Information for 11-CCCTGAGCTATT (Motif 10)

A G T C G T A C G A T C C A G T A C T G C T G A A C T G G T A C A G C T C G T A G A C T A C G T
Reverse Opposite:
C G T A C T G A G C A T C T G A A C T G A G T C A G C T A G T C G C T A C T A G C A T G T A C G
p-value:1e-37
log p-value:-8.567e+01
Information Content per bp:1.758
Number of Target Sequences with motif27.0
Percentage of Target Sequences with motif0.29%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets10.2 +/- 2.6bp
Average Position of motif in Background10.3 +/- 2.7bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CCCTGAGCTATT
--CGGAGC----
 A G T C G T A C G A T C C A G T A C T G C T G A A C T G G T A C A G C T C G T A G A C T A C G T
A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CCCTGAGCTATT
WDNCTGGGCA---
 A C G T A G T C G T A C G A T C C A G T A C T G C T G A A C T G G T A C A G C T C G T A G A C T A C G T
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:3
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---CCCTGAGCTATT
TGACCTTGACCT---
 A C G T A C G T A C G T A G T C G T A C G A T C C A G T A C T G C T G A A C T G G T A C A G C T C G T A G A C T A C G T
G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:4
Score:0.57
Offset:4
Orientation:forward strand
Alignment:CCCTGAGCTATT
----CAGCC---
 A G T C G T A C G A T C C A G T A C T G C T G A A C T G G T A C A G C T C G T A G A C T A C G T
A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T

RORA(var.2)/MA0072.1/Jaspar

Match Rank:5
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:CCCTGAGCTATT----
--TTGACCTANTTATN
 A G T C G T A C G A T C C A G T A C T G C T G A A C T G G T A C A G C T C G T A G A C T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A G C T A C G T A C T G C G T A A G T C A G T C A G C T C G T A T A G C C G A T A C G T G C T A G C A T C G T A

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:6
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:CCCTGAGCTATT-
---TGACCTARTT
 A G T C G T A C G A T C C A G T A C T G C T G A A C T G G T A C A G C T C G T A G A C T A C G T A C G T
A C G T A C G T A C G T A G C T C T A G T C G A A G T C A T G C A G C T T G C A T C A G G C A T C G A T

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:7
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---CCCTGAGCTATT
TGACCTTGACCT---
 A C G T A C G T A C G T A G T C G T A C G A T C C A G T A C T G C T G A A C T G G T A C A G C T C G T A G A C T A C G T
G A C T T C A G T G C A A G T C A G T C G A C T A C G T T A C G C G T A G T A C G A T C G A C T A C G T A C G T A C G T

RORA/MA0071.1/Jaspar

Match Rank:8
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:CCCTGAGCTATT-
---TGACCTTGAT
 A G T C G T A C G A T C C A G T A C T G C T G A A C T G G T A C A G C T C G T A G A C T A C G T A C G T
A C G T A C G T A C G T A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T

FOSL2/MA0478.1/Jaspar

Match Rank:9
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:CCCTGAGCTATT-
--NTGAGTCATCN
 A G T C G T A C G A T C C A G T A C T G C T G A A C T G G T A C A G C T C G T A G A C T A C G T A C G T
A C G T A C G T T G C A A C G T A C T G C G T A T A C G A G C T A G T C C G T A G A C T A G T C T G A C

PB0051.1_Osr2_1/Jaspar

Match Rank:10
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:CCCTGAGCTATT------
--CNNNGCTACTGTANNN
 A G T C G T A C G A T C C A G T A C T G C T G A A C T G G T A C A G C T C G T A G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G A T C C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C A T G A C G T C G T A A G T C C G T A C G A T