Information for 13-AGGAGATTACCT (Motif 11)

C G T A A C T G A C T G C G T A C T A G C T G A A C G T A G C T C G T A A G T C A G T C A C G T
Reverse Opposite:
C G T A A C T G A C T G A C G T C T G A C G T A A G C T A G T C A C G T A G T C A G T C A C G T
p-value:1e-33
log p-value:-7.622e+01
Information Content per bp:1.928
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif0.22%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets10.5 +/- 2.6bp
Average Position of motif in Background5.4 +/- 0.4bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:1
Score:0.71
Offset:1
Orientation:forward strand
Alignment:AGGAGATTACCT
-GGAAATTCCC-
 C G T A A C T G A C T G C G T A C T A G C T G A A C G T A G C T C G T A A G T C A G T C A C G T
A C G T A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C A C G T

PH0053.1_Hoxa6/Jaspar

Match Rank:2
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---AGGAGATTACCT-
NTNAGGTAATTACCTT
 A C G T A C G T A C G T C G T A A C T G A C T G C G T A C T A G C T G A A C G T A G C T C G T A A G T C A G T C A C G T A C G T
G T C A C G A T C A G T C T G A C T A G A C T G G A C T G T C A G C T A C A G T C A G T C T G A G T A C G A T C C A G T A G C T

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:3
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---AGGAGATTACCT
NACAGGAAAT-----
 A C G T A C G T A C G T C G T A A C T G A C T G C G T A C T A G C T G A A C G T A G C T C G T A A G T C A G T C A C G T
T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T A C G T A C G T A C G T

PB0012.1_Elf3_1/Jaspar

Match Rank:4
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----AGGAGATTACCT
AACAAGGAAGTAA---
 A C G T A C G T A C G T A C G T C G T A A C T G A C T G C G T A C T A G C T G A A C G T A G C T C G T A A G T C A G T C A C G T
C G A T C G T A G T A C T G C A T G C A C T A G C A T G C G T A G C T A T C A G G A C T C G T A T C G A A C G T A C G T A C G T

RELA/MA0107.1/Jaspar

Match Rank:5
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:AGGAGATTACCT
-GGAAATTCCC-
 C G T A A C T G A C T G C G T A C T A G C T G A A C G T A G C T C G T A A G T C A G T C A C G T
A C G T A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C A C G T

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:6
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:AGGAGATTACCT-
--NNACTTACCTN
 C G T A A C T G A C T G C G T A C T A G C T G A A C G T A G C T C G T A A G T C A G T C A C G T A C G T
A C G T A C G T C T G A G A C T G C T A G A T C G C A T G A C T C G T A A G T C G A T C G C A T A C T G

PH0121.1_Obox1/Jaspar

Match Rank:7
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---AGGAGATTACCT--
TTAAGGGGATTAACTAC
 A C G T A C G T A C G T C G T A A C T G A C T G C G T A C T A G C T G A A C G T A G C T C G T A A G T C A G T C A C G T A C G T A C G T
C A G T C G A T T C G A T C G A C T A G C T A G C T A G A C T G G T C A A G C T G A C T C G T A C G T A G T A C C G A T G C T A A G T C

ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer

Match Rank:8
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---AGGAGATTACCT
ANCAGGAAGT-----
 A C G T A C G T A C G T C G T A A C T G A C T G C G T A C T A G C T G A A C G T A G C T C G T A A G T C A G T C A C G T
C G T A T G A C T A G C T G C A A C T G A C T G C G T A C G T A T C A G G A C T A C G T A C G T A C G T A C G T A C G T

MF0003.1_REL_class/Jaspar

Match Rank:9
Score:0.59
Offset:1
Orientation:forward strand
Alignment:AGGAGATTACCT
-GGGGATTTCC-
 C G T A A C T G A C T G C G T A C T A G C T G A A C G T A G C T C G T A A G T C A G T C A C G T
A C G T A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C A C G T

PH0139.1_Pitx3/Jaspar

Match Rank:10
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AGGAGATTACCT---
AGGGGGATTAGCTGCC
 A C G T C G T A A C T G A C T G C G T A C T A G C T G A A C G T A G C T C G T A A G T C A G T C A C G T A C G T A C G T A C G T
T C G A C T A G T A C G C T A G C T A G A C T G G T C A A G C T G A C T C G T A C A T G A T G C A C G T C T A G A T G C A T G C