Information for 14-CTGCATGA (Motif 29)

A G T C A C G T A C T G A G T C C G T A A C G T A C T G C G T A
Reverse Opposite:
A C G T A G T C C G T A A C G T A C T G A G T C C G T A A C T G
p-value:1e-12
log p-value:-2.929e+01
Information Content per bp:1.530
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif0.20%
Number of Background Sequences with motif8.1
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets7.8 +/- 3.3bp
Average Position of motif in Background8.8 +/- 3.5bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:1
Score:0.67
Offset:3
Orientation:forward strand
Alignment:CTGCATGA-
---CATGAC
 A G T C A C G T A C T G A G T C C G T A A C G T A C T G C G T A A C G T
A C G T A C G T A C G T T A G C T C G A A C G T C A T G C G T A A G T C

PB0207.1_Zic3_2/Jaspar

Match Rank:2
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----CTGCATGA--
GAGCACAGCAGGACA
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C T G A G T C C G T A A C G T A C T G C G T A A C G T A C G T
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A

Pax2/MA0067.1/Jaspar

Match Rank:3
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:CTGCATGA--
--NCGTGACN
 A G T C A C G T A C T G A G T C C G T A A C G T A C T G C G T A A C G T A C G T
A C G T A C G T T A C G G T A C C T A G A G C T T C A G C G T A G A T C C G A T

PB0206.1_Zic2_2/Jaspar

Match Rank:4
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----CTGCATGA--
CCACACAGCAGGAGA
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C T G A G T C C G T A A C G T A C T G C G T A A C G T A C G T
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:5
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---CTGCATGA
DCTCAGCAGG-
 A C G T A C G T A C G T A G T C A C G T A C T G A G T C C G T A A C G T A C T G C G T A
C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:6
Score:0.63
Offset:-7
Orientation:forward strand
Alignment:-------CTGCATGA--
AATCGCACTGCATTCCG
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C T G A G T C C G T A A C G T A C T G C G T A A C G T A C G T
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:7
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CTGCATGA--
TTGCGTGCVA
 A G T C A C G T A C T G A G T C C G T A A C G T A C T G C G T A A C G T A C G T
A C G T C A G T A C T G A G T C T C A G C G A T C A T G G T A C T A G C C G T A

PB0205.1_Zic1_2/Jaspar

Match Rank:8
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----CTGCATGA--
CCACACAGCAGGAGA
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C T G A G T C C G T A A C G T A C T G C G T A A C G T A C G T
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:9
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CTGCATGA-
ATTGCATCAK
 A C G T A G T C A C G T A C T G A G T C C G T A A C G T A C T G C G T A A C G T
T C G A A C G T A C G T C T A G A G T C T C G A G C A T G T A C C T G A A C G T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:10
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CTGCATGA
-TGCGTG-
 A G T C A C G T A C T G A G T C C G T A A C G T A C T G C G T A
A C G T G A C T A C T G A G T C A C T G A C G T A C T G A C G T