Information for 10-TAGATCGC (Motif 27)

C G A T G C T A A C T G G T C A A G C T A G T C T C A G G T A C
Reverse Opposite:
A C T G A G T C T C A G C T G A A C G T A G T C C G A T G C T A
p-value:1e-15
log p-value:-3.491e+01
Information Content per bp:1.729
Number of Target Sequences with motif38.0
Percentage of Target Sequences with motif0.40%
Number of Background Sequences with motif31.6
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets9.9 +/- 4.3bp
Average Position of motif in Background10.9 +/- 3.9bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:1
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-TAGATCGC-
ATTGATTYND
 A C G T C G A T G C T A A C T G G T C A A G C T A G T C T C A G G T A C A C G T
C G T A A C G T A G C T A T C G G T C A A G C T G A C T A G C T T G A C C G A T

HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer

Match Rank:2
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---TAGATCGC
NTATYGATCH-
 A C G T A C G T A C G T C G A T G C T A A C T G G T C A A G C T A G T C T C A G G T A C
C T A G C A G T C G T A A C G T A G T C A C T G C G T A A G C T A G T C G A T C A C G T

CUX1/MA0754.1/Jaspar

Match Rank:3
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---TAGATCGC
NTATCGATTA-
 A C G T A C G T A C G T C G A T G C T A A C T G G T C A A G C T A G T C T C A G G T A C
C A G T A C G T C G T A G C A T A G T C T C A G T C G A G A C T G A C T C T G A A C G T

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:4
Score:0.67
Offset:1
Orientation:forward strand
Alignment:TAGATCGC-
-AGATAASR
 C G A T G C T A A C T G G T C A A G C T A G T C T C A G G T A C A C G T
A C G T G C T A A T C G G C T A G A C T G C T A T C G A T A G C T C G A

Dux/MA0611.1/Jaspar

Match Rank:5
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:TAGATCGC
TTGATTGN
 C G A T G C T A A C T G G T C A A G C T A G T C T C A G G T A C
G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G

CUX2/MA0755.1/Jaspar

Match Rank:6
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---TAGATCGC
TTATCGATTA-
 A C G T A C G T A C G T C G A T G C T A A C T G G T C A A G C T A G T C T C A G G T A C
C G A T C G A T C G T A G C A T G A T C T C A G T C G A G A C T G A C T C G T A A C G T

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:7
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-TAGATCGC-
GTTAATGGCC
 A C G T C G A T G C T A A C T G G T C A A G C T A G T C T C A G G T A C A C G T
A T C G A G C T C A G T T C G A C T G A C G A T C A T G C T A G A T G C G A T C

GATA5/MA0766.1/Jaspar

Match Rank:8
Score:0.65
Offset:1
Orientation:forward strand
Alignment:TAGATCGC-
-AGATAAGA
 C G A T G C T A A C T G G T C A A G C T A G T C T C A G G T A C A C G T
A C G T G C T A A C T G C T G A A C G T G C T A C T G A T A C G T C G A

Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer

Match Rank:9
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---TAGATCGC-
TGATTRATGGCY
 A C G T A C G T A C G T C G A T G C T A A C T G G T C A A G C T A G T C T C A G G T A C A C G T
C G A T C T A G T C G A A G C T C G A T C T G A C G T A A G C T A C T G C T A G A T G C G A T C

PH0016.1_Cux1_1/Jaspar

Match Rank:10
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----TAGATCGC----
ACCGGTTGATCACCTGA
 A C G T A C G T A C G T A C G T A C G T C G A T G C T A A C T G G T C A A G C T A G T C T C A G G T A C A C G T A C G T A C G T A C G T
C T G A A T G C G A T C T C A G T C A G G A C T G C A T C T A G C T G A C G A T G A T C G C T A G T A C T A G C C G A T A T C G C T G A