-007 # ATAAATA TATTTAT 186 97 6.2e-008 2.7e-003 # ATAAACA TGTTTAT 242 183 2.3e-003 1.0e+002 # GTAAATA TATTTAC 168 124 5.7e-003 2.5e+002 letter-probability matrix: alength= 4 w= 7 nsites= 926 E= 1.5e-014 0.469762 0.000000 0.530238 0.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.609071 0.000000 0.390929 1.000000 0.000000 0.000000 0.000000 MOTIF AGGCCMAG DREME-31 # Word RC Word Pos Neg P-value E-value # BEST AGGCCMAG CTKGGCCT 534 295 2.4e-017 1.0e-012 # AGGCCAAG CTTGGCCT 314 155 6.8e-014 2.9e-009 # AGGCCCAG CTGGGCCT 225 142 8.0e-006 3.4e-001 letter-probability matrix: alength= 4 w= 8 nsites= 543 E= 1.0e-012 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.583794 0.416206 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 MOTIF BCACATG DREME-32 # Word RC Word Pos Neg P-value E-value # BEST BCACATG CATGTGV 1246 874 7.6e-017 3.2e-012 # TCACATG CATGTGA 460 281 1.8e-011 7.7e-007 # GCACATG CATGTGC 402 287 5.9e-006 2.5e-001 # CCACATG CATGTGG 428 338 5.9e-004 2.5e+001 letter-probability matrix: alength= 4 w= 7 nsites= 1301 E= 3.2e-012 0.000000 0.328209 0.307456 0.364335 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 MOTIF AAGGVCA DREME-33 # Word RC Word Pos Neg P-value E-value # BEST AAGGVCA TGBCCTT 1673 1258 1.4e-015 6.2e-011 # AAGGGCA TGCCCTT 682 467 7.5e-011 3.2e-006 # AAGGCCA TGGCCTT 519 404 7.5e-005 3.2e+000 # AAGGACA TGTCCTT 523 410 1.1e-004 4.5e+000 letter-probability matrix: alength= 4 w= 7 nsites= 1781 E= 6.2e-011 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.297586 0.295901 0.406513 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 MOTIF ATTAYAGG DREME-34 # Word RC Word Pos Neg P-value E-value # BEST ATTAYAGG CCTRTAAT 190 67 3.5e-015 1.5e-010 # ATTACAGG CCTGTAAT 124 42 6.4e-011 2.7e-006 # ATTATAGG CCTATAAT 66 25 1.0e-005 4.3e-001 letter-probability matrix: alength= 4 w= 8 nsites= 191 E= 1.5e-010 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.649215 0.000000 0.350785 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 MOTIF AGGCTGHA DREME-35 # Word RC Word Pos Neg P-value E-value # BEST AGGCTGHA TDCAGCCT 481 271 5.4e-015 2.3e-010 # AGGCTGAA TTCAGCCT 215 101 5.7e-011 2.5e-006 # AGGCTGCA TGCAGCCT 200 134 1.7e-004 7.4e+000 # AGGCTGTA TACAGCCT 72 36 3.4e-004 1.4e+001 letter-probability matrix: alength= 4 w= 8 nsites= 488 E= 2.3e-010 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.444672 0.409836 0.000000 0.145492 1.000000 0.000000 0.000000 0.000000 MOTIF AATAGGR DREME-36 # Word RC Word Pos Neg P-value E-value # BEST AATAGGR YCCTATT 504 292 1.7e-014 7.2e-010 # AATAGGG CCCTATT 299 163 1.0e-010 4.5e-006 # AATAGGA TCCTATT 206 130 1.9e-005 8.0e-001 letter-probability matrix: alength= 4 w= 7 nsites= 506 E= 7.2e-010 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.409091 0.000000 0.590909 0.000000 MOTIF CCGCGMCC DREME-37 # Word RC Word Pos Neg P-value E-value # BEST CCGCGMCC GGKCGCGG 242 104 3.4e-014 1.5e-009 # CCGCGCCC GGGCGCGG 172 76 4.6e-010 2.0e-005 # CCGCGACC GGTCGCGG 73 28 4.2e-006 1.8e-001 letter-probability matrix: alength= 4 w= 8 nsites= 246 E= 1.5e-009 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.296748 0.703252 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 MOTIF ACASACAC DREME-38 # Word RC Word Pos Neg P-value E-value # BEST ACASACAC GTGTSTGT 426 236 4.8e-014 2.1e-009 # ACACACAC GTGTGTGT 265 136 4.8e-011 2.1e-006 # ACAGACAC GTGTCTGT 176 107 2.3e-005 9.9e-001 letter-probability matrix: alength= 4 w= 8 nsites= 636 E= 2.1e-009 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.729560 0.270440 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 MOTIF TTCCGGR DREME-39 # Word RC Word Pos Neg P-value E-value # BEST TTCCGGR YCCGGAA 214 93 1.7e-012 7.2e-008 # TTCCGGG CCCGGAA 149 64 2.5e-009 1.1e-004 # TTCCGGA TCCGGAA 66 29 9.2e-005 3.9e+000 letter-probability matrix: alength= 4 w= 7 nsites= 218 E= 7.2e-008 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.316514 0.000000 0.683486 0.000000 MOTIF CRCCACCA DREME-40 # Word RC Word Pos Neg P-value E-value # BEST CRCCACCA TGGTGGYG 300 156 5.9e-012 2.5e-007 # CGCCACCA TGGTGGCG 100 33 2.4e-009 1.0e-004 # CACCACCA TGGTGGTG 203 123 5.2e-006 2.2e-001 letter-probability matrix: alength= 4 w= 8 nsites= 303 E= 2.5e-007 0.000000 1.000000 0.000000 0.000000 0.676568 0.000000 0.323432 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 MOTIF ATGGCGB DREME-41 # Word RC Word Pos Neg P-value E-value # BEST ATGGCGB VCGCCAT 393 228 1.4e-011 5.8e-007 # ATGGCGG CCGCCAT 156 82 8.8e-007 3.7e-002 # ATGGCGT ACGCCAT 103 59 3.3e-004 1.4e+001 # ATGGCGC GCGCCAT 138 88 5.2e-004 2.2e+001 letter-probability matrix: alength= 4 w= 7 nsites= 399 E= 5.8e-007 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.350877 0.390977 0.258145 MOTIF GTGGGAGK DREME-42 # Word RC Word Pos Neg P-value E-value # BEST GTGGGAGK MCTCCCAC 393 231 3.5e-011 1.5e-006 # GTGGGAGG CCTCCCAC 239 132 1.3e-008 5.7e-004 # GTGGGAGT ACTCCCAC 154 99 3.2e-004 1.4e+001 letter-probability matrix: alength= 4 w= 8 nsites= 396 E= 1.5e-006 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.608586 0.391414 MOTIF GAGGCCA DREME-43 # Word RC Word Pos Neg P-value E-value # BEST GAGGCCA TGGCCTC 691 473 5.4e-011 2.3e-006 # GAGGCCA TGGCCTC 691 473 5.4e-011 2.3e-006 letter-probability matrix: alength= 4 w= 7 nsites= 703 E= 2.3e-006 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 MOTIF GTGACTAA DREME-44 # Word RC Word Pos Neg P-value E-value # BEST GTGACTAA TTAGTCAC 107 34 2.6e-010 1.1e-005 # GTGACTAA TTAGTCAC 107 34 2.6e-010 1.1e-005 letter-probability matrix: alength= 4 w= 8 nsites= 108 E= 1.1e-005 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 MOTIF AGYAGCTG DREME-45 # Word RC Word Pos Neg P-value E-value # BEST AGYAGCTG CAGCTRCT 347 203 3.5e-010 1.5e-005 # AGTAGCTG CAGCTACT 152 64 9.0e-010 3.8e-005 # AGCAGCTG CAGCTGCT 195 139 1.2e-003 5.3e+001 letter-probability matrix: alength= 4 w= 8 nsites= 348 E= 1.5e-005 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.563218 0.000000 0.436782 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 MOTIF ATGAKATA DREME-46 # Word RC Word Pos Neg P-value E-value # BEST ATGAKATA TATMTCAT 116 40 4.2e-010 1.8e-005 # ATGAGATA TATCTCAT 80 23 7.1e-009 3.0e-004 # ATGATATA TATATCAT 36 17 6.3e-003 2.7e+002 letter-probability matrix: alength= 4 w= 8 nsites= 116 E= 1.8e-005 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.689655 0.310345 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 MOTIF GTCTSGAA DREME-47 # Word RC Word Pos Neg P-value E-value # BEST GTCTSGAA TTCSAGAC 238 122 4.3e-010 1.8e-005 # GTCTCGAA TTCGAGAC 84 28 5.4e-008 2.3e-003 # GTCTGGAA TTCCAGAC 155 94 6.4e-005 2.7e+000 letter-probability matrix: alength= 4 w= 8 nsites= 239 E= 1.8e-005 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.351464 0.648536 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 MOTIF ACWGTGAA DREME-48 # Word RC Word Pos Neg P-value E-value # BEST ACWGTGAA TTCACWGT 310 176 5.3e-010 2.3e-005 # ACAGTGAA TTCACTGT 180 87 5.9e-009 2.5e-004 # ACTGTGAA TTCACAGT 133 90 2.4e-003 1.0e+002 letter-probability matrix: alength= 4 w= 8 nsites= 311 E= 2.3e-005 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.575563 0.000000 0.000000 0.424437 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 MOTIF GTTTCY DREME-49 # Word RC Word Pos Neg P-value E-value # BEST GTTTCY RGAAAC 1935 1589 8.0e-010 3.4e-005 # GTTTCT AGAAAC 1487 1244 9.4e-007 4.0e-002 # GTTTCC GGAAAC 478 363 3.6e-005 1.5e+000 letter-probability matrix: alength= 4 w= 6 nsites= 2019 E= 3.4e-005 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.237741 0.000000 0.762259 MOTIF ARRCAGAA DREME-50 # Word RC Word Pos Neg P-value E-value # BEST ARRCAGAA TTCTGYYT 657 436 7.3e-012 3.1e-007 # AGACAGAA TTCTGTCT 173 104 1.9e-005 8.2e-001 # AGGCAGAA TTCTGCCT 211 141 1.1e-004 4.5e+000 # AAACAGAA TTCTGTTT 126 84 2.2e-003 9.5e+001 # AAGCAGAA TTCTGCTT 152 110 5.5e-003 2.3e+002 letter-probability matrix: alength= 4 w= 8 nsites= 676 E= 3.1e-007 1.000000 0.000000 0.000000 0.000000 0.430473 0.000000 0.569527 0.000000 0.443787 0.000000 0.556213 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 MOTIF TGWCATMA DREME-51 # Word RC Word Pos Neg P-value E-value # BEST TGWCATMA TKATGWCA 428 272 1.6e-009 6.7e-005 # TGACATCA TGATGTCA 155 85 3.5e-006 1.5e-001 # TGACATAA TTATGTCA 86 44 1.4e-004 6.0e+000 # TGTCATAA TTATGACA 79 49 5.0e-003 2.1e+002 # TGTCATCA TGATGACA 136 99 9.2e-003 3.9e+002 letter-probability matrix: alength= 4 w= 8 nsites= 439 E= 6.7e-005 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.542141 0.000000 0.000000 0.457859 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.364465 0.635535 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 MOTIF GCCACYGC DREME-52 # Word RC Word Pos Neg P-value E-value # BEST GCCACYGC GCRGTGGC 279 156 1.7e-009 7.1e-005 # GCCACTGC GCAGTGGC 179 100 1.2e-006 5.2e-002 # GCCACCGC GCGGTGGC 100 56 2.6e-004 1.1e+001 letter-probability matrix: alength= 4 w= 8 nsites= 281 E= 7.1e-005 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.362989 0.000000 0.637011 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 MOTIF AAASAAAA DREME-53 # Word RC Word Pos Neg P-value E-value # BEST AAASAAAA TTTTSTTT 416 264 2.4e-009 1.0e-004 # AAACAAAA TTTTGTTT 206 116 2.8e-007 1.2e-002 # AAAGAAAA TTTTCTTT 220 149 1.2e-004 5.2e+000 letter-probability matrix: alength= 4 w= 8 nsites= 447 E= 1.0e-004 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.494407 0.505593 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 MOTIF ARAGTTCA DREME-54 # Word RC Word Pos Neg P-value E-value # BEST ARAGTTCA TGAACTYT 319 188 2.7e-009 1.1e-004 # AAAGTTCA TGAACTTT 148 79 2.6e-006 1.1e-001 # AGAGTTCA TGAACTCT 172 109 9.8e-005 4.2e+000 letter-probability matrix: alength= 4 w= 8 nsites= 325 E= 1.1e-004 1.000000 0.000000 0.000000 0.000000 0.461538 0.000000 0.538462 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 MOTIF GCCTGGS DREME-55 # Word RC Word Pos Neg P-value E-value # BEST GCCTGGS SCCAGGC 1327 1055 6.1e-009 2.6e-004 # GCCTGGC GCCAGGC 697 508 2.0e-008 8.4e-004 # GCCTGGG CCCAGGC 664 571 4.0e-003 1.7e+002 letter-probability matrix: alength= 4 w= 7 nsites= 1378 E= 2.6e-004 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.508708 0.491292 0.000000 MOTIF CGACCTC DREME-56 # Word RC Word Pos Neg P-value E-value # BEST CGACCTC GAGGTCG 271 155 9.0e-009 3.8e-004 # CGACCTC GAGGTCG 271 155 9.0e-009 3.8e-004 letter-probability matrix: alength= 4 w= 7 nsites= 277 E= 3.8e-004 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 MOTIF KAGATTA DREME-57 # Word RC Word Pos Neg P-value E-value # BEST KAGATTA TAATCTM 410 267 1.7e-008 7.4e-004 # GAGATTA TAATCTC 254 149 8.5e-008 3.6e-003 # TAGATTA TAATCTA 160 119 8.1e-003 3.4e+002 letter-probability matrix: alength= 4 w= 7 nsites= 416 E= 7.4e-004 0.000000 0.000000 0.612981 0.387019 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 MOTIF CGATAAR DREME-58 # Word RC Word Pos Neg P-value E-value # BEST CGATAAR YTTATCG 134 58 2.0e-008 8.4e-004 # CGATAAG CTTATCG 85 38 1.3e-005 5.6e-001 # CGATAAA TTTATCG 50 21 3.8e-004 1.6e+001 letter-probability matrix: alength= 4 w= 7 nsites= 135 E= 8.4e-004 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.370370 0.000000 0.629630 0.000000 MOTIF ATCTKTAA DREME-59 # Word RC Word Pos Neg P-value E-value # BEST ATCTKTAA TTAMAGAT 182 92 2.7e-008 1.1e-003 # ATCTGTAA TTACAGAT 79 35 2.3e-005 9.6e-001 # ATCTTTAA TTAAAGAT 103 57 1.7e-004 7.1e+000 letter-probability matrix: alength= 4 w= 8 nsites= 182 E= 1.1e-003 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.434066 0.565934 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 MOTIF ARCCACA DREME-60 # Word RC Word Pos Neg P-value E-value # BEST ARCCACA TGTGGYT 806 606 3.7e-008 1.6e-003 # AACCACA TGTGGTT 406 294 1.1e-005 4.9e-001 # AGCCACA TGTGGCT 404 317 6.2e-004 2.6e+001 letter-probability matrix: alength= 4 w= 7 nsites= 820 E= 1.6e-003 1.000000 0.000000 0.000000 0.000000 0.501220 0.000000 0.498780 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 MOTIF CATAWCCG DREME-61 # Word RC Word Pos Neg P-value E-value # BEST CATAWCCG CGGWTATG 55 12 5.0e-008 2.1e-003 # CATAACCG CGGTTATG 40 8 1.6e-006 6.9e-002 # CATATCCG CGGATATG 15 4 9.6e-003 4.1e+002 letter-probability matrix: alength= 4 w= 8 nsites= 55 E= 2.1e-003 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 0.727273 0.000000 0.000000 0.272727 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 MOTIF TATRGAAA DREME-62 # Word RC Word Pos Neg P-value E-value # BEST TATRGAAA TTTCYATA 137 63 8.5e-008 3.6e-003 # TATGGAAA TTTCCATA 88 40 1.3e-005 5.5e-001 # TATAGAAA TTTCTATA 49 23 1.5e-003 6.2e+001 letter-probability matrix: alength= 4 w= 8 nsites= 137 E= 3.6e-003 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.357664 0.000000 0.642336 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 MOTIF TAGASATA DREME-63 # Word RC Word Pos Neg P-value E-value # BEST TAGASATA TATSTCTA 113 47 9.0e-008 3.8e-003 # TAGACATA TATGTCTA 72 25 9.4e-007 4.0e-002 # TAGAGATA TATCTCTA 42 22 8.4e-003 3.6e+002 letter-probability matrix: alength= 4 w= 8 nsites= 115 E= 3.8e-003 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.626087 0.373913 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 MOTIF GGGAGGGR DREME-64 # Word RC Word Pos Neg P-value E-value # BEST GGGAGGGR YCCCTCCC 629 460 1.3e-007 5.3e-003 # GGGAGGGG CCCCTCCC 384 284 5.6e-005 2.4e+000 # GGGAGGGA TCCCTCCC 254 185 5.5e-004 2.3e+001 letter-probability matrix: alength= 4 w= 8 nsites= 640 E= 5.3e-003 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.398438 0.000000 0.601562 0.000000 MOTIF CCCRGGAA DREME-65 # Word RC Word Pos Neg P-value E-value # BEST CCCRGGAA TTCCYGGG 167 84 8.3e-008 3.5e-003 # CCCAGGAA TTCCTGGG 129 65 2.4e-006 1.0e-001 # CCCGGGAA TTCCCGGG 38 19 8.1e-003 3.4e+002 letter-probability matrix: alength= 4 w= 8 nsites= 168 E= 3.5e-003 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.767857 0.000000 0.232143 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 MOTIF TCCCAGAR DREME-66 # Word RC Word Pos Neg P-value E-value # BEST TCCCAGAR YTCTGGGA 320 202 1.2e-007 5.0e-003 # TCCCAGAA TTCTGGGA 154 89 1.7e-005 7.4e-001 # TCCCAGAG CTCTGGGA 167 113 7.2e-004 3.1e+001 letter-probability matrix: alength= 4 w= 8 nsites= 322 E= 5.0e-003 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.481366 0.000000 0.518634 0.000000 MOTIF CTCCHGCC DREME-67 # Word RC Word Pos Neg P-value E-value # BEST CTCCHGCC GGCDGGAG 613 448 1.7e-007 7.2e-003 # CTCCTGCC GGCAGGAG 263 192 4.8e-004 2.0e+001 # CTCCCGCC GGCGGGAG 117 74 1.1e-003 4.8e+001 # CTCCAGCC GGCTGGAG 238 187 7.4e-003 3.1e+002 letter-probability matrix: alength= 4 w= 8 nsites= 623 E= 7.2e-003 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.385233 0.187801 0.000000 0.426966 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 MOTIF GCATGCGY DREME-68 # Word RC Word Pos Neg P-value E-value # BEST GCATGCGY RCGCATGC 103 42 2.1e-007 8.7e-003 # GCATGCGC GCGCATGC 78 27 3.2e-007 1.3e-002 # GCATGCGT ACGCATGC 35 16 5.5e-003 2.3e+002 letter-probability matrix: alength= 4 w= 8 nsites= 105 E= 8.7e-003 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.704762 0.000000 0.295238 MOTIF ACTCCATC DREME-69 # Word RC Word Pos Neg P-value E-value # BEST ACTCCATC GATGGAGT 135 64 2.5e-007 1.1e-002 # ACTCCATC GATGGAGT 135 64 2.5e-007 1.1e-002 letter-probability matrix: alength= 4 w= 8 nsites= 141 E= 1.1e-002 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 MOTIF AGGCATTC DREME-70 # Word RC Word Pos Neg P-value E-value # BEST AGGCATTC GAATGCCT 135 64 2.5e-007 1.1e-002 # AGGCATTC GAATGCCT 135 64 2.5e-007 1.1e-002 letter-probability matrix: alength= 4 w= 8 nsites= 135 E= 1.1e-002 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 MOTIF CAGCDGC DREME-71 # Word RC Word Pos Neg P-value E-value # BEST CAGCDGC GCHGCTG 1150 928 3.6e-007 1.5e-002 # CAGCAGC GCTGCTG 546 440 3.6e-004 1.5e+001 # CAGCTGC GCAGCTG 377 303 2.4e-003 1.0e+002 # CAGCGGC GCCGCTG 258 204 6.6e-003 2.8e+002 letter-probability matrix: alength= 4 w= 7 nsites= 1190 E= 1.5e-002 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.464706 0.000000 0.216807 0.318487 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 MOTIF ACGTGRC DREME-72 # Word RC Word Pos Neg P-value E-value # BEST ACGTGRC GYCACGT 183 100 4.3e-007 1.8e-002 # ACGTGAC GTCACGT 71 32 7.5e-005 3.2e+000 # ACGTGGC GCCACGT 112 68 6.3e-004 2.7e+001 letter-probability matrix: alength= 4 w= 7 nsites= 184 E= 1.8e-002 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.385870 0.000000 0.614130 0.000000 0.000000 1.000000 0.000000 0.000000 MOTIF ACAGTAAC DREME-73 # Word RC Word Pos Neg P-value E-value # BEST ACAGTAAC GTTACTGT 78 28 6.1e-007 2.6e-002 # ACAGTAAC GTTACTGT 78 28 6.1e-007 2.6e-002 letter-probability matrix: alength= 4 w= 8 nsites= 79 E= 2.6e-002 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 MOTIF TTTAMAAA DREME-74 # Word RC Word Pos Neg P-value E-value # BEST TTTAMAAA TTTKTAAA 237 143 7.5e-007 3.2e-002 # TTTACAAA TTTGTAAA 94 51 2.2e-004 9.3e+000 # TTTAAAAA TTTTTAAA 145 92 3.4e-004 1.4e+001 letter-probability matrix: alength= 4 w= 8 nsites= 240 E= 3.2e-002 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 0.608333 0.391667 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 # Stopping reason: E-value threshold exceeded # Running time: 7918.76 seconds