Information for 17-CTCCAAGACACT (Motif 14)

A G T C A G C T A T G C A G T C G T C A C T G A A C T G C T G A A G T C G T C A A G T C C G A T
Reverse Opposite:
C G T A A C T G A C G T C T A G A G C T A G T C A G C T A C G T A C T G T A C G C T G A A C T G
p-value:1e-29
log p-value:-6.726e+01
Information Content per bp:1.844
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif0.20%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets9.3 +/- 2.7bp
Average Position of motif in Background13.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:1
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:CTCCAAGACACT---
-----MRSCACTYAA
 A G T C A G C T A T G C A G T C G T C A C T G A A C T G C T G A A G T C G T C A A G T C C G A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:2
Score:0.56
Offset:5
Orientation:forward strand
Alignment:CTCCAAGACACT---
-----AASCACTCAA
 A G T C A G C T A T G C A G T C G T C A C T G A A C T G C T G A A G T C G T C A A G T C C G A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:3
Score:0.55
Offset:5
Orientation:forward strand
Alignment:CTCCAAGACACT---
-----AAGCACTTAA
 A G T C A G C T A T G C A G T C G T C A C T G A A C T G C T G A A G T C G T C A A G T C C G A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A T C G A T A C G G A T C G T C A G T A C C G A T A G C T G T C A T G C A

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:CTCCAAGACACT
---CCAGACAG-
 A G T C A G C T A T G C A G T C G T C A C T G A A C T G C T G A A G T C G T C A A G T C C G A T
A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:5
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CTCCAAGACACT---
CAAATCCAGACATCACA
 A C G T A C G T A G T C A G C T A T G C A G T C G T C A C T G A A C T G C T G A A G T C G T C A A G T C C G A T A C G T A C G T A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:6
Score:0.54
Offset:6
Orientation:forward strand
Alignment:CTCCAAGACACT----
------RSCACTYRAG
 A G T C A G C T A T G C A G T C G T C A C T G A A C T G C T G A A G T C G T C A A G T C C G A T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G T A C G A G T C C G T A A G T C A C G T A G T C T C G A C G T A T A C G

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:7
Score:0.53
Offset:4
Orientation:forward strand
Alignment:CTCCAAGACACT--
----AAGACCCYYN
 A G T C A G C T A T G C A G T C G T C A C T G A A C T G C T G A A G T C G T C A A G T C C G A T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A T G C A A C T G G T C A A G T C A G T C A G T C A G T C A G C T T G A C

NKX2-8/MA0673.1/Jaspar

Match Rank:8
Score:0.52
Offset:7
Orientation:forward strand
Alignment:CTCCAAGACACT----
-------CCACTTGAA
 A G T C A G C T A T G C A G T C G T C A C T G A A C T G C T G A A G T C G T C A A G T C C G A T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C G A T C G T C A G A T C A G C T G A C T T A C G G C T A T C G A

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:CTCCAAGACACT-
---CCAGACRSVB
 A G T C A G C T A T G C A G T C G T C A C T G A A C T G C T G A A G T C G T C A A G T C C G A T A C G T
A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--CTCCAAGACACT
AGGTGHCAGACA--
 A C G T A C G T A G T C A G C T A T G C A G T C G T C A C T G A A C T G C T G A A G T C G T C A A G T C C G A T
C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A A C G T A C G T