Index of /kundaje/dskim89/public/2016-03-10_encode_dnase

[ICO]NameLast modifiedSizeDescription
[PARENTDIR]Parent Directory  -  
[ ]test.json2016-03-10 17:32 4.0K 
[TXT]make_json.sh2016-03-10 17:30 700  
[ ]check_dnase_run.json2016-03-11 18:45 21K 
[ ]E206.Fetal_Spinal_Cord.ENCODE.UW_Stam.DNase-seq.d072-d072.36bp.filt.50m.tagAlign.pf.fc.signal.bigwig2016-03-11 18:43 554M 
[ ]E206.Fetal_Spinal_Cord.ENCODE.UW_Stam.DNase-seq.d059-d059.36bp.filt.50m.tagAlign.pf.fc.signal.bigwig2016-03-11 18:44 679M 
[ ]E202.Brain_Medulla_Oblongata.ENCODE.UW_Stam.DNase-seq.b1.36bp.filt.50m.tagAlign.pf.fc.signal.bigwig2016-03-11 18:42 723M 
[ ]E201.Brain_Midbrain.ENCODE.UW_Stam.DNase-seq.b1.36bp.filt.50m.tagAlign.pf.fc.signal.bigwig2016-03-11 18:43 727M 
[ ]E196.Brain_Cerebellar_Astrocyte_Primary_Cells.ENCODE.UW_Stam.DNase-seq.merged.36bp.filt.50m.tagAlign.pf.fc.signal.bigwig2016-03-11 18:42 741M 
[ ]E191.Brain_Globus_Pallidus.ENCODE.UW_Stam.DNase-seq.b1.36bp.filt.50m.tagAlign.pf.fc.signal.bigwig2016-03-11 18:44 683M 
[ ]E190.Brain_Middle_Frontal_Gyrus.ENCODE.UW_Stam.DNase-seq.b1.36bp.filt.50m.tagAlign.pf.fc.signal.bigwig2016-03-11 18:44 651M 
[ ]E189.Brain_Hippocampus_Astrocyte_Primary_Cells.ENCODE.UW_Stam.DNase-seq.b1.36bp.filt.50m.tagAlign.pf.fc.signal.bigwig2016-03-11 18:43 657M 
[ ]E185.Iris_Pigment_Epithelial_Primary_Cells.ENCODE.UW_Stam.DNase-seq.b1.36bp.filt.50m.tagAlign.pf.fc.signal.bigwig2016-03-11 18:43 630M 
[ ]E183.Camera-type_Eye.ENCODE.UW_Stam.b1.36bp.filt.50m.tagAlign.pf.fc.signal.bigwig2016-03-11 18:42 699M 
[ ]E181.Amniotic_Epithelial_Primary_Cells.ENCODE.UW_Stam.DNase-seq.b1.36bp.filt.50m.tagAlign.pf.fc.signal.bigwig2016-03-11 18:43 757M 
[ ]E180.Prostate_Epithelial_Primary_Cells.ENCODE.UW_Stam.DNase-seq.merged.36bp.filt.50m.tagAlign.pf.fc.signal.bigwig2016-03-11 18:42 726M 
[ ]E178.Kidney_Cortical_Epithelial_Primary_Cells.ENCODE.UW_Stam.DNase-seq.b1.36bp.filt.50m.tagAlign.pf.fc.signal.bigwig2016-03-11 18:44 743M 
[ ]E176.Kidney_Proximal_Tube_Epithelial_Primary_Cells.ENCODE.UW_Stam.DNase-seq.merged.36bp.filt.50m.tagAlign.pf.fc.signal.bigwig2016-03-11 18:42 566M 
[ ]E175.Choroid_Plexus_Epithelial_Primary_Cells.ENCODE.UW_Stam.DNase-seq.b1.36bp.filt.50m.tagAlign.pf.fc.signal.bigwig2016-03-11 18:43 766M 
[ ]E174.Esophagus_Epithelial_Primary_Cells.ENCODE.UW_Stam.DNase-seq.b1.36bp.filt.50m.tagAlign.pf.fc.signal.bigwig2016-03-11 18:43 622M 
[ ]E172.Bronchial_Epithelial_Primary_Cells.ENCODE.UW_Stam.DNase-seq.b1.36bp.filt.50m.tagAlign.pf.fc.signal.bigwig2016-03-11 18:43 746M 
[ ]E158.Conjunctiva_Fibroblast_Primary_Cells.ENCODE.UW_Stam.DNase-seq.merged.36bp.filt.50m.tagAlign.pf.fc.signal.bigwig2016-03-11 18:43 730M 
[ ]E157.Fibroblast_of_Villous_Mesenchyme.ENCODE.UW_Stam.DNase-seq.b1.36bp.filt.50m.tagAlign.pf.fc.signal.bigwig2016-03-11 18:42 605M 
[ ]E156.Fibroblast_of_the_Aortic_Adventitia.ENCODE.UW_Stam.DNase-seq.b2.36bp.filt.50m.tagAlign.pf.fc.signal.bigwig2016-03-11 18:43 773M 
[ ]E155.Peridontal_Ligament_Fibroblast_Primary_Cells.ENCODE.UW_Stam.DNase-seq.b1.36bp.filt.50m.tagAlign.pf.fc.signal.bigwig2016-03-11 18:43 769M 
[ ]E150.Cardiac_Fibroblast_Primary_Cells.ENCODE.UW_Stam.DNase-seq.b1.36bp.filt.50m.tagAlign.pf.fc.signal.bigwig2016-03-11 18:43 552M 
[ ]E149.Pulmonary_Artery_Fibroblast_Primary_Cells.ENCODE.UW_Stam.DNase-seq.b1.36bp.filt.50m.tagAlign.pf.fc.signal.bigwig2016-03-11 18:43 795M 
[ ]E147.Mammary_Gland_Fibroblast_Primary_Cells.ENCODE.UW_Stam.DNase-seq.b2.36bp.filt.50m.tagAlign.pf.fc.signal.bigwig2016-03-11 18:42 745M 
[ ]E140.Arm_Fibroblast_Primary_Cells.ENCODE.UW_Stam.DNase-seq.b2.36bp.filt.50m.tagAlign.pf.fc.signal.bigwig2016-03-11 18:42 541M 
[ ]E140.Arm_Fibroblast_Primary_Cells.ENCODE.UW_Stam.DNase-seq.b1.36bp.filt.50m.tagAlign.pf.fc.signal.bigwig2016-03-11 18:42 539M 
[ ]E138.Bone_Marrow_Stromal_Primary_Cells.ENCODE.UW_Stam.DNase-seq.merged.36bp.filt.50m.tagAlign.pf.fc.signal.bigwig2016-03-11 18:42 560M 
[ ]E135.Primary_CD20+_B_cells_from_peripheral_blood.ENCODE.UW_Stam.DNase-seq.b1.36bp.filt.50m.tagAlign.pf.fc.signal.bigwig2016-03-11 18:44 605M 
[ ]E133.H7_Derived_Cardiac_Mesoderm_Cultured_Cells.ENCODE.UW_Stam.DNase-seq.d14.36bp.filt.50m.tagAlign.pf.fc.signal.bigwig2016-03-11 18:44 557M 
[ ]E133.H7_Derived_Cardiac_Mesoderm_Cultured_Cells.ENCODE.UW_Stam.DNase-seq.d09.36bp.filt.50m.tagAlign.pf.fc.signal.bigwig2016-03-11 18:43 666M 
[ ]E133.H7_Derived_Cardiac_Mesoderm_Cultured_Cells.ENCODE.UW_Stam.DNase-seq.d05.36bp.filt.50m.tagAlign.pf.fc.signal.bigwig2016-03-11 18:44 714M 
[ ]E131.H9_Derived_Liver_Cultured_Cells.ENCODE.UW_Stam.DNase-seq.b2.36bp.filt.50m.tagAlign.pf.fc.signal.bigwig2016-03-11 18:42 627M 
[ ]E131.H9_Derived_Liver_Cultured_Cells.ENCODE.UW_Stam.DNase-seq.b1.36bp.filt.50m.tagAlign.pf.fc.signal.bigwig2016-03-11 18:42 728M 
[ ]E128.NHLF_Lung_Fibroblast_Primary_Cells.ENCODE.UW_Stam.DNase-seq.b2.36bp.filt.50m.tagAlign.pf.fc.signal.bigwig2016-03-11 18:44 722M 
[ ]E128.NHLF_Lung_Fibroblast_Primary_Cells.ENCODE.UW_Stam.DNase-seq.b1.36bp.filt.50m.tagAlign.pf.fc.signal.bigwig2016-03-11 18:44 651M 
[ ]E127.NHEK-Epidermal_Keratinocyte_Primary_Cells.ENCODE.UW_Stam.merged.36bp.filt.50m.tagAlign.pf.fc.signal.bigwig2016-03-11 18:43 687M 
[ ]E126.NHDF-Ad_Adult_Dermal_Fibroblast_Primary_Cells.ENCODE.UW_Stam.DNase-seq.b1.36bp.filt.50m.tagAlign.pf.fc.signal.bigwig2016-03-11 18:42 712M 
[ ]E125.NH-A_Astrocytes_Primary_Cells.ENCODE.UW_Stam.DNase-seq.b1.36bp.filt.50m.tagAlign.pf.fc.signal.bigwig2016-03-11 18:43 723M 
[ ]E124.Monocytes-CD14+_RO01746_Primary_Cells.ENCODE.UW_Stam.DNase-seq.merged.36bp.filt.50m.tagAlign.pf.fc.signal.bigwig2016-03-11 18:42 732M 
[ ]E123.K562_Leukemia_Cells.ENCODE.UW_Stam.DNase-seq.b2.36bp.filt.50m.tagAlign.pf.fc.signal.bigwig2016-03-11 18:45 660M 
[ ]E123.K562_Leukemia_Cells.ENCODE.UW_Stam.DNase-seq.b1.36bp.filt.50m.tagAlign.pf.fc.signal.bigwig2016-03-11 18:43 658M 
[ ]E122.HUVEC_Umbilical_Vein_Endothelial_Primary_Cells.ENCODE.UW_Stam.DNase-seq.b1.36bp.filt.50m.tagAlign.pf.fc.signal.bigwig2016-03-11 18:44 654M 
[ ]E121.HSMM_cell_derived_Skeletal_Muscle_Myotubes_Cells.ENCODE.UW_Stam.DNase-seq.merged.36bp.filt.50m.tagAlign.pf.fc.signal.bigwig2016-03-11 18:44 665M 
[ ]E120.HSMM_Skeletal_Muscle_Myoblasts_Cells.ENCODE.UW_Stam.DNase-seq.merged.36bp.filt.50m.tagAlign.pf.fc.signal.bigwig2016-03-11 18:45 584M 
[ ]E119.HMEC_Mammary_Epithelial_Primary_Cells.ENCODE.UW_Stam.DNase-seq.merged.36bp.filt.50m.tagAlign.pf.fc.signal.bigwig2016-03-11 18:44 625M 
[ ]E118.HepG2_Hepatocellular_Carcinoma_Cell_Line.ENCODE.UW_Stam.DNase-seq.b2.36bp.filt.50m.tagAlign.pf.fc.signal.bigwig2016-03-11 18:42 662M 
[ ]E118.HepG2_Hepatocellular_Carcinoma_Cell_Line.ENCODE.UW_Stam.DNase-seq.b1.36bp.filt.50m.tagAlign.pf.fc.signal.bigwig2016-03-11 18:44 667M 
[ ]E117.HeLa-S3_Cervical_Carcinoma_Cell_Line.ENCODE.UW_Stam.DNase-seq.b2.36bp.filt.50m.tagAlign.pf.fc.signal.bigwig2016-03-11 18:44 540M 
[ ]E117.HeLa-S3_Cervical_Carcinoma_Cell_Line.ENCODE.UW_Stam.DNase-seq.b1.36bp.filt.50m.tagAlign.pf.fc.signal.bigwig2016-03-11 18:44 598M 
[ ]E116.GM12878_Lymphoblastoid_Cells.ENCODE.UW_Stam.DNase-seq.merged.36bp.filt.50m.tagAlign.pf.fc.signal.bigwig2016-03-11 18:44 660M 
[ ]E114.A549_EtOH_0.02pct_Lung_Carcinoma_Cell_Line.ENCODE.ENCFF000SEO.DNase-seq.merged.36bp.filt.50m.tagAlign.pf.fc.signal.bigwig2016-03-11 18:43 574M 
[ ]E088.Fetal_Lung.ENCODE.UW_Stam.DNase-seq.d054-d054.36bp.filt.50m.tagAlign.pf.fc.signal.bigwig2016-03-11 18:43 724M 
[ ]E086.Fetal_Kidney.ENCODE.UW_Stam.DNase-seq.d059-d059.36bp.filt.50m.tagAlign.pf.narrowPeak.hammock.gz2016-03-10 16:46 6.6M 
[ ]E086.Fetal_Kidney.ENCODE.UW_Stam.DNase-seq.d059-d059.36bp.filt.50m.tagAlign.pf.fc.signal.bigwig2016-03-11 18:44 640M 
[ ]E083.Fetal_Heart.ENCODE.UW_Stam.DNase-seq.d076-d076.36bp.filt.50m.tagAlign.pf.narrowPeak.hammock.gz2016-03-10 16:46 6.3M 
[ ]E083.Fetal_Heart.ENCODE.UW_Stam.DNase-seq.d076-d076.36bp.filt.50m.tagAlign.pf.fc.signal.bigwig2016-03-11 18:44 691M 
[ ]E083.Fetal_Heart.ENCODE.UW_Stam.DNase-seq.d072-d072.36bp.filt.50m.tagAlign.pf.narrowPeak.hammock.gz2016-03-10 16:46 5.8M 
[ ]E083.Fetal_Heart.ENCODE.UW_Stam.DNase-seq.d072-d072.36bp.filt.50m.tagAlign.pf.fc.signal.bigwig2016-03-11 18:44 706M 
[ ]E081.Fetal_Brain_Male.ENCODE.UW_Stam.DNase-seq.d072-d072.36bp.filt.50m.tagAlign.pf.narrowPeak.hammock.gz2016-03-10 16:46 7.2M 
[ ]E081.Fetal_Brain_Male.ENCODE.UW_Stam.DNase-seq.d072-d072.36bp.filt.50m.tagAlign.pf.fc.signal.bigwig2016-03-11 18:43 623M 
[ ]E081.Fetal_Brain_Male.ENCODE.UW_Stam.DNase-seq.d058-d058.36bp.filt.50m.tagAlign.pf.narrowPeak.hammock.gz2016-03-10 16:46 6.0M 
[ ]E081.Fetal_Brain_Male.ENCODE.UW_Stam.DNase-seq.d058-d058.36bp.filt.50m.tagAlign.pf.fc.signal.bigwig2016-03-11 18:42 613M 
[ ]E081.Fetal_Brain_Male.ENCODE.UW_Stam.DNase-seq.d056-d056.36bp.filt.50m.tagAlign.pf.narrowPeak.hammock.gz2016-03-10 16:46 6.0M 
[ ]E081.Fetal_Brain_Male.ENCODE.UW_Stam.DNase-seq.d056-d056.36bp.filt.50m.tagAlign.pf.fc.signal.bigwig2016-03-11 18:43 570M 
[ ]E063.Adipose_Nuclei.ENCODE.UW_Stam.DNase-seq.b2.36bp.filt.50m.tagAlign.pf.narrowPeak.hammock.gz2016-03-10 16:46 6.4M 
[ ]E063.Adipose_Nuclei.ENCODE.UW_Stam.DNase-seq.b2.36bp.filt.50m.tagAlign.pf.fc.signal.bigwig2016-03-11 18:43 578M 
[ ]E063.Adipose_Nuclei.ENCODE.UW_Stam.DNase-seq.b1.36bp.filt.50m.tagAlign.pf.narrowPeak.hammock.gz2016-03-10 16:46 6.1M 
[ ]E063.Adipose_Nuclei.ENCODE.UW_Stam.DNase-seq.b1.36bp.filt.50m.tagAlign.pf.fc.signal.bigwig2016-03-11 18:43 643M 
[ ]E044.Primary_T_regulatory_cells_from_peripheral_blood.ENCODE.UW_Stam.DNase-seq.b1.36bp.filt.50m.tagAlign.pf.narrowPeak.hammock.gz.tbi2016-03-10 17:41 604K 
[ ]E044.Primary_T_regulatory_cells_from_peripheral_blood.ENCODE.UW_Stam.DNase-seq.b1.36bp.filt.50m.tagAlign.pf.narrowPeak.hammock.gz2016-03-10 17:41 3.8M 
[ ]E044.Primary_T_regulatory_cells_from_peripheral_blood.ENCODE.UW_Stam.DNase-seq.b1.36bp.filt.50m.tagAlign.pf.fc.signal.bigwig2016-03-11 18:44 725M 
[ ]E042.Primary_T_helper_17_cells_PMA-I_stimulated.ENCODE.UW_Stam.DNase-seq.b1.36bp.filt.50m.tagAlign.pf.narrowPeak.hammock.gz2016-03-10 16:46 4.2M 
[ ]E042.Primary_T_helper_17_cells_PMA-I_stimulated.ENCODE.UW_Stam.DNase-seq.b1.36bp.filt.50m.tagAlign.pf.fc.signal.bigwig2016-03-11 18:44 579M 
[ ]E040.Primary_T_helper_1_memory_cells_from_peripheral_blood.ENCODE.UW_Stam.DNase-seq.b1.36bp.filt.50m.tagAlign.pf.narrowPeak.hammock.gz2016-03-10 16:46 3.4M 
[ ]E040.Primary_T_helper_1_memory_cells_from_peripheral_blood.ENCODE.UW_Stam.DNase-seq.b1.36bp.filt.50m.tagAlign.pf.fc.signal.bigwig2016-03-11 18:44 698M 
[ ]E037.Primary_T_helper_2_memory_cells_from_peripheral_blood.ENCODE.UW_Stam.DNase-seq.b2.36bp.filt.50m.tagAlign.pf.narrowPeak.hammock.gz2016-03-10 16:46 3.6M 
[ ]E037.Primary_T_helper_2_memory_cells_from_peripheral_blood.ENCODE.UW_Stam.DNase-seq.b2.36bp.filt.50m.tagAlign.pf.fc.signal.bigwig2016-03-11 18:44 712M 
[ ]E037.Primary_T_helper_2_memory_cells_from_peripheral_blood.ENCODE.UW_Stam.DNase-seq.b1.36bp.filt.50m.tagAlign.pf.narrowPeak.hammock.gz2016-03-10 16:46 3.6M 
[ ]E037.Primary_T_helper_2_memory_cells_from_peripheral_blood.ENCODE.UW_Stam.DNase-seq.b1.36bp.filt.50m.tagAlign.pf.fc.signal.bigwig2016-03-11 18:44 637M 
[ ]E035.Primary_hematopoietic_stem_cells.ENCODE.UW_Stam.DNase-seq.b2.36bp.filt.50m.tagAlign.pf.narrowPeak.hammock.gz2016-03-10 16:46 2.3M 
[ ]E035.Primary_hematopoietic_stem_cells.ENCODE.UW_Stam.DNase-seq.b2.36bp.filt.50m.tagAlign.pf.fc.signal.bigwig2016-03-11 18:44 598M 
[ ]E035.Primary_hematopoietic_stem_cells.ENCODE.UW_Stam.DNase-seq.b1.36bp.filt.50m.tagAlign.pf.narrowPeak.hammock.gz2016-03-10 16:46 2.4M 
[ ]E035.Primary_hematopoietic_stem_cells.ENCODE.UW_Stam.DNase-seq.b1.36bp.filt.50m.tagAlign.pf.fc.signal.bigwig2016-03-11 18:43 631M 
[ ]E009.H9_Derived_Neuronal_Progenitor_Cultured_Cells.ENCODE.UW_Stam.DNase-seq.b1.36bp.filt.50m.tagAlign.pf.narrowPeak.hammock.gz2016-03-10 16:46 5.3M 
[ ]E009.H9_Derived_Neuronal_Progenitor_Cultured_Cells.ENCODE.UW_Stam.DNase-seq.b1.36bp.filt.50m.tagAlign.pf.fc.signal.bigwig2016-03-11 18:44 667M 
[ ]E002.ES-WA7_Cells.ENCODE.UW_Stam.DNase-seq.b1.36bp.filt.50m.tagAlign.pf.narrowPeak.hammock.gz2016-03-10 16:46 10M 
[ ]E002.ES-WA7_Cells.ENCODE.UW_Stam.DNase-seq.b1.36bp.filt.50m.tagAlign.pf.fc.signal.bigwig2016-03-11 18:43 763M 
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