# WARNING: this file is not sorted! # db id alt consensus E-value adj_p-value log_adj_p-value bin_location bin_width total_width sites_in_bin total_sites p_success p-value mult_tests 1 VRAVCMGGAAGTGV MEME-1 VRAVCMGGAAGTGV 2.0e-1519 2.6e-1522 -3503.60 0.0 85 487 7640 16831 0.17454 1.1e-1524 243 2 SMGGAAR DREME-1 SMGGAAG 1.1e-1177 1.5e-1180 -2716.67 0.0 94 494 6973 15464 0.19028 5.9e-1183 246 2 GGAARTR DREME-2 GGAARTG 6.7e-699 8.6e-702 -1614.27 0.0 72 494 3651 9528 0.14575 3.5e-704 246 2 AGTAGCTG DREME-6 AGTAGCTG 1.4e0000 1.7e-003 -6.35 0.0 89 493 283 1228 0.18053 7.1e-006 246 2 CMGGAA DREME-8 CMGGAA 3.4e-677 4.4e-680 -1564.29 0.0 81 495 4988 13835 0.16364 1.8e-682 247 2 ACGTSAY DREME-9 ACGTSAY 2.4e-015 3.0e-018 -40.35 0.0 90 494 556 2107 0.18219 1.2e-020 246 2 AANATGGC DREME-12 AAVATGGC 3.5e0000 4.4e-003 -5.43 0.0 209 493 937 1992 0.42394 1.8e-005 246 2 TCACTGCA DREME-13 TCACTGCA 2.0e0000 2.5e-003 -6.00 0.0 97 493 343 1407 0.19675 1.0e-005 246 2 CTGAGTCA DREME-16 CTGAGTCA 1.3e-003 1.7e-006 -13.30 0.0 151 493 356 900 0.30629 6.8e-009 246 2 MGGAAR DREME-17 AGGAAR 1.2e-584 1.5e-587 -1351.22 0.0 101 495 6298 16562 0.20404 6.0e-590 247 2 CATGTGAC DREME-20 CATGTGAC 6.4e-017 8.1e-020 -43.96 0.0 139 493 221 442 0.28195 3.3e-022 246 2 CACGTGK DREME-24 CACGTGG 7.6e-005 9.7e-008 -16.15 0.0 166 494 610 1477 0.33603 3.9e-010 246 2 AATGGCGT DREME-30 AATGGCGT 8.7e-006 1.1e-008 -18.32 0.0 33 493 51 276 0.06694 4.5e-011 246 2 CRCRCGCA DREME-32 CRCRCGCA 1.4e-001 1.7e-004 -8.66 0.0 165 493 509 1274 0.33469 7.0e-007 246 2 RCCAATCA DREME-39 RCCAATCA 3.3e-005 4.1e-008 -17.00 0.0 271 493 559 852 0.54970 1.7e-010 246 2 CYGGGAA DREME-48 CYGGGAA 3.7e-010 4.6e-013 -28.40 0.0 190 494 2025 4585 0.38462 1.9e-015 246 3 M0198_1.02 (SOHLH2)_(Mus_musculus)_(DBD_0.84) NRYNCGTGCN 2.5e0000 3.2e-003 -5.75 0.0 127 491 4301 15728 0.25866 1.3e-005 245 3 M0212_1.02 (TCFL5)_(Mus_musculus)_(DBD_1.00) NBCDCGHGVN 1.1e-005 1.4e-008 -18.10 0.0 173 491 4403 11551 0.35234 5.6e-011 245 3 M0305_1.02 (CREB3L2)_(Mus_musculus)_(DBD_1.00) GCCACGTGD 7.0e-001 8.9e-004 -7.02 0.0 180 492 4572 11850 0.36585 3.6e-006 245 3 M0396_1.02 (OSR2)_(Mus_musculus)_(DBD_1.00) HACRGTAGCN 5.9e-044 7.5e-047 -106.21 0.0 93 491 4046 17250 0.18941 3.1e-049 245 3 M0398_1.02 (ZSCAN10)_(Mus_musculus)_(DBD_0.82) NGKRAGTGCNN 6.6e-188 8.4e-191 -437.66 0.0 66 490 3662 16741 0.13469 3.5e-193 244 3 M0413_1.02 (ZBTB1)_(Mus_musculus)_(DBD_0.99) NDTGCGKGDN 3.0e0000 3.7e-003 -5.59 0.0 37 491 1329 15761 0.07536 1.5e-005 245 3 M0431_1.02 (OSR1)_(Mus_musculus)_(DBD_1.00) MCRGTAGCN 9.2e-058 1.2e-060 -138.00 0.0 92 492 4126 17328 0.18699 4.8e-063 245 3 M0603_1.02 CGBP NNNBCGK 4.7e-018 6.0e-021 -46.57 0.0 144 494 2578 7486 0.29150 2.4e-023 246 3 M0608_1.02 MLL NNNRSCGNDN 1.1e-068 1.4e-071 -163.12 0.0 105 491 3381 11880 0.21385 5.9e-074 245 3 M0609_1.02 DNMT1 NNCCGMNNNN 2.7e-008 3.4e-011 -24.10 0.0 123 491 3770 13558 0.25051 1.4e-013 245 3 M0610_1.02 TET1 NNYRCGYWN 1.2e-001 1.6e-004 -8.76 0.0 126 492 3077 11134 0.25610 6.4e-007 245 3 M0714_1.02 (ENSG00000235187)_(Mus_musculus)_(DBD_1.00) NDBCGGAARY 4.0e-1204 5.1e-1207 -2777.60 0.0 85 491 7188 17320 0.17312 2.1e-1209 245 3 M1359_1.02 (MYPOP)_(Mus_musculus)_(DBD_0.97) NWTTGCGCCR 1.7e0000 2.2e-003 -6.12 0.0 247 491 6967 13355 0.50305 9.0e-006 245 3 M1545_1.02 GMEB1 NNNRCGTNN 5.3e-003 6.7e-006 -11.91 0.0 168 492 4646 12748 0.34146 2.7e-008 245 3 M1882_1.02 IRF1 AAAVNGAAAGTGAAASYRRRN 8.4e-004 1.1e-006 -13.75 0.0 106 480 3400 14097 0.22083 4.4e-009 239 3 M1906_1.02 SP1 GGGGGMGGGGC 2.9e-005 3.7e-008 -17.11 0.0 126 490 4616 16562 0.25714 1.5e-010 244 3 M1915_1.02 (ZNF76)_(Xenopus_laevis)_(DBD_0.84) KCRWKGMATBMTGGGARDTV 3.6e-002 4.6e-005 -10.00 0.0 325 481 10039 14437 0.67568 1.9e-007 240 3 M1955_1.02 STAT1 TTTCYRGGAAA 9.6e-031 1.2e-033 -75.78 0.0 74 490 2788 14751 0.15102 5.0e-036 244 3 M2273_1.02 E2F6 RGGCGGGARRV 2.6e-018 3.3e-021 -47.15 0.0 116 490 4532 16792 0.23673 1.4e-023 244 3 M2275_1.02 ELF1 RRAVCMGGAAGTG 1.6e-1453 2.1e-1456 -3351.83 0.0 80 488 7377 17195 0.16393 8.6e-1459 243 3 M2277_1.02 FLI1 RCAGGAAGTGR 3.4e-1034 4.3e-1037 -2386.32 0.0 82 490 6693 17220 0.16735 1.8e-1039 244 3 M2314_1.02 SP2 SSSVRGRGGCGGGRC 1.1e-006 1.4e-009 -20.39 0.0 122 486 4474 16310 0.25103 5.7e-012 242 3 M2390_1.02 EHF SAGGAAGK 1.5e-522 2.0e-525 -1208.19 0.0 99 493 6110 16727 0.20081 7.9e-528 246 3 M4427_1.02 CTCF NYGGCCASCAGRKGGCRSYVB 3.9e-005 5.0e-008 -16.82 0.0 48 480 1585 13607 0.10000 2.1e-010 239 3 M4451_1.02 ATF3 GGTCACGTGRS 1.7e-009 2.2e-012 -26.83 0.0 168 490 4573 12159 0.34286 9.1e-015 244 3 M4453_1.02 BCL11A ADGRGGAASTGAAAV 8.2e-132 1.0e-134 -308.50 0.0 72 486 3710 16840 0.14815 4.3e-137 242 3 M4461_1.02 ETS1 GCMTBCTGGGARWTGTAGTYY 1.3e-005 1.6e-008 -17.95 0.0 172 480 2462 6187 0.35833 6.7e-011 239 3 M4462_1.02 GABPA VVCCGGAAGTG 1.0e-1528 1.3e-1531 -3524.98 0.0 92 490 7971 16846 0.18776 5.4e-1534 244 3 M4463_1.02 IRF4 DNWSNGGAAVTGAVWSWN 6.7e-002 8.5e-005 -9.37 0.0 63 483 2361 16431 0.13043 3.5e-007 241 3 M4471_1.02 PAX5 BCAGYSRAGCGTGAC 5.6e-003 7.1e-006 -11.86 0.0 144 486 5029 15910 0.29630 2.9e-008 242 3 M4478_1.02 STAT3 SHBVTSAYTTCCRGKAAAYG 2.4e-029 3.1e-032 -72.56 0.0 89 481 3195 14135 0.18503 1.3e-034 240 3 M4481_1.02 USF2 GGTCACGTGRSSSSV 1.8e-006 2.2e-009 -19.92 0.0 176 486 4417 11244 0.36214 9.3e-012 242 3 M4484_1.02 ZNF143 CTGGGARTTGTAGTY 2.4e-004 3.1e-007 -14.99 0.0 180 486 4162 10439 0.37037 1.3e-009 242 3 M4522_1.02 ELK4 CCGGAAGYGS 1.9e-1627 2.4e-1630 -3752.35 0.0 95 491 8338 17053 0.19348 9.7e-1633 245 3 M4527_1.02 SMARCC2 RRACTACAAYTCCCAGVAKGC 8.6e-006 1.1e-008 -18.34 0.0 170 480 2303 5827 0.35417 4.5e-011 239 3 M4537_1.02 E2F4 SGCGGGAARWTBVRR 7.6e-010 9.7e-013 -27.66 0.0 100 486 3611 15612 0.20576 4.0e-015 242 3 M4545_1.02 ZNF683 DRAAAGTGAAAGTGV 3.8e0000 4.8e-003 -5.33 0.0 74 486 2606 15880 0.15226 2.0e-005 242 3 M4553_1.02 BHLHE40 NGKCACGTGC 8.0e-002 1.0e-004 -9.19 0.0 181 491 5358 13774 0.36864 4.2e-007 245 3 M4604_1.02 ZNF263 RRGGAGGASGVVGRGGRGGRG 7.2e-010 9.1e-013 -27.72 0.0 124 480 4710 16521 0.25833 3.8e-015 239 3 M4612_1.02 CTCFL CCRSCAGGGGGCGCY 2.0e-002 2.6e-005 -10.56 0.0 150 486 4439 13474 0.30864 1.1e-007 242 3 M4635_1.02 STAT2 GAAANYGAAACTDAA 2.7e-008 3.4e-011 -24.11 0.0 68 486 2377 14741 0.13992 1.4e-013 242 3 M4680_1.02 BACH1 GTCACGTG 4.9e0000 6.2e-003 -5.08 0.0 123 493 3747 14176 0.24949 2.5e-005 246 3 M5209_1.02 (SP5)_(Drosophila_melanogaster)_(DBD_0.93) GKGGGCGKRKC 7.5e-005 9.5e-008 -16.17 0.0 306 490 10454 16136 0.62449 3.9e-010 244 3 M5234_1.02 (SIM1)_(Drosophila_melanogaster)_(DBD_0.89) GGTCACGTAC 1.8e-004 2.3e-007 -15.28 0.0 91 491 2195 10530 0.18534 9.4e-010 245 3 M5293_1.02 ATF7 NKATGACGTCATHN 8.4e-006 1.1e-008 -18.36 0.0 137 487 1804 5623 0.28131 4.4e-011 243 3 M5320_1.02 CENPB CCCGCDTNNWRCGAA 1.7e0000 2.1e-003 -6.15 0.0 86 486 2214 11508 0.17695 8.8e-006 242 3 M5323_1.02 CREB3 KGRTGACGTCAYNV 1.4e-003 1.8e-006 -13.25 0.0 83 487 1276 6459 0.17043 7.3e-009 243 3 M5325_1.02 CREB3L1 TGRTGACGTGGCAB 6.1e-001 7.7e-004 -7.17 0.0 295 487 5940 9453 0.60575 3.2e-006 243 3 M5377_1.02 ELF4 AACCCGGAAGTR 2.1e-1517 2.7e-1520 -3498.94 0.0 85 489 7361 15977 0.17382 1.1e-1522 244 3 M5398_1.02 ERF ACCGGAAGTR 1.3e-1049 1.6e-1052 -2421.85 0.0 93 491 7034 16533 0.18941 6.5e-1055 245 3 M5420_1.02 ETV1 ACCGGAAGTD 1.0e-1285 1.3e-1288 -2965.46 0.0 93 491 7619 16971 0.18941 5.3e-1291 245 3 M5421_1.02 ETV2 AACCGGAAATR 1.7e-772 2.2e-775 -1783.73 0.0 94 490 6344 16007 0.19184 8.9e-778 244 3 M5422_1.02 ETV3 ACCGGAAGTR 9.8e-1061 1.2e-1063 -2447.43 0.0 93 491 7103 16689 0.18941 5.1e-1066 245 3 M5425_1.02 ETV6 CCGGAASCGGAAGYR 2.2e-612 2.8e-615 -1415.07 0.0 84 486 4830 13130 0.17284 1.1e-617 242 3 M5493_1.02 GMEB2 KTRCGTAA 8.8e-007 1.1e-009 -20.61 0.0 131 493 3618 12342 0.26572 4.5e-012 246 3 M5497_1.02 GRHL1 AACCGGTYTAACCGGTT 5.2e-004 6.5e-007 -14.24 0.0 68 484 1372 8409 0.14050 2.7e-009 241 3 M5509_1.02 HEY1 GRCACGTGBC 1.3e-001 1.6e-004 -8.71 0.0 179 491 4549 11782 0.36456 6.7e-007 245 3 M5591_1.02 KLF13 CAAAAAGGGGCGTGKCAY 2.2e0000 2.9e-003 -5.86 0.0 349 483 6415 8636 0.72257 1.2e-005 241 3 M5593_1.02 KLF16 GGGGGCGTGKC 1.0e0000 1.3e-003 -6.67 0.0 248 490 8365 15976 0.50612 5.2e-006 244 3 M5632_1.02 MLX RTCACGTGAT 3.7e-004 4.6e-007 -14.58 0.0 125 491 2478 8776 0.25458 1.9e-009 245 3 M5856_1.02 SP8 RGKGGGCGTGGY 2.5e0000 3.2e-003 -5.75 0.0 275 489 9500 16418 0.56237 1.3e-005 244 3 M5857_1.02 SPDEF AMCCGGATGTW 9.1e-704 1.2e-706 -1625.48 0.0 80 490 5127 14183 0.16327 4.7e-709 244 3 M5865_1.02 SPIC NAAAAGVGGAAGTA 7.9e-272 1.0e-274 -630.90 0.0 79 487 4462 16380 0.16222 4.1e-277 243 3 M5932_1.02 TFEC VTCAYGTGAY 4.4e0000 5.6e-003 -5.18 0.0 117 491 3770 14925 0.23829 2.3e-005 245 3 M5955_1.02 YY2 WAATGGCGGWY 9.4e0000 1.2e-002 -4.42 0.0 138 490 4458 15062 0.28163 4.9e-005 244 3 M5959_1.02 ZBTB49 TTTCGCYTGGCVSGTCA 7.7e-001 9.8e-004 -6.93 0.0 30 484 442 5757 0.06198 4.1e-006 241 3 M5998_1.02 (CREB5)_(Mus_musculus)_(DBD_1.00) DRTGACGTCATN 1.3e-002 1.6e-005 -11.04 0.0 101 489 1759 7602 0.20654 6.6e-008 244 3 M6119_1.02 SPI1 RAAAAGAGGAAGTGV 1.3e-280 1.6e-283 -651.17 0.0 84 486 4586 15852 0.17284 6.6e-286 242 3 M6123_1.02 (ZNF281)_(Mus_musculus)_(DBD_1.00) GRGKTGGGGGAGGGG 1.2e0000 1.5e-003 -6.49 0.0 110 486 3762 15601 0.22634 6.3e-006 242 3 M6131_1.02 (TFCP2L1)_(Mus_musculus)_(DBD_0.95) CYRGYTYHRDCYRGYTYNRDC 4.2e-005 5.3e-008 -16.75 0.0 44 480 1685 15846 0.09167 2.2e-010 239 3 M6151_1.02 ARNT BYRCGTGC 2.7e-006 3.4e-009 -19.50 0.0 167 493 4686 12773 0.33874 1.4e-011 246 3 M6152_1.02 ATF1 VTGACGTCAV 3.1e-003 3.9e-006 -12.45 0.0 83 491 2430 12956 0.16904 1.6e-008 245 3 M6154_1.02 ATF5 TAAGGRAGARGK 2.7e-010 3.4e-013 -28.71 0.0 71 489 2796 16725 0.14519 1.4e-015 244 3 M6161_1.02 BHLHE41 WSVRKSYCACGTGMHGRRRV 7.0e0000 8.9e-003 -4.72 0.0 365 481 11197 14488 0.75884 3.7e-005 240 3 M6162_1.02 ARNTL GRGTCACGTGTYCM 5.6e-004 7.2e-007 -14.15 0.0 167 487 3518 9470 0.34292 2.9e-009 243 3 M6180_1.02 CREB1 RTGACGTMA 3.4e-004 4.3e-007 -14.67 0.0 82 492 2801 15154 0.16667 1.7e-009 245 3 M6194_1.02 E2F5 SGCGCSAAAH 4.4e-003 5.6e-006 -12.09 0.0 11 491 353 11641 0.02240 2.3e-008 245 3 M6196_1.02 E2F7 WWDGGCGCGAAAM 3.4e-002 4.4e-005 -10.04 0.0 178 488 3349 8556 0.36475 1.8e-007 243 3 M6197_1.02 E4F1 YGTKACGTC 2.1e-006 2.6e-009 -19.76 0.0 88 492 2522 12469 0.17886 1.1e-011 245 3 M6199_1.02 EGR2 DGVGTGGGCGG 2.0e0000 2.6e-003 -5.96 0.0 268 490 8915 15813 0.54694 1.1e-005 244 3 M6200_1.02 EGR3 WGAGTGGGYGT 2.2e-003 2.8e-006 -12.80 0.0 266 490 8880 15715 0.54286 1.1e-008 244 3 M6204_1.02 ELF2 TDNCAGGAAGTRRVT 8.7e-710 1.1e-712 -1639.34 0.0 86 486 6107 16829 0.17695 4.6e-715 242 3 M6205_1.02 ELF3 GGSAAACAGGAARY 5.9e-402 7.5e-405 -930.54 0.0 89 487 5327 16491 0.18275 3.1e-407 243 3 M6206_1.02 ELF5 AHMAGGAWRTW 1.2e-631 1.6e-634 -1459.39 0.0 88 490 6061 17162 0.17959 6.4e-637 244 3 M6207_1.02 ELK1 RCCGGAAGT 2.8e-1375 3.6e-1378 -3171.68 0.0 92 492 7814 17256 0.18699 1.5e-1380 245 3 M6208_1.02 ELK3 VMCHGGAARTSC 6.2e-727 7.9e-730 -1678.83 0.0 93 489 6342 16492 0.19018 3.2e-732 244 3 M6213_1.02 ERG ACCGGAARTSM 8.2e-997 1.0e-999 -2300.25 0.0 92 490 6861 16432 0.18776 4.2e-1002 244 3 M6221_1.02 ETS2 VMVGGAAGTKS 1.0e-822 1.3e-825 -1899.36 0.0 78 490 6084 17325 0.15918 5.4e-828 244 3 M6222_1.02 ETV4 SAGGAAGY 8.8e-988 1.1e-990 -2279.44 0.0 93 493 7131 17351 0.18864 4.6e-993 246 3 M6223_1.02 ETV5 GHCAGGAAGWWAY 6.0e-150 7.7e-153 -350.26 0.0 98 488 4908 17183 0.20082 3.2e-155 243 3 M6224_1.02 ETV7 KCMHCAGGAAGTRACDY 3.7e-487 4.6e-490 -1126.73 0.0 78 484 4564 14106 0.16116 1.9e-492 241 3 M6226_1.02 FEV CAGGAARTDA 1.6e-735 2.1e-738 -1698.59 0.0 81 491 5923 16923 0.16497 8.4e-741 245 3 M6275_1.02 HIF1A SBSTACGTGCSB 2.3e-006 2.9e-009 -19.64 0.0 179 489 5302 13459 0.36605 1.2e-011 244 3 M6276_1.02 HINFP DMSNHMGCGGACGTTV 6.5e-060 8.3e-063 -142.95 0.0 69 485 2159 10635 0.14227 3.4e-065 242 3 M6278_1.02 HLTF KANKGCTGSMAM 5.6e0000 7.1e-003 -4.94 0.0 87 489 3238 17058 0.17791 2.9e-005 244 3 M6308_1.02 IRF2 SGAAAGYGAAASYV 5.2e-015 6.5e-018 -39.57 0.0 85 487 3137 15446 0.17454 2.7e-020 243 3 M6309_1.02 IRF3 GGAAAGBGAAASBRRRA 1.0e-007 1.3e-010 -22.77 0.0 80 484 2923 15649 0.16529 5.4e-013 241 3 M6313_1.02 IRF8 GRGRAAVTGAAASYR 3.7e-038 4.7e-041 -92.85 0.0 92 486 3890 16758 0.18930 2.0e-043 242 3 M6330_1.02 MAFA STGCTGACBMYGCARYHTYCV 1.2e0000 1.6e-003 -6.46 0.0 96 480 3577 16746 0.20000 6.6e-006 239 3 M6336_1.02 MAZ RGGGDRGGGAGGGRGGG 6.0e-002 7.6e-005 -9.48 0.0 136 484 4929 16510 0.28099 3.2e-007 241 3 M6337_1.02 MBD2 SSGKCCGGMGR 1.2e-008 1.5e-011 -24.90 0.0 62 490 2000 13487 0.12653 6.3e-014 244 3 M6339_1.02 MECP2 YYCCGGS 7.5e-201 9.5e-204 -467.48 0.0 64 494 3489 16056 0.12955 3.9e-206 246 3 M6352_1.02 MYCN CCACGTGS 9.3e-002 1.2e-004 -9.05 0.0 167 493 5119 14288 0.33874 4.8e-007 246 3 M6376_1.02 NKX2-5 TYAAGTG 8.0e-041 1.0e-043 -99.00 0.0 58 494 2585 16763 0.11741 4.1e-046 246 3 M6379_1.02 NKX3-2 VRYTAAGTGGV 9.9e-005 1.3e-007 -15.89 0.0 62 490 2363 16575 0.12653 5.2e-010 244 3 M6381_1.02 NR0B1 YSTCCCMCKC 3.1e-002 3.9e-005 -10.15 0.0 255 491 9140 16957 0.51935 1.6e-007 245 3 M6410_1.02 PAX6 TSAWGCGTRAA 8.7e0000 1.1e-002 -4.50 0.0 68 490 2386 15950 0.13878 4.6e-005 244 3 M6416_1.02 CBFB YYTGTGGTYDB 4.1e-001 5.3e-004 -7.55 0.0 178 490 6489 17065 0.36327 2.2e-006 244 3 M6442_1.02 PURA CCMBGCCCNCCMMYWCC 1.4e-003 1.8e-006 -13.25 0.0 120 484 4554 17068 0.24793 7.3e-009 241 3 M6482_1.02 SP3 VGVVGGGGGCGGGGCBRGSS 7.9e0000 1.0e-002 -4.60 0.0 127 481 4458 16045 0.26403 4.2e-005 240 3 M6485_1.02 SPIB ARAAASMGGAAS 4.5e-314 5.7e-317 -728.18 0.0 89 489 5099 16778 0.18200 2.3e-319 244 3 M6491_1.02 STAT5A YTTCYVRGAAWT 7.5e-010 9.5e-013 -27.68 0.0 73 489 2675 15554 0.14928 3.9e-015 244 3 M6492_1.02 STAT5B DTTTCYDGGAATT 2.8e-007 3.6e-010 -21.75 0.0 66 488 2029 12950 0.13525 1.5e-012 243 3 M6514_1.02 TFCP2 SCCWGMNMDSRCCRGA 4.4e-004 5.5e-007 -14.41 0.0 65 485 2515 16801 0.13402 2.3e-009 242 3 M6515_1.02 TFDP1 AWWKRGCGGGAAAY 5.8e-016 7.3e-019 -41.76 0.0 155 487 4683 13122 0.31828 3.0e-021 243 3 M6518_1.02 TFEB RGTCACGTG 5.5e-010 7.0e-013 -27.98 0.0 122 492 2488 8740 0.24797 2.9e-015 245 3 M6536_1.02 XBP1 GACGTGKCMHWW 2.8e-003 3.6e-006 -12.53 0.0 55 489 1410 10873 0.11247 1.5e-008 244 3 M6537_1.02 YBX1 BSKGATTSSCY 6.5e-001 8.3e-004 -7.10 0.0 260 490 9431 17217 0.53061 3.4e-006 244 3 M6545_1.02 HIVEP2 GGYDGGGWAACYSS 5.2e-004 6.6e-007 -14.24 0.0 305 487 11051 17059 0.62628 2.7e-009 243 ## # Detailed descriptions of columns in this file: # # db: The name of the database (file name) that contains the motif. # id: A name for the motif that is unique in the motif database file. # alt: An alternate name of the motif that may be provided # in the motif database file. # consensus: A consensus sequence computed from the motif. # E-value: The expected number motifs that would have least one. # region as enriched for best matches to the motif as the reported region. # The E-value is the p-value multiplied by the number of motifs in the # input database(s). # adj_p-value: The probability that any tested region would be as enriched for # best matches to this motif as the reported region is. # By default the p-value is calculated by using the one-tailed binomial # test on the number of sequences with a match to the motif # that have their best match in the reported region, corrected for # the number of regions and score thresholds tested. # The test assumes that the probability that the best match in a sequence # falls in the region is the region width divided by the # number of places a motif # can align in the sequence (sequence length minus motif width plus 1). # When CentriMo is run in discriminative mode with a negative # set of sequences, the p-value of a region is calculated # using the Fisher exact test on the # enrichment of best matches in the positive sequences relative # to the negative sequences, corrected # for the number of regions and score thresholds tested. # The test assumes that the probability that the best match (if any) # falls into a given region # is the same for all positive and negative sequences. # log_adj_p-value: Log of adjusted p-value. # bin_location: Location of the center of the most enriched region. # bin_width: The width (in sequence positions) of the most enriched region. # A best match to the motif is counted as being in the region if the # center of the motif falls in the region. # total_width: The window maximal size which can be reached for this motif: # rounded(sequence length - motif length +1)/2 # sites_in_bin: The number of (positive) sequences whose best match to the motif # falls in the reported region. # Note: This number may be less than the number of # (positive) sequences that have a best match in the region. # The reason for this is that a sequence may have many matches that score # equally best. # If n matches have the best score in a sequence, 1/n is added to the # appropriate bin for each match. # total_sites: The number of sequences containing a match to the motif # above the score threshold. # p_success: The probability of falling in the enriched window: # bin width / total width # p-value: The uncorrected p-value before it gets adjusted to the # number of multiple tests to give the adjusted p-value. # mult_tests: This is the number of multiple tests (n) done for this motif. # It was used to correct the original p-value of a region for # multiple tests using the formula: # p' = 1 - (1-p)^n where p is the uncorrected p-value. # The number of multiple tests is the number of regions # considered times the number of score thresholds considered. # It depends on the motif length, sequence length, and the type of # optimizations being done (central enrichment, local enrichment, # score optimization).