idx pattern logo
pwm		 logo
imp		 n
seqlets		 Nanog
pos
meandiff		 Nanog
pos
std		 Nanog
pos
unimodal		 Oct4
pos
meandiff		 Oct4
pos
std		 Oct4
pos
unimodal		 Sox2
pos
meandiff		 Sox2
pos
std		 Sox2
pos
unimodal		 consensus Oct4
region
counts		 Oct4
footprint
counts		 Oct4
footprint
max		 Oct4
footprint
strandcor		 Klf4
periodicity
10bp		 Sall4
periodicity
10bp		 Oct4
periodicity
10bp		 Sox2
periodicity
10bp		 Nanog
periodicity
10bp		 Sall4
imp
profile		 Klf4
imp
profile		 Klf4
imp
counts		 Sox2
imp
profile		 Nanog
imp
counts		 Sall4
imp
counts		 Sox2
imp
counts		 Oct4
imp
counts		 Oct4
imp
profile		 Nanog
imp
profile		 ic
pwm
mean		 Sall4
footprint
strandcor		 Sall4
footprint
counts		 Sall4
footprint
max		 Sall4
region
counts		 Sall4
footprint
entropydiff		 Klf4
footprint
entropydiff		 Oct4
footprint
entropydiff		 Sox2
footprint
entropydiff		 Sox2
footprint
strandcor		 Sox2
footprint
max		 Klf4
footprint
strandcor		 Nanog
footprint
strandcor		 Nanog
footprint
entropydiff		 Nanog
footprint
max		 Nanog
footprint
counts		 Sox2
footprint
counts		 Sox2
region
counts		 Nanog
region
counts		 Klf4
region
counts		 Klf4
footprint
counts		 Klf4
footprint
max
13 m0_p13 109 nan nan nan 2.1 155 True 1.77 175 True CCCCCGGGGGCGGGCCCCCGAACTCTCGCGAGAACTGGGCGCGGGGGCCCGGGCGGCGG 418 119 0.745 0.00506 0.00518 0.00706 0.00922 0.00811 0.00729 0.0107 0.00805 0.00786 0.00482 0.00969 0.00749 0.00717 0.00943 0.00746 0.0135 0.352 0.0102 1.47e+03 44 2.63e+03 0.508 0.128 0.0773 0.163 0.00498 0.189 0.00541 0.00744 0.369 1.77 88.5 30.5 142 219 380 135 1.66
12 m0_p12 124 2.01 53.2 True 2 70.9 True 1.97 41.6 True AAAGTAGTTAAGGAACAAACAAAGCATAAACAAAGGTCCCTTGATTACTGTATTCAGGGTCTTAACAAG 936 448 2.75 0.00503 0.000389 6.05e-05 0.00022 0.00229 0.00296 0.00245 0.00262 0.00528 0.00578 0.0106 0.006 0.00647 0.00719 0.00343 0.0192 0.389 0.00502 268 2.02 796 0.148 0.258 0.141 0.426 0.00629 6.31 0.00542 0.00913 0.824 51.9 2.13e+03 434 695 2.96e+03 517 241 2.34
19 m0_p19 92 2.01 24.2 False 2.02 54.3 True 2.04 52.1 True CCATGATTACTGTATTCAGGGTCTTAACAAGACCCATCAACAATCAAAGAACACATTCTCCAGCTGTATT 619 283 2.57 0.00522 0.00103 0.00108 0.00641 0.00767 0.0113 0.00258 0.00237 0.00477 0.0051 0.0104 0.00577 0.00632 0.00691 0.00327 0.023 0.358 0.00525 260 2.08 731 0.166 0.227 0.214 0.49 0.00653 5.8 0.00556 0.00993 0.928 55.1 2.11e+03 372 582 2.71e+03 443 225 1.78
2 m0_p2 2105 1.97 80.5 True 1.99 71.9 True 1.98 95.6 True ATTTGCATATGAAT 722 337 1.87 0.00523 0.0133 0.0417 0.0416 0.0264 0.022 0.00576 0.00339 0.0098 0.0144 0.0245 0.0145 0.0168 0.0236 0.0214 0.0171 0.932 0.00503 155 0.578 506 0.0139 0.0313 0.0604 0.0424 0.00508 0.618 0.00508 0.00512 0.0387 1.28 301 98.9 252 596 271 105 0.417
10 m0_p10 223 1.95 67.6 True 1.96 66.7 False 1.95 85.3 False ACAGGAAATG 763 330 1.6 0.00499 0.00773 0.00799 0.00501 0.00784 0.0235 0.00609 0.0115 0.0115 0.00986 0.0193 0.0111 0.0113 0.0133 0.0087 0.0292 1.05 0.00499 205 0.957 656 0.0463 0.0541 0.0379 0.0638 0.00504 0.677 0.005 0.00503 0.113 5.04 752 148 354 1.31e+03 443 175 0.695
6 m0_p6 407 2 37.5 True 1.96 71.8 True 1.95 76.3 True TTAATGGCTC 643 302 1.35 0.00503 0.0092 0.00924 0.0119 0.0125 0.0202 0.00366 0.00458 0.00721 0.0102 0.0193 0.00902 0.0103 0.0111 0.00577 0.0369 0.718 0.00501 189 0.835 562 0.0324 0.0764 0.0325 0.0643 0.00515 0.624 0.00524 0.0062 0.27 6.23 998 145 311 1.44e+03 360 170 0.817
20 m0_p20 85 1.98 83.3 True 2.04 91.1 True 2 98.6 True TCAAGGTCAGGCAGATTCCTGAGTTCAAGGTCAGCCTAGGACAGAGCGAGATTAGGCCAAGGTGTGGTA 838 370 2.48 0.00487 0.00292 0.00179 0.000973 0.00229 0.00416 0.00276 0.00402 0.00652 0.0046 0.00953 0.00644 0.00641 0.00757 0.00371 0.0101 0.329 0.00503 304 1.54 918 0.0826 0.168 0.147 0.249 0.0051 1.45 0.00506 0.00547 0.29 4.63 554 183 375 1.05e+03 533 249 1.81
14 m0_p14 106 2.25 49.4 True 2.15 60.6 True 2.2 64 False ACATGCACATCATAGGGTTTAGTCGAAGTGAGTTACAAAGGAATAAAAAGCTATCATTAGGGTTTTCCA 689 311 1.54 0.00499 0.00171 0.00136 0.00317 0.00476 0.00501 0.00227 0.00242 0.0052 0.00407 0.00842 0.00576 0.00597 0.0072 0.00409 0.00782 0.0562 0.00489 211 1.15 662 0.109 0.177 0.101 0.204 0.00504 1.17 0.00473 0.00531 0.348 6.53 684 173 399 1.31e+03 409 174 1.14
22 m0_p22 75 1.91 71.4 True 2.06 64.1 True 2.04 48.2 False CCAGAACAAAGGCAACTTATGAAGGCAATAGGTAGCAAAGAAAAGT 605 287 1.66 0.0051 0.00242 0.00381 0.00964 0.0105 0.00336 0.00253 0.00249 0.00584 0.006 0.011 0.00663 0.00715 0.00845 0.00472 0.011 0.279 0.0051 209 1.01 601 0.103 0.148 0.113 0.269 0.00553 1.25 0.00505 0.00519 0.181 2.92 391 141 287 703 321 148 0.907
16 m0_p16 107 1.75 73.9 True 1.96 81 False 1.95 83.1 False GGAGATTCCCGAGTTCAAGGTCAGCCTAGGCT 686 284 1.51 0.005 0.00139 0.00226 0.00527 0.00549 0.00528 0.00301 0.00579 0.00684 0.00308 0.00806 0.0059 0.00552 0.00629 0.00261 0.00973 0.579 0.00503 221 1.36 653 0.081 0.145 0.0711 0.171 0.0049 0.752 0.00522 0.00503 0.259 4.6 458 110 289 935 404 188 1.13
3 m0_p3 1384 1.94 69.3 True 1.95 71.6 False 1.97 75.6 False AAGACACTGCTACCTGCTGAGAG 639 291 1.57 0.00502 0.00562 0.00265 0.00363 0.00578 0.00596 0.0042 0.00786 0.00798 0.00492 0.0104 0.00698 0.00674 0.00774 0.00411 0.0146 0.61 0.00503 202 1.14 592 0.0391 0.152 0.0506 0.164 0.00499 1.14 0.0052 0.00522 0.134 2.89 530 139 301 887 435 231 1.59
1 m0_p1 3927 2.03 79.1 True 2.03 116 True 2.03 93.5 True GAACAAAAGAGTGATTTAGGCAGAACAATAGA 630 270 1.11 0.00504 0.00395 0.00426 0.00642 0.00555 0.00863 0.003 0.00477 0.0078 0.00881 0.0139 0.00818 0.00858 0.0101 0.0047 0.0143 0.2 0.005 186 0.627 583 0.0101 0.0632 0.0212 0.145 0.00571 1.57 0.00522 0.00537 0.0934 2.23 484 168 343 851 399 191 0.844
21 m0_p21 94 2.2 134 True 2.46 106 True 2.36 76.9 True AAATCAGGCATTTACTAAGAACCCCTGGTGGTGGGCTTAACAATAGACTAGCATTACACCTGGCTCCCTT 578 177 1.22 0.00497 0.00388 0.00162 0.00311 0.00433 0.00425 0.00122 0.00144 0.00447 0.00284 0.00803 0.00515 0.00534 0.0059 0.00188 0.00521 0.832 0.0051 160 0.989 564 0.157 0.216 0.185 0.273 0.00495 1.18 0.00495 0.00497 0.184 1.82 265 111 377 873 350 137 0.957
17 m0_p17 95 2.26 47.2 True 2.2 33.3 True 2.15 56.7 True GTAGACTGCCTGCTGAGCTTGCTTTGCAACACAATCCAGCTGAAACAAAGGATGGGTCTGTGGGTTTTCC 674 321 1.95 0.00511 0.0105 0.011 0.0283 0.0194 0.0129 0.003 0.00392 0.00621 0.00536 0.0104 0.00662 0.00703 0.00843 0.00522 0.0104 0.974 0.00494 183 1.22 548 0.193 0.308 0.154 0.304 0.00544 1.62 0.00515 0.00478 0.256 4.54 361 121 272 687 284 131 0.947
5 m0_p5 421 1.96 70.7 True 2.02 68.4 True 2 55.5 True GAGGTCAGAGTCTGAGCTTGATCGTTGCTAATTTGCAACTGAATGGAGTACCTGGACTTCCCCAAAGAAG 659 348 2.96 0.00577 0.00132 0.0102 0.0257 0.013 0.00473 0.00318 0.00285 0.00595 0.00607 0.0113 0.00713 0.00772 0.00969 0.00712 0.0144 0.954 0.00504 179 1.15 536 0.177 0.221 0.297 0.374 0.0067 2.21 0.00509 0.00689 0.487 5.72 311 125 253 543 258 125 1.08
9 m0_p9 235 2.14 43 True 2.03 41.1 True 2.07 83.6 True TTGTTTGCAACCCCTCCCGGGAGAGCAGAATTAGCATCAAAATACAAACAGCACCAGGGCCATCCACAAC 624 316 3.56 0.00573 0.00439 0.0137 0.033 0.02 0.0105 0.00336 0.00361 0.00637 0.0055 0.0106 0.00714 0.00751 0.00959 0.00693 0.011 0.701 0.00504 143 0.828 451 0.11 0.141 0.268 0.388 0.00614 1.22 0.00516 0.00678 0.441 5.92 366 114 252 646 280 129 0.868
8 m0_p8 257 1.89 76.6 True 1.94 74.3 True 1.96 88.5 True AACCCCTCCTGGGAAAGCAGAATTAGCATCAAAATACAAACAGCACCAGGGCCATCCACAACA 669 331 3.57 0.00563 0.00589 0.00949 0.0193 0.0128 0.0069 0.00341 0.00398 0.00646 0.00573 0.0108 0.00722 0.00764 0.00976 0.00725 0.0123 0.559 0.00493 143 0.812 456 0.0916 0.175 0.21 0.271 0.0057 1.26 0.00527 0.00697 0.514 6.51 474 113 255 821 246 107 0.753
11 m0_p11 183 2.03 46.6 True 2.04 79.7 True 2 50.2 True CTAGGCCATTGTGTATTCCTTTGTTTGGGTGTGACTCGGCTATTGTCCTAAGTAATTACTATGCAGACTA 530 219 1.32 0.00509 0.00465 0.000186 0.00222 0.00185 0.0012 0.00234 0.00372 0.00594 0.00519 0.00983 0.00604 0.00631 0.00712 0.00279 0.0117 0.653 0.00502 164 0.964 554 0.13 0.254 0.134 0.434 0.00712 5.44 0.00559 0.00598 0.408 8.84 733 232 416 1.08e+03 304 141 1.49
7 m0_p7 317 2.32 121 True 1.98 74.7 True 2.17 97.7 True GATGCTGGGAGAACCTGGAGGCCAGGTCTGCTTTGATATGTTAATTAGGCACCTCGGTCCTTTTT 787 375 3.1 0.00563 0.0338 0.0194 0.0151 0.00921 0.0163 0.00291 0.00273 0.00602 0.00571 0.011 0.00729 0.00784 0.0102 0.00743 0.00835 0.535 0.00509 183 0.876 571 0.0796 0.162 0.169 0.167 0.00531 0.678 0.00505 0.00523 0.169 1.44 249 94.8 241 552 300 125 0.806
15 m0_p15 122 1.98 34.6 True 1.96 35.9 True 1.94 40.4 True CCCCCCAGAGCTATTCTAGCTTTGTTATTTGCATAACAAAGCAAGTTTCACCCTCTCTA 678 361 4.32 0.00564 0.0216 0.0286 0.0394 0.0274 0.0276 0.00392 0.00451 0.00764 0.0094 0.0139 0.00881 0.0095 0.0124 0.00962 0.0143 0.259 0.00502 165 0.803 509 0.0856 0.158 0.205 0.315 0.00587 2.05 0.0049 0.00576 0.329 4.63 474 165 310 712 273 130 0.824
4 m0_p4 659 1.99 56.2 True 1.99 91.1 True 1.96 81.2 True TTTTTTCATAACAATGGCCGGTTTTTCTCTGA 665 297 1.8 0.00512 0.0205 0.0257 0.0318 0.0374 0.0385 0.00294 0.00319 0.00667 0.00842 0.0129 0.00761 0.00821 0.00987 0.00562 0.0139 0.357 0.00497 179 0.771 562 0.0276 0.0585 0.0567 0.204 0.00609 2.12 0.00507 0.00544 0.138 3.16 532 172 354 902 337 148 0.76
18 m0_p18 100 nan nan nan 1.86 86.1 True 1.89 67.2 True TATGAGTGAATTCTCACGTTTACAAGCTTTTGTTGTGCAAACCTTGTTCCTTAATTTAAAACTATTGGTT 704 329 4.38 0.00546 0.00942 0.0166 0.0394 0.0443 0.0203 0.00203 0.00116 0.00513 0.00624 0.00941 0.00623 0.00665 0.00837 0.00492 0.0066 0.842 0.00493 125 0.755 430 0.203 0.246 0.361 0.602 0.00722 3.48 0.00487 0.00512 0.226 1.24 149 136 286 313 167 56.1 0.39
0 m0_p0 11301 1.96 103 True 1.99 85.7 True 2 97.6 True CCTTTGTTATGCAAAT 751 377 4.52 0.00583 0.0292 0.0379 0.054 0.0381 0.0182 0.00909 0.0102 0.0177 0.0294 0.038 0.0228 0.0257 0.0367 0.0337 0.026 0.89 0.00502 148 0.578 482 0.016 0.0405 0.156 0.188 0.006 1.75 0.00509 0.00527 0.0763 1.51 306 131 288 599 263 106 0.485

Column description

Table interaction options