Information for 20-TTACCCAAACAA (Motif 17)

A C G T A C G T C G T A A G T C A G T C A G T C C G T A C G T A C G T A A G T C C G T A C G T A
Reverse Opposite:
A C G T A C G T A C T G A C G T A C G T A C G T A C T G A C T G A C T G A C G T C G T A C G T A
p-value:1e-25
log p-value:-5.851e+01
Information Content per bp:1.530
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif0.18%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets9.1 +/- 3.0bp
Average Position of motif in Background9.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0121.1_Foxj3_2/Jaspar

Match Rank:1
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-TTACCCAAACAA----
AACACCAAAACAAAGGA
 A C G T A C G T A C G T C G T A A G T C A G T C A G T C C G T A C G T A C G T A A G T C C G T A C G T A A C G T A C G T A C G T A C G T
G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A

PH0026.1_Duxbl/Jaspar

Match Rank:2
Score:0.70
Offset:0
Orientation:forward strand
Alignment:TTACCCAAACAA-----
CGACCCAATCAACGGTG
 A C G T A C G T C G T A A G T C A G T C A G T C C G T A C G T A C G T A A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A G T C C T A G C T G A A G T C A G T C A G T C G T C A G T C A A G C T A G T C C G T A C T G A A G T C T A C G T C A G G C A T T A C G

PB0123.1_Foxl1_2/Jaspar

Match Rank:3
Score:0.65
Offset:0
Orientation:forward strand
Alignment:TTACCCAAACAA----
ATATCAAAACAAAACA
 A C G T A C G T C G T A A G T C A G T C A G T C C G T A C G T A C G T A A G T C C G T A C G T A A C G T A C G T A C G T A C G T
G C T A C G A T C G T A C G A T G A T C G C T A G C T A G T C A C G T A A G T C C G T A C G T A G T C A C G T A G T A C G T C A

POL004.1_CCAAT-box/Jaspar

Match Rank:4
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TTACCCAAACAA
ACTAGCCAATCA-
 A C G T A C G T A C G T C G T A A G T C A G T C A G T C C G T A C G T A C G T A A G T C C G T A C G T A
G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A A C G T

MF0011.1_HMG_class/Jaspar

Match Rank:5
Score:0.60
Offset:7
Orientation:reverse strand
Alignment:TTACCCAAACAA-
-------AACAAT
 A C G T A C G T C G T A A G T C A G T C A G T C C G T A C G T A C G T A A G T C C G T A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A C G T A G A T C C T G A T G C A C G A T

FOXC2/MA0846.1/Jaspar

Match Rank:6
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TTACCCAAACAA-
-TAAGTAAACAAA
 A C G T A C G T C G T A A G T C A G T C A G T C C G T A C G T A C G T A A G T C C G T A C G T A A C G T
A C G T G C A T C T G A G C T A T C A G G A C T G T C A G T C A C T G A A G T C C T G A G C T A G C T A

Sox5/MA0087.1/Jaspar

Match Rank:7
Score:0.60
Offset:6
Orientation:reverse strand
Alignment:TTACCCAAACAA-
------NAACAAT
 A C G T A C G T C G T A A G T C A G T C A G T C C G T A C G T A C G T A A G T C C G T A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C A T C G T A C T G A A G T C C G T A G T C A A C G T

SRY/MA0084.1/Jaspar

Match Rank:8
Score:0.59
Offset:4
Orientation:forward strand
Alignment:TTACCCAAACAA-
----GTAAACAAT
 A C G T A C G T C G T A A G T C A G T C A G T C C G T A C G T A C G T A A G T C C G T A C G T A A C G T
A C G T A C G T A C G T A C G T A C T G C G A T C G T A C G T A C G T A A G T C C G T A C T G A C G A T

PB0035.1_Irf5_1/Jaspar

Match Rank:9
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--TTACCCAAACAA-
ATAAACCGAAACCAA
 A C G T A C G T A C G T A C G T C G T A A G T C A G T C A G T C C G T A C G T A C G T A A G T C C G T A C G T A A C G T
C G T A C G A T C T G A C G T A C T G A G A T C G A T C C T A G C T G A C G T A C G T A T A G C G A T C C T G A T C G A

PB0167.1_Sox13_2/Jaspar

Match Rank:10
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TTACCCAAACAA---
ANNTNCCCACCCANNAC
 A C G T A C G T A C G T A C G T C G T A A G T C A G T C A G T C C G T A C G T A C G T A A G T C C G T A C G T A A C G T A C G T A C G T
G T C A C G T A C G A T C G A T C G T A G T A C G T A C T A G C C G T A G A T C G T A C G T A C C T G A C T G A G A C T G C T A G A T C