idx pattern logo
pwm		 logo
imp		 n
seqlets		 Klf4
pos
meandiff		 Klf4
pos
std		 Klf4
pos
unimodal		 Nanog
pos
meandiff		 Nanog
pos
std		 Nanog
pos
unimodal		 Oct4
pos
meandiff		 Oct4
pos
std		 Oct4
pos
unimodal		 Sox2
pos
meandiff		 Sox2
pos
std		 Sox2
pos
unimodal		 consensus Klf4
periodicity
10bp		 Nanog
periodicity
10bp		 Sox2
periodicity
10bp		 Oct4
periodicity
10bp		 Sall4
periodicity
10bp		 Oct4
imp
profile		 Oct4
imp
counts		 Sox2
imp
counts		 Sall4
imp
counts		 Nanog
imp
counts		 Sox2
imp
profile		 Nanog
imp
profile		 Klf4
imp
counts		 Klf4
imp
profile		 Sall4
footprint
max		 Sall4
footprint
strandcor		 Sall4
footprint
counts		 Sall4
imp
profile		 Sall4
region
counts		 Klf4
region
counts		 Klf4
footprint
counts		 Klf4
footprint
max		 Sox2
footprint
max		 Sox2
region
counts		 Sox2
footprint
counts		 Nanog
region
counts		 Nanog
footprint
counts		 Nanog
footprint
max		 ic
pwm
mean		 Sall4
footprint
entropydiff		 Klf4
footprint
strandcor		 Nanog
footprint
entropydiff		 Nanog
footprint
strandcor		 Sox2
footprint
strandcor		 Sox2
footprint
entropydiff		 Klf4
footprint
entropydiff		 Oct4
footprint
entropydiff		 Oct4
footprint
strandcor		 Oct4
footprint
max		 Oct4
footprint
counts		 Oct4
region
counts
8 m0_p8 472 1.99 162 True 1.94 103 True 2.1 164 True 1.86 189 True GCTCTCGCGAGATC 0.0196 0.0218 0.0199 0.0229 0.0221 0.0448 0.0446 0.0312 0.0298 0.0471 0.0309 0.0685 0.0289 0.0359 42.3 0.00961 1.51e+03 0.0549 2.62e+03 377 132 1.47 0.131 134 26.7 202 86.4 1.72 1.22 0.46 0.00541 0.375 0.00772 0.00502 0.0899 0.094 0.0581 0.00513 0.594 97.4 364
22 m0_p22 70 1.95 38.6 True 2.03 28.5 True 2.06 39.5 True 1.93 29.8 True AGGGCTGGTCTGCAGAGTGTTTACTTGGGACAATAGCCAGTCTTACCCAGACAAAGGAATTCACAATGGC 0.00266 0.00732 0.0134 0.0113 0.00399 0.00376 0.0086 0.00757 0.00713 0.0122 0.00811 0.0157 0.00685 0.00401 1.28 0.00511 157 0.00303 550 322 154 1.45 9.96 580 369 1.03e+03 727 6.61 1.34 0.44 0.00625 0.539 0.0064 0.00912 0.828 0.546 0.503 0.00531 3.7 320 670
25 m0_p25 64 1.97 50 True 2.13 38.8 True 2.05 39.1 True 1.97 28.1 True GAAAAGCTCAGGGCTAGTCTGCATAGTAATTACTTAGGACAATAGCCGAGTCACACCCAAACACAGGAAT 0.00055 0.00356 0.00409 0.00325 0.000635 0.00329 0.00713 0.00625 0.00617 0.00939 0.00486 0.0126 0.00661 0.00584 1.31 0.00518 136 0.00305 442 229 126 2.09 6.16 382 221 672 449 7.11 1.54 0.499 0.00661 0.631 0.00669 0.0087 0.822 0.677 0.485 0.00537 2.65 270 574
20 m0_p20 147 1.93 60 True 1.96 60.8 True 2.02 38.6 True 2.02 68.8 True TAGCAGAGTCTCAGAGAAGAGCAGCGGTAGTTGACATAACAATATAGCCATCTAAGTCGGAAGGCTACAC 0.000775 0.00128 0.00758 0.0142 0.00217 0.00831 0.0118 0.00915 0.00877 0.0135 0.00993 0.0184 0.00822 0.00637 1 0.00516 126 0.00402 376 260 144 1.53 1.6 220 103 762 528 11.2 0.998 0.237 0.00628 0.978 0.0101 0.00808 0.696 0.45 0.479 0.00673 4.15 318 582
6 m0_p6 675 2.05 50.9 True 2.06 46.3 True 2.05 73.3 True 2 65.4 True TTTCTTGAAGAGAAAAAGCGCAGGTGGCAGAACAATAGAGCCATCTAGGTAGGAAGGCTCCACCCTAGGT 0.0117 0.0216 0.0394 0.027 0.0118 0.00441 0.00995 0.0084 0.00858 0.0132 0.00908 0.0187 0.00995 0.011 0.976 0.00507 177 0.00428 508 492 311 2.64 2.48 261 134 641 410 6.09 0.809 0.116 0.00576 0.527 0.00686 0.00874 0.616 0.304 0.142 0.00521 0.921 149 365
7 m0_p7 548 1.98 39.8 True 1.97 45.5 True 2.06 78 True 2.05 64.9 True GCAGTATCTTGAAGAGGAACAGCGGCAGTGGCAGAACAATAGAGTCATCTAGGGAGGAAGGCTCCACCCT 0.00266 0.00592 0.0103 0.00483 0.00133 0.00377 0.00839 0.00711 0.00741 0.0108 0.00679 0.0162 0.00881 0.0104 1.08 0.00497 200 0.00372 554 603 393 3.37 2.93 280 147 662 426 6.29 0.812 0.114 0.00578 0.507 0.00706 0.00902 0.6 0.316 0.119 0.00502 0.888 161 403
19 m0_p19 156 1.66 151 True 1.79 104 True 1.89 77.6 True 1.83 70.7 True GAGTGAATTCTCACGTTTACAAGCTTTTGTTGTGCAAACCTTGTTCCTTAATTTAAAACTATTGGTTAA 0.00416 0.014 0.0298 0.0316 0.0115 0.00581 0.00895 0.00699 0.00656 0.00989 0.0074 0.00693 0.00537 0.00141 1.13 0.00492 149 0.00222 516 206 70.7 0.555 5.47 387 204 432 188 1.65 1.04 0.249 0.00483 0.295 0.00524 0.00802 0.685 0.311 0.41 0.00583 6.35 461 934
12 m0_p12 268 2.18 48.3 True 2.09 48.2 False 2.07 41.8 True 2.16 54.8 True TTTACTTCTAGTAGAGACAGTGAAACTAATTTGGCATTACAAAGAACAGAGCTAGAAAAGCTCAGGGC 0.0063 0.00493 0.00983 0.0233 0.00887 0.00842 0.0115 0.00898 0.00832 0.0132 0.00933 0.0143 0.00716 0.00419 0.854 0.00497 169 0.00354 529 290 143 1.05 2.91 410 229 844 539 4.09 0.437 0.086 0.00504 0.274 0.00558 0.00585 0.35 0.207 0.157 0.00545 3.57 471 866
17 m0_p17 172 1.95 103 True 2.27 73.5 True 2.04 49.9 True 2.04 53.4 True TGTGCTCTGGGTAAAGTTTGTGCTTTGTGTATTCAGATGCTGATTTCTGTGCCCAGAGATCTGGTTGCA 0.000872 0.00066 0.00326 0.00807 0.00429 0.00839 0.0107 0.00824 0.00753 0.0116 0.0063 0.0112 0.00623 0.00341 0.994 0.0051 180 0.0036 502 202 92.2 0.64 2.59 345 192 720 446 3.42 0.641 0.11 0.00556 0.284 0.00548 0.00628 0.411 0.24 0.271 0.00563 5.03 538 944
11 m0_p11 323 2.05 93.2 True 2.05 44.8 True 2.05 33.3 True 2.05 89.7 True TCGGCAGCCCCTCCCAGGAAAGCAGAATTAGCATCAAAATACAAACAGCACCAGGGCCATCCACAACA 0.000787 0.00413 0.00707 0.0169 0.006 0.00687 0.00954 0.00748 0.00708 0.0106 0.00536 0.0113 0.00621 0.00337 0.86 0.00505 129 0.00325 411 234 104 0.833 1.2 238 104 580 357 6.24 0.835 0.142 0.00528 0.457 0.007 0.00573 0.297 0.197 0.262 0.00578 3.75 316 626
18 m0_p18 191 2.22 52.5 True 2.17 44.8 True 2.13 41.8 True 2.14 55.1 True GACCCATCCTTTGTTTCAGCTGGATTGTGTTGCAAAGCAAGCTCAGCAGGCAGTCTACTCCTCTAAGAT 0.00435 0.00319 0.00729 0.0179 0.00661 0.00524 0.00852 0.00714 0.00669 0.0107 0.00535 0.0111 0.00623 0.00375 1.08 0.0048 179 0.00298 538 281 138 0.887 1.37 255 113 553 328 3.84 0.977 0.179 0.0051 0.351 0.00545 0.00523 0.277 0.237 0.198 0.00514 1.72 274 573
23 m0_p23 78 1.96 56 True 1.89 84.3 True 1.92 65.1 True 2.05 56.3 True ACACTTGCCTCTCTGGAAGGGAGAGGCTAATTACCATTTCTAAAGGGGGGAATGAAAAGGTCAGCTCGGG 0.00232 0.0059 0.0146 0.0204 0.00486 0.00561 0.00879 0.00708 0.00682 0.0102 0.00494 0.0104 0.00636 0.00372 1.06 0.00503 175 0.00303 555 393 186 1.48 2.52 265 131 516 234 2.06 0.718 0.203 0.00523 0.349 0.00533 0.0065 0.628 0.304 0.263 0.00551 2.17 291 593
21 m0_p21 109 1.83 35.4 True 1.9 49.7 True 1.83 66.9 True 1.99 34.1 True AGAGCCTTGAGGAGTTGACTGCCTGCTGAGCTTGCTTTGCAACTCAATCCAGCTGAAACAAAGGATGGGT 0.00167 0.000758 0.00169 0.00461 0.000882 0.00519 0.00941 0.00784 0.00759 0.0121 0.007 0.0138 0.00736 0.00462 1.3 0.00485 187 0.00344 502 275 147 1.37 1.79 232 101 435 232 1.7 1.37 0.283 0.00557 0.402 0.00544 0.00614 0.495 0.426 0.312 0.0054 2.39 266 524
13 m0_p13 277 1.67 131 True 1.86 91.5 True 1.86 93.5 True 1.9 75.6 True AAAAGGAAACCTGGAGTAAATGACTGAATTGATATGTAAATAAAAAAAAGGGCTTTTTTTTTTAAAAGA 0.0179 0.0259 0.0349 0.0416 0.0283 0.00435 0.00831 0.00656 0.00611 0.00942 0.00421 0.00741 0.00473 0.00109 0.862 0.00497 161 0.00185 584 272 90.4 0.56 0.714 237 93.6 537 264 1.61 0.556 0.134 0.00471 0.195 0.00487 0.00494 0.218 0.203 0.134 0.00502 1.69 267 645
15 m0_p15 201 2.07 144 True 2.14 87.6 True 2.15 112 True 2.18 118 True GGAAGGGTCCCACCCAACTAGTTTATTATCTGTGCTTAACAAAGGCAGGCAGATCTCTGAATTCTTTTG 0.00147 0.000747 0.00316 0.00764 0.00279 0.00468 0.00813 0.00664 0.00643 0.00961 0.00464 0.0092 0.00602 0.00415 0.967 0.005 212 0.00276 687 381 163 1.31 1.6 297 127 722 344 3.52 0.407 0.104 0.00504 0.224 0.00524 0.00569 0.249 0.202 0.148 0.00507 1.95 286 700
10 m0_p10 344 2.19 131 True 2.04 107 True 2.05 81.4 True 2.09 93.9 True CCAATAGTTTTAAATTAAGGAACAAGATTTGCACAACAAAAGCTTGTAAATATAA 0.0027 0.00481 0.0115 0.0142 0.00751 0.00732 0.0108 0.00839 0.00778 0.0122 0.0077 0.00978 0.00646 0.00286 0.67 0.00499 158 0.00296 545 284 109 0.523 3.73 343 175 556 279 1.76 0.466 0.0593 0.00492 0.122 0.00517 0.0071 0.36 0.0841 0.137 0.00521 3.82 363 761
3 m0_p3 1584 2.02 118 True 2.01 89.1 True 2.03 78.4 True 2.01 73.4 True TTCTTTGGGGAAGTCCAGGTACTCCATTCATTTGCAAATTAGCAACGATCAAGCTCAGACT 0.0111 0.0145 0.0213 0.0276 0.0165 0.00693 0.00991 0.00788 0.00727 0.0116 0.00648 0.0127 0.00609 0.00286 0.926 0.00502 180 0.00306 554 298 132 0.714 1.63 268 127 591 323 3.17 0.446 0.0586 0.00508 0.177 0.0056 0.00587 0.2 0.0792 0.141 0.0054 2.34 334 664
14 m0_p14 256 1.98 141 True 2.01 107 True 2.02 78.5 True 2.03 106 True CACTCCCTATGGGCCTATGGGGGCCATTTTCATTCAAACCACCACACAGGTCAT 0.0126 0.0139 0.0216 0.0246 0.0181 0.00639 0.0094 0.00733 0.00684 0.0103 0.00502 0.00858 0.00565 0.00274 0.884 0.00504 152 0.0028 493 273 119 0.802 1.26 262 113 541 265 1.63 0.515 0.0769 0.00513 0.156 0.00535 0.00532 0.2 0.137 0.162 0.00562 3.07 329 678
26 m0_p26 76 1.97 115 True 2.02 86.6 True 1.99 93.6 True 2.1 101 True GCAGGTTTAACCTCAGACAGGAAGTGGCACATCAAAGGAGAGGAATGGGAAGCTGAACAGCAGGGGG 0.0111 0.0173 0.0218 0.021 0.012 0.00411 0.00768 0.00663 0.0065 0.0103 0.00519 0.015 0.00638 0.00475 0.928 0.00508 146 0.00313 435 213 100 0.737 1.22 283 135 691 389 3.48 0.342 0.147 0.0051 0.245 0.00539 0.00547 0.31 0.323 0.2 0.00501 1.85 220 501
24 m0_p24 89 2.04 47.8 True 1.95 38.5 True 1.94 49.5 True 1.93 48.6 False CTGCCTTAAATGCGCCGAAGATGACCGGAAATGGACACTTCCCCTGGCACTCAGA 0.0119 0.0201 0.0119 0.00724 0.0131 0.00364 0.0069 0.00604 0.006 0.00919 0.00418 0.0156 0.00603 0.00448 1.19 0.00518 202 0.00321 566 289 139 0.904 0.91 272 125 730 469 5.4 0.181 0.134 0.00555 0.446 0.00666 0.00516 0.25 0.257 0.105 0.005 1.4 292 615
5 m0_p5 930 2 66.3 True 2.03 60.3 True 2.03 67 True 2.05 74.2 True GCCCCCTGCTGTGAGGCTTT 0.0296 0.0273 0.0249 0.0295 0.0258 0.00722 0.0111 0.00934 0.0094 0.0149 0.00849 0.022 0.0106 0.0121 0.953 0.00506 186 0.00588 523 344 187 1.09 0.843 289 142 785 500 2.64 0.472 0.0324 0.00544 0.174 0.00569 0.00529 0.0979 0.12 0.0509 0.00516 1.4 279 583
9 m0_p9 458 2 120 True 1.96 105 True 1.96 76.9 True 1.96 99.8 True TTCCAGGCTTAATTTGCAAAACAAAGGA 0.00591 0.0048 0.0165 0.0336 0.0126 0.0151 0.0194 0.0144 0.0131 0.0217 0.0163 0.0167 0.0109 0.00615 0.706 0.00507 167 0.00525 540 291 125 0.707 1.35 257 107 625 308 1.99 0.751 0.0531 0.00525 0.126 0.00535 0.00569 0.181 0.0951 0.0883 0.0052 2.06 257 591
1 m0_p1 3073 2.03 135 True 1.97 93.1 True 1.98 81.3 True 2.01 95.4 True ATTCAAATGCAAAT 0.0112 0.0158 0.0193 0.0278 0.0215 0.0202 0.0229 0.0164 0.0142 0.0244 0.0142 0.0179 0.00953 0.00319 0.579 0.00502 156 0.00554 501 287 115 0.461 0.673 238 94.7 593 313 1.55 0.968 0.0169 0.00511 0.0834 0.00521 0.00513 0.0694 0.0406 0.072 0.00521 1.91 298 637
0 m0_p0 20336 2.04 158 True 2.03 118 True 2.01 85.9 True 2.02 104 True ATTTGCATAACAAAGG 0.0118 0.0105 0.0253 0.0491 0.0253 0.0317 0.0347 0.0243 0.0215 0.0359 0.0268 0.0252 0.0164 0.00955 0.579 0.00502 150 0.00874 489 272 108 0.479 1.62 282 128 585 300 1.48 0.891 0.016 0.00509 0.0785 0.00529 0.00594 0.181 0.0396 0.152 0.0058 4.33 373 740
16 m0_p16 191 2 80.1 True 2 68.7 True 1.99 33.2 True 1.97 52.4 True TTTACCCAAATTTGCATAACAAAAGA 0.0105 0.0196 0.0231 0.0286 0.0153 0.0215 0.0227 0.0164 0.0148 0.0243 0.0197 0.0246 0.0118 0.00747 0.974 0.00505 207 0.00678 601 405 209 1.24 2.32 380 209 1.03e+03 707 5.22 0.502 0.0649 0.00562 0.319 0.0063 0.00593 0.275 0.205 0.234 0.00592 6 625 1.05e+03
4 m0_p4 1159 2.05 83.8 True 1.99 79.5 True 2.02 62.4 True 2.04 70.4 True AACAATGG 0.027 0.0265 0.0362 0.0473 0.0327 0.0179 0.0282 0.0229 0.0206 0.0406 0.036 0.0515 0.0187 0.0149 0.851 0.00501 195 0.0083 560 338 171 0.841 2.29 400 229 1.24e+03 881 9.25 1.02 0.0277 0.00523 0.373 0.00639 0.00603 0.236 0.0811 0.0594 0.00515 1.37 285 603
2 m0_p2 1845 2.1 155 True 2.05 119 True 2.03 75 True 2.1 132 True ATTTGCATATGCATA 0.0145 0.0396 0.0621 0.0876 0.0884 0.0161 0.0177 0.0124 0.0108 0.0171 0.00899 0.0107 0.00691 0.0017 0.481 0.00502 135 0.0046 451 261 99 0.371 0.34 208 70.8 455 209 0.854 0.871 0.0135 0.00509 0.0415 0.0051 0.00507 0.0355 0.03 0.0812 0.00537 1.86 312 663

Column description

Table interaction options