Information for 18-AGTACCTTGA (Motif 21)

C T G A A C T G A C G T C G T A A G T C A G T C A G C T A C G T A C T G C G T A
Reverse Opposite:
A C G T A G T C G T C A C T G A A C T G C T A G A C G T G T C A A G T C A G C T
p-value:1e-20
log p-value:-4.737e+01
Information Content per bp:1.873
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif0.27%
Number of Background Sequences with motif7.7
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets9.7 +/- 3.5bp
Average Position of motif in Background10.7 +/- 4.0bp
Strand Bias (log2 ratio + to - strand density)1.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Esrra/MA0592.2/Jaspar

Match Rank:1
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:AGTACCTTGA-
ATGACCTTGAA
 C T G A A C T G A C G T C G T A A G T C A G T C A G C T A C G T A C T G C G T A A C G T
C G T A A G C T T A C G T G C A T G A C T G A C A G C T A G C T A T C G C T G A T G C A

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:2
Score:0.72
Offset:-6
Orientation:forward strand
Alignment:------AGTACCTTGA-
ACTCCAAGTACTTGGAA
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A A C T G A C G T C G T A A G T C A G T C A G C T A C G T A C T G C G T A A C G T
T C G A G T A C C G A T A T G C T A G C C T G A C T G A C A T G A G C T T C G A G T A C G A C T G A C T A C T G T C A G T G C A G T C A

ESRRB/MA0141.3/Jaspar

Match Rank:3
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-AGTACCTTGA
NATGACCTTGA
 A C G T C T G A A C T G A C G T C G T A A G T C A G T C A G C T A C G T A C T G C G T A
C G A T C G T A G A C T C T A G T C G A T A G C A G T C A G C T C G A T A T C G C T G A

PB0014.1_Esrra_1/Jaspar

Match Rank:4
Score:0.68
Offset:-4
Orientation:reverse strand
Alignment:----AGTACCTTGA---
NNNNATGACCTTGANTN
 A C G T A C G T A C G T A C G T C T G A A C T G A C G T C G T A A G T C A G T C A G C T A C G T A C T G C G T A A C G T A C G T A C G T
C A G T G T A C T C A G A G T C C G T A A G C T T C A G G C T A G A T C G T A C A G C T G A C T A T C G T C G A G T C A C A G T G T C A

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:5
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:AGTACCTTGA-
-TGACCTTGAV
 C T G A A C T G A C G T C G T A A G T C A G T C A G C T A C G T A C T G C G T A A C G T
A C G T G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A

Esrrg/MA0643.1/Jaspar

Match Rank:6
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:AGTACCTTGA
ATGACCTTGA
 C T G A A C T G A C G T C G T A A G T C A G T C A G C T A C G T A C T G C G T A
C G T A G A C T T C A G G T C A T A G C G T A C A G C T G A C T A T C G C T G A

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:7
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:AGTACCTTGA---
-GWAAYHTGABMC
 C T G A A C T G A C G T C G T A A G T C A G T C A G C T A C G T A C T G C G T A A C G T A C G T A C G T
A C G T A C T G C G A T G T C A C G T A A G T C G T A C G C A T A C T G C G T A A C G T G T A C G A T C

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:8
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:AGTACCTTGA-
-TGACCTTGAN
 C T G A A C T G A C G T C G T A A G T C A G T C A G C T A C G T A C T G C G T A A C G T
A C G T G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A

Mouse_Recombination_Hotspot(Zf)/Testis-DMC1-ChIP-Seq(GSE24438)/Homer

Match Rank:9
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--AGTACCTTGA--------
GAAGTANCACGAATNMRAGT
 A C G T A C G T C T G A A C T G A C G T C G T A A G T C A G T C A G C T A C G T A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G C T G A C T G A C T A G G A C T C T G A T A C G A G T C G C T A G A T C C T A G T C G A T G C A G A C T A C G T G T C A T C A G C T G A C A T G G A C T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.64
Offset:0
Orientation:forward strand
Alignment:AGTACCTTGA
NTGACCTTGA
 C T G A A C T G A C G T C G T A A G T C A G T C A G C T A C G T A C T G C G T A
C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A