# DREME 4.12.0 # command: dreme -v 1 -oc /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeK562eGFPComparisons/CEBPB-Antibody.IDR0.05.filt.narrowPeak.summitPlusMinus250bp.MemeChipResultsDefaultMax/dreme_out -png -dna -p /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeK562eGFPComparisons/CEBPB-Antibody.IDR0.05.filt.narrowPeak.summitPlusMinus250bp.MemeChipResultsDefaultMax/seqs-centered -n /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeK562eGFPComparisons/CEBPB-Antibody.IDR0.05.filt.narrowPeak.summitPlusMinus250bp.MemeChipResultsDefaultMax/seqs-shuffled # positives: 46464 from /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeK562eGFPComparisons/CEBPB-Antibody.IDR0.05.filt.narrowPeak.summitPlusMinus250bp.MemeChipResultsDefaultMax/seqs-centered (Wed Nov 22 12:43:31 PST 2017) # negatives: 46464 from /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeK562eGFPComparisons/CEBPB-Antibody.IDR0.05.filt.narrowPeak.summitPlusMinus250bp.MemeChipResultsDefaultMax/seqs-shuffled (Wed Nov 22 12:43:31 PST 2017) # host: kali # when: Wed Nov 22 13:02:18 PST 2017 MEME version 4.12.0 ALPHABET "DNA" DNA-LIKE A "Adenine" CC0000 ~ T "Thymine" 008000 C "Cytosine" 0000CC ~ G "Guanine" FFB300 N "Any base" = ACGT X = ACGT . = ACGT V "Not T" = ACG H "Not G" = ACT D "Not C" = AGT B "Not A" = CGT M "Amino" = AC R "Purine" = AG W "Weak" = AT S "Strong" = CG Y "Pyrimidine" = CT K "Keto" = GT U = T END ALPHABET strands: + - Background letter frequencies (from dataset): A 0.279 C 0.220 G 0.221 T 0.280 MOTIF TKDYGCAA DREME-1 # Word RC Word Pos Neg P-value E-value # BEST TKDYGCAA TTGCRHMA 28352 2524 3.0e-7909 1.4e-7904 # TTGTGCAA TTGCACAA 8133 398 4.4e-2026 2.0e-2021 # TGATGCAA TTGCATCA 5761 392 2.5e-1293 1.1e-1288 # TGGCGCAA TTGCGCCA 2280 65 1.2e-590 5.7e-586 # TTACGCAA TTGCGTAA 2107 37 2.2e-576 9.9e-572 # TTATGCAA TTGCATAA 2588 284 3.2e-477 1.5e-472 # TTGCGCAA TTGCGCAA 1397 41 2.9e-358 1.3e-353 # TGACGCAA TTGCGTCA 1433 50 5.8e-358 2.6e-353 # TTTCGCAA TTGCGAAA 1261 65 6.7e-292 3.1e-287 # TGTTGCAA TTGCAACA 1949 398 1.4e-250 6.5e-246 # TGTCGCAA TTGCGACA 664 64 7.6e-128 3.5e-123 # TTTTGCAA TTGCAAAA 1050 526 2.6e-041 1.2e-036 # TGGTGCAA TTGCACCA 682 288 3.5e-038 1.6e-033 letter-probability matrix: alength= 4 w= 8 nsites= 29419 E= 1.4e-7904 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.436045 0.563955 0.407866 0.000000 0.427003 0.165131 0.000000 0.311295 0.000000 0.688705 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 MOTIF AGGCTGSA DREME-2 # Word RC Word Pos Neg P-value E-value # BEST AGGCTGSA TSCAGCCT 3201 500 8.6e-498 3.9e-493 # AGGCTGGA TCCAGCCT 2416 203 2.8e-492 1.3e-487 # AGGCTGCA TGCAGCCT 1132 297 7.9e-117 3.6e-112 letter-probability matrix: alength= 4 w= 8 nsites= 3587 E= 3.9e-493 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.319766 0.680234 0.000000 1.000000 0.000000 0.000000 0.000000 MOTIF TTGCYYAA DREME-3 # Word RC Word Pos Neg P-value E-value # BEST TTGCYYAA TTRRGCAA 4886 1114 9.1e-594 4.1e-589 # TTGCTCAA TTGAGCAA 1973 351 9.9e-280 4.5e-275 # TTGCCCAA TTGGGCAA 1272 280 1.4e-153 6.3e-149 # TTGCTTAA TTAAGCAA 1050 297 2.1e-100 9.7e-096 # TTGCCTAA TTAGGCAA 670 188 5.6e-065 2.5e-060 letter-probability matrix: alength= 4 w= 8 nsites= 5011 E= 4.1e-589 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.390740 0.000000 0.609260 0.000000 0.653163 0.000000 0.346837 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 MOTIF TTGDGWAA DREME-4 # Word RC Word Pos Neg P-value E-value # BEST TTGDGWAA TTWCHCAA 4902 1532 4.2e-434 1.9e-429 # TTGTGAAA TTTCACAA 1770 392 3.7e-213 1.7e-208 # TTGTGTAA TTACACAA 1369 276 4.5e-177 2.0e-172 # TTGGGAAA TTTCCCAA 610 252 1.3e-035 5.9e-031 # TTGGGTAA TTACCCAA 340 135 7.4e-022 3.3e-017 # TTGAGTAA TTACTCAA 386 182 2.9e-018 1.3e-013 # TTGAGAAA TTTCTCAA 560 318 9.9e-017 4.5e-012 letter-probability matrix: alength= 4 w= 8 nsites= 5096 E= 1.9e-429 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.186421 0.000000 0.187598 0.625981 0.000000 0.000000 1.000000 0.000000 0.584772 0.000000 0.000000 0.415228 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 MOTIF CNRCCTCC DREME-5 # Word RC Word Pos Neg P-value E-value # BEST CNRCCTCC GGAGGYNG 3529 1016 2.7e-337 1.2e-332 # CAACCTCC GGAGGTTG 875 163 8.4e-120 3.8e-115 # CCGCCTCC GGAGGCGG 668 85 3.3e-114 1.5e-109 # CAGCCTCC GGAGGCTG 819 189 3.2e-095 1.4e-090 # CCACCTCC GGAGGTGG 623 166 9.1e-064 4.1e-059 # CTGCCTCC GGAGGCAG 743 242 1.1e-060 5.0e-056 # CGACCTCC GGAGGTCG 124 36 7.7e-013 3.5e-008 # CTACCTCC GGAGGTAG 149 68 1.9e-008 8.6e-004 # CGGCCTCC GGAGGCCG 138 85 2.3e-004 1.0e+001 letter-probability matrix: alength= 4 w= 8 nsites= 3832 E= 1.2e-332 0.000000 1.000000 0.000000 0.000000 0.405010 0.293841 0.068633 0.232516 0.405271 0.000000 0.594729 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 MOTIF CAGTGAGC DREME-6 # Word RC Word Pos Neg P-value E-value # BEST CAGTGAGC GCTCACTG 1774 233 4.4e-299 2.0e-294 # CAGTGAGC GCTCACTG 1774 233 4.4e-299 2.0e-294 letter-probability matrix: alength= 4 w= 8 nsites= 1786 E= 2.0e-294 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 MOTIF GGGYRACA DREME-7 # Word RC Word Pos Neg P-value E-value # BEST GGGYRACA TGTYRCCC 2157 425 2.8e-285 1.3e-280 # GGGTGACA TGTCACCC 1037 147 1.6e-167 7.3e-163 # GGGCGACA TGTCGCCC 382 42 2.7e-070 1.2e-065 # GGGCAACA TGTTGCCC 614 165 2.4e-062 1.1e-057 # GGGTAACA TGTTACCC 125 72 9.6e-005 4.3e+000 letter-probability matrix: alength= 4 w= 8 nsites= 2168 E= 1.3e-280 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.461255 0.000000 0.538745 0.341790 0.000000 0.658210 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 MOTIF TGAYGWAA DREME-8 # Word RC Word Pos Neg P-value E-value # BEST TGAYGWAA TTWCRTCA 2665 702 1.2e-276 5.3e-272 # TGATGAAA TTTCATCA 1427 380 3.7e-145 1.7e-140 # TGATGTAA TTACATCA 813 231 1.5e-077 6.6e-073 # TGACGTAA TTACGTCA 272 33 2.4e-048 1.1e-043 # TGACGAAA TTTCGTCA 172 61 9.3e-014 4.2e-009 letter-probability matrix: alength= 4 w= 8 nsites= 2722 E= 5.3e-272 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.164217 0.000000 0.835783 0.000000 0.000000 1.000000 0.000000 0.596253 0.000000 0.000000 0.403747 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 MOTIF AAAANAAA DREME-9 # Word RC Word Pos Neg P-value E-value # BEST AAAANAAA TTTNTTTT 5303 2542 1.6e-237 7.3e-233 # AAAAAAAA TTTTTTTT 2588 897 3.2e-195 1.5e-190 # AAAAGAAA TTTCTTTT 1268 630 1.3e-050 6.0e-046 # AAAATAAA TTTATTTT 967 519 2.5e-032 1.1e-027 # AAAACAAA TTTGTTTT 1183 694 1.3e-030 5.7e-026 letter-probability matrix: alength= 4 w= 8 nsites= 6473 E= 7.3e-233 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.473505 0.191410 0.186003 0.149081 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 MOTIF ACYCYGTC DREME-10 # Word RC Word Pos Neg P-value E-value # BEST ACYCYGTC GACRGRGT 1588 364 1.3e-185 5.9e-181 # ACTCTGTC GACAGAGT 731 164 3.9e-087 1.7e-082 # ACTCCGTC GACGGAGT 308 38 3.8e-054 1.7e-049 # ACCCTGTC GACAGGGT 496 139 1.6e-048 7.0e-044 # ACCCCGTC GACGGGGT 89 24 2.8e-010 1.2e-005 letter-probability matrix: alength= 4 w= 8 nsites= 1648 E= 5.9e-181 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.355583 0.000000 0.644417 0.000000 1.000000 0.000000 0.000000 0.000000 0.240898 0.000000 0.759102 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 MOTIF RGGAAR DREME-11 # Word RC Word Pos Neg P-value E-value # BEST RGGAAR YTTCCY 13719 10193 6.5e-155 2.9e-150 # AGGAAG CTTCCT 4589 3069 4.0e-074 1.8e-069 # AGGAAA TTTCCT 4990 3437 5.5e-071 2.4e-066 # GGGAAG CTTCCC 3270 2487 8.1e-027 3.6e-022 # GGGAAA TTTCCC 2882 2223 1.2e-021 5.4e-017 letter-probability matrix: alength= 4 w= 6 nsites= 16434 E= 2.9e-150 0.612024 0.000000 0.387976 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.499148 0.000000 0.500852 0.000000 MOTIF TTACGWAA DREME-12 # Word RC Word Pos Neg P-value E-value # BEST TTACGWAA TTWCGTAA 700 57 5.6e-143 2.5e-138 # TTACGTAA TTACGTAA 472 14 6.5e-121 2.9e-116 # TTACGAAA TTTCGTAA 229 43 3.2e-032 1.4e-027 letter-probability matrix: alength= 4 w= 8 nsites= 702 E= 2.5e-138 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.326211 0.000000 0.000000 0.673789 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 MOTIF AGATAAV DREME-13 # Word RC Word Pos Neg P-value E-value # BEST AGATAAV BTTATCT 3435 1724 3.5e-135 1.5e-130 # AGATAAG CTTATCT 1470 554 1.3e-097 5.9e-093 # AGATAAA TTTATCT 1305 755 4.3e-035 1.9e-030 # AGATAAC GTTATCT 747 439 9.2e-020 4.1e-015 letter-probability matrix: alength= 4 w= 7 nsites= 3584 E= 1.5e-130 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.371931 0.209821 0.418248 0.000000 MOTIF TGAGTCAB DREME-14 # Word RC Word Pos Neg P-value E-value # BEST TGAGTCAB VTGACTCA 1672 601 4.8e-119 2.1e-114 # TGAGTCAT ATGACTCA 746 216 7.8e-070 3.5e-065 # TGAGTCAC GTGACTCA 505 153 2.1e-045 9.4e-041 # TGAGTCAG CTGACTCA 457 233 4.1e-018 1.8e-013 letter-probability matrix: alength= 4 w= 8 nsites= 1735 E= 2.1e-114 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.293948 0.266859 0.439193 MOTIF CCMCRCCC DREME-15 # Word RC Word Pos Neg P-value E-value # BEST CCMCRCCC GGGYGKGG 1429 473 1.2e-113 5.2e-109 # CCCCGCCC GGGCGGGG 421 90 9.6e-053 4.3e-048 # CCCCACCC GGGTGGGG 460 167 4.2e-033 1.9e-028 # CCACACCC GGGTGTGG 396 170 3.4e-022 1.5e-017 # CCACGCCC GGGCGTGG 204 56 2.7e-021 1.2e-016 letter-probability matrix: alength= 4 w= 8 nsites= 1520 E= 5.2e-109 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.400658 0.599342 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.567105 0.000000 0.432895 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 MOTIF CKTGARCC DREME-16 # Word RC Word Pos Neg P-value E-value # BEST CKTGARCC GGYTCAMG 1413 480 1.2e-108 5.3e-104 # CTTGAGCC GGCTCAAG 650 211 1.8e-053 7.8e-049 # CTTGAACC GGTTCAAG 560 187 1.1e-044 5.0e-040 # CGTGAACC GGTTCACG 96 33 1.2e-008 5.5e-004 # CGTGAGCC GGCTCACG 116 50 1.6e-007 6.9e-003 letter-probability matrix: alength= 4 w= 8 nsites= 1425 E= 5.3e-104 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.149474 0.850526 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.460351 0.000000 0.539649 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 MOTIF CTCCDSCC DREME-17 # Word RC Word Pos Neg P-value E-value # BEST CTCCDSCC GGSHGGAG 1935 812 5.6e-108 2.5e-103 # CTCCTGCC GGCAGGAG 676 210 1.4e-058 6.2e-054 # CTCCTCCC GGGAGGAG 436 179 3.7e-026 1.6e-021 # CTCCACCC GGGTGGAG 316 154 2.7e-014 1.2e-009 # CTCCAGCC GGCTGGAG 318 168 4.2e-012 1.9e-007 # CTCCGCCC GGGCGGAG 146 65 1.2e-008 5.3e-004 # CTCCGGCC GGCCGGAG 87 52 1.9e-003 8.3e+001 letter-probability matrix: alength= 4 w= 8 nsites= 1990 E= 2.5e-103 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.320101 0.000000 0.117588 0.562312 0.000000 0.455276 0.544724 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 MOTIF TGARGCAA DREME-18 # Word RC Word Pos Neg P-value E-value # BEST TGARGCAA TTGCYTCA 1691 704 1.4e-095 6.0e-091 # TGAAGCAA TTGCTTCA 984 389 7.3e-061 3.2e-056 # TGAGGCAA TTGCCTCA 718 316 2.8e-037 1.2e-032 letter-probability matrix: alength= 4 w= 8 nsites= 1719 E= 6.0e-091 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.577661 0.000000 0.422339 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 MOTIF GGTGRTGR DREME-19 # Word RC Word Pos Neg P-value E-value # BEST GGTGRTGR YCAYCACC 1489 632 2.4e-081 1.0e-076 # GGTGATGG CCATCACC 612 173 5.2e-059 2.3e-054 # GGTGGTGA TCACCACC 414 153 3.3e-029 1.4e-024 # GGTGATGA TCATCACC 371 162 2.7e-020 1.2e-015 # GGTGGTGG CCACCACC 307 159 2.9e-012 1.3e-007 letter-probability matrix: alength= 4 w= 8 nsites= 1534 E= 1.0e-076 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.588657 0.000000 0.411343 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.443286 0.000000 0.556714 0.000000 MOTIF GAGYRAGA DREME-20 # Word RC Word Pos Neg P-value E-value # BEST GAGYRAGA TCTYRCTC 1436 608 8.2e-079 3.6e-074 # GAGCAAGA TCTTGCTC 608 251 1.5e-035 6.8e-031 # GAGCGAGA TCTCGCTC 233 56 3.4e-027 1.5e-022 # GAGTGAGA TCTCACTC 451 213 5.2e-021 2.3e-016 # GAGTAAGA TCTTACTC 148 96 5.2e-004 2.3e+001 letter-probability matrix: alength= 4 w= 8 nsites= 1444 E= 3.6e-074 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.583102 0.000000 0.416898 0.524238 0.000000 0.475762 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 MOTIF GTAYATTY DREME-21 # Word RC Word Pos Neg P-value E-value # BEST GTAYATTY RAATRTAC 1172 453 6.2e-075 2.7e-070 # GTACATTC GAATGTAC 361 90 5.6e-040 2.5e-035 # GTATATTC GAATATAC 314 83 3.9e-033 1.7e-028 # GTACATTT AAATGTAC 322 153 2.8e-015 1.2e-010 # GTATATTT AAATATAC 213 128 2.3e-006 1.0e-001 letter-probability matrix: alength= 4 w= 8 nsites= 1219 E= 2.7e-070 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.566858 0.000000 0.433142 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.556194 0.000000 0.443806 MOTIF CYRTCTC DREME-22 # Word RC Word Pos Neg P-value E-value # BEST CYRTCTC GAGAYRG 3134 1948 2.2e-066 9.6e-062 # CCATCTC GAGATGG 1181 638 1.5e-038 6.7e-034 # CTGTCTC GAGACAG 1158 767 1.0e-019 4.4e-015 # CCGTCTC GAGACGG 251 145 5.2e-008 2.3e-003 # CTATCTC GAGATAG 604 435 7.5e-008 3.3e-003 letter-probability matrix: alength= 4 w= 7 nsites= 3228 E= 9.6e-062 0.000000 1.000000 0.000000 0.000000 0.000000 0.446406 0.000000 0.553594 0.557931 0.000000 0.442069 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 MOTIF CTGCACTC DREME-23 # Word RC Word Pos Neg P-value E-value # BEST CTGCACTC GAGTGCAG 724 218 6.2e-065 2.7e-060 # CTGCACTC GAGTGCAG 724 218 6.2e-065 2.7e-060 letter-probability matrix: alength= 4 w= 8 nsites= 727 E= 2.7e-060 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 MOTIF CCTCCC DREME-24 # Word RC Word Pos Neg P-value E-value # BEST CCTCCC GGGAGG 2918 1862 4.8e-056 2.1e-051 # CCTCCC GGGAGG 2918 1862 4.8e-056 2.1e-051 letter-probability matrix: alength= 4 w= 6 nsites= 3076 E= 2.1e-051 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 MOTIF AMCTCCTG DREME-25 # Word RC Word Pos Neg P-value E-value # BEST AMCTCCTG CAGGAGKT 771 275 7.5e-056 3.3e-051 # AACTCCTG CAGGAGTT 553 158 7.3e-053 3.2e-048 # ACCTCCTG CAGGAGGT 219 118 1.9e-008 8.5e-004 letter-probability matrix: alength= 4 w= 8 nsites= 774 E= 3.3e-051 1.000000 0.000000 0.000000 0.000000 0.717054 0.282946 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 MOTIF TTYTARAA DREME-26 # Word RC Word Pos Neg P-value E-value # BEST TTYTARAA TTYTARAA 1211 572 5.7e-054 2.5e-049 # TTTTAAAA TTTTAAAA 515 237 5.3e-025 2.3e-020 # TTCTAAAA TTTTAGAA 521 246 4.9e-024 2.1e-019 # TTCTAGAA TTCTAGAA 185 89 3.2e-009 1.4e-004 letter-probability matrix: alength= 4 w= 8 nsites= 1231 E= 2.5e-049 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.360682 0.000000 0.639318 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 0.631194 0.000000 0.368806 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 MOTIF GTGAGCYR DREME-27 # Word RC Word Pos Neg P-value E-value # BEST GTGAGCYR YRGCTCAC 1117 508 8.3e-054 3.6e-049 # GTGAGCTA TAGCTCAC 260 83 9.3e-023 4.1e-018 # GTGAGCCA TGGCTCAC 383 168 9.9e-021 4.3e-016 # GTGAGCCG CGGCTCAC 145 55 7.3e-011 3.2e-006 # GTGAGCTG CAGCTCAC 332 205 2.2e-008 9.4e-004 letter-probability matrix: alength= 4 w= 8 nsites= 1122 E= 3.6e-049 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.472371 0.000000 0.527629 0.573975 0.000000 0.426025 0.000000 MOTIF CCCRGCTA DREME-28 # Word RC Word Pos Neg P-value E-value # BEST CCCRGCTA TAGCYGGG 475 118 2.7e-052 1.2e-047 # CCCAGCTA TAGCTGGG 431 99 6.2e-051 2.7e-046 # CCCGGCTA TAGCCGGG 59 19 3.2e-006 1.4e-001 letter-probability matrix: alength= 4 w= 8 nsites= 506 E= 1.2e-047 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.883399 0.000000 0.116601 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 MOTIF CYACTGAA DREME-29 # Word RC Word Pos Neg P-value E-value # BEST CYACTGAA TTCAGTRG 809 342 6.0e-045 2.6e-040 # CCACTGAA TTCAGTGG 568 218 2.3e-037 1.0e-032 # CTACTGAA TTCAGTAG 243 125 3.6e-010 1.6e-005 letter-probability matrix: alength= 4 w= 8 nsites= 812 E= 2.6e-040 0.000000 1.000000 0.000000 0.000000 0.000000 0.699507 0.000000 0.300493 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 MOTIF TGABGTCA DREME-30 # Word RC Word Pos Neg P-value E-value # BEST TGABGTCA TGACVTCA 930 467 1.5e-036 6.7e-032 # TGACGTCA TGACGTCA 185 19 9.9e-036 4.3e-031 # TGATGTCA TGACATCA 431 254 5.7e-012 2.5e-007 # TGAGGTCA TGACCTCA 322 195 1.2e-008 5.1e-004 letter-probability matrix: alength= 4 w= 8 nsites= 964 E= 6.7e-032 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.197095 0.339212 0.463693 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 MOTIF TWAAAATR DREME-31 # Word RC Word Pos Neg P-value E-value # BEST TWAAAATR YATTTTWA 1857 1181 3.6e-036 1.6e-031 # TAAAAATA TATTTTTA 506 289 4.9e-015 2.2e-010 # TAAAAATG CATTTTTA 529 326 1.6e-012 6.8e-008 # TTAAAATG CATTTTAA 504 310 4.4e-012 1.9e-007 # TTAAAATA TATTTTAA 363 277 3.7e-004 1.6e+001 letter-probability matrix: alength= 4 w= 8 nsites= 1925 E= 1.6e-031 0.000000 0.000000 0.000000 1.000000 0.541299 0.000000 0.000000 0.458701 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.456104 0.000000 0.543896 0.000000 MOTIF CTGTAMHC DREME-32 # Word RC Word Pos Neg P-value E-value # BEST CTGTAMHC GDKTACAG 1122 621 2.2e-034 9.4e-030 # CTGTAATC GATTACAG 277 106 4.1e-019 1.8e-014 # CTGTACAC GTGTACAG 237 119 1.8e-010 7.9e-006 # CTGTAACC GGTTACAG 162 98 4.2e-005 1.8e+000 # CTGTACCC GGGTACAG 124 72 1.2e-004 5.4e+000 # CTGTACTC GAGTACAG 160 103 2.6e-004 1.1e+001 # CTGTAAAC GTTTACAG 171 127 6.2e-003 2.7e+002 letter-probability matrix: alength= 4 w= 8 nsites= 1134 E= 9.4e-030 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 0.538801 0.461199 0.000000 0.000000 0.361552 0.253086 0.000000 0.385362 0.000000 1.000000 0.000000 0.000000 MOTIF KARATA DREME-33 # Word RC Word Pos Neg P-value E-value # BEST KARATA TATYTM 7542 6236 9.2e-034 4.0e-029 # GAAATA TATTTC 2565 2005 1.0e-017 4.5e-013 # GAGATA TATCTC 1114 826 2.1e-011 9.2e-007 # TAAATA TATTTA 3117 2719 3.9e-008 1.7e-003 # TAGATA TATCTA 1471 1217 3.6e-007 1.6e-002 letter-probability matrix: alength= 4 w= 6 nsites= 8515 E= 4.0e-029 0.000000 0.000000 0.439577 0.560423 1.000000 0.000000 0.000000 0.000000 0.695009 0.000000 0.304991 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 MOTIF GTTCTRGA DREME-34 # Word RC Word Pos Neg P-value E-value # BEST GTTCTRGA TCYAGAAC 504 207 5.7e-030 2.5e-025 # GTTCTGGA TCCAGAAC 407 153 4.7e-028 2.1e-023 # GTTCTAGA TCTAGAAC 97 54 2.9e-004 1.3e+001 letter-probability matrix: alength= 4 w= 8 nsites= 504 E= 2.5e-025 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.192460 0.000000 0.807540 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 MOTIF CCACGTGD DREME-35 # Word RC Word Pos Neg P-value E-value # BEST CCACGTGD HCACGTGG 288 82 2.3e-028 9.9e-024 # CCACGTGA TCACGTGG 109 26 1.3e-013 5.8e-009 # CCACGTGT ACACGTGG 99 30 4.1e-010 1.8e-005 # CCACGTGG CCACGTGG 80 26 7.0e-008 3.0e-003 letter-probability matrix: alength= 4 w= 8 nsites= 288 E= 9.9e-024 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.378472 0.000000 0.277778 0.343750 MOTIF AGRKGGCG DREME-36 # Word RC Word Pos Neg P-value E-value # BEST AGRKGGCG CGCCMYCT 473 212 2.9e-024 1.3e-019 # AGATGGCG CGCCATCT 109 35 2.4e-010 1.0e-005 # AGAGGGCG CGCCCTCT 137 58 7.2e-009 3.1e-004 # AGGGGGCG CGCCCCCT 136 71 3.6e-006 1.6e-001 # AGGTGGCG CGCCACCT 97 48 2.9e-005 1.2e+000 letter-probability matrix: alength= 4 w= 8 nsites= 479 E= 1.3e-019 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.513570 0.000000 0.486430 0.000000 0.000000 0.000000 0.569937 0.430063 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 MOTIF CTTATCAS DREME-37 # Word RC Word Pos Neg P-value E-value # BEST CTTATCAS STGATAAG 512 243 2.1e-023 9.1e-019 # CTTATCAG CTGATAAG 316 132 7.3e-019 3.2e-014 # CTTATCAC GTGATAAG 199 112 4.4e-007 1.9e-002 letter-probability matrix: alength= 4 w= 8 nsites= 517 E= 9.1e-019 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.384913 0.615087 0.000000 MOTIF CAGCCTSG DREME-38 # Word RC Word Pos Neg P-value E-value # BEST CAGCCTSG CSAGGCTG 527 271 3.0e-020 1.3e-015 # CAGCCTGG CCAGGCTG 449 223 7.2e-019 3.1e-014 # CAGCCTCG CGAGGCTG 78 48 4.7e-003 2.0e+002 letter-probability matrix: alength= 4 w= 8 nsites= 530 E= 1.3e-015 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.147170 0.852830 0.000000 0.000000 0.000000 1.000000 0.000000 MOTIF TMTGTAA DREME-39 # Word RC Word Pos Neg P-value E-value # BEST TMTGTAA TTACAKA 1633 1169 2.8e-019 1.2e-014 # TATGTAA TTACATA 938 675 2.1e-011 9.2e-007 # TCTGTAA TTACAGA 710 498 4.5e-010 2.0e-005 letter-probability matrix: alength= 4 w= 7 nsites= 1690 E= 1.2e-014 0.000000 0.000000 0.000000 1.000000 0.572781 0.427219 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 MOTIF TGKCGTAA DREME-40 # Word RC Word Pos Neg P-value E-value # BEST TGKCGTAA TTACGMCA 194 59 2.5e-018 1.1e-013 # TGTCGTAA TTACGACA 109 24 1.9e-014 8.1e-010 # TGGCGTAA TTACGCCA 85 35 2.8e-006 1.2e-001 letter-probability matrix: alength= 4 w= 8 nsites= 196 E= 1.1e-013 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.443878 0.556122 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 MOTIF ACACACAC DREME-41 # Word RC Word Pos Neg P-value E-value # BEST ACACACAC GTGTGTGT 426 216 3.4e-017 1.5e-012 # ACACACAC GTGTGTGT 426 216 3.4e-017 1.5e-012 letter-probability matrix: alength= 4 w= 8 nsites= 572 E= 1.5e-012 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 MOTIF CCCRGRAG DREME-42 # Word RC Word Pos Neg P-value E-value # BEST CCCRGRAG CTYCYGGG 689 416 6.5e-017 2.8e-012 # CCCAGGAG CTCCTGGG 264 148 5.5e-009 2.4e-004 # CCCGGAAG CTTCCGGG 110 42 1.6e-008 6.9e-004 # CCCAGAAG CTTCTGGG 251 189 1.8e-003 7.6e+001 # CCCGGGAG CTCCCGGG 68 38 2.3e-003 1.0e+002 letter-probability matrix: alength= 4 w= 8 nsites= 697 E= 2.8e-012 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.740316 0.000000 0.259684 0.000000 0.000000 0.000000 1.000000 0.000000 0.522238 0.000000 0.477762 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 MOTIF ACAGAG DREME-43 # Word RC Word Pos Neg P-value E-value # BEST ACAGAG CTCTGT 3130 2556 2.1e-015 9.1e-011 # ACAGAG CTCTGT 3130 2556 2.1e-015 9.1e-011 letter-probability matrix: alength= 4 w= 6 nsites= 3235 E= 9.1e-011 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 MOTIF AGCCRAGA DREME-44 # Word RC Word Pos Neg P-value E-value # BEST AGCCRAGA TCTYGGCT 491 273 1.0e-015 4.5e-011 # AGCCGAGA TCTCGGCT 150 45 1.0e-014 4.4e-010 # AGCCAAGA TCTTGGCT 342 228 9.6e-007 4.1e-002 letter-probability matrix: alength= 4 w= 8 nsites= 495 E= 4.5e-011 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.694949 0.000000 0.305051 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 MOTIF AYTACAGG DREME-45 # Word RC Word Pos Neg P-value E-value # BEST AYTACAGG CCTGTART 355 176 2.6e-015 1.1e-010 # ACTACAGG CCTGTAGT 200 88 1.6e-011 7.0e-007 # ATTACAGG CCTGTAAT 155 88 1.0e-005 4.3e-001 letter-probability matrix: alength= 4 w= 8 nsites= 355 E= 1.1e-010 1.000000 0.000000 0.000000 0.000000 0.000000 0.563380 0.000000 0.436620 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 MOTIF CCTCWGCC DREME-46 # Word RC Word Pos Neg P-value E-value # BEST CCTCWGCC GGCWGAGG 632 385 3.2e-015 1.4e-010 # CCTCTGCC GGCAGAGG 329 200 1.0e-008 4.4e-004 # CCTCAGCC GGCTGAGG 308 186 2.1e-008 8.9e-004 letter-probability matrix: alength= 4 w= 8 nsites= 638 E= 1.4e-010 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.482759 0.000000 0.000000 0.517241 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 MOTIF CCACTAGR DREME-47 # Word RC Word Pos Neg P-value E-value # BEST CCACTAGR YCTAGTGG 331 166 4.9e-014 2.1e-009 # CCACTAGA TCTAGTGG 173 83 9.2e-009 4.0e-004 # CCACTAGG CCTAGTGG 159 83 5.7e-007 2.5e-002 letter-probability matrix: alength= 4 w= 8 nsites= 332 E= 2.1e-009 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.521084 0.000000 0.478916 0.000000 MOTIF TGTGGYAA DREME-48 # Word RC Word Pos Neg P-value E-value # BEST TGTGGYAA TTRCCACA 728 473 6.6e-014 2.8e-009 # TGTGGCAA TTGCCACA 484 306 1.1e-010 4.6e-006 # TGTGGTAA TTACCACA 246 168 7.1e-005 3.1e+000 letter-probability matrix: alength= 4 w= 8 nsites= 736 E= 2.8e-009 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.664402 0.000000 0.335598 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 MOTIF CCCGCCYC DREME-49 # Word RC Word Pos Neg P-value E-value # BEST CCCGCCYC GRGGCGGG 206 85 4.3e-013 1.9e-008 # CCCGCCTC GAGGCGGG 97 38 1.9e-007 8.4e-003 # CCCGCCCC GGGGCGGG 109 47 3.7e-007 1.6e-002 letter-probability matrix: alength= 4 w= 8 nsites= 208 E= 1.9e-008 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.533654 0.000000 0.466346 0.000000 1.000000 0.000000 0.000000 MOTIF ASGTCAC DREME-50 # Word RC Word Pos Neg P-value E-value # BEST ASGTCAC GTGACST 753 502 5.1e-013 2.2e-008 # AGGTCAC GTGACCT 571 404 4.2e-008 1.8e-003 # ACGTCAC GTGACGT 182 100 5.8e-007 2.5e-002 letter-probability matrix: alength= 4 w= 7 nsites= 760 E= 2.2e-008 1.000000 0.000000 0.000000 0.000000 0.000000 0.240789 0.759211 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 MOTIF GTGGTTTY DREME-51 # Word RC Word Pos Neg P-value E-value # BEST GTGGTTTY RAAACCAC 488 292 9.1e-013 3.9e-008 # GTGGTTTT AAAACCAC 303 181 1.5e-008 6.4e-004 # GTGGTTTC GAAACCAC 185 111 9.7e-006 4.2e-001 letter-probability matrix: alength= 4 w= 8 nsites= 490 E= 3.9e-008 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.381633 0.000000 0.618367 MOTIF TCACTGCA DREME-52 # Word RC Word Pos Neg P-value E-value # BEST TCACTGCA TGCAGTGA 442 263 6.7e-012 2.9e-007 # TCACTGCA TGCAGTGA 442 263 6.7e-012 2.9e-007 letter-probability matrix: alength= 4 w= 8 nsites= 443 E= 2.9e-007 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 MOTIF GATGAWAA DREME-53 # Word RC Word Pos Neg P-value E-value # BEST GATGAWAA TTWTCATC 490 301 7.7e-012 3.3e-007 # GATGAAAA TTTTCATC 317 173 3.4e-011 1.5e-006 # GATGATAA TTATCATC 173 129 6.5e-003 2.8e+002 letter-probability matrix: alength= 4 w= 8 nsites= 490 E= 3.3e-007 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.646939 0.000000 0.000000 0.353061 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 MOTIF CGATTCTC DREME-54 # Word RC Word Pos Neg P-value E-value # BEST CGATTCTC GAGAATCG 121 38 1.3e-011 5.7e-007 # CGATTCTC GAGAATCG 121 38 1.3e-011 5.7e-007 letter-probability matrix: alength= 4 w= 8 nsites= 121 E= 5.7e-007 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 MOTIF CATTTCTM DREME-55 # Word RC Word Pos Neg P-value E-value # BEST CATTTCTM KAGAAATG 550 356 5.0e-011 2.1e-006 # CATTTCTC GAGAAATG 310 203 1.2e-006 5.4e-002 # CATTTCTA TAGAAATG 241 153 5.2e-006 2.2e-001 letter-probability matrix: alength= 4 w= 8 nsites= 552 E= 2.1e-006 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.436594 0.563406 0.000000 0.000000 MOTIF ACWGAAAC DREME-56 # Word RC Word Pos Neg P-value E-value # BEST ACWGAAAC GTTTCWGT 532 343 7.3e-011 3.1e-006 # ACAGAAAC GTTTCTGT 280 171 1.5e-007 6.5e-003 # ACTGAAAC GTTTCAGT 254 173 5.0e-005 2.2e+000 letter-probability matrix: alength= 4 w= 8 nsites= 534 E= 3.1e-006 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.524345 0.000000 0.000000 0.475655 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 MOTIF CTTTAAAA DREME-57 # Word RC Word Pos Neg P-value E-value # BEST CTTTAAAA TTTTAAAG 357 206 9.0e-011 3.9e-006 # CTTTAAAA TTTTAAAG 357 206 9.0e-011 3.9e-006 letter-probability matrix: alength= 4 w= 8 nsites= 360 E= 3.9e-006 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 MOTIF CCCAGSCY DREME-58 # Word RC Word Pos Neg P-value E-value # BEST CCCAGSCY RGSCTGGG 912 642 2.6e-012 1.1e-007 # CCCAGGCT AGCCTGGG 211 124 1.1e-006 4.8e-002 # CCCAGCCC GGGCTGGG 275 200 3.2e-004 1.4e+001 # CCCAGGCC GGCCTGGG 219 160 1.4e-003 6.0e+001 # CCCAGCCT AGGCTGGG 223 164 1.5e-003 6.6e+001 letter-probability matrix: alength= 4 w= 8 nsites= 938 E= 1.1e-007 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.539446 0.460554 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.535181 0.000000 0.464819 MOTIF KAAAATR DREME-59 # Word RC Word Pos Neg P-value E-value # BEST KAAAATR YATTTTM 3035 2536 2.9e-012 1.2e-007 # TAAAATG CATTTTA 829 651 1.7e-006 7.4e-002 # GAAAATA TATTTTC 728 606 4.2e-004 1.8e+001 # TAAAATA TATTTTA 605 499 7.3e-004 3.2e+001 # GAAAATG CATTTTC 968 843 1.6e-003 7.0e+001 letter-probability matrix: alength= 4 w= 7 nsites= 3166 E= 1.2e-007 0.000000 0.000000 0.541693 0.458307 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.425774 0.000000 0.574226 0.000000 MOTIF GAGRGAGA DREME-60 # Word RC Word Pos Neg P-value E-value # BEST GAGRGAGA TCTCYCTC 552 372 1.5e-009 6.3e-005 # GAGAGAGA TCTCTCTC 331 217 5.9e-007 2.6e-002 # GAGGGAGA TCTCCCTC 230 158 1.5e-004 6.3e+000 letter-probability matrix: alength= 4 w= 8 nsites= 583 E= 6.3e-005 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.608919 0.000000 0.391081 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 MOTIF CTSTAGCC DREME-61 # Word RC Word Pos Neg P-value E-value # BEST CTSTAGCC GGCTASAG 300 177 9.0e-009 3.9e-004 # CTGTAGCC GGCTACAG 151 85 1.0e-005 4.4e-001 # CTCTAGCC GGCTAGAG 150 92 1.1e-004 4.9e+000 letter-probability matrix: alength= 4 w= 8 nsites= 302 E= 3.9e-004 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.496689 0.503311 0.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 MOTIF CACWGTGA DREME-62 # Word RC Word Pos Neg P-value E-value # BEST CACWGTGA TCACWGTG 475 318 1.2e-008 5.1e-004 # CACAGTGA TCACTGTG 267 179 1.7e-005 7.4e-001 # CACTGTGA TCACAGTG 270 185 3.8e-005 1.6e+000 letter-probability matrix: alength= 4 w= 8 nsites= 478 E= 5.1e-004 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.502092 0.000000 0.000000 0.497908 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 MOTIF CCGGAAGY DREME-63 # Word RC Word Pos Neg P-value E-value # BEST CCGGAAGY RCTTCCGG 169 81 1.3e-008 5.6e-004 # CCGGAAGT ACTTCCGG 84 33 1.3e-006 5.7e-002 # CCGGAAGC GCTTCCGG 90 48 2.2e-004 9.4e+000 letter-probability matrix: alength= 4 w= 8 nsites= 175 E= 5.6e-004 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.514286 0.000000 0.485714 MOTIF RTTAAGTA DREME-64 # Word RC Word Pos Neg P-value E-value # BEST RTTAAGTA TACTTAAY 386 247 1.6e-008 7.1e-004 # GTTAAGTA TACTTAAC 163 91 3.6e-006 1.5e-001 # ATTAAGTA TACTTAAT 223 157 4.1e-004 1.7e+001 letter-probability matrix: alength= 4 w= 8 nsites= 388 E= 7.1e-004 0.574742 0.000000 0.425258 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 MOTIF CGCCSGCC DREME-65 # Word RC Word Pos Neg P-value E-value # BEST CGCCSGCC GGCSGGCG 178 89 2.6e-008 1.1e-003 # CGCCCGCC GGCGGGCG 99 44 2.4e-006 1.0e-001 # CGCCGGCC GGCCGGCG 84 48 1.1e-003 4.7e+001 letter-probability matrix: alength= 4 w= 8 nsites= 182 E= 1.1e-003 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.538462 0.461538 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 MOTIF AGTRTACA DREME-66 # Word RC Word Pos Neg P-value E-value # BEST AGTRTACA TGTAYACT 369 236 3.2e-008 1.4e-003 # AGTGTACA TGTACACT 190 101 9.7e-008 4.2e-003 # AGTATACA TGTATACT 180 135 6.4e-003 2.8e+002 letter-probability matrix: alength= 4 w= 8 nsites= 372 E= 1.4e-003 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.489247 0.000000 0.510753 0.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 MOTIF CTRTCACC DREME-67 # Word RC Word Pos Neg P-value E-value # BEST CTRTCACC GGTGAYAG 292 177 5.7e-008 2.5e-003 # CTATCACC GGTGATAG 135 75 2.0e-005 8.8e-001 # CTGTCACC GGTGACAG 157 102 3.7e-004 1.6e+001 letter-probability matrix: alength= 4 w= 8 nsites= 293 E= 2.5e-003 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.460751 0.000000 0.539249 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 MOTIF RTGACACA DREME-68 # Word RC Word Pos Neg P-value E-value # BEST RTGACACA TGTGTCAY 602 432 5.9e-008 2.5e-003 # ATGACACA TGTGTCAT 365 254 4.3e-006 1.9e-001 # GTGACACA TGTGTCAC 237 180 3.0e-003 1.3e+002 letter-probability matrix: alength= 4 w= 8 nsites= 607 E= 2.5e-003 0.602965 0.000000 0.397035 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 MOTIF CACGTR DREME-69 # Word RC Word Pos Neg P-value E-value # BEST CACGTR YACGTG 800 607 1.2e-007 5.2e-003 # CACGTG CACGTG 358 245 2.2e-006 9.6e-002 # CACGTA TACGTG 451 365 1.4e-003 6.0e+001 letter-probability matrix: alength= 4 w= 6 nsites= 822 E= 5.2e-003 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.558394 0.000000 0.441606 0.000000 MOTIF ATTACCTM DREME-70 # Word RC Word Pos Neg P-value E-value # BEST ATTACCTM KAGGTAAT 249 146 1.2e-007 5.0e-003 # ATTACCTA TAGGTAAT 127 73 8.1e-005 3.5e+000 # ATTACCTC GAGGTAAT 122 73 2.7e-004 1.2e+001 letter-probability matrix: alength= 4 w= 8 nsites= 251 E= 5.0e-003 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.505976 0.494024 0.000000 0.000000 MOTIF CGYCACCA DREME-71 # Word RC Word Pos Neg P-value E-value # BEST CGYCACCA TGGTGRCG 137 67 5.2e-007 2.3e-002 # CGCCACCA TGGTGGCG 96 47 2.5e-005 1.1e+000 # CGTCACCA TGGTGACG 41 21 7.6e-003 3.2e+002 letter-probability matrix: alength= 4 w= 8 nsites= 137 E= 2.3e-002 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.700730 0.000000 0.299270 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 MOTIF TGACGMCA DREME-72 # Word RC Word Pos Neg P-value E-value # BEST TGACGMCA TGKCGTCA 172 92 4.7e-007 2.0e-002 # TGACGACA TGTCGTCA 92 49 1.8e-004 7.8e+000 # TGACGCCA TGGCGTCA 80 43 5.4e-004 2.3e+001 letter-probability matrix: alength= 4 w= 8 nsites= 173 E= 2.0e-002 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.531792 0.468208 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 MOTIF TATAGTCA DREME-73 # Word RC Word Pos Neg P-value E-value # BEST TATAGTCA TGACTATA 173 95 1.1e-006 4.5e-002 # TATAGTCA TGACTATA 173 95 1.1e-006 4.5e-002 letter-probability matrix: alength= 4 w= 8 nsites= 175 E= 4.5e-002 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 # Stopping reason: E-value threshold exceeded # Running time: 19688.51 seconds