Information for 23-AAAAGGTTCTTT (Motif 20)

C G T A G T C A C G T A G T C A A C T G T C A G A G C T A C G T A G T C A C G T C G A T G A C T
Reverse Opposite:
C T G A C G T A C G T A A C T G G T C A T C G A A G T C G T A C A C G T G C A T A C G T C G A T
p-value:1e-21
log p-value:-4.998e+01
Information Content per bp:1.763
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif0.16%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets10.9 +/- 2.1bp
Average Position of motif in Background12.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.51
Offset:0
Orientation:forward strand
Alignment:AAAAGGTTCTTT
AAGATATCCTT-
 C G T A G T C A C G T A G T C A A C T G T C A G A G C T A C G T A G T C A C G T C G A T G A C T
G C T A G C T A T C A G C G T A A C G T C T G A C G A T A T G C G A T C G C A T A G C T A C G T

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:2
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:AAAAGGTTCTTT
-NRRGGGTCTT-
 C G T A G T C A C G T A G T C A A C T G T C A G A G C T A C G T A G T C A C G T C G A T G A C T
A C G T A C T G T C G A C T A G A C T G A C T G A C T G A C G T A G T C A C G T A G C T A C G T

Nr2e3/MA0164.1/Jaspar

Match Rank:3
Score:0.50
Offset:1
Orientation:forward strand
Alignment:AAAAGGTTCTTT
-CAAGCTT----
 C G T A G T C A C G T A G T C A A C T G T C A G A G C T A C G T A G T C A C G T C G A T G A C T
A C G T G A T C C G T A C G T A A T C G A G T C A C G T A C G T A C G T A C G T A C G T A C G T

PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer

Match Rank:4
Score:0.50
Offset:-4
Orientation:reverse strand
Alignment:----AAAAGGTTCTTT
GAACADWATGTTCTT-
 A C G T A C G T A C G T A C G T C G T A G T C A C G T A G T C A A C T G T C A G A G C T A C G T A G T C A C G T C G A T G A C T
C T A G C G T A C G T A A G T C C G T A C A G T C G T A G T C A C G A T A C T G A C G T G C A T A G T C G A C T G C A T A C G T

PH0005.1_Barhl1/Jaspar

Match Rank:5
Score:0.50
Offset:-5
Orientation:reverse strand
Alignment:-----AAAAGGTTCTTT
GNNTTAATTGGTTGTT-
 A C G T A C G T A C G T A C G T A C G T C G T A G T C A C G T A G T C A A C T G T C A G A G C T A C G T A G T C A C G T C G A T G A C T
C A T G G C T A T G C A G A C T C G A T C G T A C G T A C G A T A G C T C T A G T A C G G A C T A G C T C A T G G A C T C A G T A C G T

PB0083.1_Tcf7_1/Jaspar

Match Rank:6
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:AAAAGGTTCTTT--------
---NNTTCCTTTGATCTNNA
 C G T A G T C A C G T A G T C A A C T G T C A G A G C T A C G T A G T C A C G T C G A T G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G A T C G A T C A G T A G C T A G T C A G T C G C A T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T T G C A

HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer

Match Rank:7
Score:0.50
Offset:-4
Orientation:forward strand
Alignment:----AAAAGGTTCTTT
TTCTAGAABNTTCTA-
 A C G T A C G T A C G T A C G T C G T A G T C A C G T A G T C A A C T G T C A G A G C T A C G T A G T C A C G T C G A T G A C T
G A C T A G C T G T A C G A C T C T G A A C T G G T C A C T G A A T G C T A C G G A C T A C G T A G T C G A C T C T G A A C G T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:8
Score:0.49
Offset:2
Orientation:forward strand
Alignment:AAAAGGTTCTTT--
--AGGVNCCTTTGT
 C G T A G T C A C G T A G T C A A C T G T C A G A G C T A C G T A G T C A C G T C G A T G A C T A C G T A C G T
A C G T A C G T C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T

PB0182.1_Srf_2/Jaspar

Match Rank:9
Score:0.49
Offset:1
Orientation:reverse strand
Alignment:AAAAGGTTCTTT------
-NNNNTTTTTTTTTNAAC
 C G T A G T C A C G T A G T C A A C T G T C A G A G C T A C G T A G T C A C G T C G A T G A C T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G A T C G T A T C G A A C G T C A G T C A G T C A G T C G A T A C G T A C G T A C G T G A C T G A C T G C A T G C T A T G C A A T G C

SCRT1/MA0743.1/Jaspar

Match Rank:10
Score:0.49
Offset:-4
Orientation:forward strand
Alignment:----AAAAGGTTCTTT
GAGCAACAGGTGGTT-
 A C G T A C G T A C G T A C G T C G T A G T C A C G T A G T C A A C T G T C A G A G C T A C G T A G T C A C G T C G A T G A C T
T C A G G C T A A C T G G A T C G T C A C G T A G T A C C G T A C T A G A C T G A G C T C A T G A C T G A G C T G A C T A C G T