# DREME 4.12.0 # command: dreme -v 1 -oc /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeK562eGFPComparisons/FOSL1.IDR0.05.filt.narrowPeak.summitPlusMinus250bp.MemeChipResultsDefaultMax/dreme_out -png -dna -p /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeK562eGFPComparisons/FOSL1.IDR0.05.filt.narrowPeak.summitPlusMinus250bp.MemeChipResultsDefaultMax/seqs-centered -n /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeK562eGFPComparisons/FOSL1.IDR0.05.filt.narrowPeak.summitPlusMinus250bp.MemeChipResultsDefaultMax/seqs-shuffled # positives: 59781 from /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeK562eGFPComparisons/FOSL1.IDR0.05.filt.narrowPeak.summitPlusMinus250bp.MemeChipResultsDefaultMax/seqs-centered (Wed Nov 22 12:43:31 PST 2017) # negatives: 59781 from /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeK562eGFPComparisons/FOSL1.IDR0.05.filt.narrowPeak.summitPlusMinus250bp.MemeChipResultsDefaultMax/seqs-shuffled (Wed Nov 22 12:43:32 PST 2017) # host: kali # when: Wed Nov 22 13:05:47 PST 2017 MEME version 4.12.0 ALPHABET "DNA" DNA-LIKE A "Adenine" CC0000 ~ T "Thymine" 008000 C "Cytosine" 0000CC ~ G "Guanine" FFB300 N "Any base" = ACGT X = ACGT . = ACGT V "Not T" = ACG H "Not G" = ACT D "Not C" = AGT B "Not A" = CGT M "Amino" = AC R "Purine" = AG W "Weak" = AT S "Strong" = CG Y "Pyrimidine" = CT K "Keto" = GT U = T END ALPHABET strands: + - Background letter frequencies (from dataset): A 0.260 C 0.240 G 0.241 T 0.260 MOTIF TKAGTCAB DREME-1 # Word RC Word Pos Neg P-value E-value # BEST TKAGTCAB VTGACTMA 21341 1570 2.4e-5298 1.1e-5293 # TGAGTCAT ATGACTCA 8247 343 7.6e-2085 3.5e-2080 # TGAGTCAC GTGACTCA 7175 271 1.1e-1830 5.2e-1826 # TGAGTCAG CTGACTCA 4273 383 9.1e-858 4.2e-853 # TTAGTCAT ATGACTAA 1459 221 1.1e-226 4.9e-222 # TTAGTCAC GTGACTAA 1000 160 1.7e-150 7.8e-146 # TTAGTCAG CTGACTAA 394 204 2.8e-015 1.3e-010 letter-probability matrix: alength= 4 w= 8 nsites= 23162 E= 1.1e-5293 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.873759 0.126241 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.362102 0.209740 0.428158 MOTIF BTTATCW DREME-2 # Word RC Word Pos Neg P-value E-value # BEST BTTATCW WGATAAV 10398 4142 1.2e-687 5.7e-683 # CTTATCT AGATAAG 3226 787 5.6e-359 2.5e-354 # TTTATCT AGATAAA 2365 897 4.3e-155 2.0e-150 # CTTATCA TGATAAG 1815 708 1.1e-113 5.0e-109 # GTTATCT AGATAAC 1448 497 2.5e-109 1.1e-104 # TTTATCA TGATAAA 1590 893 4.1e-046 1.9e-041 # GTTATCA TGATAAC 935 526 1.5e-027 7.0e-023 letter-probability matrix: alength= 4 w= 7 nsites= 11630 E= 5.7e-683 0.000000 0.443594 0.207997 0.348409 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.379450 0.000000 0.000000 0.620550 MOTIF RTGAKTCA DREME-3 # Word RC Word Pos Neg P-value E-value # BEST RTGAKTCA TGAMTCAY 3065 738 1.1e-344 5.0e-340 # ATGATTCA TGAATCAT 1533 332 5.9e-187 2.7e-182 # GTGATTCA TGAATCAC 871 239 7.0e-086 3.2e-081 # ATGAGTCA TGACTCAT 413 89 2.2e-051 9.8e-047 # GTGAGTCA TGACTCAC 295 81 4.5e-030 2.0e-025 letter-probability matrix: alength= 4 w= 8 nsites= 3165 E= 5.0e-340 0.625276 0.000000 0.374724 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.226224 0.773776 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 MOTIF CYTCCY DREME-4 # Word RC Word Pos Neg P-value E-value # BEST CYTCCY RGGARG 23272 17156 5.0e-307 2.3e-302 # CCTCCC GGGAGG 9077 5501 2.1e-221 9.7e-217 # CTTCCT AGGAAG 7614 5011 1.5e-133 6.8e-129 # CTTCCC GGGAAG 5999 4382 2.2e-062 9.8e-058 # CCTCCT AGGAGG 6703 5512 2.9e-030 1.3e-025 letter-probability matrix: alength= 4 w= 6 nsites= 30698 E= 2.3e-302 0.000000 1.000000 0.000000 0.000000 0.000000 0.543521 0.000000 0.456479 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.521826 0.000000 0.478174 MOTIF CTGTAATC DREME-5 # Word RC Word Pos Neg P-value E-value # BEST CTGTAATC GATTACAG 1500 131 1.5e-298 6.9e-294 # CTGTAATC GATTACAG 1500 131 1.5e-298 6.9e-294 letter-probability matrix: alength= 4 w= 8 nsites= 1510 E= 6.9e-294 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 MOTIF DAAATR DREME-6 # Word RC Word Pos Neg P-value E-value # BEST DAAATR YATTTH 20624 15774 9.9e-205 4.5e-200 # AAAATA TATTTT 5897 3702 7.3e-122 3.3e-117 # GAAATG CATTTC 4800 3366 3.1e-061 1.4e-056 # TAAATA TATTTA 3279 2204 1.8e-050 8.1e-046 # AAAATG CATTTT 5867 4580 5.3e-040 2.4e-035 # GAAATA TATTTC 3382 2479 5.0e-034 2.3e-029 # TAAATG CATTTA 3097 2663 2.5e-009 1.1e-004 letter-probability matrix: alength= 4 w= 6 nsites= 27514 E= 4.5e-200 0.457331 0.000000 0.307516 0.235153 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.476994 0.000000 0.523006 0.000000 MOTIF CCMGSC DREME-7 # Word RC Word Pos Neg P-value E-value # BEST CCMGSC GSCKGG 15316 11223 3.1e-179 1.4e-174 # CCAGGC GCCTGG 6661 4478 2.0e-105 9.1e-101 # CCAGCC GGCTGG 6697 4543 7.4e-102 3.3e-097 # CCCGCC GGCGGG 3412 2436 1.6e-039 7.1e-035 # CCCGGC GCCGGG 2878 2198 8.9e-023 4.0e-018 letter-probability matrix: alength= 4 w= 6 nsites= 20093 E= 1.4e-174 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.651919 0.348081 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.521624 0.478376 0.000000 0.000000 1.000000 0.000000 0.000000 MOTIF AAAGTGCT DREME-8 # Word RC Word Pos Neg P-value E-value # BEST AAAGTGCT AGCACTTT 1196 281 3.2e-136 1.4e-131 # AAAGTGCT AGCACTTT 1196 281 3.2e-136 1.4e-131 letter-probability matrix: alength= 4 w= 8 nsites= 1199 E= 1.4e-131 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 MOTIF AAAAVAAA DREME-9 # Word RC Word Pos Neg P-value E-value # BEST AAAAVAAA TTTBTTTT 3632 1903 2.6e-127 1.1e-122 # AAAAAAAA TTTTTTTT 1888 805 9.6e-102 4.2e-097 # AAAACAAA TTTGTTTT 1064 593 6.0e-032 2.6e-027 # AAAAGAAA TTTCTTTT 1054 638 8.8e-025 3.9e-020 letter-probability matrix: alength= 4 w= 8 nsites= 4377 E= 1.1e-122 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.510852 0.250628 0.238520 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 MOTIF TTACTCAB DREME-10 # Word RC Word Pos Neg P-value E-value # BEST TTACTCAB VTGAGTAA 1522 504 1.9e-120 8.3e-116 # TTACTCAT ATGAGTAA 721 177 2.3e-079 1.0e-074 # TTACTCAC GTGAGTAA 445 166 8.0e-031 3.5e-026 # TTACTCAG CTGAGTAA 371 162 2.9e-020 1.3e-015 letter-probability matrix: alength= 4 w= 8 nsites= 1552 E= 8.3e-116 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.288015 0.240335 0.471649 MOTIF TGACSTCA DREME-11 # Word RC Word Pos Neg P-value E-value # BEST TGACSTCA TGASGTCA 1139 310 6.0e-113 2.6e-108 # TGACCTCA TGAGGTCA 843 280 7.5e-067 3.3e-062 # TGACGTCA TGACGTCA 298 30 4.3e-057 1.9e-052 letter-probability matrix: alength= 4 w= 8 nsites= 1157 E= 2.6e-108 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.733794 0.266206 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 MOTIF GGAAA DREME-12 # Word RC Word Pos Neg P-value E-value # BEST GGAAA TTTCC 13624 10559 2.3e-108 9.9e-104 # GGAAA TTTCC 13624 10559 2.3e-108 9.9e-104 letter-probability matrix: alength= 4 w= 5 nsites= 15538 E= 9.9e-104 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 MOTIF WAACCACR DREME-13 # Word RC Word Pos Neg P-value E-value # BEST WAACCACR YGTGGTTW 1225 388 1.4e-102 6.3e-098 # AAACCACA TGTGGTTT 777 217 2.3e-075 1.0e-070 # TAACCACA TGTGGTTA 324 115 1.7e-024 7.5e-020 # TAACCACG CGTGGTTA 54 16 2.9e-006 1.3e-001 # AAACCACG CGTGGTTT 83 40 6.5e-005 2.9e+000 letter-probability matrix: alength= 4 w= 8 nsites= 1252 E= 6.3e-098 0.695687 0.000000 0.000000 0.304313 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.890575 0.000000 0.109425 0.000000 MOTIF ACGTG DREME-14 # Word RC Word Pos Neg P-value E-value # BEST ACGTG CACGT 3716 2174 1.5e-095 6.5e-091 # ACGTG CACGT 3716 2174 1.5e-095 6.5e-091 letter-probability matrix: alength= 4 w= 5 nsites= 3928 E= 6.5e-091 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 MOTIF GCCRCYGC DREME-15 # Word RC Word Pos Neg P-value E-value # BEST GCCRCYGC GCRGYGGC 1598 716 1.5e-078 6.7e-074 # GCCACTGC GCAGTGGC 621 231 1.5e-042 6.3e-038 # GCCGCCGC GCGGCGGC 523 250 1.7e-023 7.4e-019 # GCCACCGC GCGGTGGC 283 96 7.0e-023 3.0e-018 # GCCGCTGC GCAGCGGC 263 157 1.2e-007 5.4e-003 letter-probability matrix: alength= 4 w= 8 nsites= 1733 E= 6.7e-074 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.521062 0.000000 0.478938 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.494518 0.000000 0.505482 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 MOTIF RTGACRCA DREME-16 # Word RC Word Pos Neg P-value E-value # BEST RTGACRCA TGYGTCAY 1441 637 9.8e-073 4.2e-068 # ATGACACA TGTGTCAT 677 298 3.8e-035 1.6e-030 # ATGACGCA TGCGTCAT 181 38 7.5e-024 3.2e-019 # GTGACGCA TGCGTCAC 166 51 1.0e-015 4.3e-011 # GTGACACA TGTGTCAC 430 252 4.1e-012 1.8e-007 letter-probability matrix: alength= 4 w= 8 nsites= 1476 E= 4.2e-068 0.588076 0.000000 0.411924 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.761518 0.000000 0.238482 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 MOTIF CCMCACCC DREME-17 # Word RC Word Pos Neg P-value E-value # BEST CCMCACCC GGGTGKGG 1341 593 1.1e-067 4.5e-063 # CCCCACCC GGGTGGGG 906 334 3.0e-062 1.3e-057 # CCACACCC GGGTGTGG 448 264 2.3e-012 1.0e-007 letter-probability matrix: alength= 4 w= 8 nsites= 1368 E= 4.5e-063 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.328216 0.671784 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 MOTIF AGTAGCTG DREME-18 # Word RC Word Pos Neg P-value E-value # BEST AGTAGCTG CAGCTACT 655 188 6.2e-062 2.7e-057 # AGTAGCTG CAGCTACT 655 188 6.2e-062 2.7e-057 letter-probability matrix: alength= 4 w= 8 nsites= 656 E= 2.7e-057 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 MOTIF MGATAA DREME-19 # Word RC Word Pos Neg P-value E-value # BEST MGATAA TTATCK 1942 1079 7.2e-058 3.1e-053 # AGATAA TTATCT 1409 705 5.7e-055 2.4e-050 # CGATAA TTATCG 545 382 4.3e-008 1.8e-003 letter-probability matrix: alength= 4 w= 6 nsites= 1997 E= 3.1e-053 0.724086 0.275914 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 MOTIF AGGCDG DREME-20 # Word RC Word Pos Neg P-value E-value # BEST AGGCDG CHGCCT 9305 7578 5.7e-047 2.5e-042 # AGGCTG CAGCCT 3762 2909 3.0e-027 1.3e-022 # AGGCAG CTGCCT 5083 4236 3.4e-020 1.4e-015 # AGGCGG CCGCCT 1085 848 3.0e-008 1.3e-003 letter-probability matrix: alength= 4 w= 6 nsites= 10221 E= 2.5e-042 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.514333 0.000000 0.108111 0.377556 0.000000 0.000000 1.000000 0.000000 MOTIF TAYAGGCR DREME-21 # Word RC Word Pos Neg P-value E-value # BEST TAYAGGCR YGCCTRTA 617 213 6.5e-047 2.8e-042 # TACAGGCG CGCCTGTA 150 22 6.1e-025 2.6e-020 # TACAGGCA TGCCTGTA 269 106 8.2e-018 3.5e-013 # TATAGGCA TGCCTATA 150 66 5.2e-009 2.2e-004 # TATAGGCG CGCCTATA 50 19 1.2e-004 5.2e+000 letter-probability matrix: alength= 4 w= 8 nsites= 622 E= 2.8e-042 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.678457 0.000000 0.321543 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.678457 0.000000 0.321543 0.000000 MOTIF ACACACRC DREME-22 # Word RC Word Pos Neg P-value E-value # BEST ACACACRC GYGTGTGT 855 383 1.4e-042 6.1e-038 # ACACACAC GTGTGTGT 760 342 1.1e-037 4.7e-033 # ACACACGC GCGTGTGT 157 55 7.0e-013 3.0e-008 letter-probability matrix: alength= 4 w= 8 nsites= 1395 E= 6.1e-038 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.903226 0.000000 0.096774 0.000000 0.000000 1.000000 0.000000 0.000000 MOTIF MGTCAY DREME-23 # Word RC Word Pos Neg P-value E-value # BEST MGTCAY RTGACK 7746 6288 1.6e-039 6.9e-035 # AGTCAC GTGACT 3222 2576 1.8e-018 7.6e-014 # AGTCAT ATGACT 3388 2811 2.8e-014 1.2e-009 # CGTCAC GTGACG 856 634 3.9e-009 1.7e-004 # CGTCAT ATGACG 615 484 4.0e-005 1.7e+000 letter-probability matrix: alength= 4 w= 6 nsites= 8335 E= 6.9e-035 0.820156 0.179844 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.504139 0.000000 0.495861 MOTIF CAGTGAGC DREME-24 # Word RC Word Pos Neg P-value E-value # BEST CAGTGAGC GCTCACTG 674 285 1.4e-037 5.8e-033 # CAGTGAGC GCTCACTG 674 285 1.4e-037 5.8e-033 letter-probability matrix: alength= 4 w= 8 nsites= 676 E= 5.8e-033 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 MOTIF RWAAACA DREME-25 # Word RC Word Pos Neg P-value E-value # BEST RWAAACA TGTTTWY 4102 3067 8.6e-037 3.6e-032 # GTAAACA TGTTTAC 956 555 1.0e-025 4.4e-021 # ATAAACA TGTTTAT 807 558 6.5e-012 2.7e-007 # GAAAACA TGTTTTC 1025 743 7.6e-012 3.2e-007 # AAAAACA TGTTTTT 1430 1305 8.2e-003 3.5e+002 letter-probability matrix: alength= 4 w= 7 nsites= 4263 E= 3.6e-032 0.530847 0.000000 0.469153 0.000000 0.584330 0.000000 0.000000 0.415670 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 MOTIF GAGACRGR DREME-26 # Word RC Word Pos Neg P-value E-value # BEST GAGACRGR YCYGTCTC 1447 849 5.5e-037 2.3e-032 # GAGACGGA TCCGTCTC 179 64 4.2e-014 1.8e-009 # GAGACAGA TCTGTCTC 603 384 1.3e-012 5.6e-008 # GAGACGGG CCCGTCTC 202 91 3.7e-011 1.6e-006 # GAGACAGG CCTGTCTC 479 313 1.8e-009 7.5e-005 letter-probability matrix: alength= 4 w= 8 nsites= 1473 E= 2.3e-032 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.740665 0.000000 0.259335 0.000000 0.000000 0.000000 1.000000 0.000000 0.536999 0.000000 0.463001 0.000000 MOTIF RRCCACA DREME-27 # Word RC Word Pos Neg P-value E-value # BEST RRCCACA TGTGGYY 3833 2875 1.0e-033 4.3e-029 # AGCCACA TGTGGCT 1300 919 1.6e-016 6.9e-012 # GGCCACA TGTGGCC 1033 746 3.8e-012 1.6e-007 # GACCACA TGTGGTC 1019 772 2.2e-009 9.4e-005 # AACCACA TGTGGTT 600 492 5.7e-004 2.4e+001 letter-probability matrix: alength= 4 w= 7 nsites= 3995 E= 4.3e-029 0.480350 0.000000 0.519650 0.000000 0.408260 0.000000 0.591740 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 MOTIF CKTGARCC DREME-28 # Word RC Word Pos Neg P-value E-value # BEST CKTGARCC GGYTCAMG 984 522 9.8e-034 4.1e-029 # CTTGAGCC GGCTCAAG 446 232 6.6e-017 2.8e-012 # CTTGAACC GGTTCAAG 384 200 9.7e-015 4.1e-010 # CGTGAGCC GGCTCACG 107 62 3.3e-004 1.4e+001 # CGTGAACC GGTTCACG 55 30 4.4e-003 1.9e+002 letter-probability matrix: alength= 4 w= 8 nsites= 996 E= 4.1e-029 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.162651 0.837349 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.441767 0.000000 0.558233 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 MOTIF SAGAWA DREME-29 # Word RC Word Pos Neg P-value E-value # BEST SAGAWA TWTCTS 11876 10344 2.4e-030 1.0e-025 # CAGAAA TTTCTG 4563 3930 5.5e-013 2.3e-008 # GAGAAA TTTCTC 4420 3841 2.1e-011 9.0e-007 # GAGATA TATCTC 1928 1584 2.1e-009 8.7e-005 # CAGATA TATCTG 1998 1737 7.7e-006 3.2e-001 letter-probability matrix: alength= 4 w= 6 nsites= 13368 E= 1.0e-025 0.000000 0.506807 0.493193 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.700030 0.000000 0.000000 0.299970 1.000000 0.000000 0.000000 0.000000 MOTIF KTTTTAAA DREME-30 # Word RC Word Pos Neg P-value E-value # BEST KTTTTAAA TTTAAAAM 789 411 1.4e-028 5.8e-024 # TTTTTAAA TTTAAAAA 541 267 1.1e-022 4.7e-018 # GTTTTAAA TTTAAAAC 295 161 1.6e-010 6.9e-006 letter-probability matrix: alength= 4 w= 8 nsites= 805 E= 5.8e-024 0.000000 0.000000 0.347826 0.652174 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 MOTIF CMCAGC DREME-31 # Word RC Word Pos Neg P-value E-value # BEST CMCAGC GCTGKG 7182 6053 1.2e-025 5.0e-021 # CCCAGC GCTGGG 3710 3069 5.8e-016 2.4e-011 # CACAGC GCTGTG 3756 3190 1.4e-012 5.8e-008 letter-probability matrix: alength= 4 w= 6 nsites= 7713 E= 5.0e-021 0.000000 1.000000 0.000000 0.000000 0.503176 0.496824 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 MOTIF CCGGAAGY DREME-32 # Word RC Word Pos Neg P-value E-value # BEST CCGGAAGY RCTTCCGG 362 139 2.4e-024 1.0e-019 # CCGGAAGT ACTTCCGG 192 58 2.8e-018 1.2e-013 # CCGGAAGC GCTTCCGG 178 82 1.2e-009 5.1e-005 letter-probability matrix: alength= 4 w= 8 nsites= 382 E= 1.0e-019 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.473822 0.000000 0.526178 MOTIF CAAMCTCC DREME-33 # Word RC Word Pos Neg P-value E-value # BEST CAAMCTCC GGAGKTTG 570 293 9.4e-022 3.9e-017 # CAACCTCC GGAGGTTG 209 83 5.0e-014 2.1e-009 # CAAACTCC GGAGTTTG 362 210 9.7e-011 4.1e-006 letter-probability matrix: alength= 4 w= 8 nsites= 571 E= 3.9e-017 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.633975 0.366025 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 MOTIF CTGAKTCA DREME-34 # Word RC Word Pos Neg P-value E-value # BEST CTGAKTCA TGAMTCAG 694 389 4.8e-021 2.0e-016 # CTGAGTCA TGACTCAG 217 89 8.0e-014 3.3e-009 # CTGATTCA TGAATCAG 478 300 8.1e-011 3.4e-006 letter-probability matrix: alength= 4 w= 8 nsites= 704 E= 2.0e-016 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.308239 0.691761 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 MOTIF GYGACAGA DREME-35 # Word RC Word Pos Neg P-value E-value # BEST GYGACAGA TCTGTCRC 584 311 1.8e-020 7.6e-016 # GTGACAGA TCTGTCAC 461 249 6.2e-016 2.6e-011 # GCGACAGA TCTGTCGC 123 63 6.4e-006 2.6e-001 letter-probability matrix: alength= 4 w= 8 nsites= 585 E= 7.6e-016 0.000000 0.000000 1.000000 0.000000 0.000000 0.210256 0.000000 0.789744 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 MOTIF ATTTCATC DREME-36 # Word RC Word Pos Neg P-value E-value # BEST ATTTCATC GATGAAAT 304 120 7.2e-020 3.0e-015 # ATTTCATC GATGAAAT 304 120 7.2e-020 3.0e-015 letter-probability matrix: alength= 4 w= 8 nsites= 305 E= 3.0e-015 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 MOTIF AAAAATTA DREME-37 # Word RC Word Pos Neg P-value E-value # BEST AAAAATTA TAATTTTT 539 298 2.6e-017 1.1e-012 # AAAAATTA TAATTTTT 539 298 2.6e-017 1.1e-012 letter-probability matrix: alength= 4 w= 8 nsites= 542 E= 1.1e-012 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 MOTIF GTGACCTY DREME-38 # Word RC Word Pos Neg P-value E-value # BEST GTGACCTY RAGGTCAC 495 267 4.7e-017 2.0e-012 # GTGACCTT AAGGTCAC 339 176 2.7e-013 1.1e-008 # GTGACCTC GAGGTCAC 157 91 1.6e-005 6.8e-001 letter-probability matrix: alength= 4 w= 8 nsites= 497 E= 2.0e-012 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.315895 0.000000 0.684105 MOTIF AGATGGVG DREME-39 # Word RC Word Pos Neg P-value E-value # BEST AGATGGVG CBCCATCT 896 588 4.2e-016 1.8e-011 # AGATGGCG CGCCATCT 137 53 4.5e-010 1.9e-005 # AGATGGAG CTCCATCT 427 295 4.7e-007 2.0e-002 # AGATGGGG CCCCATCT 338 242 3.7e-005 1.5e+000 letter-probability matrix: alength= 4 w= 8 nsites= 908 E= 1.8e-011 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.472467 0.151982 0.375551 0.000000 0.000000 0.000000 1.000000 0.000000 MOTIF CCACCWCG DREME-40 # Word RC Word Pos Neg P-value E-value # BEST CCACCWCG CGWGGTGG 301 135 5.5e-016 2.3e-011 # CCACCACG CGTGGTGG 134 49 1.2e-010 5.1e-006 # CCACCTCG CGAGGTGG 167 86 1.9e-007 8.0e-003 letter-probability matrix: alength= 4 w= 8 nsites= 301 E= 2.3e-011 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.445183 0.000000 0.000000 0.554817 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 MOTIF CCRGGAA DREME-41 # Word RC Word Pos Neg P-value E-value # BEST CCRGGAA TTCCYGG 847 556 2.7e-015 1.1e-010 # CCAGGAA TTCCTGG 721 478 9.1e-013 3.8e-008 # CCGGGAA TTCCCGG 128 80 5.3e-004 2.2e+001 letter-probability matrix: alength= 4 w= 7 nsites= 851 E= 1.1e-010 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.849589 0.000000 0.150411 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 MOTIF GGGATTAY DREME-42 # Word RC Word Pos Neg P-value E-value # BEST GGGATTAY RTAATCCC 291 133 5.5e-015 2.3e-010 # GGGATTAC GTAATCCC 161 62 1.2e-011 5.0e-007 # GGGATTAT ATAATCCC 132 71 1.1e-005 4.6e-001 letter-probability matrix: alength= 4 w= 8 nsites= 293 E= 2.3e-010 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.549488 0.000000 0.450512 MOTIF CACTGCAC DREME-43 # Word RC Word Pos Neg P-value E-value # BEST CACTGCAC GTGCAGTG 412 223 2.4e-014 1.0e-009 # CACTGCAC GTGCAGTG 412 223 2.4e-014 1.0e-009 letter-probability matrix: alength= 4 w= 8 nsites= 413 E= 1.0e-009 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 MOTIF CGATTCTC DREME-44 # Word RC Word Pos Neg P-value E-value # BEST CGATTCTC GAGAATCG 148 46 5.2e-014 2.2e-009 # CGATTCTC GAGAATCG 148 46 5.2e-014 2.2e-009 letter-probability matrix: alength= 4 w= 8 nsites= 148 E= 2.2e-009 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 MOTIF AGTTCGAG DREME-45 # Word RC Word Pos Neg P-value E-value # BEST AGTTCGAG CTCGAACT 142 45 3.2e-013 1.3e-008 # AGTTCGAG CTCGAACT 142 45 3.2e-013 1.3e-008 letter-probability matrix: alength= 4 w= 8 nsites= 142 E= 1.3e-008 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 MOTIF CAGCHGC DREME-46 # Word RC Word Pos Neg P-value E-value # BEST CAGCHGC GCDGCTG 2515 2046 7.7e-013 3.2e-008 # CAGCTGC GCAGCTG 1081 866 4.9e-007 2.1e-002 # CAGCAGC GCTGCTG 1257 1036 1.7e-006 7.2e-002 # CAGCCGC GCGGCTG 368 276 1.6e-004 6.6e+000 letter-probability matrix: alength= 4 w= 7 nsites= 2615 E= 3.2e-008 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.466922 0.138050 0.000000 0.395029 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 MOTIF TGACATCA DREME-47 # Word RC Word Pos Neg P-value E-value # BEST TGACATCA TGATGTCA 515 317 2.9e-012 1.2e-007 # TGACATCA TGATGTCA 515 317 2.9e-012 1.2e-007 letter-probability matrix: alength= 4 w= 8 nsites= 527 E= 1.2e-007 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 MOTIF CAACATGG DREME-48 # Word RC Word Pos Neg P-value E-value # BEST CAACATGG CCATGTTG 372 211 1.2e-011 4.8e-007 # CAACATGG CCATGTTG 372 211 1.2e-011 4.8e-007 letter-probability matrix: alength= 4 w= 8 nsites= 373 E= 4.8e-007 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 MOTIF CWCCRCCC DREME-49 # Word RC Word Pos Neg P-value E-value # BEST CWCCRCCC GGGYGGWG 1091 801 9.7e-012 4.0e-007 # CACCGCCC GGGCGGTG 164 93 5.5e-006 2.3e-001 # CTCCACCC GGGTGGAG 404 308 1.7e-004 7.3e+000 # CACCACCC GGGTGGTG 301 232 1.6e-003 6.5e+001 # CTCCGCCC GGGCGGAG 237 178 2.1e-003 8.9e+001 letter-probability matrix: alength= 4 w= 8 nsites= 1117 E= 4.0e-007 0.000000 1.000000 0.000000 0.000000 0.420770 0.000000 0.000000 0.579230 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.640107 0.000000 0.359893 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 MOTIF TGATAATR DREME-50 # Word RC Word Pos Neg P-value E-value # BEST TGATAATR YATTATCA 473 294 4.7e-011 1.9e-006 # TGATAATG CATTATCA 266 161 2.0e-007 8.4e-003 # TGATAATA TATTATCA 208 135 4.7e-005 1.9e+000 letter-probability matrix: alength= 4 w= 8 nsites= 480 E= 1.9e-006 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.435417 0.000000 0.564583 0.000000 MOTIF GTGGCTYA DREME-51 # Word RC Word Pos Neg P-value E-value # BEST GTGGCTYA TRAGCCAC 376 224 2.6e-010 1.1e-005 # GTGGCTCA TGAGCCAC 268 151 5.6e-009 2.3e-004 # GTGGCTTA TAAGCCAC 108 73 5.6e-003 2.3e+002 letter-probability matrix: alength= 4 w= 8 nsites= 376 E= 1.1e-005 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.712766 0.000000 0.287234 1.000000 0.000000 0.000000 0.000000 MOTIF CTGASGC DREME-52 # Word RC Word Pos Neg P-value E-value # BEST CTGASGC GCSTCAG 1402 1098 4.4e-010 1.8e-005 # CTGAGGC GCCTCAG 1096 871 1.7e-007 7.1e-003 # CTGACGC GCGTCAG 311 229 2.3e-004 9.7e+000 letter-probability matrix: alength= 4 w= 7 nsites= 1419 E= 1.8e-005 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.219168 0.780832 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 MOTIF CGCVGCC DREME-53 # Word RC Word Pos Neg P-value E-value # BEST CGCVGCC GGCBGCG 1358 1063 7.5e-010 3.1e-005 # CGCAGCC GGCTGCG 413 299 1.0e-005 4.3e-001 # CGCGGCC GGCCGCG 637 511 1.0e-004 4.3e+000 # CGCCGCC GGCGGCG 399 312 6.0e-004 2.5e+001 letter-probability matrix: alength= 4 w= 7 nsites= 1498 E= 3.1e-005 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.279039 0.273031 0.447931 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 MOTIF CTGTHACC DREME-54 # Word RC Word Pos Neg P-value E-value # BEST CTGTHACC GGTDACAG 511 342 3.5e-009 1.5e-004 # CTGTAACC GGTTACAG 155 90 1.9e-005 8.0e-001 # CTGTCACC GGTGACAG 227 163 6.8e-004 2.8e+001 # CTGTTACC GGTAACAG 133 89 1.9e-003 7.8e+001 letter-probability matrix: alength= 4 w= 8 nsites= 515 E= 1.5e-004 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.300971 0.440777 0.000000 0.258252 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 MOTIF CCCRGGA DREME-55 # Word RC Word Pos Neg P-value E-value # BEST CCCRGGA TCCYGGG 1264 992 4.0e-009 1.7e-004 # CCCAGGA TCCTGGG 946 758 2.5e-006 1.0e-001 # CCCGGGA TCCCGGG 324 243 3.7e-004 1.5e+001 letter-probability matrix: alength= 4 w= 7 nsites= 1294 E= 1.7e-004 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.744977 0.000000 0.255023 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 MOTIF CGGATCAC DREME-56 # Word RC Word Pos Neg P-value E-value # BEST CGGATCAC GTGATCCG 103 36 5.6e-009 2.3e-004 # CGGATCAC GTGATCCG 103 36 5.6e-009 2.3e-004 letter-probability matrix: alength= 4 w= 8 nsites= 103 E= 2.3e-004 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 MOTIF ATAYATAC DREME-57 # Word RC Word Pos Neg P-value E-value # BEST ATAYATAC GTATRTAT 231 124 6.9e-009 2.9e-004 # ATATATAC GTATATAT 113 57 1.0e-005 4.3e-001 # ATACATAC GTATGTAT 121 68 7.0e-005 2.9e+000 letter-probability matrix: alength= 4 w= 8 nsites= 238 E= 2.9e-004 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.512605 0.000000 0.487395 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 MOTIF TGATGCAA DREME-58 # Word RC Word Pos Neg P-value E-value # BEST TGATGCAA TTGCATCA 445 292 8.7e-009 3.6e-004 # TGATGCAA TTGCATCA 445 292 8.7e-009 3.6e-004 letter-probability matrix: alength= 4 w= 8 nsites= 450 E= 3.6e-004 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 MOTIF TTACGBAA DREME-59 # Word RC Word Pos Neg P-value E-value # BEST TTACGBAA TTVCGTAA 108 40 1.0e-008 4.2e-004 # TTACGTAA TTACGTAA 31 8 1.5e-004 6.1e+000 # TTACGCAA TTGCGTAA 47 20 6.5e-004 2.7e+001 # TTACGGAA TTCCGTAA 30 12 4.0e-003 1.6e+002 letter-probability matrix: alength= 4 w= 8 nsites= 108 E= 4.2e-004 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.435185 0.277778 0.287037 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 MOTIF CCRCGCCC DREME-60 # Word RC Word Pos Neg P-value E-value # BEST CCRCGCCC GGGCGYGG 407 267 3.6e-008 1.5e-003 # CCACGCCC GGGCGTGG 195 111 8.8e-007 3.6e-002 # CCGCGCCC GGGCGCGG 214 158 2.1e-003 8.8e+001 letter-probability matrix: alength= 4 w= 8 nsites= 415 E= 1.5e-003 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.474699 0.000000 0.525301 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 MOTIF CATGTGAC DREME-61 # Word RC Word Pos Neg P-value E-value # BEST CATGTGAC GTCACATG 213 116 4.7e-008 2.0e-003 # CATGTGAC GTCACATG 213 116 4.7e-008 2.0e-003 letter-probability matrix: alength= 4 w= 8 nsites= 214 E= 2.0e-003 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 MOTIF GAGATTA DREME-62 # Word RC Word Pos Neg P-value E-value # BEST GAGATTA TAATCTC 714 528 6.2e-008 2.6e-003 # GAGATTA TAATCTC 714 528 6.2e-008 2.6e-003 letter-probability matrix: alength= 4 w= 7 nsites= 723 E= 2.6e-003 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 MOTIF AGAHACAG DREME-63 # Word RC Word Pos Neg P-value E-value # BEST AGAHACAG CTGTDTCT 620 449 8.3e-008 3.4e-003 # AGATACAG CTGTATCT 138 82 9.6e-005 4.0e+000 # AGAAACAG CTGTTTCT 191 140 2.9e-003 1.2e+002 # AGACACAG CTGTGTCT 293 230 3.3e-003 1.4e+002 letter-probability matrix: alength= 4 w= 8 nsites= 624 E= 3.4e-003 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.306090 0.472756 0.000000 0.221154 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 MOTIF CTGCWTTC DREME-64 # Word RC Word Pos Neg P-value E-value # BEST CTGCWTTC GAAWGCAG 493 343 1.1e-007 4.5e-003 # CTGCATTC GAATGCAG 309 208 4.9e-006 2.0e-001 # CTGCTTTC GAAAGCAG 186 135 2.6e-003 1.1e+002 letter-probability matrix: alength= 4 w= 8 nsites= 497 E= 4.5e-003 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.625755 0.000000 0.000000 0.374245 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 MOTIF CGAGATCG DREME-65 # Word RC Word Pos Neg P-value E-value # BEST CGAGATCG CGATCTCG 75 25 2.8e-007 1.2e-002 # CGAGATCG CGATCTCG 75 25 2.8e-007 1.2e-002 letter-probability matrix: alength= 4 w= 8 nsites= 76 E= 1.2e-002 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 MOTIF AGGYCAGG DREME-66 # Word RC Word Pos Neg P-value E-value # BEST AGGYCAGG CCTGRCCT 584 428 4.7e-007 2.0e-002 # AGGTCAGG CCTGACCT 318 235 2.3e-004 9.6e+000 # AGGCCAGG CCTGGCCT 268 195 3.9e-004 1.6e+001 letter-probability matrix: alength= 4 w= 8 nsites= 591 E= 2.0e-002 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.458545 0.000000 0.541455 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 MOTIF GGGCAGGR DREME-67 # Word RC Word Pos Neg P-value E-value # BEST GGGCAGGR YCCTGCCC 822 641 1.1e-006 4.4e-002 # GGGCAGGG CCCTGCCC 507 390 5.0e-005 2.1e+000 # GGGCAGGA TCCTGCCC 321 251 1.9e-003 7.8e+001 letter-probability matrix: alength= 4 w= 8 nsites= 835 E= 4.4e-002 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.388024 0.000000 0.611976 0.000000 # Stopping reason: E-value threshold exceeded # Running time: 21532.96 seconds