Information for 5-AGATGGATCTGT (Motif 3)

C T G A C T A G C G T A C G A T A T C G C T A G T G C A A C G T A G T C A C G T C T A G A C G T
Reverse Opposite:
C G T A A G T C C G T A A C T G C G T A A C G T A G T C A T G C G C T A A C G T A G T C A G C T
p-value:1e-64
log p-value:-1.485e+02
Information Content per bp:1.839
Number of Target Sequences with motif36.0
Percentage of Target Sequences with motif0.38%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets10.9 +/- 3.0bp
Average Position of motif in Background8.4 +/- 2.1bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer

Match Rank:1
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AGATGGATCTGT
NTATYGATCH--
 C T G A C T A G C G T A C G A T A T C G C T A G T G C A A C G T A G T C A C G T C T A G A C G T
C T A G C A G T C G T A A C G T A G T C A C T G C G T A A G C T A G T C G A T C A C G T A C G T

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:2
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:AGATGGATCTGT
--ATTGATTYND
 C T G A C T A G C G T A C G A T A T C G C T A G T G C A A C G T A G T C A C G T C T A G A C G T
A C G T A C G T C G T A A C G T A G C T A T C G G T C A A G C T G A C T A G C T T G A C C G A T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:3
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---AGATGGATCTGT
AACAGATGGC-----
 A C G T A C G T A C G T C T G A C T A G C G T A C G A T A T C G C T A G T G C A A C G T A G T C A C G T C T A G A C G T
C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C A C G T A C G T A C G T A C G T A C G T

PB0163.1_Six6_2/Jaspar

Match Rank:4
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:AGATGGATCTGT-----
ANNNGGATATATCCNNN
 C T G A C T A G C G T A C G A T A T C G C T A G T G C A A C G T A G T C A C G T C T A G A C G T A C G T A C G T A C G T A C G T A C G T
G T C A C T A G C T A G A G T C T C A G C A T G T C G A A C G T T G C A A G C T C T G A A G C T T G A C A T G C T A G C G C T A A C G T

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:5
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-AGATGGATCTGT
ATGATKGATGRC-
 A C G T C T G A C T A G C G T A C G A T A T C G C T A G T G C A A C G T A G T C A C G T C T A G A C G T
C T G A C G A T A T C G C G T A C G A T C A G T C T A G C G T A C G A T A C T G C T G A A T G C A C G T

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:6
Score:0.55
Offset:-6
Orientation:forward strand
Alignment:------AGATGGATCTGT
AAGGCCAGATGGTCCGG-
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T A G C G T A C G A T A T C G C T A G T G C A A C G T A G T C A C G T C T A G A C G T
G C T A T C G A C T A G C A T G T A G C G T A C C T G A A C T G T C G A C G A T A C T G C A T G A G C T G A T C A T G C A T C G T C A G A C G T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:7
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---AGATGGATCTGT
AACAGATGGT-----
 A C G T A C G T A C G T C T G A C T A G C G T A C G A T A T C G C T A G T G C A A C G T A G T C A C G T C T A G A C G T
T C G A T C G A A G T C C G T A A C T G G T C A G C A T A C T G A C T G A G C T A C G T A C G T A C G T A C G T A C G T

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:8
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-AGATGGATCTGT--
VAGRACAKNCTGTBC
 A C G T C T G A C T A G C G T A C G A T A T C G C T A G T G C A A C G T A G T C A C G T C T A G A C G T A C G T A C G T
T G A C C T G A C T A G T C G A C T G A A T G C C G T A A C T G G C A T G T A C G C A T A T C G G C A T A G C T G A T C

GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:9
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--AGATGGATCTGT-
NNAGATNVNWATCTN
 A C G T A C G T C T G A C T A G C G T A C G A T A T C G C T A G T G C A A C G T A G T C A C G T C T A G A C G T A C G T
C T A G T G A C C G T A A C T G C G T A A C G T G C T A T C G A A G C T C G A T C G T A A C G T A G T C C G A T T A C G

PB0144.1_Lef1_2/Jaspar

Match Rank:10
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--AGATGGATCTGT--
GAAGATCAATCACTTA
 A C G T A C G T C T G A C T A G C G T A C G A T A T C G C T A G T G C A A C G T A G T C A C G T C T A G A C G T A C G T A C G T
T A C G C G T A T C G A T A C G G C T A C G A T A G T C C G T A C T G A C A G T G A T C C T G A G T A C A G C T G C A T C G T A