Information for 18-CCCGTAGG (Motif 31)

A G T C A G T C A G T C C T A G A C G T C G T A T A C G A C T G
Reverse Opposite:
A G T C A G T C C G A T C G T A A G T C A C T G A C T G A C T G
p-value:1e-11
log p-value:-2.664e+01
Information Content per bp:1.859
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif0.17%
Number of Background Sequences with motif6.8
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets10.1 +/- 3.5bp
Average Position of motif in Background12.3 +/- 3.7bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:1
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---CCCGTAGG
TTCCCCCTAC-
 A C G T A C G T A C G T A G T C A G T C A G T C C T A G A C G T C G T A T A C G A C T G
A G C T G A C T G T A C G T A C A T G C G T A C G T A C A C G T G T A C T A G C A C G T

THAP1/MA0597.1/Jaspar

Match Rank:2
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---CCCGTAGG
CTGCCCGCA--
 A C G T A C G T A C G T A G T C A G T C A G T C C T A G A C G T C G T A T A C G A C T G
A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A A C G T A C G T

GCM2/MA0767.1/Jaspar

Match Rank:3
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CCCGTAGG
TACCCGCATN
 A C G T A C G T A G T C A G T C A G T C C T A G A C G T C G T A T A C G A C T G
G A C T C T G A A G T C G T A C G T A C T A C G A G T C T C G A A G C T T G C A

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:4
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CCCGTAGG-
GCACGTACCC
 A C G T A G T C A G T C A G T C C T A G A C G T C G T A T A C G A C T G A C G T
C A T G A G T C C T G A T G A C A T C G G A C T G T C A A G T C T A G C G A T C

PB0024.1_Gcm1_1/Jaspar

Match Rank:5
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----CCCGTAGG---
TCGTACCCGCATCATT
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C A G T C C T A G A C G T C G T A T A C G A C T G A C G T A C G T A C G T
G C A T T G A C T C A G C G A T T C G A G T A C G T A C G T A C A T C G A G T C C G T A A G C T T A G C C G T A G A C T C A G T

ELF4/MA0641.1/Jaspar

Match Rank:6
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CCCGTAGG--
AACCCGGAAGTG
 A C G T A C G T A G T C A G T C A G T C C T A G A C G T C G T A T A C G A C T G A C G T A C G T
C G T A G C T A G T A C T A G C T G A C C T A G A C T G C G T A G T C A T C A G A G C T C T A G

ELF1/MA0473.2/Jaspar

Match Rank:7
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CCCGTAGG--
AACCCGGAAGTG
 A C G T A C G T A G T C A G T C A G T C C T A G A C G T C G T A T A C G A C T G A C G T A C G T
C G T A G C T A G T A C T A G C G T A C A C T G A C T G C T G A G C T A C T A G G A C T T C A G

GCM1/MA0646.1/Jaspar

Match Rank:8
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---CCCGTAGG
GTACCCGCATN
 A C G T A C G T A C G T A G T C A G T C A G T C C T A G A C G T C G T A T A C G A C T G
T A C G A G C T T C G A T A G C T G A C G T A C C A T G A G T C C G T A A G C T T C A G

PB0128.1_Gcm1_2/Jaspar

Match Rank:9
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----CCCGTAGG----
NTCNTCCCCTATNNGNN
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C A G T C C T A G A C G T C G T A T A C G A C T G A C G T A C G T A C G T A C G T
T G A C C A G T A G T C T A G C A G C T A G T C T A G C G T A C G T A C A G C T C T G A A G C T C A T G A T G C T A C G G T A C G C T A

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:10
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CCCGTAGG---
TGCCCTGAGGGCA
 A C G T A C G T A G T C A G T C A G T C C T A G A C G T C G T A T A C G A C T G A C G T A C G T A C G T
G C A T A T C G A G T C A G T C A G T C A G C T A C T G T C G A T C A G A C T G A C T G A T G C C G T A